Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002475

Physical Location & Seq

Genomic Coordinates Reverse (-)

20676092 .. 20679082

Gene Structure 2991 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G239700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGTTGATGCAGGCATGACCATGTCCTTCCACACACAAAATCGCCCACCTCTTCTTCCTGGAGTTGCAACGAAAAACAGGTCTCACAGCAGAACCAAATCAAGCCCATCTGTAGCTGTTGTGCAAGTATCTTCAGTCCTGCAAACCAACGAGAGTGGAAATCTGCCTGAATCTAAGAGATCAAGCATGCCTCTAACAAGATTCCAAGCCCCCAACTACATACTCAGCCAGCCAAACACAGTTGGTATCATTGGAGGGGTGTCTGTTTTTTCAAGTCTGCTTTTCTTGGAGAAGCTTGTCTGGTGGAGTCTAAAAGATGGAGGAGAATGCCCACCTTTCGTTGTGTGCAGTGATCCAACACTATATAAAGAGCTTCCAATTCGTAGCTTGTTTCATTCATTCACAAGATCAAGAGCTAGTGCTCAAATCCTATCCAACAATTGGCCCATCATTGAGAGCTTGTGCCGTAAACGGGCATTCCTTGAGCACTCTGGAGCTCGCTGCATAGTCATGCCATGCCATCTGTCTCATGCGTGGCACGACCAGATTTCTGAGGACTGTTCGTTGCTCTTCCTTCACGTCGGCGAGTGTGTTGCTCGGGAGCTCAGGGAAGCAAAGCTGAAGCCACTGGAGAATGGAAGTAATGTAAGGATTGGGGTGCTTGCTGCTGATGCAACTTTAATGGCTGGATTTTACCAGGAAAAGCTACAAAGTCAGGGGTTTGAGGTTGTGGTACCTGACAAAGAAACCATGGAACATGTTGTGATTCCTGCAGTCGAAGCAATGAAAAGGAGGGACATGGAAGGGGCACGAAATCTCTTAAGAATTGCAGTGCAGGTTCTGTTGGTGAGGGCGGTGAACACCGTGATCATTGCTTCTGATGAACTGCAGGGTGTTCTGCCTCGTGATGATCCTCTTCTTAAGAAATGTATTGACCCCATGGATGCTTTGGCGAGGTCAACCATAAAATGGGCAAATGCTACAGGAAATGGTGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asp_Glu_race

Protein Analysis

333

Amino Acids

36.58

Weight (kDa)

8.61

Isoelectric Point (pI)

47.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002475)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15410 AT1G15410
fragaria_vesca	FvH4_1g03590 FvH4_1g03590 FvH4_6g30270 FvH4_6g30270 FvH4_6g30270 FvH4_6g30270 FvH4_6g30270 FvH4_6g30270 FvH4_6g30270
malus_domestica	MD02G1035500.v1.1 MD17G1205400.v1.1 MD17G1205900.v1.1
prunus_persica	Prupe.3G081000_v2.0.a1 Prupe.7G239700_v2.0.a1 Prupe.7G239700_v2.0.a1
pyrus_communis	pycom02g02920 pycom17g20920
rosa_chinensis	RchiOBHm_Chr2g0089121 RchiOBHm_Chr2g0136511
rosa_laevigata	RLG00000015993 RLG00000019538
rosa_multiflora	Rmu_sc0012034.1_g000001 Rmu_sc0016750.1_g000005 Rmu_sc0035394.1_g000001
rosa_roxburghii	Rroxscaffold_2G00108210 Rroxscaffold_2G00152230
rosa_rugosa	Rorug01G0487500 Rorug02G0331500 Rorug02G0331600
rosa_samantha	Rh2AG043100 Rh2AG382400 Rh2BG041600 Rh2BG389000 Rh2CG043300 Rh2CG368700 Rh2DG042300 Rh2DG405700
rosa_wichuraiana	Rw2G003450 Rw2G031250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	826
Acc65I	GGTACC	1 cut(s)	733
AccB1I	GGYRCC	1 cut(s)	733
AccB7I	CCANNNNNTGG	2 cut(s)	441, 969
AciI	CCGC	1 cut(s)	854
AclWI	GGATC	2 cut(s)	347, 905
AcuI	CTGAAG	2 cut(s)	117, 641
AfaI	GTAC	1 cut(s)	735
AfiI	CCNNNNNNNGG	3 cut(s)	441, 472, 969
AflII	CTTAAG	2 cut(s)	820, 920
AflIII	ACRYGT	1 cut(s)	757
AgsI	TTSAA	1 cut(s)	273
AjiI	CACGTC	1 cut(s)	580
AjnI	CCWGG	2 cut(s)	58, 696
Alw21I	GWGCWC	4 cut(s)	424, 489, 499, 606
Alw26I	GTCTC	2 cut(s)	87, 531
AlwI	GGATC	2 cut(s)	347, 905
AlwNI	CAGNNNCTG	1 cut(s)	841
Ama87I	CYCGRG	1 cut(s)	597
AoxI	GGCC	1 cut(s)	443
ApeKI	GCWGC	2 cut(s)	501, 665
ArsI	GACNNNNNNTTYG	2 cut(s)	65, 97
Asp718I	GGTACC	1 cut(s)	733
AspS9I	GGNCC	1 cut(s)	444
AsuHPI	GGTGA	2 cut(s)	859, 868
AvaI	CYCGRG	1 cut(s)	597
BaeGI	GKGCMC	1 cut(s)	811
BanI	GGYRCC	1 cut(s)	733
BanII	GRGCYC	2 cut(s)	499, 606
BauI	CACGAG	1 cut(s)	903
Bbv12I	GWGCWC	4 cut(s)	424, 489, 499, 606
BbvI	GCAGC	2 cut(s)	488, 652
BccI	CCATC	4 cut(s)	115, 311, 455, 528
BceAI	ACGGC	1 cut(s)	450
BcgI	CGANNNNNNTGC	2 cut(s)	575, 609
BciT130I	CCWGG	2 cut(s)	60, 698
BclI	TGATCA	1 cut(s)	867
BcoDI	GTCTC	2 cut(s)	87, 531
BfaI	CTAG	1 cut(s)	417
BfmI	CTRYAG	4 cut(s)	111, 771, 887, 981
BfrI	CTTAAG	2 cut(s)	820, 920
BfuAI	ACCTGC	1 cut(s)	826
BisI	GCNGC	2 cut(s)	502, 666
BlsI	GCNGC	2 cut(s)	503, 667
Bme1390I	CCNGG	2 cut(s)	60, 698
BmeT110I	CYCGRG	1 cut(s)	597
BmgBI	CACGTC	1 cut(s)	580
BmgT120I	GGNCC	1 cut(s)	444
BmiI	GGNNCC	1 cut(s)	735
BmrFI	CCNGG	2 cut(s)	60, 698
BmsI	GCATC	2 cut(s)	661, 934
BpmI	CTGGAG	3 cut(s)	81, 513, 650
Bpu10I	CCTNAGC	1 cut(s)	605
BpuEI	CTTGAG	1 cut(s)	503
BsaI	GGTCTC	1 cut(s)	87
BsaJI	CCNNGG	2 cut(s)	750, 939
Bsc4I	CCNNNNNNNGG	3 cut(s)	441, 472, 969
Bse1I	ACTGG	1 cut(s)	633
Bse3DI	GCAATG	2 cut(s)	789, 870
BseBI	CCWGG	2 cut(s)	60, 698
BseDI	CCNNGG	2 cut(s)	750, 939
BseGI	GGATG	1 cut(s)	949
BseLI	CCNNNNNNNGG	3 cut(s)	441, 472, 969
BseMI	GCAATG	2 cut(s)	789, 870
BseMII	CTCAG	3 cut(s)	238, 543, 619
BseNI	ACTGG	1 cut(s)	633
BseRI	GAGGAG	1 cut(s)	336
BseSI	GKGCMC	1 cut(s)	811
BseXI	GCAGC	2 cut(s)	488, 652
BsgI	GTGCAG	2 cut(s)	367, 854
BshFI	GGCC	1 cut(s)	445
BshNI	GGYRCC	1 cut(s)	733
BsiHKAI	GWGCWC	4 cut(s)	424, 489, 499, 606
BsiHKCI	CYCGRG	1 cut(s)	597
BslFI	GGGAC	1 cut(s)	809
BslI	CCNNNNNNNGG	3 cut(s)	441, 472, 969
BsmAI	GTCTC	2 cut(s)	87, 531
BsmFI	GGGAC	1 cut(s)	809
BsmI	GAATGC	2 cut(s)	332, 476
BsnI	GGCC	1 cut(s)	445
Bso31I	GGTCTC	1 cut(s)	87
BsoBI	CYCGRG	1 cut(s)	597
Bsp1286I	GDGCHC	5 cut(s)	424, 489, 499, 606, 811
Bsp143I	GATC	5 cut(s)	179, 352, 407, 867, 910
Bsp19I	CCATGG	2 cut(s)	750, 939
BspACI	CCGC	1 cut(s)	854
BspANI	GGCC	1 cut(s)	445
BspCNI	CTCAG	3 cut(s)	237, 544, 618
BspLI	GGNNCC	1 cut(s)	735
BspMAI	CTGCAG	2 cut(s)	775, 891
BspMI	ACCTGC	1 cut(s)	826
BspPI	GGATC	2 cut(s)	347, 905
BspQI	GCTCTTC	1 cut(s)	575
BspT107I	GGYRCC	1 cut(s)	733
BspTI	CTTAAG	2 cut(s)	820, 920
BspTNI	GGTCTC	1 cut(s)	87
BsrDI	GCAATG	2 cut(s)	789, 870
BsrI	ACTGG	1 cut(s)	633
BssECI	CCNNGG	2 cut(s)	750, 939
BssMI	GATC	5 cut(s)	179, 352, 407, 867, 910
BssSI	CACGAG	1 cut(s)	903
BssT1I	CCWWGG	2 cut(s)	750, 939
Bst2BI	CACGAG	1 cut(s)	903
Bst2UI	CCWGG	2 cut(s)	60, 698
Bst4CI	ACNGT	3 cut(s)	241, 560, 865
Bst6I	CTCTTC	3 cut(s)	57, 575, 921
BstAFI	CTTAAG	2 cut(s)	820, 920
BstC8I	GCNNGC	5 cut(s)	13, 188, 230, 499, 663
BstDEI	CTNAG	4 cut(s)	174, 224, 552, 605
BstDSI	CCRYGG	2 cut(s)	750, 939
BstF5I	GGATG	1 cut(s)	949
BstKTI	GATC	5 cut(s)	182, 355, 410, 870, 913
BstMAI	GTCTC	2 cut(s)	87, 531
BstMBI	GATC	5 cut(s)	179, 352, 407, 867, 910
BstMWI	GCNNNNNNNGC	2 cut(s)	671, 779
BstNI	CCWGG	2 cut(s)	60, 698
BstNSI	RCATGY	2 cut(s)	190, 761
BstSCI	CCNGG	2 cut(s)	58, 696
BstSFI	CTRYAG	4 cut(s)	111, 771, 887, 981
BstSLI	GKGCMC	1 cut(s)	811
BstV1I	GCAGC	2 cut(s)	488, 652
BsuRI	GGCC	1 cut(s)	445
BtgI	CCRYGG	2 cut(s)	750, 939
BtrI	CACGTC	1 cut(s)	580
BtsCI	GGATG	1 cut(s)	949
BtsI	GCAGTG	2 cut(s)	355, 837
BtsIMutI	CAGTG	3 cut(s)	355, 626, 837
BveI	ACCTGC	1 cut(s)	826
Cac8I	GCNNGC	5 cut(s)	13, 188, 230, 499, 663
CaiI	CAGNNNCTG	1 cut(s)	841
Cfr13I	GGNCC	1 cut(s)	444
Csp6I	GTAC	1 cut(s)	734
CspCI	CAANNNNNGTGG	2 cut(s)	136, 171
CviQI	GTAC	1 cut(s)	734
DdeI	CTNAG	4 cut(s)	174, 224, 552, 605
DpnI	GATC	5 cut(s)	181, 354, 409, 869, 912
DpnII	GATC	5 cut(s)	179, 352, 407, 867, 910
Eam1104I	CTCTTC	3 cut(s)	57, 575, 921
EarI	CTCTTC	3 cut(s)	57, 575, 921
Ecl136II	GAGCTC	2 cut(s)	497, 604
Eco130I	CCWWGG	2 cut(s)	750, 939
Eco24I	GRGCYC	2 cut(s)	499, 606
Eco31I	GGTCTC	1 cut(s)	87
Eco53kI	GAGCTC	2 cut(s)	497, 604
Eco57I	CTGAAG	2 cut(s)	117, 641
Eco88I	CYCGRG	1 cut(s)	597
EcoICRI	GAGCTC	2 cut(s)	497, 604
EcoRII	CCWGG	2 cut(s)	58, 696
EcoT14I	CCWWGG	2 cut(s)	750, 939
EcoT38I	GRGCYC	2 cut(s)	499, 606
ErhI	CCWWGG	2 cut(s)	750, 939
FaqI	GGGAC	1 cut(s)	809
FbaI	TGATCA	1 cut(s)	867
Fnu4HI	GCNGC	2 cut(s)	502, 666
FokI	GGATG	1 cut(s)	956
FriOI	GRGCYC	2 cut(s)	499, 606
Fsp4HI	GCNGC	2 cut(s)	502, 666
FspBI	CTAG	1 cut(s)	417
GluI	GCNGC	2 cut(s)	502, 666
GsuI	CTGGAG	3 cut(s)	81, 513, 650
HaeIII	GGCC	1 cut(s)	445
HincII	GTYRAC	1 cut(s)	960
HindII	GTYRAC	1 cut(s)	960
HindIII	AAGCTT	1 cut(s)	293
HinfI	GANTC	4 cut(s)	170, 201, 307, 766
HphI	GGTGA	2 cut(s)	859, 868
Hpy166II	GTNNAC	3 cut(s)	470, 859, 960
Hpy188I	TCNGA	2 cut(s)	553, 880
Hpy188III	TCNNGA	4 cut(s)	411, 492, 599, 905
Hpy8I	GTNNAC	3 cut(s)	470, 859, 960
Hpy99I	CGWCG	1 cut(s)	584
HpyAV	CCTTC	3 cut(s)	37, 584, 797
HpyCH4III	ACNGT	3 cut(s)	241, 560, 865
HpyCH4IV	ACGT	1 cut(s)	579
HpyF10VI	GCNNNNNNNGC	2 cut(s)	671, 779
HpyF3I	CTNAG	4 cut(s)	174, 224, 552, 605
HpySE526I	ACGT	1 cut(s)	579
KpnI	GGTACC	1 cut(s)	737
Ksp22I	TGATCA	1 cut(s)	867
Kzo9I	GATC	5 cut(s)	179, 352, 407, 867, 910
LguI	GCTCTTC	1 cut(s)	575
LmnI	GCTCC	2 cut(s)	494, 601
Lsp1109I	GCAGC	2 cut(s)	488, 652
LweI	GCATC	2 cut(s)	661, 934
MaeI	CTAG	1 cut(s)	417
MaeII	ACGT	1 cut(s)	579
MalI	GATC	5 cut(s)	181, 354, 409, 869, 912
MboI	GATC	5 cut(s)	179, 352, 407, 867, 910
MboII	GAAGA	5 cut(s)	44, 47, 123, 562, 908
MfeI	CAATTG	1 cut(s)	439
MhlI	GDGCHC	5 cut(s)	424, 489, 499, 606, 811
MluCI	AATT	3 cut(s)	378, 439, 825
MlyI	GAGTC	1 cut(s)	316
MmeI	TCCRAC	2 cut(s)	380, 459
MseI	TTAA	3 cut(s)	680, 821, 921
MslI	CAYNNNNRTG	2 cut(s)	20, 509
MspCI	CTTAAG	2 cut(s)	820, 920
MspR9I	CCNGG	2 cut(s)	60, 698
MunI	CAATTG	1 cut(s)	439
Mva1269I	GAATGC	2 cut(s)	332, 476
MvaI	CCWGG	2 cut(s)	60, 698
MwoI	GCNNNNNNNGC	2 cut(s)	671, 779
NcoI	CCATGG	2 cut(s)	750, 939
NdeII	GATC	5 cut(s)	179, 352, 407, 867, 910
NlaIV	GGNNCC	1 cut(s)	735
NspI	RCATGY	2 cut(s)	190, 761
PaeI	GCATGC	1 cut(s)	190
PciI	ACATGT	1 cut(s)	757
PciSI	GCTCTTC	1 cut(s)	575
PctI	GAATGC	2 cut(s)	332, 476
PfeI	GAWTC	3 cut(s)	170, 201, 766
PflFI	GACNNNGTC	1 cut(s)	22
PflMI	CCANNNNNTGG	2 cut(s)	441, 969
PfoI	TCCNGGA	1 cut(s)	58
PkrI	GCNGC	2 cut(s)	503, 667
PleI	GAGTC	1 cut(s)	315
PpsI	GAGTC	1 cut(s)	315
PscI	ACATGT	1 cut(s)	757
Psp124BI	GAGCTC	2 cut(s)	499, 606
Psp6I	CCWGG	2 cut(s)	58, 696
PspGI	CCWGG	2 cut(s)	58, 696
PspN4I	GGNNCC	1 cut(s)	735
PspPI	GGNCC	1 cut(s)	444
PstI	CTGCAG	2 cut(s)	775, 891
PstNI	CAGNNNCTG	1 cut(s)	841
PsyI	GACNNNGTC	1 cut(s)	22
RsaI	GTAC	1 cut(s)	735
RsaNI	GTAC	1 cut(s)	734
RseI	CAYNNNNRTG	2 cut(s)	20, 509
SacI	GAGCTC	2 cut(s)	499, 606
SapI	GCTCTTC	1 cut(s)	575
SaqAI	TTAA	3 cut(s)	680, 821, 921
SatI	GCNGC	2 cut(s)	502, 666
Sau3AI	GATC	5 cut(s)	179, 352, 407, 867, 910
Sau96I	GGNCC	1 cut(s)	444
SchI	GAGTC	1 cut(s)	316
ScrFI	CCNGG	2 cut(s)	60, 698
SduI	GDGCHC	5 cut(s)	424, 489, 499, 606, 811
SfaNI	GCATC	2 cut(s)	661, 934
SfcI	CTRYAG	4 cut(s)	111, 771, 887, 981
SmiMI	CAYNNNNRTG	2 cut(s)	20, 509
SmlI	CTYRAG	3 cut(s)	482, 820, 920
SmoI	CTYRAG	3 cut(s)	482, 820, 920
SphI	GCATGC	1 cut(s)	190
Sse9I	AATT	3 cut(s)	378, 439, 825
SsiI	CCGC	1 cut(s)	854
SspMI	CTAG	1 cut(s)	417
SstI	GAGCTC	2 cut(s)	499, 606
StyD4I	CCNGG	2 cut(s)	58, 696
StyI	CCWWGG	2 cut(s)	750, 939
TaaI	ACNGT	3 cut(s)	241, 560, 865
TaiI	ACGT	1 cut(s)	582
TaqI	TCGA	1 cut(s)	777
TasI	AATT	3 cut(s)	378, 439, 825
TfiI	GAWTC	3 cut(s)	170, 201, 766
Tru1I	TTAA	3 cut(s)	680, 821, 921
Tru9I	TTAA	3 cut(s)	680, 821, 921
TscAI	CASTG	3 cut(s)	355, 633, 837
TseI	GCWGC	2 cut(s)	501, 665
TspDTI	ATGAA	4 cut(s)	383, 387, 800, 897
TspRI	CASTG	3 cut(s)	355, 633, 837
Tth111I	GACNNNGTC	1 cut(s)	22
Van91I	CCANNNNNTGG	2 cut(s)	441, 969
Vha464I	CTTAAG	2 cut(s)	820, 920
XceI	RCATGY	2 cut(s)	190, 761
XcmI	CCANNNNNNNNNTGG	1 cut(s)	946
XspI	CTAG	1 cut(s)	417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.