Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007511

Physical Location & Seq

Genomic Coordinates Forward (+)

10104555 .. 10106197

Gene Structure 1643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G068600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGGCAGAAGAATTTCCTATGACGGGTGGAGATGGCCCAAACAGCTATGCCAAAAATTCTAATGCAGCGGCCAAGGCAGCAGATGGTGCAAAGGCAATGTTGGTTGCAGCAATATTCGAAAACCTTGACATTGAAACTCTGCAGTCTCGGCCAACAACATTCCGGATTGCTGATTTAGGTTGCTCTGTTGGACCTAACACATTCATTCAAGTGGACAACATAATTGATGCCGTATCTCAAAAATACCACAAGAAGAGCAAAGTCCAGTCTGCTGGTGAACTCCCAGAGTTTCAAGTATACTTTAGTGATCTGGTGTCAAATGATTTCAACTATCTCTTTTCCACTCTCCCTCGAGATAGGCAATATTTCACTGCAGGAGTTCCGGGCTCTTTCCATGGAAGACTCTTCCCTGAGGCCTCTCTTAATTTTGTTTACTCGGCATATGCTCTGCACTGGCTCTCTAAGATACCAGACGAGCTACGTGACATCAACTCACCTGCATTTAACAAGGGCAGGATTTTGTATGGCAATGCACCGTATGAAGTTGGCCAGGCATATTCAGCTCAGTATGCCAAAGACATTAAGTCTTTTTTTCATGCTCGAGGACAAGAGCTTGCTCCTGGAGGCCTCATGTTGCTTTTGATTCCAGGGCGTCCCCATGGCACGCTTCCAGCACAGAATTCTCTTGCTCCTTATTTTCAACCCTTGGAGTCTACTCTCGCTGATATGGTGAACAAGGGCTTACTAAGCGAAGATAAATTTGACTCTTTCAACTTGCCCGTCTACTGCCCATCTGTGGAGGAGTTGGGGGCACTAATAGAAGAAACTGGGTGCCTTGACATATTGACATTGGAGAGCATAGGTCAGATGCCTTTTAGCTTGCCTAGTGCACAAGGATGCAGAGCTGGGACGGAGAGCATTCTCAGAAAACATCTGGGGGATGAAATTATAGAACCGCTTTTCGATCTATATTCGAAGAATAAAAATATTGCTGCAGGAAGTGCTTCCCTTGTTCATGACGACAGCATGGCGGTTGGATTCTTTGTTCTTGTCAAGCGCAAATTGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_7

Protein Analysis

357

Amino Acids

38.93

Weight (kDa)

5.23

Isoelectric Point (pI)

46.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007511)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g16990
malus_domestica	MD06G1224000.v1.1 MD06G1224100.v1.1
prunus_persica	Prupe.5G229100_v2.0.a1 Prupe.8G068600_v2.0.a1
pyrus_communis	pycom14g19440
rosa_chinensis	RchiOBHm_Chr7g0178881 RchiOBHm_Chr7g0178891 RchiOBHm_Chr7g0178921
rosa_laevigata	RLG00000005395 RLG00000005396 RLG00000005397
rosa_roxburghii	Rroxscaffold_3G00274580
rosa_rugosa	Rorug06G0420500
rosa_samantha	Rh7AG019900 Rh7BG019400 Rh7BG019500 Rh7CG020000 Rh7CG020100 Rh7CG020300 Rh7CG020500 Rh7DG019900 Rh7DG020000 Rh7DG020300
rosa_wichuraiana	Rw7G001610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	505
Acc36I	ACCTGC	1 cut(s)	505
AccB1I	GGYRCC	1 cut(s)	831
AccI	GTMKAC	3 cut(s)	297, 713, 783
AccIII	TCCGGA	1 cut(s)	162
AciI	CCGC	3 cut(s)	68, 956, 1031
AcoI	YGGCCR	3 cut(s)	69, 149, 547
AcsI	RAATTY	4 cut(s)	11, 55, 679, 758
AcyI	GRCGYC	1 cut(s)	652
AfiI	CCNNNNNNNGG	2 cut(s)	23, 796
AgsI	TTSAA	6 cut(s)	134, 209, 293, 328, 701, 772
AhdI	GACNNNNNGTC	1 cut(s)	583
AjnI	CCWGG	3 cut(s)	549, 619, 646
AloI	GAACNNNNNNTCC	2 cut(s)	1029, 1061
AluBI	AGCT	6 cut(s)	45, 478, 563, 613, 879, 905
AluI	AGCT	6 cut(s)	45, 478, 563, 613, 879, 905
Alw21I	GWGCWC	1 cut(s)	892
Alw26I	GTCTC	1 cut(s)	150
Alw44I	GTGCAC	1 cut(s)	888
Ama87I	CYCGRG	2 cut(s)	351, 600
Aor13HI	TCCGGA	1 cut(s)	162
AoxI	GGCC	6 cut(s)	34, 69, 149, 414, 547, 625
ApaLI	GTGCAC	1 cut(s)	888
ApeKI	GCWGC	4 cut(s)	65, 77, 107, 992
ApoI	RAATTY	4 cut(s)	11, 55, 679, 758
Asp700I	GAANNNNTTC	2 cut(s)	12, 1003
AspLEI	GCGC	1 cut(s)	1059
AspS9I	GGNCC	2 cut(s)	35, 191
AsuC2I	CCSGG	1 cut(s)	384
AsuHPI	GGTGA	3 cut(s)	287, 486, 742
AsuII	TTCGAA	2 cut(s)	117, 974
AvaI	CYCGRG	2 cut(s)	351, 600
AvaII	GGWCC	1 cut(s)	191
AxyI	CCTNAGG	1 cut(s)	411
BaeGI	GKGCMC	2 cut(s)	814, 892
BalI	TGGCCA	1 cut(s)	549
BanI	GGYRCC	1 cut(s)	831
BanII	GRGCYC	1 cut(s)	389
BbsI	GAAGAC	1 cut(s)	406
Bbv12I	GWGCWC	1 cut(s)	892
BbvI	GCAGC	4 cut(s)	77, 89, 119, 979
BccI	CCATC	3 cut(s)	26, 77, 799
BceAI	ACGGC	1 cut(s)	215
BciT130I	CCWGG	3 cut(s)	551, 621, 648
BcnI	CCSGG	1 cut(s)	384
BcoDI	GTCTC	1 cut(s)	150
BfaI	CTAG	1 cut(s)	885
BfmI	CTRYAG	3 cut(s)	140, 372, 993
BfuAI	ACCTGC	1 cut(s)	505
BisI	GCNGC	5 cut(s)	66, 69, 78, 108, 993
BlsI	GCNGC	5 cut(s)	67, 70, 79, 109, 994
Bme1390I	CCNGG	4 cut(s)	384, 551, 621, 648
Bme18I	GGWCC	1 cut(s)	191
BmeRI	GACNNNNNGTC	1 cut(s)	583
BmeT110I	CYCGRG	2 cut(s)	351, 600
BmgT120I	GGNCC	2 cut(s)	35, 191
BmiI	GGNNCC	1 cut(s)	833
BmrFI	CCNGG	4 cut(s)	384, 551, 621, 648
BmrI	ACTGGG	1 cut(s)	837
BmsI	GCATC	3 cut(s)	217, 858, 887
BmuI	ACTGGG	1 cut(s)	837
BpiI	GAAGAC	1 cut(s)	406
BpmI	CTGGAG	1 cut(s)	642
Bpu14I	TTCGAA	2 cut(s)	117, 974
BpuMI	CCSGG	1 cut(s)	384
BsaAI	YACGTR	1 cut(s)	482
BsaHI	GRCGYC	1 cut(s)	652
BsaJI	CCNNGG	5 cut(s)	72, 394, 647, 658, 705
BsaWI	WCCGGW	1 cut(s)	162
Bsc4I	CCNNNNNNNGG	2 cut(s)	23, 796
Bse1I	ACTGG	3 cut(s)	265, 458, 832
Bse21I	CCTNAGG	1 cut(s)	411
Bse3DI	GCAATG	2 cut(s)	102, 535
BseAI	TCCGGA	1 cut(s)	162
BseBI	CCWGG	3 cut(s)	551, 621, 648
BseDI	CCNNGG	5 cut(s)	72, 394, 647, 658, 705
BseGI	GGATG	2 cut(s)	902, 946
BseLI	CCNNNNNNNGG	2 cut(s)	23, 796
BseMI	GCAATG	2 cut(s)	102, 535
BseMII	CTCAG	3 cut(s)	402, 578, 937
BseNI	ACTGG	3 cut(s)	265, 458, 832
BseRI	GAGGAG	1 cut(s)	815
BseSI	GKGCMC	2 cut(s)	814, 892
BseXI	GCAGC	4 cut(s)	77, 89, 119, 979
BseYI	CCCAGC	1 cut(s)	905
BsgI	GTGCAG	1 cut(s)	434
BshFI	GGCC	6 cut(s)	36, 71, 151, 416, 549, 627
BshNI	GGYRCC	1 cut(s)	831
BsiHKAI	GWGCWC	1 cut(s)	892
BsiHKCI	CYCGRG	2 cut(s)	351, 600
BsiSI	CCGG	2 cut(s)	163, 383
BslFI	GGGAC	2 cut(s)	639, 922
BslI	CCNNNNNNNGG	2 cut(s)	23, 796
BsmAI	GTCTC	1 cut(s)	150
BsmFI	GGGAC	2 cut(s)	639, 922
BsmI	GAATGC	1 cut(s)	918
BsnI	GGCC	6 cut(s)	36, 71, 151, 416, 549, 627
BsoBI	CYCGRG	2 cut(s)	351, 600
Bsp119I	TTCGAA	2 cut(s)	117, 974
Bsp1286I	GDGCHC	3 cut(s)	389, 814, 892
Bsp13I	TCCGGA	1 cut(s)	162
Bsp143I	GATC	2 cut(s)	307, 964
Bsp19I	CCATGG	2 cut(s)	394, 658
BspACI	CCGC	3 cut(s)	68, 956, 1031
BspANI	GGCC	6 cut(s)	36, 71, 151, 416, 549, 627
BspCNI	CTCAG	3 cut(s)	403, 577, 936
BspEI	TCCGGA	1 cut(s)	162
BspHI	TCATGA	1 cut(s)	1015
BspLI	GGNNCC	1 cut(s)	833
BspMAI	CTGCAG	3 cut(s)	144, 376, 997
BspMI	ACCTGC	1 cut(s)	505
BspQI	GCTCTTC	1 cut(s)	248
BspT104I	TTCGAA	2 cut(s)	117, 974
BspT107I	GGYRCC	1 cut(s)	831
BsrDI	GCAATG	2 cut(s)	102, 535
BsrI	ACTGG	3 cut(s)	265, 458, 832
BssECI	CCNNGG	5 cut(s)	72, 394, 647, 658, 705
BssMI	GATC	2 cut(s)	307, 964
BssNAI	GTATAC	1 cut(s)	298
BssNI	GRCGYC	1 cut(s)	652
BssT1I	CCWWGG	4 cut(s)	72, 394, 658, 705
Bst1107I	GTATAC	1 cut(s)	298
Bst2UI	CCWGG	3 cut(s)	551, 621, 648
Bst4CI	ACNGT	1 cut(s)	537
Bst6I	CTCTTC	2 cut(s)	248, 410
BstACI	GRCGYC	1 cut(s)	652
BstAPI	GCANNNNNTGC	2 cut(s)	86, 1001
BstBAI	YACGTR	1 cut(s)	482
BstBI	TTCGAA	2 cut(s)	117, 974
BstC8I	GCNNGC	3 cut(s)	615, 665, 881
BstDEI	CTNAG	5 cut(s)	411, 462, 564, 746, 923
BstDSI	CCRYGG	2 cut(s)	394, 658
BstF5I	GGATG	2 cut(s)	902, 946
BstHHI	GCGC	1 cut(s)	1059
BstKTI	GATC	2 cut(s)	310, 967
BstMAI	GTCTC	1 cut(s)	150
BstMBI	GATC	2 cut(s)	307, 964
BstNI	CCWGG	3 cut(s)	551, 621, 648
BstSCI	CCNGG	4 cut(s)	382, 549, 619, 646
BstSFI	CTRYAG	3 cut(s)	140, 372, 993
BstSLI	GKGCMC	2 cut(s)	814, 892
BstV1I	GCAGC	4 cut(s)	77, 89, 119, 979
BstV2I	GAAGAC	1 cut(s)	406
BstXI	CCANNNNNNTGG	1 cut(s)	272
BstZ17I	GTATAC	1 cut(s)	298
Bsu36I	CCTNAGG	1 cut(s)	411
BsuRI	GGCC	6 cut(s)	36, 71, 151, 416, 549, 627
BtgI	CCRYGG	2 cut(s)	394, 658
BtsCI	GGATG	2 cut(s)	902, 946
BtsI	GCAGTG	1 cut(s)	369
BtsIMutI	CAGTG	2 cut(s)	369, 451
BveI	ACCTGC	1 cut(s)	505
Cac8I	GCNNGC	3 cut(s)	615, 665, 881
CciI	TCATGA	1 cut(s)	1015
CfoI	GCGC	1 cut(s)	1059
Cfr13I	GGNCC	2 cut(s)	35, 191
CseI	GACGC	1 cut(s)	641
CviAII	CATG	6 cut(s)	395, 596, 631, 659, 1016, 1027
DdeI	CTNAG	5 cut(s)	411, 462, 564, 746, 923
DpnI	GATC	2 cut(s)	309, 966
DpnII	GATC	2 cut(s)	307, 964
DriI	GACNNNNNGTC	1 cut(s)	583
EaeI	YGGCCR	3 cut(s)	69, 149, 547
Eam1104I	CTCTTC	2 cut(s)	248, 410
Eam1105I	GACNNNNNGTC	1 cut(s)	583
EarI	CTCTTC	2 cut(s)	248, 410
Eco130I	CCWWGG	4 cut(s)	72, 394, 658, 705
Eco147I	AGGCCT	2 cut(s)	416, 627
Eco24I	GRGCYC	1 cut(s)	389
Eco47I	GGWCC	1 cut(s)	191
Eco81I	CCTNAGG	1 cut(s)	411
Eco88I	CYCGRG	2 cut(s)	351, 600
EcoRI	GAATTC	1 cut(s)	679
EcoRII	CCWGG	3 cut(s)	549, 619, 646
EcoT14I	CCWWGG	4 cut(s)	72, 394, 658, 705
EcoT38I	GRGCYC	1 cut(s)	389
ErhI	CCWWGG	4 cut(s)	72, 394, 658, 705
FaeI	CATG	6 cut(s)	398, 599, 634, 662, 1019, 1030
FaqI	GGGAC	2 cut(s)	639, 922
FatI	CATG	6 cut(s)	394, 595, 630, 658, 1015, 1026
FauNDI	CATATG	1 cut(s)	442
FblI	GTMKAC	3 cut(s)	297, 713, 783
Fnu4HI	GCNGC	5 cut(s)	66, 69, 78, 108, 993
FokI	GGATG	2 cut(s)	909, 953
FriOI	GRGCYC	1 cut(s)	389
Fsp4HI	GCNGC	5 cut(s)	66, 69, 78, 108, 993
FspBI	CTAG	1 cut(s)	885
GlaI	GCGC	1 cut(s)	1058
GluI	GCNGC	5 cut(s)	66, 69, 78, 108, 993
GsaI	CCCAGC	1 cut(s)	909
GsuI	CTGGAG	1 cut(s)	642
HaeIII	GGCC	6 cut(s)	36, 71, 151, 416, 549, 627
HapII	CCGG	2 cut(s)	163, 383
HgaI	GACGC	1 cut(s)	641
HhaI	GCGC	1 cut(s)	1059
Hin1I	GRCGYC	1 cut(s)	652
Hin1II	CATG	6 cut(s)	398, 599, 634, 662, 1019, 1030
Hin6I	GCGC	1 cut(s)	1057
HinP1I	GCGC	1 cut(s)	1057
HinfI	GANTC	5 cut(s)	402, 643, 710, 764, 1038
HpaII	CCGG	2 cut(s)	163, 383
HphI	GGTGA	3 cut(s)	287, 486, 742
Hpy166II	GTNNAC	8 cut(s)	214, 278, 298, 433, 714, 733, 784, 890
Hpy188I	TCNGA	3 cut(s)	867, 926, 1070
Hpy188III	TCNNGA	3 cut(s)	163, 353, 1016
Hpy8I	GTNNAC	8 cut(s)	214, 278, 298, 433, 714, 733, 784, 890
HpyCH4III	ACNGT	1 cut(s)	537
HpyCH4IV	ACGT	1 cut(s)	481
HpyF3I	CTNAG	5 cut(s)	411, 462, 564, 746, 923
HpySE526I	ACGT	1 cut(s)	481
Hsp92I	GRCGYC	1 cut(s)	652
Hsp92II	CATG	6 cut(s)	398, 599, 634, 662, 1019, 1030
HspAI	GCGC	1 cut(s)	1057
Kpn2I	TCCGGA	1 cut(s)	162
Kzo9I	GATC	2 cut(s)	307, 964
LguI	GCTCTTC	1 cut(s)	248
LmnI	GCTCC	2 cut(s)	622, 694
Lsp1109I	GCAGC	4 cut(s)	77, 89, 119, 979
LweI	GCATC	3 cut(s)	217, 858, 887
MaeI	CTAG	1 cut(s)	885
MaeII	ACGT	1 cut(s)	481
MaeIII	GTNAC	1 cut(s)	482
MalI	GATC	2 cut(s)	309, 966
MboI	GATC	2 cut(s)	307, 964
MboII	GAAGA	7 cut(s)	20, 265, 397, 411, 764, 833, 988
MhlI	GDGCHC	3 cut(s)	389, 814, 892
MlsI	TGGCCA	1 cut(s)	549
MluCI	AATT	8 cut(s)	11, 55, 222, 424, 679, 758, 945, 1061
MluNI	TGGCCA	1 cut(s)	549
MlyI	GAGTC	3 cut(s)	396, 719, 758
MmeI	TCCRAC	2 cut(s)	169, 1015
MnlI	CCTC	7 cut(s)	360, 406, 427, 596, 617, 638, 793
Mox20I	TGGCCA	1 cut(s)	549
MroI	TCCGGA	1 cut(s)	162
MroXI	GAANNNNTTC	2 cut(s)	12, 1003
MscI	TGGCCA	1 cut(s)	549
MseI	TTAA	3 cut(s)	423, 504, 582
MslI	CAYNNNNRTG	2 cut(s)	209, 895
Msp20I	TGGCCA	1 cut(s)	549
MspA1I	CMGCKG	1 cut(s)	68
MspI	CCGG	2 cut(s)	163, 383
MspR9I	CCNGG	4 cut(s)	384, 551, 621, 648
Mva1269I	GAATGC	1 cut(s)	918
MvaI	CCWGG	3 cut(s)	551, 621, 648
NciI	CCSGG	1 cut(s)	384
NcoI	CCATGG	2 cut(s)	394, 658
NdeI	CATATG	1 cut(s)	442
NdeII	GATC	2 cut(s)	307, 964
NlaIII	CATG	6 cut(s)	398, 599, 634, 662, 1019, 1030
NlaIV	GGNNCC	1 cut(s)	833
NmeAIII	GCCGAG	2 cut(s)	127, 416
NmuCI	GTSAC	1 cut(s)	482
NspV	TTCGAA	2 cut(s)	117, 974
PaeR7I	CTCGAG	2 cut(s)	351, 600
PagI	TCATGA	1 cut(s)	1015
PaqCI	CACCTGC	1 cut(s)	505
PceI	AGGCCT	2 cut(s)	416, 627
PciSI	GCTCTTC	1 cut(s)	248
PctI	GAATGC	1 cut(s)	918
PdmI	GAANNNNTTC	2 cut(s)	12, 1003
PfeI	GAWTC	2 cut(s)	643, 1038
PfoI	TCCNGGA	1 cut(s)	619
PkrI	GCNGC	5 cut(s)	67, 70, 79, 109, 994
PleI	GAGTC	3 cut(s)	396, 718, 758
PpsI	GAGTC	3 cut(s)	396, 718, 758
Ppu21I	YACGTR	1 cut(s)	482
Psp6I	CCWGG	3 cut(s)	549, 619, 646
PspFI	CCCAGC	1 cut(s)	905
PspGI	CCWGG	3 cut(s)	549, 619, 646
PspN4I	GGNNCC	1 cut(s)	833
PspPI	GGNCC	2 cut(s)	35, 191
PspXI	VCTCGAGB	1 cut(s)	600
PstI	CTGCAG	3 cut(s)	144, 376, 997
RseI	CAYNNNNRTG	2 cut(s)	209, 895
SapI	GCTCTTC	1 cut(s)	248
SaqAI	TTAA	3 cut(s)	423, 504, 582
SatI	GCNGC	5 cut(s)	66, 69, 78, 108, 993
Sau3AI	GATC	2 cut(s)	307, 964
Sau96I	GGNCC	2 cut(s)	35, 191
SchI	GAGTC	3 cut(s)	396, 719, 758
ScrFI	CCNGG	4 cut(s)	384, 551, 621, 648
SduI	GDGCHC	3 cut(s)	389, 814, 892
SfaNI	GCATC	3 cut(s)	217, 858, 887
SfcI	CTRYAG	3 cut(s)	140, 372, 993
Sfr274I	CTCGAG	2 cut(s)	351, 600
SfuI	TTCGAA	2 cut(s)	117, 974
SinI	GGWCC	1 cut(s)	191
SlaI	CTCGAG	2 cut(s)	351, 600
SmiMI	CAYNNNNRTG	2 cut(s)	209, 895
SmlI	CTYRAG	2 cut(s)	351, 600
SmoI	CTYRAG	2 cut(s)	351, 600
Sse9I	AATT	8 cut(s)	11, 55, 222, 424, 679, 758, 945, 1061
SseBI	AGGCCT	2 cut(s)	416, 627
SsiI	CCGC	3 cut(s)	68, 956, 1031
SspI	AATATT	3 cut(s)	114, 365, 988
SspMI	CTAG	1 cut(s)	885
StuI	AGGCCT	2 cut(s)	416, 627
StyD4I	CCNGG	4 cut(s)	382, 549, 619, 646
StyI	CCWWGG	4 cut(s)	72, 394, 658, 705
TaaI	ACNGT	1 cut(s)	537
TaiI	ACGT	1 cut(s)	484
TaqI	TCGA	5 cut(s)	117, 352, 601, 963, 974
TasI	AATT	8 cut(s)	11, 55, 222, 424, 679, 758, 945, 1061
TauI	GCSGC	1 cut(s)	71
TfiI	GAWTC	2 cut(s)	643, 1038
Tru1I	TTAA	3 cut(s)	423, 504, 582
Tru9I	TTAA	3 cut(s)	423, 504, 582
TscAI	CASTG	2 cut(s)	376, 458
TseFI	GTSAC	1 cut(s)	482
TseI	GCWGC	4 cut(s)	65, 77, 107, 992
Tsp45I	GTSAC	1 cut(s)	482
TspDTI	ATGAA	5 cut(s)	193, 555, 584, 957, 1004
TspGWI	ACGGA	1 cut(s)	926
TspRI	CASTG	2 cut(s)	376, 458
VneI	GTGCAC	1 cut(s)	888
VpaK11BI	GGWCC	1 cut(s)	191
XapI	RAATTY	4 cut(s)	11, 55, 679, 758
XhoI	CTCGAG	2 cut(s)	351, 600
XmiI	GTMKAC	3 cut(s)	297, 713, 783
XmnI	GAANNNNTTC	2 cut(s)	12, 1003
XspI	CTAG	1 cut(s)	885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.