mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01435 AT3G01435 AT3G01435 AT3G01435 |
| fragaria_vesca | FvH4_2g07050 FvH4_2g07070 |
| malus_domestica | MD10G1088300.v1.1 |
| prunus_persica | Prupe.8G114900_v2.0.a1 Prupe.8G114900_v2.0.a1 Prupe.8G114900_v2.0.a1 Prupe.8G115200_v2.0.a1 |
| pyrus_communis | pycom10g07060 |
| rosa_chinensis | RchiOBHm_Chr6g0259451 RchiOBHm_Chr6g0259461 RchiOBHm_Chr7g0240711 |
| rosa_laevigata | RLG00000000624 RLG00000014531 RLG00000014532 RLG00000014533 |
| rosa_multiflora | Rmu_sc0006836.1_g000001 Rmu_sc0006836.1_g000005 Rmu_ssc0000050.1_g000040 |
| rosa_roxburghii | Rroxscaffold_3G00219640 Rroxscaffold_7G00206730 Rroxscaffold_7G00206740 |
| rosa_rugosa | Rorug05G0588800 Rorug05G0588900 Rorug07G0338400 |
| rosa_samantha | Rh6AG104700 Rh6BG097800 Rh6CG093800 Rh6DG087700 Rh7AG493100 Rh7BG465100 |
| rosa_wichuraiana | Rw6G009040 Rw6G009060 Rw6G009070 Rw7G041710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 10 |
| AclWI | GGATC | 1 cut(s) | 331 |
| AcuI | CTGAAG | 1 cut(s) | 161 |
| AfaI | GTAC | 2 cut(s) | 201, 284 |
| AgsI | TTSAA | 2 cut(s) | 69, 308 |
| AluBI | AGCT | 1 cut(s) | 77 |
| AluI | AGCT | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 331 |
| AoxI | GGCC | 1 cut(s) | 222 |
| AspS9I | GGNCC | 1 cut(s) | 222 |
| AsuHPI | GGTGA | 2 cut(s) | 269, 311 |
| BanII | GRGCYC | 1 cut(s) | 409 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 44, 76 |
| BccI | CCATC | 1 cut(s) | 324 |
| BfaI | CTAG | 1 cut(s) | 273 |
| BglII | AGATCT | 1 cut(s) | 84 |
| BmgT120I | GGNCC | 1 cut(s) | 222 |
| BmiI | GGNNCC | 1 cut(s) | 406 |
| BmsI | GCATC | 2 cut(s) | 117, 321 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 396 |
| BsaJI | CCNNGG | 1 cut(s) | 352 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 332, 362 |
| Bse1I | ACTGG | 1 cut(s) | 105 |
| Bse3DI | GCAATG | 2 cut(s) | 5, 164 |
| BseDI | CCNNGG | 1 cut(s) | 352 |
| BseGI | GGATG | 2 cut(s) | 19, 312 |
| BseMI | GCAATG | 2 cut(s) | 5, 164 |
| BseNI | ACTGG | 1 cut(s) | 105 |
| BshFI | GGCC | 1 cut(s) | 224 |
| BsmI | GAATGC | 1 cut(s) | 314 |
| BsnI | GGCC | 1 cut(s) | 224 |
| Bsp1286I | GDGCHC | 1 cut(s) | 409 |
| Bsp143I | GATC | 2 cut(s) | 84, 323 |
| BspACI | CCGC | 1 cut(s) | 10 |
| BspANI | GGCC | 1 cut(s) | 224 |
| BspLI | GGNNCC | 1 cut(s) | 406 |
| BspPI | GGATC | 1 cut(s) | 331 |
| BsrDI | GCAATG | 2 cut(s) | 5, 164 |
| BsrI | ACTGG | 1 cut(s) | 105 |
| BssECI | CCNNGG | 1 cut(s) | 352 |
| BssMI | GATC | 2 cut(s) | 84, 323 |
| BssT1I | CCWWGG | 1 cut(s) | 352 |
| Bst4CI | ACNGT | 3 cut(s) | 41, 65, 151 |
| BstF5I | GGATG | 2 cut(s) | 19, 312 |
| BstKTI | GATC | 2 cut(s) | 87, 326 |
| BstMBI | GATC | 2 cut(s) | 84, 323 |
| BstX2I | RGATCY | 1 cut(s) | 84 |
| BstYI | RGATCY | 1 cut(s) | 84 |
| BsuRI | GGCC | 1 cut(s) | 224 |
| BtsCI | GGATG | 2 cut(s) | 19, 312 |
| Cfr13I | GGNCC | 1 cut(s) | 222 |
| Csp6I | GTAC | 2 cut(s) | 200, 283 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 3 cut(s) | 77, 224, 407 |
| CviKI_1 | RGCY | 3 cut(s) | 77, 224, 407 |
| CviQI | GTAC | 2 cut(s) | 200, 283 |
| DpnI | GATC | 2 cut(s) | 86, 325 |
| DpnII | GATC | 2 cut(s) | 84, 323 |
| Eco130I | CCWWGG | 1 cut(s) | 352 |
| Eco24I | GRGCYC | 1 cut(s) | 409 |
| Eco57I | CTGAAG | 1 cut(s) | 161 |
| EcoT14I | CCWWGG | 1 cut(s) | 352 |
| EcoT22I | ATGCAT | 1 cut(s) | 314 |
| EcoT38I | GRGCYC | 1 cut(s) | 409 |
| ErhI | CCWWGG | 1 cut(s) | 352 |
| FaeI | CATG | 1 cut(s) | 115 |
| FaiI | YATR | 5 cut(s) | 108, 113, 212, 368, 418 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 393 |
| FatI | CATG | 1 cut(s) | 111 |
| FauI | CCCGC | 1 cut(s) | 3 |
| FokI | GGATG | 2 cut(s) | 26, 299 |
| FriOI | GRGCYC | 1 cut(s) | 409 |
| FspBI | CTAG | 1 cut(s) | 273 |
| HaeIII | GGCC | 1 cut(s) | 224 |
| Hin1II | CATG | 1 cut(s) | 115 |
| HincII | GTYRAC | 1 cut(s) | 147 |
| HindII | GTYRAC | 1 cut(s) | 147 |
| HphI | GGTGA | 2 cut(s) | 269, 311 |
| Hpy166II | GTNNAC | 1 cut(s) | 147 |
| Hpy188I | TCNGA | 3 cut(s) | 217, 248, 397 |
| Hpy188III | TCNNGA | 1 cut(s) | 69 |
| Hpy8I | GTNNAC | 1 cut(s) | 147 |
| HpyAV | CCTTC | 2 cut(s) | 326, 419 |
| HpyCH4III | ACNGT | 3 cut(s) | 41, 65, 151 |
| HpyCH4V | TGCA | 5 cut(s) | 93, 130, 169, 312, 370 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| Kzo9I | GATC | 2 cut(s) | 84, 323 |
| LmnI | GCTCC | 1 cut(s) | 404 |
| LpnPI | CCDG | 3 cut(s) | 86, 282, 387 |
| LweI | GCATC | 2 cut(s) | 117, 321 |
| MaeI | CTAG | 1 cut(s) | 273 |
| MalI | GATC | 2 cut(s) | 86, 325 |
| MboI | GATC | 2 cut(s) | 84, 323 |
| MflI | RGATCY | 1 cut(s) | 84 |
| MhlI | GDGCHC | 1 cut(s) | 409 |
| MnlI | CCTC | 1 cut(s) | 235 |
| Mph1103I | ATGCAT | 1 cut(s) | 314 |
| MseI | TTAA | 1 cut(s) | 116 |
| Mva1269I | GAATGC | 1 cut(s) | 314 |
| NdeII | GATC | 2 cut(s) | 84, 323 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NlaIV | GGNNCC | 1 cut(s) | 406 |
| NsiI | ATGCAT | 1 cut(s) | 314 |
| PctI | GAATGC | 1 cut(s) | 314 |
| PspN4I | GGNNCC | 1 cut(s) | 406 |
| PspPI | GGNCC | 1 cut(s) | 222 |
| PsuI | RGATCY | 1 cut(s) | 84 |
| RsaI | GTAC | 2 cut(s) | 201, 284 |
| RsaNI | GTAC | 2 cut(s) | 200, 283 |
| SaqAI | TTAA | 1 cut(s) | 116 |
| Sau3AI | GATC | 2 cut(s) | 84, 323 |
| Sau96I | GGNCC | 1 cut(s) | 222 |
| SduI | GDGCHC | 1 cut(s) | 409 |
| SetI | ASST | 2 cut(s) | 79, 376 |
| SfaNI | GCATC | 2 cut(s) | 117, 321 |
| SsiI | CCGC | 1 cut(s) | 10 |
| SspMI | CTAG | 1 cut(s) | 273 |
| StyI | CCWWGG | 1 cut(s) | 352 |
| TaaI | ACNGT | 3 cut(s) | 41, 65, 151 |
| TaqI | TCGA | 1 cut(s) | 125 |
| TatI | WGTACW | 1 cut(s) | 282 |
| Tru1I | TTAA | 1 cut(s) | 116 |
| Tru9I | TTAA | 1 cut(s) | 116 |
| TspDTI | ATGAA | 2 cut(s) | 30, 143 |
| XspI | CTAG | 1 cut(s) | 273 |
| Zsp2I | ATGCAT | 1 cut(s) | 314 |