Rorug02G0331500

Asp/Glu/Hydantoin racemase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002475
Physical Location & Seq
Reverse (-)
41094637 .. 41109696
15060 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0331500.1

Sequence Viewer

Length: 1998 bp
ATGGCGGGGCCGTTGCTTCGCTCTCTCTGGTCCTCTACGCGTAACACTCTCTCCTCTTCCTCCTCCAAACCCTACCTTCGTCCCTCCGCACTCGCCCGCACCTTCTCGGCGGCCACCGCGGCCACCGATGCTACTCTACAGAGGAGCAGCCTGCTCGACCCGGCCCGCCTCCGCAACGTGGCGGTCATAGCGCACGTTGACCACGGCAAGACCACCCTCATGGACCGCCTCCTTCGCCAGTGCGGCGCCGACATCCCCCACGAACGCGCCATGGATTCCATCAGCCTCGAGCGCGAGCGCGGCATCACTATCGCCTCCAAGGTTACGTCGGTTTTCTGGAAGGAGAATGAGCTAAACATGGTTGATACGCCTGGACATGCAGACTTTGGTGGTGAAGTTGAGCGGGTTGTCGGTATGGTTGAGGGGGCAGTTTTAGTTGTTGATGCCGGGGAAGGTCCGCTTGCACAGACCAAGTTTGTGCTTGCCAAAGCCTTAAAATATGGGCTGCGTCCTATTCTTCTTCTAAACAAAGTAGATCGGCCTGCAGTTTCTGAGGAGATGTGCGATGAAGTTGAGAGTCTGGTATTTGATCTTTTTGCAAATCTCGGTGCTACAGAGGAGCAGCTGGATTTTCCTGTGCTATATGCTTCTGCTAAAGAAGGATGGGCCTCGGCTACTTTCACTAAAGAACCTCCTGCTGATTCAAGAAACATGTCGCAGCTGCTTGATGCTATTATCAGACATGTTCCCCCACCAAGTGCAAACGTTGAGGCACCTTTCCAGATGCTGGTTTCCATGATGGAAAAGGACTTCTACCTTGGGCGAATATTGACTGGACGGGTTTCTTCTGGCTGTGTTCGCGTTGGTGATAGAGTTCATGGGCTTCGTAACAAAGATTCTGGAGTTGAGAAAATTGAAGAAGGGAAGGTTGTGAAACTGATGAAAAAGAAGGGAACAAATATGGTTCTCATTGACAGTGCTGGAGCTGGTGACATAATATCAATGGCTGGGTTAGCAAGTCCATCTATTGGCCATACAGTCACTAGCGTTGAGGTAATGACTGCATTACCAACCGTTGAGTTGGATCCACCAACTATTTCCATGACTTTTGGTGTAAATGACTCTCCATTAGCTGGCCGTGATGGTAGCCATCTGACCGGAGGAAAGATCGGGGATCGGCTATCAGCTGAAGCAGAAACAAATCTTGCTATTAATGTCCTCCCAGGCTTATCAGAGTCATTTGAAGTTCAGGGGAGGGGAGAACTGCAACTCGGGATATTAATTGAGAATATGAGGCGTGAAGGCTTTGAGCTCTCTGTGTCACCACCCAAAGTCATGTATAAAACAGAGAATGGTCAAAGGCTCGAGCCAATTGAAGAAGTTACTATAGAGGTAAATGAAGACCATGTGGGGTTAGTTATGGAAGCCTTATCTCATAGGCGAGCTGAGGTTCTTGACATGGGTCCTGTTCCAGGAAATGATGGCAGGACTAGATTGTCTTTGACATGTCCATCCAGGGGACTGGTTGGTTACAGAAGTGTATTTAGCAGTGCCACGCGTGGAACTGGGTTTATGCATCGTGCTTTCTTAACATATGAAAAATTTCGAGGTCCTCTTGGAAATGTGCGGAAAGGGGTTTTGGTGTCAATGGGCTATGGTACAATCACATCCTATGCATTAATGAGTTTAGAACCTCGTGGAACTCTATTTGTGACACCTGGTATGGAGACATATGATGGCATGATTGTTGGTGAACATTCGAGGGAGACGGATCTAGATGTCAACCCAGTAAGGAACAAAGAACTTACAAATATTCGTTCTGCTGGCAAGGATGAAAATGTGAAACTATCTCCTCCTCGCCTTATGACTCTTGAAGAAGCCATAGGGTATGTAGCCTCGGATGAGCTCATTGAGGTTACACCGAAGTCCATCCGGTTACGGAAGAAATATCTGGATGTCAACAAGCGTAAAACCATGAGCAAAAGGCAAAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Asp_Glu_race

Protein Analysis

665

Amino Acids

72.47

Weight (kDa)

6.26

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 56 - 251 3.8e-53 Elongation factor Tu GTP binding domain
EF-G_D2 PF22042 259 - 349 1.3e-07 Elongation factor G domain 2
GTP_EFTU_D2 PF03144 274 - 348 1.7e-08 Elongation factor Tu domain 2
EFG_C PF00679 455 - 537 1e-19 Elongation factor G C-terminus
BipA_C PF21018 544 - 652 3.4e-45 TypA/BipA C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1495
AccB1I GGYRCC 2 cut(s) 245, 772
AccB7I CCANNNNNTGG 3 cut(s) 787, 1028, 1133
AccBSI CCGCTC 1 cut(s) 403
AccII CGCG 7 cut(s) 40, 119, 267, 294, 300, 861, 1558
AclI AACGTT 1 cut(s) 765
AclWI GGATC 4 cut(s) 1079, 1092, 1182, 1779
AcoI YGGCCR 4 cut(s) 111, 120, 1030, 1135
AcsI RAATTY 1 cut(s) 1601
AcuI CTGAAG 1 cut(s) 1209
AcyI GRCGYC 1 cut(s) 246
AdeI CACNNNGTG 1 cut(s) 758
AfaI GTAC 1 cut(s) 1660
AfiI CCNNNNNNNGG 6 cut(s) 178, 787, 1028, 1133, 1472, 1517
AflIII ACRYGT 5 cut(s) 38, 711, 742, 1505, 1556
AgsI TTSAA 5 cut(s) 705, 917, 1244, 1376, 1874
AjnI CCWGG 5 cut(s) 370, 1222, 1471, 1514, 1717
AjuI GAANNNNNNNTTGG 2 cut(s) 1622, 1654
AluBI AGCT 9 cut(s) 352, 625, 721, 986, 1133, 1187, 1312, 1445, 1906
AluI AGCT 9 cut(s) 352, 625, 721, 986, 1133, 1187, 1312, 1445, 1906
Alw21I GWGCWC 2 cut(s) 1314, 1908
Alw26I GTCTC 2 cut(s) 1721, 1760
AlwI GGATC 4 cut(s) 1079, 1092, 1182, 1779
AlwNI CAGNNNCTG 2 cut(s) 551, 787
Ama87I CYCGRG 3 cut(s) 287, 1271, 1364
AoxI GGCC 8 cut(s) 8, 111, 120, 162, 539, 666, 1030, 1135
ApeKI GCWGC 5 cut(s) 147, 505, 622, 718, 721
ApoI RAATTY 1 cut(s) 1601
AseI ATTAAT 3 cut(s) 1212, 1280, 1679
Asp700I GAANNNNTTC 1 cut(s) 1602
AspLEI GCGC 5 cut(s) 193, 248, 269, 294, 300
AspS9I GGNCC 8 cut(s) 8, 30, 163, 223, 455, 666, 1463, 1610
AsuC2I CCSGG 2 cut(s) 161, 448
AsuHPI GGTGA 5 cut(s) 404, 878, 1001, 1314, 1763
AvaI CYCGRG 3 cut(s) 287, 1271, 1364
AvaII GGWCC 5 cut(s) 30, 223, 455, 1463, 1610
BalI TGGCCA 1 cut(s) 1032
BamHI GGATCC 1 cut(s) 1084
BanI GGYRCC 2 cut(s) 245, 772
BanII GRGCYC 2 cut(s) 1314, 1908
BauI CACGAG 1 cut(s) 1695
BbsI GAAGAC 1 cut(s) 1407
Bbv12I GWGCWC 2 cut(s) 1314, 1908
BbvCI CCTCAGC 1 cut(s) 1446
BbvI GCAGC 5 cut(s) 159, 492, 634, 708, 730
BceAI ACGGC 2 cut(s) 220, 1122
BcgI CGANNNNNNTGC 4 cut(s) 136, 170, 292, 326
BciT130I CCWGG 5 cut(s) 372, 1224, 1473, 1516, 1719
BcnI CCSGG 2 cut(s) 161, 448
BcoDI GTCTC 2 cut(s) 1721, 1760
BfaI CTAG 3 cut(s) 1044, 1491, 1775
BfmI CTRYAG 4 cut(s) 137, 543, 612, 1386
BfoI RGCGCY 1 cut(s) 249
BglI GCCNNNNNGGC 2 cut(s) 119, 243
BisI GCNGC 9 cut(s) 111, 120, 148, 244, 301, 506, 623, 719, 722
BlsI GCNGC 9 cut(s) 112, 121, 149, 245, 302, 507, 624, 720, 723
Bme1390I CCNGG 7 cut(s) 161, 372, 448, 1224, 1473, 1516, 1719
Bme18I GGWCC 5 cut(s) 30, 223, 455, 1463, 1610
BmeT110I CYCGRG 3 cut(s) 287, 1271, 1364
BmgT120I GGNCC 8 cut(s) 8, 30, 163, 223, 455, 666, 1463, 1610
BmiI GGNNCC 5 cut(s) 9, 247, 774, 1086, 1464
BmrFI CCNGG 7 cut(s) 161, 372, 448, 1224, 1473, 1516, 1719
BmrI ACTGGG 2 cut(s) 1575, 1781
BmsI GCATC 6 cut(s) 118, 312, 433, 718, 774, 1585
BmuI ACTGGG 2 cut(s) 1575, 1781
BoxI GACNNNNGTC 1 cut(s) 1461
BpiI GAAGAC 1 cut(s) 1407
BpmI CTGGAG 2 cut(s) 921, 1002
Bpu10I CCTNAGC 1 cut(s) 1446
BpuMI CCSGG 2 cut(s) 161, 448
BsaHI GRCGYC 1 cut(s) 246
BsaWI WCCGGW 2 cut(s) 1157, 1932
BsaXI ACNNNNNCTCC 2 cut(s) 35, 65
Bsc4I CCNNNNNNNGG 6 cut(s) 178, 787, 1028, 1133, 1472, 1517
Bse1I ACTGG 5 cut(s) 238, 838, 1527, 1570, 1787
BseBI CCWGG 5 cut(s) 372, 1224, 1473, 1516, 1719
BseGI GGATG 8 cut(s) 252, 668, 1511, 1667, 1837, 1906, 1929, 1960
BseLI CCNNNNNNNGG 6 cut(s) 178, 787, 1028, 1133, 1472, 1517
BseMII CTCAG 2 cut(s) 543, 1437
BseNI ACTGG 5 cut(s) 238, 838, 1527, 1570, 1787
BseRI GAGGAG 7 cut(s) 43, 52, 157, 569, 632, 1842, 1845
BseXI GCAGC 5 cut(s) 159, 492, 634, 708, 730
BseYI CCCAGC 1 cut(s) 1007
Bsh1236I CGCG 7 cut(s) 40, 119, 267, 294, 300, 861, 1558
BshFI GGCC 8 cut(s) 10, 113, 122, 164, 541, 668, 1032, 1137
BshNI GGYRCC 2 cut(s) 245, 772
BsiHKAI GWGCWC 2 cut(s) 1314, 1908
BsiHKCI CYCGRG 3 cut(s) 287, 1271, 1364
BsiSI CCGG 4 cut(s) 161, 447, 1158, 1933
BslFI GGGAC 2 cut(s) 66, 1533
BslI CCNNNNNNNGG 6 cut(s) 178, 787, 1028, 1133, 1472, 1517
BsmAI GTCTC 2 cut(s) 1721, 1760
BsmBI CGTCTC 1 cut(s) 1760
BsmFI GGGAC 2 cut(s) 66, 1533
BsnI GGCC 8 cut(s) 10, 113, 122, 164, 541, 668, 1032, 1137
BsoBI CYCGRG 3 cut(s) 287, 1271, 1364
Bsp1286I GDGCHC 2 cut(s) 1314, 1908
Bsp143I GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
Bsp19I CCATGG 1 cut(s) 270
BspANI GGCC 8 cut(s) 10, 113, 122, 164, 541, 668, 1032, 1137
BspCNI CTCAG 2 cut(s) 544, 1438
BspFNI CGCG 7 cut(s) 40, 119, 267, 294, 300, 861, 1558
BspLI GGNNCC 5 cut(s) 9, 247, 774, 1086, 1464
BspMAI CTGCAG 1 cut(s) 547
BspPI GGATC 4 cut(s) 1079, 1092, 1182, 1779
BspT107I GGYRCC 2 cut(s) 245, 772
BsrBI CCGCTC 1 cut(s) 403
BsrI ACTGG 5 cut(s) 238, 838, 1527, 1570, 1787
BssMI GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
BssNI GRCGYC 1 cut(s) 246
BssSI CACGAG 1 cut(s) 1695
BssT1I CCWWGG 3 cut(s) 270, 318, 817
Bst2BI CACGAG 1 cut(s) 1695
Bst2UI CCWGG 5 cut(s) 372, 1224, 1473, 1516, 1719
Bst4CI ACNGT 3 cut(s) 977, 1039, 1075
Bst6I CTCTTC 1 cut(s) 61
BstACI GRCGYC 1 cut(s) 246
BstDEI CTNAG 2 cut(s) 552, 1446
BstDSI CCRYGG 3 cut(s) 117, 202, 270
BstENI CCTNNNNNAGG 1 cut(s) 1470
BstF5I GGATG 8 cut(s) 252, 668, 1511, 1667, 1837, 1906, 1929, 1960
BstFNI CGCG 7 cut(s) 40, 119, 267, 294, 300, 861, 1558
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 5 cut(s) 193, 248, 269, 294, 300
BstKTI GATC 6 cut(s) 538, 592, 1087, 1170, 1177, 1774
BstMAI GTCTC 2 cut(s) 1721, 1760
BstMBI GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
BstNI CCWGG 5 cut(s) 372, 1224, 1473, 1516, 1719
BstNSI RCATGY 4 cut(s) 380, 715, 746, 1509
BstPAI GACNNNNGTC 1 cut(s) 1461
BstSCI CCNGG 7 cut(s) 159, 370, 446, 1222, 1471, 1514, 1717
BstSFI CTRYAG 4 cut(s) 137, 543, 612, 1386
BstUI CGCG 7 cut(s) 40, 119, 267, 294, 300, 861, 1558
BstV1I GCAGC 5 cut(s) 159, 492, 634, 708, 730
BstV2I GAAGAC 1 cut(s) 1407
BstX2I RGATCY 2 cut(s) 1084, 1771
BstXI CCANNNNNNTGG 2 cut(s) 220, 1522
BstYI RGATCY 2 cut(s) 1084, 1771
BsuRI GGCC 8 cut(s) 10, 113, 122, 164, 541, 668, 1032, 1137
BtgI CCRYGG 3 cut(s) 117, 202, 270
BtgZI GCGATG 1 cut(s) 579
BtsCI GGATG 8 cut(s) 252, 668, 1511, 1667, 1837, 1906, 1929, 1960
BtsI GCAGTG 1 cut(s) 1555
BtsIMutI CAGTG 3 cut(s) 245, 982, 1555
CaiI CAGNNNCTG 2 cut(s) 551, 787
CfoI GCGC 5 cut(s) 193, 248, 269, 294, 300
Cfr13I GGNCC 8 cut(s) 8, 30, 163, 223, 455, 666, 1463, 1610
Cfr42I CCGCGG 1 cut(s) 120
CseI GACGC 1 cut(s) 497
CsiI ACCWGGT 1 cut(s) 1717
Csp6I GTAC 1 cut(s) 1659
CviQI GTAC 1 cut(s) 1659
DdeI CTNAG 2 cut(s) 552, 1446
DinI GGCGCC 1 cut(s) 247
DpnI GATC 6 cut(s) 537, 591, 1086, 1169, 1176, 1773
DpnII GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
DraIII CACNNNGTG 1 cut(s) 758
DrdI GACNNNNNNGTC 1 cut(s) 1495
DseDI GACNNNNNNGTC 1 cut(s) 1495
EaeI YGGCCR 4 cut(s) 111, 120, 1030, 1135
Eam1104I CTCTTC 1 cut(s) 61
EarI CTCTTC 1 cut(s) 61
Ecl136II GAGCTC 2 cut(s) 1312, 1906
Eco130I CCWWGG 3 cut(s) 270, 318, 817
Eco24I GRGCYC 2 cut(s) 1314, 1908
Eco47I GGWCC 5 cut(s) 30, 223, 455, 1463, 1610
Eco53kI GAGCTC 2 cut(s) 1312, 1906
Eco57I CTGAAG 1 cut(s) 1209
Eco88I CYCGRG 3 cut(s) 287, 1271, 1364
EcoICRI GAGCTC 2 cut(s) 1312, 1906
EcoNI CCTNNNNNAGG 1 cut(s) 1470
EcoO109I RGGNCCY 2 cut(s) 1463, 1610
EcoRII CCWGG 5 cut(s) 370, 1222, 1471, 1514, 1717
EcoT14I CCWWGG 3 cut(s) 270, 318, 817
EcoT22I ATGCAT 2 cut(s) 1578, 1678
EcoT38I GRGCYC 2 cut(s) 1314, 1908
EgeI GGCGCC 1 cut(s) 247
EheI GGCGCC 1 cut(s) 247
ErhI CCWWGG 3 cut(s) 270, 318, 817
Esp3I CGTCTC 1 cut(s) 1760
FalI AAGNNNNNCTT 2 cut(s) 444, 476
FaqI GGGAC 2 cut(s) 66, 1533
FauI CCCGC 3 cut(s) 104, 173, 396
FauNDI CATATG 2 cut(s) 1594, 1732
Fnu4HI GCNGC 9 cut(s) 111, 120, 148, 244, 301, 506, 623, 719, 722
FokI GGATG 8 cut(s) 239, 675, 1498, 1654, 1844, 1913, 1916, 1967
FriOI GRGCYC 2 cut(s) 1314, 1908
Fsp4HI GCNGC 9 cut(s) 111, 120, 148, 244, 301, 506, 623, 719, 722
FspBI CTAG 3 cut(s) 1044, 1491, 1775
GlaI GCGC 5 cut(s) 192, 247, 268, 293, 299
GluI GCNGC 9 cut(s) 111, 120, 148, 244, 301, 506, 623, 719, 722
GsaI CCCAGC 1 cut(s) 1011
GsuI CTGGAG 2 cut(s) 921, 1002
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 8 cut(s) 10, 113, 122, 164, 541, 668, 1032, 1137
HapII CCGG 4 cut(s) 161, 447, 1158, 1933
HgaI GACGC 1 cut(s) 497
HhaI GCGC 5 cut(s) 193, 248, 269, 294, 300
Hin1I GRCGYC 1 cut(s) 246
Hin6I GCGC 5 cut(s) 191, 246, 267, 292, 298
HinP1I GCGC 5 cut(s) 191, 246, 267, 292, 298
HincII GTYRAC 3 cut(s) 199, 1783, 1960
HindII GTYRAC 3 cut(s) 199, 1783, 1960
HinfI GANTC 7 cut(s) 275, 577, 701, 896, 1121, 1235, 1867
HpaII CCGG 4 cut(s) 161, 447, 1158, 1933
HphI GGTGA 5 cut(s) 404, 878, 1001, 1314, 1763
Hpy166II GTNNAC 4 cut(s) 199, 1754, 1783, 1960
Hpy188I TCNGA 5 cut(s) 553, 740, 1155, 1234, 1900
Hpy188III TCNNGA 9 cut(s) 337, 705, 781, 900, 1273, 1454, 1775, 1871, 1952
Hpy8I GTNNAC 4 cut(s) 199, 1754, 1783, 1960
Hpy99I CGWCG 1 cut(s) 331
HpyCH4III ACNGT 3 cut(s) 977, 1039, 1075
HpyCH4IV ACGT 4 cut(s) 177, 195, 326, 765
HpyCH4V TGCA 9 cut(s) 380, 464, 545, 599, 761, 1064, 1267, 1576, 1676
HpyF3I CTNAG 2 cut(s) 552, 1446
HpySE526I ACGT 4 cut(s) 177, 195, 326, 765
Hsp92I GRCGYC 1 cut(s) 246
HspAI GCGC 5 cut(s) 191, 246, 267, 292, 298
KasI GGCGCC 1 cut(s) 245
KspI CCGCGG 1 cut(s) 120
Kzo9I GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
LmnI GCTCC 3 cut(s) 144, 619, 983
Lsp1109I GCAGC 5 cut(s) 159, 492, 634, 708, 730
LweI GCATC 6 cut(s) 118, 312, 433, 718, 774, 1585
MabI ACCWGGT 1 cut(s) 1717
MaeI CTAG 3 cut(s) 1044, 1491, 1775
MaeII ACGT 4 cut(s) 177, 195, 326, 765
MalI GATC 6 cut(s) 537, 591, 1086, 1169, 1176, 1773
MbiI CCGCTC 1 cut(s) 403
MboI GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
MboII GAAGA 9 cut(s) 48, 509, 512, 837, 929, 1388, 1412, 1886, 1954
MfeI CAATTG 1 cut(s) 1371
MflI RGATCY 2 cut(s) 1084, 1771
MhlI GDGCHC 2 cut(s) 1314, 1908
MlsI TGGCCA 1 cut(s) 1032
MluCI AATT 4 cut(s) 912, 1281, 1371, 1601
MluI ACGCGT 2 cut(s) 38, 1556
MluNI TGGCCA 1 cut(s) 1032
Mly113I GGCGCC 1 cut(s) 246
MlyI GAGTC 4 cut(s) 586, 1115, 1244, 1861
MmeI TCCRAC 1 cut(s) 1062
Mox20I TGGCCA 1 cut(s) 1032
Mph1103I ATGCAT 2 cut(s) 1578, 1678
MroXI GAANNNNTTC 1 cut(s) 1602
MscI TGGCCA 1 cut(s) 1032
MseI TTAA 5 cut(s) 494, 1212, 1280, 1589, 1679
MslI CAYNNNNRTG 1 cut(s) 218
Msp20I TGGCCA 1 cut(s) 1032
MspA1I CMGCKG 4 cut(s) 119, 625, 721, 1187
MspI CCGG 4 cut(s) 161, 447, 1158, 1933
MspR9I CCNGG 7 cut(s) 161, 372, 448, 1224, 1473, 1516, 1719
MunI CAATTG 1 cut(s) 1371
MvaI CCWGG 5 cut(s) 372, 1224, 1473, 1516, 1719
MvnI CGCG 7 cut(s) 40, 119, 267, 294, 300, 861, 1558
NarI GGCGCC 1 cut(s) 246
NciI CCSGG 2 cut(s) 161, 448
NcoI CCATGG 1 cut(s) 270
NdeI CATATG 2 cut(s) 1594, 1732
NdeII GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
NlaIV GGNNCC 5 cut(s) 9, 247, 774, 1086, 1464
NmeAIII GCCGAG 2 cut(s) 86, 650
NmuCI GTSAC 4 cut(s) 989, 1039, 1320, 1711
NsiI ATGCAT 2 cut(s) 1578, 1678
NspI RCATGY 4 cut(s) 380, 715, 746, 1509
PaeR7I CTCGAG 2 cut(s) 287, 1364
PciI ACATGT 3 cut(s) 711, 742, 1505
PdmI GAANNNNTTC 1 cut(s) 1602
PfeI GAWTC 3 cut(s) 275, 701, 896
PflMI CCANNNNNTGG 3 cut(s) 787, 1028, 1133
PfoI TCCNGGA 1 cut(s) 1471
PkrI GCNGC 9 cut(s) 112, 121, 149, 245, 302, 507, 624, 720, 723
PleI GAGTC 4 cut(s) 585, 1115, 1243, 1861
PluTI GGCGCC 1 cut(s) 249
PpsI GAGTC 4 cut(s) 585, 1115, 1243, 1861
PpuMI RGGWCCY 2 cut(s) 1463, 1610
PscI ACATGT 3 cut(s) 711, 742, 1505
PshAI GACNNNNGTC 1 cut(s) 1461
PshBI ATTAAT 3 cut(s) 1212, 1280, 1679
Psp124BI GAGCTC 2 cut(s) 1314, 1908
Psp1406I AACGTT 1 cut(s) 765
Psp5II RGGWCCY 2 cut(s) 1463, 1610
Psp6I CCWGG 5 cut(s) 370, 1222, 1471, 1514, 1717
PspFI CCCAGC 1 cut(s) 1007
PspGI CCWGG 5 cut(s) 370, 1222, 1471, 1514, 1717
PspN4I GGNNCC 5 cut(s) 9, 247, 774, 1086, 1464
PspPI GGNCC 8 cut(s) 8, 30, 163, 223, 455, 666, 1463, 1610
PspPPI RGGWCCY 2 cut(s) 1463, 1610
PspXI VCTCGAGB 2 cut(s) 287, 1364
PstI CTGCAG 1 cut(s) 547
PstNI CAGNNNCTG 2 cut(s) 551, 787
PsuI RGATCY 2 cut(s) 1084, 1771
PvuII CAGCTG 3 cut(s) 625, 721, 1187
RsaI GTAC 1 cut(s) 1660
RsaNI GTAC 1 cut(s) 1659
RseI CAYNNNNRTG 1 cut(s) 218
SacI GAGCTC 2 cut(s) 1314, 1908
SacII CCGCGG 1 cut(s) 120
SaqAI TTAA 5 cut(s) 494, 1212, 1280, 1589, 1679
SatI GCNGC 9 cut(s) 111, 120, 148, 244, 301, 506, 623, 719, 722
Sau3AI GATC 6 cut(s) 535, 589, 1084, 1167, 1174, 1771
Sau96I GGNCC 8 cut(s) 8, 30, 163, 223, 455, 666, 1463, 1610
SchI GAGTC 4 cut(s) 586, 1115, 1244, 1861
ScrFI CCNGG 7 cut(s) 161, 372, 448, 1224, 1473, 1516, 1719
SduI GDGCHC 2 cut(s) 1314, 1908
SexAI ACCWGGT 1 cut(s) 1717
SfaNI GCATC 6 cut(s) 118, 312, 433, 718, 774, 1585
SfcI CTRYAG 4 cut(s) 137, 543, 612, 1386
SfiI GGCCNNNNNGGCC 1 cut(s) 119
SfoI GGCGCC 1 cut(s) 247
Sfr274I CTCGAG 2 cut(s) 287, 1364
Sfr303I CCGCGG 1 cut(s) 120
SgrBI CCGCGG 1 cut(s) 120
SinI GGWCC 5 cut(s) 30, 223, 455, 1463, 1610
SlaI CTCGAG 2 cut(s) 287, 1364
SmiMI CAYNNNNRTG 1 cut(s) 218
SmlI CTYRAG 2 cut(s) 287, 1364
SmoI CTYRAG 2 cut(s) 287, 1364
Sse9I AATT 4 cut(s) 912, 1281, 1371, 1601
SspDI GGCGCC 1 cut(s) 245
SspI AATATT 2 cut(s) 828, 1813
SspMI CTAG 3 cut(s) 1044, 1491, 1775
SstI GAGCTC 2 cut(s) 1314, 1908
StyD4I CCNGG 7 cut(s) 159, 370, 446, 1222, 1471, 1514, 1717
StyI CCWWGG 3 cut(s) 270, 318, 817
TaaI ACNGT 3 cut(s) 977, 1039, 1075
TaiI ACGT 4 cut(s) 180, 198, 329, 768
TaqI TCGA 5 cut(s) 156, 288, 1365, 1606, 1760
TasI AATT 4 cut(s) 912, 1281, 1371, 1601
TauI GCSGC 4 cut(s) 113, 122, 246, 303
TfiI GAWTC 3 cut(s) 275, 701, 896
Tru1I TTAA 5 cut(s) 494, 1212, 1280, 1589, 1679
Tru9I TTAA 5 cut(s) 494, 1212, 1280, 1589, 1679
TscAI CASTG 3 cut(s) 245, 982, 1555
TseFI GTSAC 4 cut(s) 989, 1039, 1320, 1711
TseI GCWGC 5 cut(s) 147, 505, 622, 718, 721
Tsp45I GTSAC 4 cut(s) 989, 1039, 1320, 1711
TspDTI ATGAA 6 cut(s) 582, 866, 956, 1413, 1611, 1848
TspGWI ACGGA 2 cut(s) 1784, 1954
TspRI CASTG 3 cut(s) 245, 982, 1555
Van91I CCANNNNNTGG 3 cut(s) 787, 1028, 1133
VpaK11BI GGWCC 5 cut(s) 30, 223, 455, 1463, 1610
VspI ATTAAT 3 cut(s) 1212, 1280, 1679
XagI CCTNNNNNAGG 1 cut(s) 1470
XapI RAATTY 1 cut(s) 1601
XbaI TCTAGA 1 cut(s) 1774
XceI RCATGY 4 cut(s) 380, 715, 746, 1509
XhoI CTCGAG 2 cut(s) 287, 1364
XmnI GAANNNNTTC 1 cut(s) 1602
XspI CTAG 3 cut(s) 1044, 1491, 1775
Zsp2I ATGCAT 2 cut(s) 1578, 1678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.