mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G01435 AT3G01435 AT3G01435 AT3G01435 |
| fragaria_vesca | FvH4_2g07050 FvH4_2g07070 |
| malus_domestica | MD10G1088300.v1.1 |
| prunus_persica | Prupe.8G114900_v2.0.a1 Prupe.8G114900_v2.0.a1 Prupe.8G114900_v2.0.a1 Prupe.8G115200_v2.0.a1 |
| pyrus_communis | pycom10g07060 |
| rosa_chinensis | RchiOBHm_Chr6g0259451 RchiOBHm_Chr6g0259461 RchiOBHm_Chr7g0240711 |
| rosa_laevigata | RLG00000000624 RLG00000014531 RLG00000014532 RLG00000014533 |
| rosa_multiflora | Rmu_sc0006836.1_g000001 Rmu_sc0006836.1_g000005 Rmu_ssc0000050.1_g000040 |
| rosa_roxburghii | Rroxscaffold_3G00219640 Rroxscaffold_7G00206730 Rroxscaffold_7G00206740 |
| rosa_rugosa | Rorug05G0588800 Rorug05G0588900 Rorug07G0338400 |
| rosa_samantha | Rh6AG104700 Rh6BG097800 Rh6CG093800 Rh6DG087700 Rh7AG493100 Rh7BG465100 |
| rosa_wichuraiana | Rw6G009040 Rw6G009060 Rw6G009070 Rw7G041710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 43 |
| AfaI | GTAC | 2 cut(s) | 23, 202 |
| AgsI | TTSAA | 2 cut(s) | 32, 102 |
| AluBI | AGCT | 1 cut(s) | 110 |
| AluI | AGCT | 1 cut(s) | 110 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 77, 109 |
| BfaI | CTAG | 1 cut(s) | 188 |
| BglII | AGATCT | 1 cut(s) | 117 |
| BmsI | GCATC | 1 cut(s) | 154 |
| Bsa29I | ATCGAT | 1 cut(s) | 162 |
| Bse1I | ACTGG | 1 cut(s) | 138 |
| Bse3DI | GCAATG | 1 cut(s) | 38 |
| BseCI | ATCGAT | 1 cut(s) | 162 |
| BseGI | GGATG | 1 cut(s) | 52 |
| BseMI | GCAATG | 1 cut(s) | 38 |
| BseNI | ACTGG | 1 cut(s) | 138 |
| Bsh1285I | CGRYCG | 1 cut(s) | 162 |
| BshVI | ATCGAT | 1 cut(s) | 162 |
| BsiEI | CGRYCG | 1 cut(s) | 162 |
| Bsp1407I | TGTACA | 1 cut(s) | 200 |
| Bsp143I | GATC | 2 cut(s) | 117, 159 |
| BspACI | CCGC | 1 cut(s) | 43 |
| BspDI | ATCGAT | 1 cut(s) | 162 |
| BsrDI | GCAATG | 1 cut(s) | 38 |
| BsrGI | TGTACA | 1 cut(s) | 200 |
| BsrI | ACTGG | 1 cut(s) | 138 |
| BssMI | GATC | 2 cut(s) | 117, 159 |
| Bst4CI | ACNGT | 3 cut(s) | 74, 98, 178 |
| BstAUI | TGTACA | 1 cut(s) | 200 |
| BstF5I | GGATG | 1 cut(s) | 52 |
| BstKTI | GATC | 2 cut(s) | 120, 162 |
| BstMBI | GATC | 2 cut(s) | 117, 159 |
| BstMCI | CGRYCG | 1 cut(s) | 162 |
| BstX2I | RGATCY | 1 cut(s) | 117 |
| BstYI | RGATCY | 1 cut(s) | 117 |
| Bsu15I | ATCGAT | 1 cut(s) | 162 |
| BsuTUI | ATCGAT | 1 cut(s) | 162 |
| BtsCI | GGATG | 1 cut(s) | 52 |
| ClaI | ATCGAT | 1 cut(s) | 162 |
| Csp6I | GTAC | 2 cut(s) | 22, 201 |
| CviAII | CATG | 1 cut(s) | 145 |
| CviJI | RGCY | 1 cut(s) | 110 |
| CviKI_1 | RGCY | 1 cut(s) | 110 |
| CviQI | GTAC | 2 cut(s) | 22, 201 |
| DpnI | GATC | 2 cut(s) | 119, 161 |
| DpnII | GATC | 2 cut(s) | 117, 159 |
| FaeI | CATG | 1 cut(s) | 148 |
| FaiI | YATR | 4 cut(s) | 9, 141, 146, 217 |
| FatI | CATG | 1 cut(s) | 144 |
| FauI | CCCGC | 1 cut(s) | 36 |
| FokI | GGATG | 1 cut(s) | 59 |
| FspBI | CTAG | 1 cut(s) | 188 |
| FspEI | CC | 7 cut(s) | 20, 28, 29, 86, 90, 119, 174 |
| Hin1II | CATG | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 1 cut(s) | 102 |
| HpyCH4III | ACNGT | 3 cut(s) | 74, 98, 178 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 126, 167 |
| Hsp92II | CATG | 1 cut(s) | 148 |
| Kzo9I | GATC | 2 cut(s) | 117, 159 |
| LpnPI | CCDG | 1 cut(s) | 119 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 188 |
| MalI | GATC | 2 cut(s) | 119, 161 |
| MboI | GATC | 2 cut(s) | 117, 159 |
| MflI | RGATCY | 1 cut(s) | 117 |
| MluCI | AATT | 2 cut(s) | 10, 196 |
| MseI | TTAA | 2 cut(s) | 149, 212 |
| NdeII | GATC | 2 cut(s) | 117, 159 |
| NlaIII | CATG | 1 cut(s) | 148 |
| Ple19I | CGATCG | 1 cut(s) | 162 |
| PsuI | RGATCY | 1 cut(s) | 117 |
| PvuI | CGATCG | 1 cut(s) | 162 |
| RsaI | GTAC | 2 cut(s) | 23, 202 |
| RsaNI | GTAC | 2 cut(s) | 22, 201 |
| SaqAI | TTAA | 2 cut(s) | 149, 212 |
| Sau3AI | GATC | 2 cut(s) | 117, 159 |
| SetI | ASST | 1 cut(s) | 112 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SgeI | CNNG | 9 cut(s) | 56, 75, 114, 127, 139, 146, 157, 169, 200 |
| Sse9I | AATT | 2 cut(s) | 10, 196 |
| SsiI | CCGC | 1 cut(s) | 43 |
| SspMI | CTAG | 1 cut(s) | 188 |
| TaaI | ACNGT | 3 cut(s) | 74, 98, 178 |
| TaqI | TCGA | 2 cut(s) | 158, 162 |
| TasI | AATT | 2 cut(s) | 10, 196 |
| TatI | WGTACW | 1 cut(s) | 200 |
| Tru1I | TTAA | 2 cut(s) | 149, 212 |
| Tru9I | TTAA | 2 cut(s) | 149, 212 |
| TspDTI | ATGAA | 1 cut(s) | 63 |
| XspI | CTAG | 1 cut(s) | 188 |