RLG00000017807

Alcohol dehydrogenase GroES-like domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
21550331 .. 21552887
2557 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017807

Sequence Viewer

Length: 1200 bp
ATGAGTGTGCCTCCCCCATTCTATTTATATCAGAACTTTTGCTCGAGTTTCGTAAGCATTCCTTCACGGGGGCTGGGGCTTCACCTTCTTCATTGCTTTCACCTTTTTGAAGCATTATCAGTGAACACTCCATCGCCGATTACCCTGATGGTGATCATGACACCGGACACAGAGCACCCTGTGAAGGCCTTTGGCTGGGCCGCTAGAGACCCATCTGGGCATCTCTCTCCCTTTAACTTCTCCAGAAGAGAAACAGGTGATGAAGACGTGAGGTTTAAGGTGCTGTACTGTGGGATATGCCACACTGACCTGAGCAATCTCAAGAATGAACGGGGATTATCAAAGTACCCTATAGTTCCCGGGCACGAGATAGTGGGAGAAGTAACAGAAGTAGGAAGCGAGGTGAAGAAAGTAAAAGTGGGAGATAAAGTGGGCGTGGGTGGTGTTGTTGGAGCATGCCATGACTGCTGCAAATGTGACAATGACCTTGAAATTTACTGCCCCAAATCGACTTTAACCTATGGTGACATTTACCACGATGGAACAGTAACATATGGAGGTTACTCTGATTCGATGGTTGCCAGCGAGCGCTACATCATCCACTTTCCAGACAACATGCCGCTAGCCGCTGGAGCACCTCTACTCTGTGCTGGGATCACAATGTATAGTCCCTTGAAGTACTTTGGGTTAGCGGAGCCGGGTATGCAGATTGGCATTGTTGGCCTTGGTGGGCTAGGTCATGTGGGTGTGAAATTTGCTAAGGCTTTTGGGGCAAAAGTGACTGTGATTAGTACATCCCCTAGCAAGAAAGATGAAGCATTGAAACAATTTGGTGCTGATTCGTTCTTGGTCAGCCGCAACGACAACGAAATGCAGTCTGCTGTGCATGCCATTTCGCCCTTGATTGACCTTTTAAAGTCCGATGGCAAGCTTATTATGCTGGGAGCACCAGACAAGCCACTAGAACTAGACGTCTATCCTCTACTCATGGGAAGGAAGTTGGTGGCCGGTAGTGCAATCGGCGGCATGAAGGAGACTCAAGAGATGATTGATTTTGCCACAGAGCACAACATAACTGCGGATATTGAGGTTATTCCAATGGACTATTTGAACACGGCAATGGAGCGTCTTGCTAAGAATGATGTTAGATACCGCTTTGTGGTCGACGTCGGAAACACTCTGGCTGCTACCAAGCCCTGA

Protein Analysis

400

Amino Acids

43.27

Weight (kDa)

5.81

Isoelectric Point (pI)

28.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 86 - 204 1e-21 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 244 - 297 6.1e-08 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 975, 1170
AccI GTMKAC 1 cut(s) 1164
AciI CCGC 8 cut(s) 201, 620, 627, 692, 856, 1023, 1079, 1153
AclWI GGATC 1 cut(s) 662
AcoI YGGCCR 1 cut(s) 1005
AcsI RAATTY 2 cut(s) 492, 752
AcyI GRCGYC 2 cut(s) 972, 1167
AdeI CACNNNGTG 1 cut(s) 181
AfaI GTAC 4 cut(s) 287, 347, 680, 793
AfeI AGCGCT 1 cut(s) 590
AfiI CCNNNNNNNGG 4 cut(s) 68, 184, 195, 1159
AgsI TTSAA 5 cut(s) 110, 491, 676, 823, 1111
AjiI CACGTC 1 cut(s) 268
AluBI AGCT 1 cut(s) 931
AluI AGCT 1 cut(s) 931
Alw21I GWGCWC 4 cut(s) 177, 637, 949, 1068
Alw26I GTCTC 2 cut(s) 201, 1028
AlwI GGATC 1 cut(s) 662
Ama87I CYCGRG 2 cut(s) 43, 359
Aor51HI AGCGCT 1 cut(s) 590
AoxI GGCC 4 cut(s) 186, 198, 721, 1005
ApeKI GCWGC 2 cut(s) 468, 1184
ApoI RAATTY 2 cut(s) 492, 752
AspLEI GCGC 1 cut(s) 591
AspS9I GGNCC 1 cut(s) 198
AsuC2I CCSGG 3 cut(s) 360, 361, 699
AsuHPI GGTGA 6 cut(s) 74, 92, 163, 269, 415, 536
AsuNHI GCTAGC 1 cut(s) 622
AvaI CYCGRG 2 cut(s) 43, 359
BaeGI GKGCMC 1 cut(s) 366
BauI CACGAG 1 cut(s) 365
BbsI GAAGAC 1 cut(s) 270
Bbv12I GWGCWC 4 cut(s) 177, 637, 949, 1068
BbvI GCAGC 2 cut(s) 455, 1171
BccI CCATC 6 cut(s) 139, 142, 220, 533, 568, 917
BceAI ACGGC 1 cut(s) 1131
BclI TGATCA 1 cut(s) 153
BcnI CCSGG 3 cut(s) 360, 361, 699
BcoDI GTCTC 2 cut(s) 201, 1028
BfaI CTAG 6 cut(s) 204, 623, 734, 801, 962, 968
BfmI CTRYAG 1 cut(s) 351
BfoI RGCGCY 1 cut(s) 592
BisI GCNGC 7 cut(s) 201, 469, 620, 627, 856, 1024, 1185
BlsI GCNGC 7 cut(s) 202, 470, 621, 628, 857, 1025, 1186
BmcAI AGTACT 1 cut(s) 680
Bme1390I CCNGG 3 cut(s) 360, 361, 699
BmeT110I CYCGRG 2 cut(s) 43, 359
BmgBI CACGTC 1 cut(s) 268
BmgT120I GGNCC 1 cut(s) 198
BmiI GGNNCC 1 cut(s) 696
BmrFI CCNGG 3 cut(s) 360, 361, 699
BmsI GCATC 1 cut(s) 229
BmtI GCTAGC 1 cut(s) 626
BpiI GAAGAC 1 cut(s) 270
BplI GAGNNNNNCTC 1 cut(s) 27
BpmI CTGGAG 2 cut(s) 226, 651
Bpu10I CCTNAGC 2 cut(s) 311, 759
BpuEI CTTGAG 2 cut(s) 305, 1023
BpuMI CCSGG 3 cut(s) 360, 361, 699
BsaBI GATNNNNATC 1 cut(s) 152
BsaHI GRCGYC 2 cut(s) 972, 1167
BsaI GGTCTC 1 cut(s) 201
BsaJI CCNNGG 2 cut(s) 359, 724
BsaWI WCCGGW 1 cut(s) 163
BsaXI ACNNNNNCTCC 2 cut(s) 414, 444
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 184, 195, 1159
Bse118I RCCGGY 1 cut(s) 1007
Bse3DI GCAATG 2 cut(s) 91, 1125
Bse8I GATNNNNATC 1 cut(s) 152
BseDI CCNNGG 2 cut(s) 359, 724
BseGI GGATG 2 cut(s) 597, 794
BseJI GATNNNNATC 1 cut(s) 152
BseLI CCNNNNNNNGG 4 cut(s) 68, 184, 195, 1159
BseMI GCAATG 2 cut(s) 91, 1125
BseMII CTCAG 1 cut(s) 302
BseSI GKGCMC 1 cut(s) 366
BseXI GCAGC 2 cut(s) 455, 1171
BseYI CCCAGC 4 cut(s) 73, 195, 650, 940
BshFI GGCC 4 cut(s) 188, 200, 723, 1007
BsiHKAI GWGCWC 4 cut(s) 177, 637, 949, 1068
BsiHKCI CYCGRG 2 cut(s) 43, 359
BsiSI CCGG 4 cut(s) 164, 360, 698, 1008
BslFI GGGAC 1 cut(s) 654
BslI CCNNNNNNNGG 4 cut(s) 68, 184, 195, 1159
BsmAI GTCTC 2 cut(s) 201, 1028
BsmFI GGGAC 1 cut(s) 654
BsmI GAATGC 1 cut(s) 57
BsnI GGCC 4 cut(s) 188, 200, 723, 1007
Bso31I GGTCTC 1 cut(s) 201
BsoBI CYCGRG 2 cut(s) 43, 359
Bsp1286I GDGCHC 5 cut(s) 177, 366, 637, 949, 1068
Bsp143I GATC 2 cut(s) 153, 654
BspACI CCGC 8 cut(s) 201, 620, 627, 692, 856, 1023, 1079, 1153
BspANI GGCC 4 cut(s) 188, 200, 723, 1007
BspCNI CTCAG 1 cut(s) 303
BspHI TCATGA 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 696
BspOI GCTAGC 1 cut(s) 626
BspPI GGATC 1 cut(s) 662
BspTNI GGTCTC 1 cut(s) 201
BsrDI GCAATG 2 cut(s) 91, 1125
BsrFI RCCGGY 1 cut(s) 1007
BssAI RCCGGY 1 cut(s) 1007
BssECI CCNNGG 2 cut(s) 359, 724
BssMI GATC 2 cut(s) 153, 654
BssNI GRCGYC 2 cut(s) 972, 1167
BssSI CACGAG 1 cut(s) 365
BssT1I CCWWGG 1 cut(s) 724
Bst2BI CACGAG 1 cut(s) 365
Bst4CI ACNGT 3 cut(s) 290, 547, 784
Bst6I CTCTTC 1 cut(s) 241
BstACI GRCGYC 2 cut(s) 972, 1167
BstC8I GCNNGC 6 cut(s) 457, 583, 587, 624, 888, 929
BstDEI CTNAG 3 cut(s) 311, 759, 1134
BstF5I GGATG 2 cut(s) 597, 794
BstH2I RGCGCY 1 cut(s) 592
BstHHI GCGC 1 cut(s) 591
BstKTI GATC 2 cut(s) 156, 657
BstMAI GTCTC 2 cut(s) 201, 1028
BstMBI GATC 2 cut(s) 153, 654
BstMWI GCNNNNNNNGC 8 cut(s) 465, 632, 703, 720, 770, 887, 937, 1013
BstNSI RCATGY 3 cut(s) 459, 619, 890
BstSCI CCNGG 3 cut(s) 358, 359, 697
BstSFI CTRYAG 1 cut(s) 351
BstSLI GKGCMC 1 cut(s) 366
BstV1I GCAGC 2 cut(s) 455, 1171
BstV2I GAAGAC 1 cut(s) 270
BsuRI GGCC 4 cut(s) 188, 200, 723, 1007
BtgZI GCGATG 1 cut(s) 117
BtrI CACGTC 1 cut(s) 268
BtsCI GGATG 2 cut(s) 597, 794
BtsIMutI CAGTG 2 cut(s) 126, 303
Cac8I GCNNGC 6 cut(s) 457, 583, 587, 624, 888, 929
CciI TCATGA 1 cut(s) 156
CfoI GCGC 1 cut(s) 591
Cfr10I RCCGGY 1 cut(s) 1007
Cfr13I GGNCC 1 cut(s) 198
Cfr9I CCCGGG 1 cut(s) 359
CseI GACGC 1 cut(s) 1115
Csp6I GTAC 4 cut(s) 286, 346, 679, 792
CviAII CATG 8 cut(s) 157, 456, 461, 616, 740, 887, 988, 1027
CviQI GTAC 4 cut(s) 286, 346, 679, 792
DdeI CTNAG 3 cut(s) 311, 759, 1134
DpnI GATC 2 cut(s) 155, 656
DpnII GATC 2 cut(s) 153, 654
DraI TTTAAA 1 cut(s) 915
DraIII CACNNNGTG 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 1005
Eam1104I CTCTTC 1 cut(s) 241
EarI CTCTTC 1 cut(s) 241
Eco130I CCWWGG 1 cut(s) 724
Eco147I AGGCCT 1 cut(s) 188
Eco31I GGTCTC 1 cut(s) 201
Eco47III AGCGCT 1 cut(s) 590
Eco88I CYCGRG 2 cut(s) 43, 359
EcoT14I CCWWGG 1 cut(s) 724
ErhI CCWWGG 1 cut(s) 724
FaeI CATG 8 cut(s) 160, 459, 464, 619, 743, 890, 991, 1030
FalI AAGNNNNNCTT 2 cut(s) 46, 78
FaqI GGGAC 1 cut(s) 654
FatI CATG 8 cut(s) 156, 455, 460, 615, 739, 886, 987, 1026
FauNDI CATATG 1 cut(s) 553
FbaI TGATCA 1 cut(s) 153
FblI GTMKAC 1 cut(s) 1164
Fnu4HI GCNGC 7 cut(s) 201, 469, 620, 627, 856, 1024, 1185
FokI GGATG 2 cut(s) 584, 781
Fsp4HI GCNGC 7 cut(s) 201, 469, 620, 627, 856, 1024, 1185
FspBI CTAG 6 cut(s) 204, 623, 734, 801, 962, 968
GlaI GCGC 1 cut(s) 590
GluI GCNGC 7 cut(s) 201, 469, 620, 627, 856, 1024, 1185
GsaI CCCAGC 4 cut(s) 77, 199, 654, 944
GsuI CTGGAG 2 cut(s) 226, 651
HaeII RGCGCY 1 cut(s) 592
HaeIII GGCC 4 cut(s) 188, 200, 723, 1007
HapII CCGG 4 cut(s) 164, 360, 698, 1008
HgaI GACGC 1 cut(s) 1115
HhaI GCGC 1 cut(s) 591
Hin1I GRCGYC 2 cut(s) 972, 1167
Hin1II CATG 8 cut(s) 160, 459, 464, 619, 743, 890, 991, 1030
Hin6I GCGC 1 cut(s) 589
HinP1I GCGC 1 cut(s) 589
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 3 cut(s) 569, 839, 1036
HpaII CCGG 4 cut(s) 164, 360, 698, 1008
HphI GGTGA 6 cut(s) 74, 92, 163, 269, 415, 536
Hpy166II GTNNAC 2 cut(s) 124, 1165
Hpy188I TCNGA 4 cut(s) 33, 568, 922, 1172
Hpy188III TCNNGA 5 cut(s) 157, 243, 322, 608, 1040
Hpy8I GTNNAC 2 cut(s) 124, 1165
Hpy99I CGWCG 2 cut(s) 1169, 1172
HpyAV CCTTC 5 cut(s) 72, 95, 178, 987, 1024
HpyCH4III ACNGT 3 cut(s) 290, 547, 784
HpyCH4IV ACGT 3 cut(s) 267, 972, 1167
HpyCH4V TGCA 5 cut(s) 471, 706, 874, 886, 1016
HpyF10VI GCNNNNNNNGC 8 cut(s) 465, 632, 703, 720, 770, 887, 937, 1013
HpyF3I CTNAG 3 cut(s) 311, 759, 1134
HpySE526I ACGT 3 cut(s) 267, 972, 1167
Hsp92I GRCGYC 2 cut(s) 972, 1167
Hsp92II CATG 8 cut(s) 160, 459, 464, 619, 743, 890, 991, 1030
HspAI GCGC 1 cut(s) 589
Ksp22I TGATCA 1 cut(s) 153
Kzo9I GATC 2 cut(s) 153, 654
LmnI GCTCC 5 cut(s) 452, 632, 694, 944, 1123
Lsp1109I GCAGC 2 cut(s) 455, 1171
LweI GCATC 1 cut(s) 229
MaeI CTAG 6 cut(s) 204, 623, 734, 801, 962, 968
MaeII ACGT 3 cut(s) 267, 972, 1167
MaeIII GTNAC 6 cut(s) 382, 476, 524, 547, 560, 778
MalI GATC 2 cut(s) 155, 656
MboI GATC 2 cut(s) 153, 654
MboII GAAGA 4 cut(s) 80, 258, 275, 418
MhlI GDGCHC 5 cut(s) 177, 366, 637, 949, 1068
MluCI AATT 3 cut(s) 492, 752, 827
MlyI GAGTC 1 cut(s) 1030
MmeI TCCRAC 2 cut(s) 430, 1150
MnlI CCTC 7 cut(s) 21, 264, 394, 551, 648, 990, 1081
MseI TTAA 4 cut(s) 234, 276, 515, 914
MslI CAYNNNNRTG 2 cut(s) 744, 1118
MspA1I CMGCKG 1 cut(s) 629
MspI CCGG 4 cut(s) 164, 360, 698, 1008
MspR9I CCNGG 3 cut(s) 360, 361, 699
Mva1269I GAATGC 1 cut(s) 57
MwoI GCNNNNNNNGC 8 cut(s) 465, 632, 703, 720, 770, 887, 937, 1013
NciI CCSGG 3 cut(s) 360, 361, 699
NdeI CATATG 1 cut(s) 553
NdeII GATC 2 cut(s) 153, 654
NheI GCTAGC 1 cut(s) 622
NlaIII CATG 8 cut(s) 160, 459, 464, 619, 743, 890, 991, 1030
NlaIV GGNNCC 1 cut(s) 696
NmuCI GTSAC 3 cut(s) 476, 524, 778
NspI RCATGY 3 cut(s) 459, 619, 890
PaeI GCATGC 2 cut(s) 459, 890
PaeR7I CTCGAG 1 cut(s) 43
PagI TCATGA 1 cut(s) 156
PceI AGGCCT 1 cut(s) 188
PctI GAATGC 1 cut(s) 57
PfeI GAWTC 2 cut(s) 569, 839
PkrI GCNGC 7 cut(s) 202, 470, 621, 628, 857, 1025, 1186
PleI GAGTC 1 cut(s) 1030
PpsI GAGTC 1 cut(s) 1030
PspFI CCCAGC 4 cut(s) 73, 195, 650, 940
PspN4I GGNNCC 1 cut(s) 696
PspPI GGNCC 1 cut(s) 198
PspXI VCTCGAGB 1 cut(s) 43
RsaI GTAC 4 cut(s) 287, 347, 680, 793
RsaNI GTAC 4 cut(s) 286, 346, 679, 792
RseI CAYNNNNRTG 2 cut(s) 744, 1118
SalI GTCGAC 1 cut(s) 1163
SaqAI TTAA 4 cut(s) 234, 276, 515, 914
SatI GCNGC 7 cut(s) 201, 469, 620, 627, 856, 1024, 1185
Sau3AI GATC 2 cut(s) 153, 654
Sau96I GGNCC 1 cut(s) 198
ScaI AGTACT 1 cut(s) 680
SchI GAGTC 1 cut(s) 1030
ScrFI CCNGG 3 cut(s) 360, 361, 699
SduI GDGCHC 5 cut(s) 177, 366, 637, 949, 1068
SfaNI GCATC 1 cut(s) 229
SfcI CTRYAG 1 cut(s) 351
Sfr274I CTCGAG 1 cut(s) 43
SlaI CTCGAG 1 cut(s) 43
SmaI CCCGGG 1 cut(s) 361
SmiMI CAYNNNNRTG 2 cut(s) 744, 1118
SmlI CTYRAG 3 cut(s) 43, 320, 1038
SmoI CTYRAG 3 cut(s) 43, 320, 1038
SphI GCATGC 2 cut(s) 459, 890
Sse9I AATT 3 cut(s) 492, 752, 827
SseBI AGGCCT 1 cut(s) 188
SsiI CCGC 8 cut(s) 201, 620, 627, 692, 856, 1023, 1079, 1153
SspMI CTAG 6 cut(s) 204, 623, 734, 801, 962, 968
StuI AGGCCT 1 cut(s) 188
StyD4I CCNGG 3 cut(s) 358, 359, 697
StyI CCWWGG 1 cut(s) 724
TaaI ACNGT 3 cut(s) 290, 547, 784
TaiI ACGT 3 cut(s) 270, 975, 1170
TaqI TCGA 4 cut(s) 44, 509, 572, 1164
TasI AATT 3 cut(s) 492, 752, 827
TatI WGTACW 3 cut(s) 285, 678, 791
TauI GCSGC 5 cut(s) 203, 622, 629, 858, 1026
TfiI GAWTC 2 cut(s) 569, 839
Tru1I TTAA 4 cut(s) 234, 276, 515, 914
Tru9I TTAA 4 cut(s) 234, 276, 515, 914
TscAI CASTG 2 cut(s) 126, 310
TseFI GTSAC 3 cut(s) 476, 524, 778
TseI GCWGC 2 cut(s) 468, 1184
Tsp45I GTSAC 3 cut(s) 476, 524, 778
TspDTI ATGAA 5 cut(s) 80, 276, 342, 828, 1043
TspMI CCCGGG 1 cut(s) 359
TspRI CASTG 2 cut(s) 126, 310
XapI RAATTY 2 cut(s) 492, 752
XceI RCATGY 3 cut(s) 459, 619, 890
XhoI CTCGAG 1 cut(s) 43
XmaI CCCGGG 1 cut(s) 359
XmiI GTMKAC 1 cut(s) 1164
XspI CTAG 6 cut(s) 204, 623, 734, 801, 962, 968
ZraI GACGTC 2 cut(s) 973, 1168
ZrmI AGTACT 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.