mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01435 AT3G01435 AT3G01435 AT3G01435 |
| fragaria_vesca | FvH4_2g07050 FvH4_2g07070 |
| malus_domestica | MD10G1088300.v1.1 |
| prunus_persica | Prupe.8G114900_v2.0.a1 Prupe.8G114900_v2.0.a1 Prupe.8G114900_v2.0.a1 Prupe.8G115200_v2.0.a1 |
| pyrus_communis | pycom10g07060 |
| rosa_chinensis | RchiOBHm_Chr6g0259451 RchiOBHm_Chr6g0259461 RchiOBHm_Chr7g0240711 |
| rosa_laevigata | RLG00000000624 RLG00000014531 RLG00000014532 RLG00000014533 |
| rosa_multiflora | Rmu_sc0006836.1_g000001 Rmu_sc0006836.1_g000005 Rmu_ssc0000050.1_g000040 |
| rosa_roxburghii | Rroxscaffold_3G00219640 Rroxscaffold_7G00206730 Rroxscaffold_7G00206740 |
| rosa_rugosa | Rorug05G0588800 Rorug05G0588900 Rorug07G0338400 |
| rosa_samantha | Rh6AG104700 Rh6BG097800 Rh6CG093800 Rh6DG087700 Rh7AG493100 Rh7BG465100 |
| rosa_wichuraiana | Rw6G009040 Rw6G009060 Rw6G009070 Rw7G041710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 199 |
| AgsI | TTSAA | 3 cut(s) | 50, 188, 258 |
| AluBI | AGCT | 4 cut(s) | 85, 89, 109, 266 |
| AluI | AGCT | 4 cut(s) | 85, 89, 109, 266 |
| AspS9I | GGNCC | 1 cut(s) | 125 |
| AsuNHI | GCTAGC | 1 cut(s) | 85 |
| AvaII | GGWCC | 1 cut(s) | 125 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 233, 265 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BclI | TGATCA | 1 cut(s) | 174 |
| BfaI | CTAG | 2 cut(s) | 86, 120 |
| Bme18I | GGWCC | 1 cut(s) | 125 |
| BmgT120I | GGNCC | 1 cut(s) | 125 |
| BmiI | GGNNCC | 1 cut(s) | 127 |
| BmsI | GCATC | 1 cut(s) | 304 |
| BmtI | GCTAGC | 1 cut(s) | 89 |
| BpmI | CTGGAG | 1 cut(s) | 111 |
| BsaJI | CCNNGG | 1 cut(s) | 9 |
| Bse1I | ACTGG | 1 cut(s) | 294 |
| Bse3DI | GCAATG | 2 cut(s) | 151, 324 |
| BseDI | CCNNGG | 1 cut(s) | 9 |
| BseGI | GGATG | 2 cut(s) | 208, 319 |
| BseMI | GCAATG | 2 cut(s) | 151, 324 |
| BseNI | ACTGG | 1 cut(s) | 294 |
| BslFI | GGGAC | 1 cut(s) | 111 |
| BsmFI | GGGAC | 1 cut(s) | 111 |
| Bsp143I | GATC | 1 cut(s) | 174 |
| Bsp19I | CCATGG | 1 cut(s) | 9 |
| BspACI | CCGC | 1 cut(s) | 199 |
| BspLI | GGNNCC | 1 cut(s) | 127 |
| BspOI | GCTAGC | 1 cut(s) | 89 |
| BsrDI | GCAATG | 2 cut(s) | 151, 324 |
| BsrI | ACTGG | 1 cut(s) | 294 |
| BssECI | CCNNGG | 1 cut(s) | 9 |
| BssMI | GATC | 1 cut(s) | 174 |
| BssT1I | CCWWGG | 1 cut(s) | 9 |
| Bst4CI | ACNGT | 3 cut(s) | 230, 254, 309 |
| BstC8I | GCNNGC | 2 cut(s) | 87, 111 |
| BstDSI | CCRYGG | 1 cut(s) | 9 |
| BstF5I | GGATG | 2 cut(s) | 208, 319 |
| BstKTI | GATC | 1 cut(s) | 177 |
| BstMBI | GATC | 1 cut(s) | 174 |
| BstNSI | RCATGY | 1 cut(s) | 222 |
| BtgI | CCRYGG | 1 cut(s) | 9 |
| BtsCI | GGATG | 2 cut(s) | 208, 319 |
| BtsI | GCAGTG | 1 cut(s) | 194 |
| BtsIMutI | CAGTG | 1 cut(s) | 194 |
| Cac8I | GCNNGC | 2 cut(s) | 87, 111 |
| Cfr13I | GGNCC | 1 cut(s) | 125 |
| CviAII | CATG | 5 cut(s) | 10, 100, 166, 219, 301 |
| CviJI | RGCY | 5 cut(s) | 46, 85, 89, 109, 266 |
| CviKI_1 | RGCY | 5 cut(s) | 46, 85, 89, 109, 266 |
| DpnI | GATC | 1 cut(s) | 176 |
| DpnII | GATC | 1 cut(s) | 174 |
| Eco130I | CCWWGG | 1 cut(s) | 9 |
| Eco47I | GGWCC | 1 cut(s) | 125 |
| EcoT14I | CCWWGG | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 9 |
| FaeI | CATG | 5 cut(s) | 13, 103, 169, 222, 304 |
| FaiI | YATR | 6 cut(s) | 11, 101, 167, 220, 297, 302 |
| FaqI | GGGAC | 1 cut(s) | 111 |
| FatI | CATG | 5 cut(s) | 9, 99, 165, 218, 300 |
| FauI | CCCGC | 1 cut(s) | 192 |
| FbaI | TGATCA | 1 cut(s) | 174 |
| FokI | GGATG | 2 cut(s) | 215, 326 |
| FspBI | CTAG | 2 cut(s) | 86, 120 |
| GsuI | CTGGAG | 1 cut(s) | 111 |
| Hin1II | CATG | 5 cut(s) | 13, 103, 169, 222, 304 |
| HinfI | GANTC | 2 cut(s) | 14, 66 |
| Hpy188III | TCNNGA | 1 cut(s) | 258 |
| HpyCH4III | ACNGT | 3 cut(s) | 230, 254, 309 |
| HpyCH4V | TGCA | 7 cut(s) | 40, 113, 169, 218, 282, 317, 350 |
| Hsp92II | CATG | 5 cut(s) | 13, 103, 169, 222, 304 |
| Ksp22I | TGATCA | 1 cut(s) | 174 |
| Kzo9I | GATC | 1 cut(s) | 174 |
| LmnI | GCTCC | 1 cut(s) | 82 |
| LpnPI | CCDG | 4 cut(s) | 38, 75, 142, 275 |
| LweI | GCATC | 1 cut(s) | 304 |
| MaeI | CTAG | 2 cut(s) | 86, 120 |
| MaeIII | GTNAC | 1 cut(s) | 303 |
| MalI | GATC | 1 cut(s) | 176 |
| MboI | GATC | 1 cut(s) | 174 |
| MfeI | CAATTG | 1 cut(s) | 170 |
| MluCI | AATT | 2 cut(s) | 170, 207 |
| MmeI | TCCRAC | 1 cut(s) | 291 |
| MnlI | CCTC | 3 cut(s) | 36, 43, 86 |
| MseI | TTAA | 2 cut(s) | 72, 210 |
| MslI | CAYNNNNRTG | 1 cut(s) | 156 |
| MunI | CAATTG | 1 cut(s) | 170 |
| NcoI | CCATGG | 1 cut(s) | 9 |
| NdeII | GATC | 1 cut(s) | 174 |
| NheI | GCTAGC | 1 cut(s) | 85 |
| NlaIII | CATG | 5 cut(s) | 13, 103, 169, 222, 304 |
| NlaIV | GGNNCC | 1 cut(s) | 127 |
| NmuCI | GTSAC | 1 cut(s) | 303 |
| NspI | RCATGY | 1 cut(s) | 222 |
| PfeI | GAWTC | 2 cut(s) | 14, 66 |
| PspN4I | GGNNCC | 1 cut(s) | 127 |
| PspPI | GGNCC | 1 cut(s) | 125 |
| RseI | CAYNNNNRTG | 1 cut(s) | 156 |
| SaqAI | TTAA | 2 cut(s) | 72, 210 |
| Sau3AI | GATC | 1 cut(s) | 174 |
| Sau96I | GGNCC | 1 cut(s) | 125 |
| SetI | ASST | 7 cut(s) | 35, 78, 87, 91, 97, 111, 268 |
| SfaNI | GCATC | 1 cut(s) | 304 |
| SinI | GGWCC | 1 cut(s) | 125 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 156 |
| Sse9I | AATT | 2 cut(s) | 170, 207 |
| SsiI | CCGC | 1 cut(s) | 199 |
| SspMI | CTAG | 2 cut(s) | 86, 120 |
| StyI | CCWWGG | 1 cut(s) | 9 |
| TaaI | ACNGT | 3 cut(s) | 230, 254, 309 |
| TasI | AATT | 2 cut(s) | 170, 207 |
| TfiI | GAWTC | 2 cut(s) | 14, 66 |
| Tru1I | TTAA | 2 cut(s) | 72, 210 |
| Tru9I | TTAA | 2 cut(s) | 72, 210 |
| TscAI | CASTG | 1 cut(s) | 201 |
| TseFI | GTSAC | 1 cut(s) | 303 |
| Tsp45I | GTSAC | 1 cut(s) | 303 |
| TspDTI | ATGAA | 5 cut(s) | 17, 154, 219, 285, 335 |
| TspGWI | ACGGA | 1 cut(s) | 222 |
| TspRI | CASTG | 1 cut(s) | 201 |
| VpaK11BI | GGWCC | 1 cut(s) | 125 |
| XceI | RCATGY | 1 cut(s) | 222 |
| XspI | CTAG | 2 cut(s) | 86, 120 |