Rh7CG020300

S-adenosylmethionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007511
Physical Location & Seq
Forward (+)
1512444 .. 1512814
371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG020300.1

Sequence Viewer

Length: 186 bp
ATGGTGCTTCTCATATCTGGCCGGCCAGATGGGACACTTCCTCAACAATATTCCCTTGGTCCCCTTTACGACCCTGTCGAATCTTGCCTTCTTGATATGGTTGATGAGGGCTTATTAAGCGTAGATAAGATCGACTCTTTCAACATGCTAACTTATAGTCCCTTTGAATACAACGCAAGAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

61

Amino Acids

6.8

Weight (kDa)

4.05

Isoelectric Point (pI)

43.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 1 - 55 5.3e-08 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 2 cut(s) 19, 23
AgsI TTSAA 2 cut(s) 142, 167
AluBI AGCT 1 cut(s) 182
AluI AGCT 1 cut(s) 182
AoxI GGCC 2 cut(s) 19, 23
AspS9I GGNCC 1 cut(s) 59
AvaII GGWCC 1 cut(s) 59
BccI CCATC 1 cut(s) 23
Bme18I GGWCC 1 cut(s) 59
BmgT120I GGNCC 1 cut(s) 59
BmiI GGNNCC 1 cut(s) 61
BsaJI CCNNGG 1 cut(s) 55
Bse118I RCCGGY 1 cut(s) 21
BseDI CCNNGG 1 cut(s) 55
BshFI GGCC 2 cut(s) 21, 25
BsiSI CCGG 1 cut(s) 22
BslFI GGGAC 3 cut(s) 45, 46, 144
BsmFI GGGAC 3 cut(s) 45, 46, 144
BsnI GGCC 2 cut(s) 21, 25
Bsp143I GATC 1 cut(s) 129
BspANI GGCC 2 cut(s) 21, 25
BspLI GGNNCC 1 cut(s) 61
BsrFI RCCGGY 1 cut(s) 21
BssAI RCCGGY 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 55
BssMI GATC 1 cut(s) 129
BssT1I CCWWGG 1 cut(s) 55
BstC8I GCNNGC 1 cut(s) 23
BstDEI CTNAG 1 cut(s) 183
BstKTI GATC 1 cut(s) 132
BstMBI GATC 1 cut(s) 129
BstMWI GCNNNNNNNGC 1 cut(s) 117
BstNSI RCATGY 1 cut(s) 148
BsuRI GGCC 2 cut(s) 21, 25
Cac8I GCNNGC 1 cut(s) 23
Cfr10I RCCGGY 1 cut(s) 21
Cfr13I GGNCC 1 cut(s) 59
CviAII CATG 1 cut(s) 145
CviJI RGCY 4 cut(s) 21, 25, 111, 182
CviKI_1 RGCY 4 cut(s) 21, 25, 111, 182
DdeI CTNAG 1 cut(s) 183
DpnI GATC 1 cut(s) 131
DpnII GATC 1 cut(s) 129
EaeI YGGCCR 2 cut(s) 19, 23
Eco130I CCWWGG 1 cut(s) 55
Eco47I GGWCC 1 cut(s) 59
EcoT14I CCWWGG 1 cut(s) 55
ErhI CCWWGG 1 cut(s) 55
FaeI CATG 1 cut(s) 148
FaiI YATR 4 cut(s) 14, 98, 146, 156
FaqI GGGAC 3 cut(s) 45, 46, 144
FatI CATG 1 cut(s) 144
FseI GGCCGGCC 1 cut(s) 25
HaeIII GGCC 2 cut(s) 21, 25
HapII CCGG 1 cut(s) 22
Hin1II CATG 1 cut(s) 148
HinfI GANTC 2 cut(s) 80, 134
HpaII CCGG 1 cut(s) 22
Hpy188III TCNNGA 1 cut(s) 92
HpyAV CCTTC 1 cut(s) 98
HpyF10VI GCNNNNNNNGC 1 cut(s) 117
HpyF3I CTNAG 1 cut(s) 183
Hsp92II CATG 1 cut(s) 148
KroI GCCGGC 1 cut(s) 21
KroNI GCCGGC 1 cut(s) 23
Kzo9I GATC 1 cut(s) 129
LpnPI CCDG 4 cut(s) 3, 35, 39, 87
MalI GATC 1 cut(s) 131
MboI GATC 1 cut(s) 129
MlyI GAGTC 1 cut(s) 128
MnlI CCTC 2 cut(s) 51, 100
MroNI GCCGGC 1 cut(s) 21
MseI TTAA 1 cut(s) 116
MspI CCGG 1 cut(s) 22
MwoI GCNNNNNNNGC 1 cut(s) 117
NaeI GCCGGC 1 cut(s) 23
NdeII GATC 1 cut(s) 129
NgoMIV GCCGGC 1 cut(s) 21
NlaIII CATG 1 cut(s) 148
NlaIV GGNNCC 1 cut(s) 61
NspI RCATGY 1 cut(s) 148
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PdiI GCCGGC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 80
PflFI GACNNNGTC 1 cut(s) 74
PleI GAGTC 1 cut(s) 128
PpsI GAGTC 1 cut(s) 128
PspN4I GGNNCC 1 cut(s) 61
PspPI GGNCC 1 cut(s) 59
PsyI GACNNNGTC 1 cut(s) 74
RigI GGCCGGCC 1 cut(s) 25
SaqAI TTAA 1 cut(s) 116
Sau3AI GATC 1 cut(s) 129
Sau96I GGNCC 1 cut(s) 59
SchI GAGTC 1 cut(s) 128
SetI ASST 1 cut(s) 184
SgeI CNNG 8 cut(s) 30, 34, 38, 68, 86, 96, 104, 157
SinI GGWCC 1 cut(s) 59
SspI AATATT 1 cut(s) 50
StyI CCWWGG 1 cut(s) 55
TaqI TCGA 2 cut(s) 78, 132
TfiI GAWTC 1 cut(s) 80
Tru1I TTAA 1 cut(s) 116
Tru9I TTAA 1 cut(s) 116
Tth111I GACNNNGTC 1 cut(s) 74
VpaK11BI GGWCC 1 cut(s) 59
XceI RCATGY 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.