RchiOBHm_Chr4g0431191

Acyl-protein thioesterase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
55481778 .. 55483198
1421 bp
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UTR
Exon/CDS
Intron
PRQ39989

Sequence Viewer

Length: 249 bp
ATGTGTTTGGCTTCATCTCACTTAGATGGCGAGACTGAAACCTCAGATCTAGACGAAAGCTGGTTCCAGCTCTTGGAAACTCTCCCCCTTCCAAATGTAAGAATGACTACATCTACTCTATTGGAAGTTGAATGTTCTCATGTTAGCCATACTTATAATATTGTGATGGAGATTAAATGGATTTGTCCAACCGCTCCTATTAAACCAATTTCAGGTTTTGGTGGTTTTCCTTCCATTAATTGCTTGTAA

Protein Analysis

82

Amino Acids

9.1

Weight (kDa)

4.51

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 156
AccB7I CCANNNNNTGG 1 cut(s) 73
AccBSI CCGCTC 1 cut(s) 194
AciI CCGC 1 cut(s) 192
AfiI CCNNNNNNNGG 2 cut(s) 73, 212
AgsI TTSAA 1 cut(s) 131
AluBI AGCT 2 cut(s) 60, 70
AluI AGCT 2 cut(s) 60, 70
Alw26I GTCTC 1 cut(s) 26
AseI ATTAAT 1 cut(s) 237
BccI CCATC 2 cut(s) 20, 160
BcoDI GTCTC 1 cut(s) 26
BfaI CTAG 1 cut(s) 50
BglII AGATCT 1 cut(s) 46
BmiI GGNNCC 1 cut(s) 65
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 212
BseLI CCNNNNNNNGG 2 cut(s) 73, 212
BseMII CTCAG 1 cut(s) 57
BslI CCNNNNNNNGG 2 cut(s) 73, 212
BsmAI GTCTC 1 cut(s) 26
Bsp143I GATC 1 cut(s) 46
BspACI CCGC 1 cut(s) 192
BspCNI CTCAG 1 cut(s) 56
BspLI GGNNCC 1 cut(s) 65
BsrBI CCGCTC 1 cut(s) 194
BssMI GATC 1 cut(s) 46
BstDEI CTNAG 2 cut(s) 22, 43
BstKTI GATC 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 1 cut(s) 46
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
CviAII CATG 1 cut(s) 140
CviJI RGCY 4 cut(s) 11, 60, 70, 147
CviKI_1 RGCY 4 cut(s) 11, 60, 70, 147
DdeI CTNAG 2 cut(s) 22, 43
DpnI GATC 1 cut(s) 48
DpnII GATC 1 cut(s) 46
FaeI CATG 1 cut(s) 143
FaiI YATR 3 cut(s) 141, 150, 156
FatI CATG 1 cut(s) 139
FspBI CTAG 1 cut(s) 50
Hin1II CATG 1 cut(s) 143
Hpy188I TCNGA 1 cut(s) 46
Hpy188III TCNNGA 1 cut(s) 50
HpyAV CCTTC 2 cut(s) 98, 240
HpyF3I CTNAG 2 cut(s) 22, 43
Hsp92II CATG 1 cut(s) 143
Kzo9I GATC 1 cut(s) 46
LmnI GCTCC 1 cut(s) 199
LpnPI CCDG 3 cut(s) 46, 80, 198
MaeI CTAG 1 cut(s) 50
MalI GATC 1 cut(s) 48
MbiI CCGCTC 1 cut(s) 194
MboI GATC 1 cut(s) 46
MflI RGATCY 1 cut(s) 46
MluCI AATT 2 cut(s) 207, 238
MmeI TCCRAC 1 cut(s) 212
MnlI CCTC 1 cut(s) 52
MseI TTAA 3 cut(s) 174, 201, 237
MslI CAYNNNNRTG 1 cut(s) 24
NdeII GATC 1 cut(s) 46
NlaIII CATG 1 cut(s) 143
NlaIV GGNNCC 1 cut(s) 65
PflMI CCANNNNNTGG 1 cut(s) 73
PshBI ATTAAT 1 cut(s) 237
PsiI TTATAA 1 cut(s) 156
PspN4I GGNNCC 1 cut(s) 65
PsuI RGATCY 1 cut(s) 46
RseI CAYNNNNRTG 1 cut(s) 24
SaqAI TTAA 3 cut(s) 174, 201, 237
Sau3AI GATC 1 cut(s) 46
SetI ASST 4 cut(s) 44, 62, 72, 217
SgeI CNNG 7 cut(s) 43, 62, 73, 79, 85, 152, 225
SmiMI CAYNNNNRTG 1 cut(s) 24
Sse9I AATT 2 cut(s) 207, 238
SsiI CCGC 1 cut(s) 192
SspI AATATT 1 cut(s) 160
SspMI CTAG 1 cut(s) 50
TasI AATT 2 cut(s) 207, 238
Tru1I TTAA 3 cut(s) 174, 201, 237
Tru9I TTAA 3 cut(s) 174, 201, 237
Van91I CCANNNNNTGG 1 cut(s) 73
VspI ATTAAT 1 cut(s) 237
XbaI TCTAGA 1 cut(s) 49
XspI CTAG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.