Rh7CG020100

S-adenosylmethionine-dependent methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0007511
Physical Location & Seq
Forward (+)
1506373 .. 1506660
288 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG020100.1

Sequence Viewer

Length: 288 bp
ATGATGATGCTAAAGAACAATTATTTACTGCTCTTCAAGGCAATGCTGGTTGAGGCCATTCTTGAAAACCTTCAGATTGGTAATCTCTGTAGTACTACTAATTCAAACTCATTCTGTATTGCTGATTTTGGTTGTTCCGCTGGTCCAAACACATTCATTGCAGTCAATAATATCATAGAAACCGTAACACAAAAATTCGAGATCGAAGGCCAATCTTCACTTCTCCCAGAATTCCATGTATACTTCAATGTGTTGAAAATTCTGATCATGGTGAAAATTAAGCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_7

Protein Analysis

95

Amino Acids

10.65

Weight (kDa)

5.67

Isoelectric Point (pI)

29.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_7 PF03492 28 - 83 5.1e-16 SAM dependent carboxyl methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 240
AciI CCGC 1 cut(s) 138
AcsI RAATTY 3 cut(s) 194, 230, 258
AcuI CTGAAG 1 cut(s) 56
AfaI GTAC 1 cut(s) 94
AgsI TTSAA 5 cut(s) 37, 65, 105, 247, 256
AjuI GAANNNNNNNTTGG 2 cut(s) 204, 236
AoxI GGCC 2 cut(s) 54, 208
ApoI RAATTY 3 cut(s) 194, 230, 258
Asp700I GAANNNNTTC 1 cut(s) 69
AspS9I GGNCC 1 cut(s) 143
AsuHPI GGTGA 1 cut(s) 283
AvaII GGWCC 1 cut(s) 143
BclI TGATCA 1 cut(s) 264
BfmI CTRYAG 1 cut(s) 88
BmcAI AGTACT 1 cut(s) 94
Bme18I GGWCC 1 cut(s) 143
BmgT120I GGNCC 1 cut(s) 143
Bse3DI GCAATG 2 cut(s) 48, 156
BseMI GCAATG 2 cut(s) 48, 156
BshFI GGCC 2 cut(s) 56, 210
BsnI GGCC 2 cut(s) 56, 210
Bsp143I GATC 2 cut(s) 201, 264
BspACI CCGC 1 cut(s) 138
BspANI GGCC 2 cut(s) 56, 210
BspQI GCTCTTC 1 cut(s) 38
BsrDI GCAATG 2 cut(s) 48, 156
BssMI GATC 2 cut(s) 201, 264
BssNAI GTATAC 1 cut(s) 241
Bst1107I GTATAC 1 cut(s) 241
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 1 cut(s) 38
BstKTI GATC 2 cut(s) 204, 267
BstMBI GATC 2 cut(s) 201, 264
BstSFI CTRYAG 1 cut(s) 88
BstZ17I GTATAC 1 cut(s) 241
BsuRI GGCC 2 cut(s) 56, 210
Cfr13I GGNCC 1 cut(s) 143
Csp6I GTAC 1 cut(s) 93
CviAII CATG 2 cut(s) 236, 268
CviJI RGCY 3 cut(s) 56, 210, 283
CviKI_1 RGCY 3 cut(s) 56, 210, 283
CviQI GTAC 1 cut(s) 93
DpnI GATC 2 cut(s) 203, 266
DpnII GATC 2 cut(s) 201, 264
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
Eco47I GGWCC 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 56
EcoRI GAATTC 1 cut(s) 230
FaeI CATG 2 cut(s) 239, 271
FaiI YATR 4 cut(s) 176, 237, 241, 269
FatI CATG 2 cut(s) 235, 267
FbaI TGATCA 1 cut(s) 264
FblI GTMKAC 1 cut(s) 240
HaeIII GGCC 2 cut(s) 56, 210
Hin1II CATG 2 cut(s) 239, 271
HphI GGTGA 1 cut(s) 283
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 2 cut(s) 75, 264
Hpy188III TCNNGA 2 cut(s) 62, 199
Hpy8I GTNNAC 1 cut(s) 241
HpyAV CCTTC 2 cut(s) 80, 200
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4V TGCA 1 cut(s) 161
Hsp92II CATG 2 cut(s) 239, 271
Ksp22I TGATCA 1 cut(s) 264
Kzo9I GATC 2 cut(s) 201, 264
LguI GCTCTTC 1 cut(s) 38
LpnPI CCDG 3 cut(s) 32, 126, 240
MaeIII GTNAC 1 cut(s) 184
MalI GATC 2 cut(s) 203, 266
MboI GATC 2 cut(s) 201, 264
MboII GAAGA 2 cut(s) 25, 207
MluCI AATT 6 cut(s) 19, 100, 194, 230, 258, 276
MnlI CCTC 1 cut(s) 46
MroXI GAANNNNTTC 1 cut(s) 69
MseI TTAA 1 cut(s) 279
MspA1I CMGCKG 1 cut(s) 140
NdeII GATC 2 cut(s) 201, 264
NlaIII CATG 2 cut(s) 239, 271
PciSI GCTCTTC 1 cut(s) 38
PdmI GAANNNNTTC 1 cut(s) 69
PspPI GGNCC 1 cut(s) 143
RsaI GTAC 1 cut(s) 94
RsaNI GTAC 1 cut(s) 93
SapI GCTCTTC 1 cut(s) 38
SaqAI TTAA 1 cut(s) 279
Sau3AI GATC 2 cut(s) 201, 264
Sau96I GGNCC 1 cut(s) 143
ScaI AGTACT 1 cut(s) 94
SetI ASST 1 cut(s) 72
SfcI CTRYAG 1 cut(s) 88
SgeI CNNG 8 cut(s) 49, 59, 74, 153, 211, 239, 248, 280
SinI GGWCC 1 cut(s) 143
Sse9I AATT 6 cut(s) 19, 100, 194, 230, 258, 276
SsiI CCGC 1 cut(s) 138
TaaI ACNGT 1 cut(s) 184
TaqI TCGA 2 cut(s) 198, 204
TasI AATT 6 cut(s) 19, 100, 194, 230, 258, 276
TatI WGTACW 1 cut(s) 92
Tru1I TTAA 1 cut(s) 279
Tru9I TTAA 1 cut(s) 279
TspDTI ATGAA 1 cut(s) 145
VpaK11BI GGWCC 1 cut(s) 143
XapI RAATTY 3 cut(s) 194, 230, 258
XmiI GTMKAC 1 cut(s) 240
XmnI GAANNNNTTC 1 cut(s) 69
ZrmI AGTACT 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.