pycom01g07030

Alcohol dehydrogenase GroES-like domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
7617672 .. 7622669
4998 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07030.4

Sequence Viewer

Length: 1302 bp
ATGTACCTGGGATCATTCAATACGGAAAAGGATCGCTGCCGGATCTTCTTTGTGGGGATCCAGCGGATCAAATCTGGCTATGCGTACTGGCTCTGCCCCCAACTTTTCTATATTTATACCGAAGCTTTAATCACTCTAACCGTGTTGTGGAGCACTCAACATATACACTTGAGAGATTACACTTTCTCCTCCCACTCACTCAGTGCTTCAAAAATGGCAAAGGCTCCGGAACTAGAACACCCTGTGAAGGCCTTTGGATGGGCTGCTAGAGACAAATCTGGCCACCTCTCTCCCTTTAACTTCTCCAGAAGATCAACAGGTGATGAGGACGTGAGGTTTAAGGTGTTGTATTGTGGGATATGCCACACTGATCTTCACAACATCAAGAATGAATGGGGTATCTCTTTGTACCCTATGGTTCCTGGGCACGAGATTGTGGGGGAAGTGACAGAAGTGGGAAGCAAGGTGAGTAAAGTGAAAGAAGGAGACAAAGTGGGTGTGGGCTGCATGGTTGGTGCTTGCCATGCATGCGAGAGCTGCAACAGCAACCTTGAAAACTACTGCCCCAAAATGATACTTACCTACGGTTCCATTTACGCCGACAGAACTGTCACATATGGAGGTTACTCGGACACAATGGTCGCCAATGAGCGCTACATTGTTCGTTTCCCCGAGAACCTGCCACTTGATGCTGGTGCTCCTCTACTTTGTGCAGGGATCACAGTTTATAGTCCCCTGAAGTATTTTGGCTTAGCCGAGCCTGGTAAGCATGTTGGCATTGTAGGCCTTGGCGGGCTTGGTCACGTCGGTGTGAAATTCGCTAAGGCCTTTGGGGCAAAAGTGACTGTGATTAGTACCTCCCCTAGCAAGAAAGATGAAGCTCTGAAGCGACTTGGGGCTGATTCATTCGTGGTTAGCCGCGACCCCCAGCAAATGCAGGCTGCCATAGGAACACTGGATGGCATCATCGACACAGTCTCAGCTGCGCATCCCATTGTGCCCTTACTTGGTCTTTTGAAGCCCCATGGGAAGCTTATTCTGGTGGGCATAGCAGATAAGCCACTTGACCTCCATGTGTTTCCTTTAATCATGGGAAGGAAGTCGGTGGCGGGTAGTGGAATCGGAGGAATGAAGGAGACCCAAGAAATGATTGATTTTGCAGCAAAACATAACATAACGGCGGAGGTTGAAGTTATCTCAATGGATTACGTGAACACAGCAATGGAGCGTCTCGCTAAGAATGACGTTAGATACCGATTTGTGATTGATGTTGGAAACACACTGGCTGCTAGCGAAGATTGA

Protein Analysis

434

Amino Acids

47.32

Weight (kDa)

7.6

Isoelectric Point (pI)

29.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 608, 638
Acc16I TGCGCA 1 cut(s) 987
Acc36I ACCTGC 1 cut(s) 687
AccII CGCG 1 cut(s) 921
AccIII TCCGGA 1 cut(s) 226
AciI CCGC 5 cut(s) 64, 792, 919, 1109, 1181
AclWI GGATC 7 cut(s) 19, 39, 50, 52, 65, 74, 725
AcoI YGGCCR 1 cut(s) 280
AcsI RAATTY 1 cut(s) 815
AcuI CTGAAG 2 cut(s) 758, 905
AdeI CACNNNGTG 2 cut(s) 203, 244
AfaI GTAC 4 cut(s) 5, 86, 410, 856
AfeI AGCGCT 1 cut(s) 653
AfiI CCNNNNNNNGG 4 cut(s) 147, 247, 258, 1007
AgsI TTSAA 5 cut(s) 19, 210, 554, 1018, 1190
AjiI CACGTC 2 cut(s) 331, 805
AjnI CCWGG 3 cut(s) 6, 421, 760
AleI CACNNNNGTG 1 cut(s) 807
AluBI AGCT 5 cut(s) 125, 537, 881, 983, 1033
AluI AGCT 5 cut(s) 125, 537, 881, 983, 1033
Alw21I GWGCWC 2 cut(s) 155, 700
Alw26I GTCTC 5 cut(s) 264, 480, 982, 1130, 1235
AlwI GGATC 7 cut(s) 19, 39, 50, 52, 65, 74, 725
Ama87I CYCGRG 1 cut(s) 671
Aor13HI TCCGGA 1 cut(s) 226
Aor51HI AGCGCT 1 cut(s) 653
AoxI GGCC 4 cut(s) 249, 280, 784, 825
ApeKI GCWGC 8 cut(s) 36, 263, 504, 537, 941, 983, 1160, 1286
ApoI RAATTY 1 cut(s) 815
AspLEI GCGC 2 cut(s) 654, 988
AsuHPI GGTGA 2 cut(s) 332, 478
AsuNHI GCTAGC 1 cut(s) 1289
AvaI CYCGRG 1 cut(s) 671
BaeGI GKGCMC 2 cut(s) 429, 1002
BalI TGGCCA 1 cut(s) 282
BamHI GGATCC 1 cut(s) 57
BauI CACGAG 1 cut(s) 428
Bbv12I GWGCWC 2 cut(s) 155, 700
BbvI GCAGC 8 cut(s) 23, 250, 491, 524, 928, 970, 1172, 1273
BccI CCATC 2 cut(s) 252, 953
BceAI ACGGC 1 cut(s) 1194
BciT130I CCWGG 3 cut(s) 8, 423, 762
BcoDI GTCTC 5 cut(s) 264, 480, 982, 1130, 1235
BfaI CTAG 4 cut(s) 233, 267, 864, 1290
BfoI RGCGCY 1 cut(s) 655
BfuAI ACCTGC 1 cut(s) 687
BglI GCCNNNNNGGC 1 cut(s) 833
BisI GCNGC 9 cut(s) 37, 264, 505, 538, 919, 942, 984, 1161, 1287
BlpI GCTNAGC 1 cut(s) 751
BlsI GCNGC 9 cut(s) 38, 265, 506, 539, 920, 943, 985, 1162, 1288
Bme1390I CCNGG 3 cut(s) 8, 423, 762
BmeT110I CYCGRG 1 cut(s) 671
BmgBI CACGTC 2 cut(s) 331, 805
BmiI GGNNCC 4 cut(s) 59, 225, 420, 589
BmrFI CCNGG 3 cut(s) 8, 423, 762
BmsI GCATC 3 cut(s) 679, 972, 997
BmtI GCTAGC 1 cut(s) 1293
BpmI CTGGAG 1 cut(s) 289
Bpu10I CCTNAGC 1 cut(s) 822
Bpu1102I GCTNAGC 1 cut(s) 751
BpuEI CTTGAG 1 cut(s) 190
BsaAI YACGTR 1 cut(s) 1210
BsaI GGTCTC 1 cut(s) 1130
BsaJI CCNNGG 4 cut(s) 7, 422, 787, 1024
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 6 cut(s) 170, 200, 477, 507, 1053, 1083
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 247, 258, 1007
Bse1I ACTGG 3 cut(s) 92, 960, 1287
Bse3DI GCAATG 1 cut(s) 1227
BseAI TCCGGA 1 cut(s) 226
BseBI CCWGG 3 cut(s) 8, 423, 762
BseDI CCNNGG 4 cut(s) 7, 422, 787, 1024
BseGI GGATG 3 cut(s) 263, 964, 988
BseLI CCNNNNNNNGG 4 cut(s) 147, 247, 258, 1007
BseMI GCAATG 1 cut(s) 1227
BseMII CTCAG 2 cut(s) 214, 993
BseNI ACTGG 3 cut(s) 92, 960, 1287
BseRI GAGGAG 2 cut(s) 178, 690
BseSI GKGCMC 2 cut(s) 429, 1002
BseXI GCAGC 8 cut(s) 23, 250, 491, 524, 928, 970, 1172, 1273
BseYI CCCAGC 1 cut(s) 927
BsgI GTGCAG 1 cut(s) 732
Bsh1236I CGCG 1 cut(s) 921
BshFI GGCC 4 cut(s) 251, 282, 786, 827
BsiHKAI GWGCWC 2 cut(s) 155, 700
BsiHKCI CYCGRG 1 cut(s) 671
BsiSI CCGG 2 cut(s) 40, 227
BslFI GGGAC 1 cut(s) 717
BslI CCNNNNNNNGG 4 cut(s) 147, 247, 258, 1007
BsmAI GTCTC 5 cut(s) 264, 480, 982, 1130, 1235
BsmBI CGTCTC 1 cut(s) 1235
BsmFI GGGAC 1 cut(s) 717
BsnI GGCC 4 cut(s) 251, 282, 786, 827
Bso31I GGTCTC 1 cut(s) 1130
BsoBI CYCGRG 1 cut(s) 671
Bsp1286I GDGCHC 4 cut(s) 155, 429, 700, 1002
Bsp13I TCCGGA 1 cut(s) 226
Bsp143I GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
Bsp1720I GCTNAGC 1 cut(s) 751
Bsp19I CCATGG 1 cut(s) 1024
BspACI CCGC 5 cut(s) 64, 792, 919, 1109, 1181
BspANI GGCC 4 cut(s) 251, 282, 786, 827
BspCNI CTCAG 2 cut(s) 213, 992
BspEI TCCGGA 1 cut(s) 226
BspFNI CGCG 1 cut(s) 921
BspLI GGNNCC 4 cut(s) 59, 225, 420, 589
BspMI ACCTGC 1 cut(s) 687
BspOI GCTAGC 1 cut(s) 1293
BspPI GGATC 7 cut(s) 19, 39, 50, 52, 65, 74, 725
BspTNI GGTCTC 1 cut(s) 1130
BsrDI GCAATG 1 cut(s) 1227
BsrI ACTGG 3 cut(s) 92, 960, 1287
BssECI CCNNGG 4 cut(s) 7, 422, 787, 1024
BssMI GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
BssSI CACGAG 1 cut(s) 428
BssT1I CCWWGG 2 cut(s) 787, 1024
Bst2BI CACGAG 1 cut(s) 428
Bst2UI CCWGG 3 cut(s) 8, 423, 762
Bst4CI ACNGT 6 cut(s) 142, 587, 610, 724, 847, 976
BstBAI YACGTR 1 cut(s) 1210
BstC8I GCNNGC 5 cut(s) 520, 529, 794, 939, 1291
BstDEI CTNAG 5 cut(s) 200, 751, 822, 979, 1236
BstDSI CCRYGG 1 cut(s) 1024
BstF5I GGATG 3 cut(s) 263, 964, 988
BstFNI CGCG 1 cut(s) 921
BstH2I RGCGCY 1 cut(s) 655
BstHHI GCGC 2 cut(s) 654, 988
BstKTI GATC 8 cut(s) 14, 34, 45, 60, 69, 314, 373, 720
BstMAI GTCTC 5 cut(s) 264, 480, 982, 1130, 1235
BstMBI GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
BstMWI GCNNNNNNNGC 7 cut(s) 524, 528, 537, 543, 766, 783, 833
BstNI CCWGG 3 cut(s) 8, 423, 762
BstNSI RCATGY 2 cut(s) 531, 773
BstSCI CCNGG 3 cut(s) 6, 421, 760
BstSLI GKGCMC 2 cut(s) 429, 1002
BstUI CGCG 1 cut(s) 921
BstV1I GCAGC 8 cut(s) 23, 250, 491, 524, 928, 970, 1172, 1273
BstX2I RGATCY 2 cut(s) 42, 57
BstYI RGATCY 2 cut(s) 42, 57
BsuRI GGCC 4 cut(s) 251, 282, 786, 827
BtgI CCRYGG 1 cut(s) 1024
BtrI CACGTC 2 cut(s) 331, 805
BtsCI GGATG 3 cut(s) 263, 964, 988
BtsIMutI CAGTG 4 cut(s) 208, 366, 953, 1280
BveI ACCTGC 1 cut(s) 687
Cac8I GCNNGC 5 cut(s) 520, 529, 794, 939, 1291
CfoI GCGC 2 cut(s) 654, 988
CseI GACGC 1 cut(s) 1217
Csp6I GTAC 4 cut(s) 4, 85, 409, 855
CviAII CATG 7 cut(s) 508, 524, 528, 770, 1025, 1073, 1090
CviQI GTAC 4 cut(s) 4, 85, 409, 855
DdeI CTNAG 5 cut(s) 200, 751, 822, 979, 1236
DpnI GATC 8 cut(s) 13, 33, 44, 59, 68, 313, 372, 719
DpnII GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
DraIII CACNNNGTG 2 cut(s) 203, 244
DrdI GACNNNNNNGTC 2 cut(s) 608, 638
DseDI GACNNNNNNGTC 2 cut(s) 608, 638
EaeI YGGCCR 1 cut(s) 280
EciI GGCGGA 1 cut(s) 1196
Eco130I CCWWGG 2 cut(s) 787, 1024
Eco147I AGGCCT 3 cut(s) 251, 786, 827
Eco31I GGTCTC 1 cut(s) 1130
Eco47III AGCGCT 1 cut(s) 653
Eco57I CTGAAG 2 cut(s) 758, 905
Eco88I CYCGRG 1 cut(s) 671
EcoRII CCWGG 3 cut(s) 6, 421, 760
EcoT14I CCWWGG 2 cut(s) 787, 1024
EcoT22I ATGCAT 1 cut(s) 529
ErhI CCWWGG 2 cut(s) 787, 1024
Esp3I CGTCTC 1 cut(s) 1235
FaeI CATG 7 cut(s) 511, 527, 531, 773, 1028, 1076, 1093
FaqI GGGAC 1 cut(s) 717
FatI CATG 7 cut(s) 507, 523, 527, 769, 1024, 1072, 1089
FauI CCCGC 2 cut(s) 785, 1102
FauNDI CATATG 1 cut(s) 616
Fnu4HI GCNGC 9 cut(s) 37, 264, 505, 538, 919, 942, 984, 1161, 1287
FokI GGATG 3 cut(s) 270, 971, 975
Fsp4HI GCNGC 9 cut(s) 37, 264, 505, 538, 919, 942, 984, 1161, 1287
FspBI CTAG 4 cut(s) 233, 267, 864, 1290
FspI TGCGCA 1 cut(s) 987
GlaI GCGC 2 cut(s) 653, 987
GluI GCNGC 9 cut(s) 37, 264, 505, 538, 919, 942, 984, 1161, 1287
GsaI CCCAGC 1 cut(s) 931
GsuI CTGGAG 1 cut(s) 289
HaeII RGCGCY 1 cut(s) 655
HaeIII GGCC 4 cut(s) 251, 282, 786, 827
HapII CCGG 2 cut(s) 40, 227
HgaI GACGC 1 cut(s) 1217
HhaI GCGC 2 cut(s) 654, 988
Hin1II CATG 7 cut(s) 511, 527, 531, 773, 1028, 1076, 1093
Hin6I GCGC 2 cut(s) 652, 986
HinP1I GCGC 2 cut(s) 652, 986
HindIII AAGCTT 2 cut(s) 123, 1031
HinfI GANTC 2 cut(s) 902, 1119
HpaII CCGG 2 cut(s) 40, 227
HphI GGTGA 2 cut(s) 332, 478
Hpy166II GTNNAC 1 cut(s) 1213
Hpy188I TCNGA 3 cut(s) 631, 885, 1124
Hpy188III TCNNGA 3 cut(s) 227, 306, 385
Hpy8I GTNNAC 1 cut(s) 1213
Hpy99I CGWCG 1 cut(s) 809
HpyAV CCTTC 4 cut(s) 241, 476, 1089, 1126
HpyCH4III ACNGT 6 cut(s) 142, 587, 610, 724, 847, 976
HpyCH4IV ACGT 4 cut(s) 330, 804, 1209, 1245
HpyCH4V TGCA 6 cut(s) 507, 527, 540, 713, 937, 1160
HpyF10VI GCNNNNNNNGC 7 cut(s) 524, 528, 537, 543, 766, 783, 833
HpyF3I CTNAG 5 cut(s) 200, 751, 822, 979, 1236
HpySE526I ACGT 4 cut(s) 330, 804, 1209, 1245
Hsp92II CATG 7 cut(s) 511, 527, 531, 773, 1028, 1076, 1093
HspAI GCGC 2 cut(s) 652, 986
Kpn2I TCCGGA 1 cut(s) 226
Kzo9I GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
LmnI GCTCC 4 cut(s) 150, 229, 703, 1225
Lsp1109I GCAGC 8 cut(s) 23, 250, 491, 524, 928, 970, 1172, 1273
LweI GCATC 3 cut(s) 679, 972, 997
MaeI CTAG 4 cut(s) 233, 267, 864, 1290
MaeII ACGT 4 cut(s) 330, 804, 1209, 1245
MaeIII GTNAC 5 cut(s) 445, 610, 623, 800, 841
MalI GATC 8 cut(s) 13, 33, 44, 59, 68, 313, 372, 719
MboI GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
MboII GAAGA 3 cut(s) 37, 321, 365
MflI RGATCY 2 cut(s) 42, 57
MhlI GDGCHC 4 cut(s) 155, 429, 700, 1002
MlsI TGGCCA 1 cut(s) 282
MluCI AATT 1 cut(s) 815
MluNI TGGCCA 1 cut(s) 282
MmeI TCCRAC 1 cut(s) 1252
Mox20I TGGCCA 1 cut(s) 282
Mph1103I ATGCAT 1 cut(s) 529
MroI TCCGGA 1 cut(s) 226
MscI TGGCCA 1 cut(s) 282
MseI TTAA 4 cut(s) 128, 297, 339, 1085
MslI CAYNNNNRTG 2 cut(s) 807, 1220
Msp20I TGGCCA 1 cut(s) 282
MspA1I CMGCKG 2 cut(s) 64, 983
MspI CCGG 2 cut(s) 40, 227
MspR9I CCNGG 3 cut(s) 8, 423, 762
MvaI CCWGG 3 cut(s) 8, 423, 762
MvnI CGCG 1 cut(s) 921
MwoI GCNNNNNNNGC 7 cut(s) 524, 528, 537, 543, 766, 783, 833
NcoI CCATGG 1 cut(s) 1024
NdeI CATATG 1 cut(s) 616
NdeII GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
NheI GCTAGC 1 cut(s) 1289
NlaIII CATG 7 cut(s) 511, 527, 531, 773, 1028, 1076, 1093
NlaIV GGNNCC 4 cut(s) 59, 225, 420, 589
NmeAIII GCCGAG 1 cut(s) 781
NmuCI GTSAC 4 cut(s) 445, 610, 800, 841
NsbI TGCGCA 1 cut(s) 987
NsiI ATGCAT 1 cut(s) 529
NspI RCATGY 2 cut(s) 531, 773
OliI CACNNNNGTG 1 cut(s) 807
PaeI GCATGC 1 cut(s) 531
PceI AGGCCT 3 cut(s) 251, 786, 827
PfeI GAWTC 2 cut(s) 902, 1119
PflFI GACNNNGTC 1 cut(s) 974
PkrI GCNGC 9 cut(s) 38, 265, 506, 539, 920, 943, 985, 1162, 1288
Ppu21I YACGTR 1 cut(s) 1210
Psp6I CCWGG 3 cut(s) 6, 421, 760
PspFI CCCAGC 1 cut(s) 927
PspGI CCWGG 3 cut(s) 6, 421, 760
PspN4I GGNNCC 4 cut(s) 59, 225, 420, 589
PsuI RGATCY 2 cut(s) 42, 57
PsyI GACNNNGTC 1 cut(s) 974
PvuII CAGCTG 1 cut(s) 983
RsaI GTAC 4 cut(s) 5, 86, 410, 856
RsaNI GTAC 4 cut(s) 4, 85, 409, 855
RseI CAYNNNNRTG 2 cut(s) 807, 1220
SaqAI TTAA 4 cut(s) 128, 297, 339, 1085
SatI GCNGC 9 cut(s) 37, 264, 505, 538, 919, 942, 984, 1161, 1287
Sau3AI GATC 8 cut(s) 11, 31, 42, 57, 66, 311, 370, 717
ScrFI CCNGG 3 cut(s) 8, 423, 762
SduI GDGCHC 4 cut(s) 155, 429, 700, 1002
SfaNI GCATC 3 cut(s) 679, 972, 997
SmiMI CAYNNNNRTG 2 cut(s) 807, 1220
SmlI CTYRAG 1 cut(s) 169
SmoI CTYRAG 1 cut(s) 169
SphI GCATGC 1 cut(s) 531
Sse9I AATT 1 cut(s) 815
SseBI AGGCCT 3 cut(s) 251, 786, 827
SsiI CCGC 5 cut(s) 64, 792, 919, 1109, 1181
SspMI CTAG 4 cut(s) 233, 267, 864, 1290
StuI AGGCCT 3 cut(s) 251, 786, 827
StyD4I CCNGG 3 cut(s) 6, 421, 760
StyI CCWWGG 2 cut(s) 787, 1024
TaaI ACNGT 6 cut(s) 142, 587, 610, 724, 847, 976
TaiI ACGT 4 cut(s) 333, 807, 1212, 1248
TaqI TCGA 1 cut(s) 969
TasI AATT 1 cut(s) 815
TauI GCSGC 1 cut(s) 921
TfiI GAWTC 2 cut(s) 902, 1119
Tru1I TTAA 4 cut(s) 128, 297, 339, 1085
Tru9I TTAA 4 cut(s) 128, 297, 339, 1085
TscAI CASTG 4 cut(s) 208, 373, 960, 1287
TseFI GTSAC 4 cut(s) 445, 610, 800, 841
TseI GCWGC 8 cut(s) 36, 263, 504, 537, 941, 983, 1160, 1286
Tsp45I GTSAC 4 cut(s) 445, 610, 800, 841
TspDTI ATGAA 4 cut(s) 405, 891, 894, 1145
TspGWI ACGGA 1 cut(s) 38
TspRI CASTG 4 cut(s) 208, 373, 960, 1287
Tth111I GACNNNGTC 1 cut(s) 974
XapI RAATTY 1 cut(s) 815
XceI RCATGY 2 cut(s) 531, 773
XcmI CCANNNNNNNNNTGG 1 cut(s) 952
XspI CTAG 4 cut(s) 233, 267, 864, 1290
Zsp2I ATGCAT 1 cut(s) 529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.