Rh2CG368700

Asp/Glu/Hydantoin racemase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002475
Physical Location & Seq
Forward (+)
50108655 .. 50117518
8864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG368700.1

Sequence Viewer

Length: 699 bp
ATGACAACTTCTTTTCACACTTTGAACTATCCTTTCCACAAATTGTGCTCTGTAAATACGCATAAAACCCTCTACAAGACAAGGTGGAATCAGGGTTTAGCTCTAGCTCTATCCCCAGTTCTCTTGCAAACTAGGAAGTTTCCAGAGTATAAGAAGAATTCTGGTTCGAGTACCGCATGCAGCACTTCTTTTCTGGGTCAACCAAATACAATTGGTATAATTGGAGGGAAATCTGTCGATTCTACTGTTATTTTTCTGAAAAAACTAGTTCACTGGAGTAAGAATGGAGAAAGTTGCCCTCCTTTTATTCTATGCTCTGATCCTGTGTTAAATAAAGAGCTGTTATTGACAGAGAGAAGCTCCTTACCTTGGCTTGACAGTAAAAATGAACGAACTAAACTTGATCCTACTTCAGTTGTGGAGAATCTGAGGAGTAAGAGGATTTATCTTGAAAATTCTGGTGCTCGTTGCATAGTAATGCCCTGTCATATTTCACATTCTTGGCATAATCAAATATCTGATGGATGTTCTGTTCCTTTCCTCCATATGGGTGAGTGTGTTGCCAAGGAGCTCAAGGAAGCAGAGTTGAAGCCACTTGAAGCCAGGAGTCCTTTGCGGATTGGAGTGCTTGCTACAAATGCAACTTTGACGGCAGGATTCTATCAGGAGAAACTGAAAAGGGAGGTAATCTTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Asp_Glu_race

Protein Analysis

232

Amino Acids

25.99

Weight (kDa)

9.22

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp_Glu_race PF01177 125 - 227 1.5e-11 Asp/Glu/Hydantoin racemase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 174, 616
AclWI GGATC 2 cut(s) 314, 398
AcsI RAATTY 2 cut(s) 157, 454
AcuI CTGAAG 1 cut(s) 396
AfaI GTAC 1 cut(s) 172
AfiI CCNNNNNNNGG 2 cut(s) 369, 547
AgsI TTSAA 4 cut(s) 25, 452, 589, 599
AhlI ACTAGT 1 cut(s) 265
AjnI CCWGG 1 cut(s) 602
AloI GAACNNNNNNTCC 2 cut(s) 516, 548
AluBI AGCT 5 cut(s) 101, 107, 340, 360, 571
AluI AGCT 5 cut(s) 101, 107, 340, 360, 571
Alw21I GWGCWC 3 cut(s) 50, 466, 573
AlwI GGATC 2 cut(s) 314, 398
ApeKI GCWGC 1 cut(s) 180
ApoI RAATTY 2 cut(s) 157, 454
AsuHPI GGTGA 1 cut(s) 563
BanII GRGCYC 1 cut(s) 573
Bbv12I GWGCWC 3 cut(s) 50, 466, 573
BbvI GCAGC 1 cut(s) 192
BccI CCATC 1 cut(s) 515
BceAI ACGGC 1 cut(s) 666
BciT130I CCWGG 1 cut(s) 604
BcuI ACTAGT 1 cut(s) 265
BfaI CTAG 3 cut(s) 104, 132, 266
BisI GCNGC 1 cut(s) 181
BlsI GCNGC 1 cut(s) 182
Bme1390I CCNGG 1 cut(s) 604
BmrFI CCNGG 1 cut(s) 604
BmrI ACTGGG 1 cut(s) 110
BmuI ACTGGG 1 cut(s) 110
BplI GAGNNNNNCTC 2 cut(s) 344, 376
BpmI CTGGAG 1 cut(s) 295
BpuEI CTTGAG 1 cut(s) 557
BsaJI CCNNGG 2 cut(s) 368, 564
Bsc4I CCNNNNNNNGG 2 cut(s) 369, 547
Bse1I ACTGG 2 cut(s) 116, 278
BseBI CCWGG 1 cut(s) 604
BseDI CCNNGG 2 cut(s) 368, 564
BseGI GGATG 1 cut(s) 530
BseLI CCNNNNNNNGG 2 cut(s) 369, 547
BseMII CTCAG 1 cut(s) 419
BseNI ACTGG 2 cut(s) 116, 278
BseRI GAGGAG 1 cut(s) 445
BseXI GCAGC 1 cut(s) 192
BsiHKAI GWGCWC 3 cut(s) 50, 466, 573
BslI CCNNNNNNNGG 2 cut(s) 369, 547
Bsp1286I GDGCHC 3 cut(s) 50, 466, 573
Bsp143I GATC 2 cut(s) 319, 403
BspACI CCGC 2 cut(s) 174, 616
BspCNI CTCAG 1 cut(s) 420
BspPI GGATC 2 cut(s) 314, 398
BsrI ACTGG 2 cut(s) 116, 278
BssECI CCNNGG 2 cut(s) 368, 564
BssMI GATC 2 cut(s) 319, 403
BssT1I CCWWGG 2 cut(s) 368, 564
Bst2UI CCWGG 1 cut(s) 604
Bst4CI ACNGT 2 cut(s) 247, 380
BstC8I GCNNGC 2 cut(s) 178, 630
BstDEI CTNAG 1 cut(s) 428
BstF5I GGATG 1 cut(s) 530
BstKTI GATC 2 cut(s) 322, 406
BstMBI GATC 2 cut(s) 319, 403
BstMWI GCNNNNNNNGC 1 cut(s) 638
BstNI CCWGG 1 cut(s) 604
BstNSI RCATGY 1 cut(s) 180
BstSCI CCNGG 1 cut(s) 602
BstV1I GCAGC 1 cut(s) 192
BtsCI GGATG 1 cut(s) 530
BtsIMutI CAGTG 1 cut(s) 271
Cac8I GCNNGC 2 cut(s) 178, 630
Csp6I GTAC 1 cut(s) 171
CviAII CATG 1 cut(s) 177
CviJI RGCY 8 cut(s) 101, 107, 340, 360, 373, 571, 592, 602
CviKI_1 RGCY 8 cut(s) 101, 107, 340, 360, 373, 571, 592, 602
CviQI GTAC 1 cut(s) 171
DdeI CTNAG 1 cut(s) 428
DpnI GATC 2 cut(s) 321, 405
DpnII GATC 2 cut(s) 319, 403
Ecl136II GAGCTC 1 cut(s) 571
Eco130I CCWWGG 2 cut(s) 368, 564
Eco24I GRGCYC 1 cut(s) 573
Eco53kI GAGCTC 1 cut(s) 571
Eco57I CTGAAG 1 cut(s) 396
EcoICRI GAGCTC 1 cut(s) 571
EcoRI GAATTC 1 cut(s) 157
EcoRII CCWGG 1 cut(s) 602
EcoT14I CCWWGG 2 cut(s) 368, 564
EcoT38I GRGCYC 1 cut(s) 573
ErhI CCWWGG 2 cut(s) 368, 564
FaeI CATG 1 cut(s) 180
FatI CATG 1 cut(s) 176
FauNDI CATATG 1 cut(s) 546
Fnu4HI GCNGC 1 cut(s) 181
FokI GGATG 1 cut(s) 537
FriOI GRGCYC 1 cut(s) 573
Fsp4HI GCNGC 1 cut(s) 181
FspBI CTAG 3 cut(s) 104, 132, 266
GluI GCNGC 1 cut(s) 181
GsuI CTGGAG 1 cut(s) 295
Hin1II CATG 1 cut(s) 180
HincII GTYRAC 1 cut(s) 200
HindII GTYRAC 1 cut(s) 200
HinfI GANTC 5 cut(s) 88, 239, 424, 607, 657
HphI GGTGA 1 cut(s) 563
Hpy166II GTNNAC 2 cut(s) 200, 271
Hpy188I TCNGA 4 cut(s) 258, 319, 429, 520
Hpy188III TCNNGA 3 cut(s) 143, 449, 665
Hpy8I GTNNAC 2 cut(s) 200, 271
HpyCH4III ACNGT 2 cut(s) 247, 380
HpyCH4V TGCA 4 cut(s) 127, 180, 471, 641
HpyF10VI GCNNNNNNNGC 1 cut(s) 638
HpyF3I CTNAG 1 cut(s) 428
Hsp92II CATG 1 cut(s) 180
Kzo9I GATC 2 cut(s) 319, 403
LmnI GCTCC 2 cut(s) 365, 568
Lsp1109I GCAGC 1 cut(s) 192
MaeI CTAG 3 cut(s) 104, 132, 266
MalI GATC 2 cut(s) 321, 405
MboI GATC 2 cut(s) 319, 403
MboII GAAGA 2 cut(s) 166, 682
MfeI CAATTG 1 cut(s) 210
MhlI GDGCHC 3 cut(s) 50, 466, 573
MluCI AATT 5 cut(s) 41, 157, 210, 219, 454
MlyI GAGTC 1 cut(s) 616
MnlI CCTC 7 cut(s) 80, 218, 309, 423, 432, 551, 676
MseI TTAA 1 cut(s) 329
MslI CAYNNNNRTG 2 cut(s) 476, 549
MspR9I CCNGG 1 cut(s) 604
MunI CAATTG 1 cut(s) 210
MvaI CCWGG 1 cut(s) 604
MwoI GCNNNNNNNGC 1 cut(s) 638
NdeI CATATG 1 cut(s) 546
NdeII GATC 2 cut(s) 319, 403
NlaIII CATG 1 cut(s) 180
NspI RCATGY 1 cut(s) 180
PaeI GCATGC 1 cut(s) 180
PfeI GAWTC 4 cut(s) 88, 239, 424, 657
PkrI GCNGC 1 cut(s) 182
PleI GAGTC 1 cut(s) 615
PpsI GAGTC 1 cut(s) 615
Psp124BI GAGCTC 1 cut(s) 573
Psp6I CCWGG 1 cut(s) 602
PspGI CCWGG 1 cut(s) 602
RsaI GTAC 1 cut(s) 172
RsaNI GTAC 1 cut(s) 171
RseI CAYNNNNRTG 2 cut(s) 476, 549
SacI GAGCTC 1 cut(s) 573
SaqAI TTAA 1 cut(s) 329
SatI GCNGC 1 cut(s) 181
Sau3AI GATC 2 cut(s) 319, 403
SchI GAGTC 1 cut(s) 616
ScrFI CCNGG 1 cut(s) 604
SduI GDGCHC 3 cut(s) 50, 466, 573
SetI ASST 8 cut(s) 86, 103, 109, 342, 362, 370, 573, 687
SmiMI CAYNNNNRTG 2 cut(s) 476, 549
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
SpeI ACTAGT 1 cut(s) 265
SphI GCATGC 1 cut(s) 180
Sse9I AATT 5 cut(s) 41, 157, 210, 219, 454
SsiI CCGC 2 cut(s) 174, 616
SspMI CTAG 3 cut(s) 104, 132, 266
SstI GAGCTC 1 cut(s) 573
StyD4I CCNGG 1 cut(s) 602
StyI CCWWGG 2 cut(s) 368, 564
TaaI ACNGT 2 cut(s) 247, 380
TaqI TCGA 2 cut(s) 167, 237
TasI AATT 5 cut(s) 41, 157, 210, 219, 454
TfiI GAWTC 4 cut(s) 88, 239, 424, 657
Tru1I TTAA 1 cut(s) 329
Tru9I TTAA 1 cut(s) 329
TscAI CASTG 1 cut(s) 278
TseI GCWGC 1 cut(s) 180
TspDTI ATGAA 1 cut(s) 402
TspRI CASTG 1 cut(s) 278
XapI RAATTY 2 cut(s) 157, 454
XceI RCATGY 1 cut(s) 180
XspI CTAG 3 cut(s) 104, 132, 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.