Rorug02G0168000

Alcohol dehydrogenase GroES-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000167
Physical Location & Seq
Forward (+)
15083080 .. 15086200
3121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0168000.1

Sequence Viewer

Length: 1710 bp
ATGGTTATAGTAGGGGAGTTTGTAGGGGGTGCTGTTCTTGGAGCAGCATTTGGGGTGTTGTTTGATGTTGTCAAGAAAGCAGTTGACAAGCCTACTGCCTTTAAATCCCTCCTTGAGAATATCAAGTTTTCTCTGGAGTTTCTAAAGCCGGTGATTGAAAAGATAGGAGAGCATAACGTGGAATTGGGTCTCCCAGATGAAGAAATAAAGCATCTTATAACAGAAATGGAGGAGGGCGTAAAGCTTGTCCAGAAGTCATCAAAAGTCAGTAAGTGGAACTGCATGAAGTCTTATTACACGGATCAACTTATTGAATTGGATGGTGCTCTTAAAAGACTGTTCCATATATTGATGGTACAAGGAGTAAGGGATGCGAAGGAGACCTTGATTTTGGCAAGAAAACACCAAGACCAACTTATTGAAACGGCAAAAGATGCAAAGGAGACACTTGTTTTGGCACAAAAGAACACTAGCCAGCTTACTGAATCGGTAAAGGATGGGAAGGAGACCATAGAATTGGCAAGAAAAAACGCTGACCAATCAGCAAAAGATGGGAAGGAGACCTTGGTTTTGGCTAGGAAAACTAGAAGGTTGCTTAAGCGAATTGAACGACTGGTGACTTGCACTTCCAAATTGAAATTTAAACCCGCGACCTCCACGGTGTTAGTTACGCCAATTAACAAACTGGTCACGGCTCACAATGGGAACAAAATTCCCAAAGCGAGCAGAAGAGCAGGGAGAAGTCGAGTTCTGGAGGCATCCAACTTAATAGTCTACCGTTTTGCCGAGTTGGTCAATGCTACTGAGACTTTCAAGTTTAGGATGGGTGCGAGGACTTTCAAGGGTTGGGTGGATGAGAATACGCTTGCACCTTCTAAGGTTGGCACTGGAATGGCCGTTGCTGTCAAGATGTTGAACCCAAAAAATGTCGAAGACTTTAAGCAGTGGCAGCTCTCAGACTTCCTCGGAAGGCTTTCTCACCCCAACATTGTCAAGCCATTGGGATACTGTCGTAAGAATAAGGAGTTGCTCTTAGTTTATGAGTTCATGCCGAATGGAAGCTTATCTAATCATCTGTCTAGAAAGAACCCTGATGAGAAACCCCTATGTTGGGATAACAGACTCAGAATCGCTATTGGAGCTGCTCGGGTCTTGACTTTGTTGCACATGTTCCAAATCATACACAGAGATGTCAAACCCTCAAATATATTGCTTGATGAGGATTACAATACAAAAATCATGGATTTTTCCTGGTCAGAATGGGGGCCAGCTGATGGAAAGTTACATGTCTCAACACAGGTTTGTGGCACAATGGGTTATGTTGATCCACACTACGCGCAAACTGGTCATTTGTCTGTGAAGAGTGATGTGTATAGCTTCGGTGTTGTGCTGCTCGAGATTCTGACAGGGTTAAGGTCAATCGATCATAGCCGCCCTGAGGAACAAATCTATCTGCTTTCCTGGGCTACACCACTTCTCTGTGATGAAACAGAGTTGCAAACCATCATGGATGAGCAGATTAAGGACCAATATTCTTCCCAGCAAGCATTACAGACCGCGCAGCTTACTCTAAGATGTTTAGAAATGGATCCTGAGAGACGACCTTTCATGAAAGAAGTTGTGGAGGAATTAGAACACATTCGGGGATTGAAGGAAAAACCAAACCAGTCCGAGCTTAGCACCATGCAATCTTCTTCTAGTTCTCAATGA

Protein Analysis

569

Amino Acids

64.32

Weight (kDa)

8.85

Isoelectric Point (pI)

38.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 6 - 136 1.2e-27 Arabidopsis broad-spectrum mildew resistance protein RPW8
PK_Tyr_Ser-Thr PF07714 282 - 544 4.3e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 295 - 542 7.1e-36 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AccB7I CCANNNNNTGG 1 cut(s) 1274
AccI GTMKAC 1 cut(s) 774
AccII CGCG 3 cut(s) 650, 1337, 1559
AciI CCGC 3 cut(s) 648, 1432, 1557
AclWI GGATC 4 cut(s) 309, 1319, 1583, 1596
AcoI YGGCCR 1 cut(s) 894
AcsI RAATTY 2 cut(s) 638, 711
AfaI GTAC 1 cut(s) 357
AfiI CCNNNNNNNGG 4 cut(s) 1110, 1111, 1274, 1438
AflII CTTAAG 1 cut(s) 596
AflIII ACRYGT 2 cut(s) 1167, 1285
AgsI TTSAA 9 cut(s) 158, 314, 422, 608, 637, 814, 841, 916, 1651
AjnI CCWGG 2 cut(s) 1250, 1460
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
AluBI AGCT 9 cut(s) 244, 478, 952, 1062, 1142, 1271, 1377, 1564, 1675
AluI AGCT 9 cut(s) 244, 478, 952, 1062, 1142, 1271, 1377, 1564, 1675
Alw21I GWGCWC 1 cut(s) 328
Alw26I GTCTC 8 cut(s) 194, 374, 437, 500, 554, 800, 1294, 1591
AlwI GGATC 4 cut(s) 309, 1319, 1583, 1596
Ama87I CYCGRG 2 cut(s) 1146, 1394
AoxI GGCC 2 cut(s) 894, 1265
ApeKI GCWGC 5 cut(s) 44, 949, 1142, 1390, 1561
ApoI RAATTY 2 cut(s) 638, 711
ArsI GACNNNNNNTTYG 6 cut(s) 373, 405, 436, 468, 553, 585
Asp700I GAANNNNTTC 2 cut(s) 973, 1638
AspLEI GCGC 2 cut(s) 1339, 1561
AspS9I GGNCC 2 cut(s) 1265, 1525
AsuHPI GGTGA 3 cut(s) 163, 628, 971
AvaI CYCGRG 2 cut(s) 1146, 1394
AvaII GGWCC 1 cut(s) 1525
AxyI CCTNAGG 1 cut(s) 1437
BaeI ACNNNNGTAYC 2 cut(s) 997, 1030
BamHI GGATCC 1 cut(s) 1588
BarI GAAGNNNNNNTAC 2 cut(s) 278, 310
BbsI GAAGAC 1 cut(s) 939
Bbv12I GWGCWC 1 cut(s) 328
BbvI GCAGC 5 cut(s) 56, 961, 1129, 1377, 1573
BccI CCATC 7 cut(s) 314, 346, 491, 545, 817, 1268, 1511
BceAI ACGGC 3 cut(s) 441, 708, 881
BciT130I CCWGG 2 cut(s) 1252, 1462
BciVI GTATCC 1 cut(s) 998
BcoDI GTCTC 8 cut(s) 194, 374, 437, 500, 554, 800, 1294, 1591
BfaI CTAG 5 cut(s) 471, 576, 585, 1080, 1698
BfrI CTTAAG 1 cut(s) 596
BfuI GTATCC 1 cut(s) 998
BisI GCNGC 6 cut(s) 45, 950, 1143, 1391, 1432, 1562
BlpI GCTNAGC 1 cut(s) 1676
BlsI GCNGC 6 cut(s) 46, 951, 1144, 1392, 1433, 1563
Bme1390I CCNGG 2 cut(s) 1252, 1462
Bme18I GGWCC 1 cut(s) 1525
BmeT110I CYCGRG 2 cut(s) 1146, 1394
BmgT120I GGNCC 2 cut(s) 1265, 1525
BmiI GGNNCC 2 cut(s) 1266, 1590
BmrFI CCNGG 2 cut(s) 1252, 1462
BmsI GCATC 4 cut(s) 220, 361, 424, 767
BpiI GAAGAC 1 cut(s) 939
BpmI CTGGAG 2 cut(s) 155, 773
Bpu1102I GCTNAGC 1 cut(s) 1676
BpuEI CTTGAG 1 cut(s) 134
Bsa29I ATCGAT 1 cut(s) 1422
BsaI GGTCTC 4 cut(s) 194, 374, 500, 554
BsaJI CCNNGG 4 cut(s) 564, 657, 964, 1461
Bsc4I CCNNNNNNNGG 4 cut(s) 1110, 1111, 1274, 1438
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 5 cut(s) 618, 690, 892, 1348, 1666
Bse21I CCTNAGG 1 cut(s) 1437
BseBI CCWGG 2 cut(s) 1252, 1462
BseCI ATCGAT 1 cut(s) 1422
BseDI CCNNGG 4 cut(s) 564, 657, 964, 1461
BseGI GGATG 7 cut(s) 325, 376, 502, 758, 828, 859, 1516
BseLI CCNNNNNNNGG 4 cut(s) 1110, 1111, 1274, 1438
BseMII CTCAG 5 cut(s) 795, 969, 1138, 1428, 1584
BseNI ACTGG 5 cut(s) 618, 690, 892, 1348, 1666
BseRI GAGGAG 1 cut(s) 245
BseXI GCAGC 5 cut(s) 56, 961, 1129, 1377, 1573
BseYI CCCAGC 1 cut(s) 1539
Bsh1236I CGCG 3 cut(s) 650, 1337, 1559
BshFI GGCC 2 cut(s) 896, 1267
BshVI ATCGAT 1 cut(s) 1422
BsiHKAI GWGCWC 1 cut(s) 328
BsiHKCI CYCGRG 2 cut(s) 1146, 1394
BsiSI CCGG 1 cut(s) 149
BslI CCNNNNNNNGG 4 cut(s) 1110, 1111, 1274, 1438
BsmAI GTCTC 8 cut(s) 194, 374, 437, 500, 554, 800, 1294, 1591
BsmBI CGTCTC 1 cut(s) 1591
BsnI GGCC 2 cut(s) 896, 1267
Bso31I GGTCTC 4 cut(s) 194, 374, 500, 554
BsoBI CYCGRG 2 cut(s) 1146, 1394
Bsp1286I GDGCHC 1 cut(s) 328
Bsp143I GATC 4 cut(s) 301, 1324, 1423, 1588
Bsp1720I GCTNAGC 1 cut(s) 1676
BspACI CCGC 3 cut(s) 648, 1432, 1557
BspANI GGCC 2 cut(s) 896, 1267
BspCNI CTCAG 5 cut(s) 796, 968, 1137, 1429, 1585
BspDI ATCGAT 1 cut(s) 1422
BspFNI CGCG 3 cut(s) 650, 1337, 1559
BspHI TCATGA 1 cut(s) 1608
BspLI GGNNCC 2 cut(s) 1266, 1590
BspPI GGATC 4 cut(s) 309, 1319, 1583, 1596
BspQI GCTCTTC 1 cut(s) 724
BspTI CTTAAG 1 cut(s) 596
BspTNI GGTCTC 4 cut(s) 194, 374, 500, 554
BsrFI RCCGGY 1 cut(s) 148
BsrI ACTGG 5 cut(s) 618, 690, 892, 1348, 1666
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 4 cut(s) 564, 657, 964, 1461
BssMI GATC 4 cut(s) 301, 1324, 1423, 1588
BssT1I CCWWGG 1 cut(s) 564
Bst2UI CCWGG 2 cut(s) 1252, 1462
Bst4CI ACNGT 4 cut(s) 339, 661, 779, 1010
Bst6I CTCTTC 2 cut(s) 724, 1355
BstAFI CTTAAG 1 cut(s) 596
BstAPI GCANNNNNTGC 1 cut(s) 434
BstC8I GCNNGC 5 cut(s) 476, 724, 867, 1269, 1545
BstDEI CTNAG 9 cut(s) 804, 876, 955, 1033, 1124, 1437, 1571, 1593, 1676
BstDSI CCRYGG 1 cut(s) 657
BstF5I GGATG 7 cut(s) 325, 376, 502, 758, 828, 859, 1516
BstFNI CGCG 3 cut(s) 650, 1337, 1559
BstHHI GCGC 2 cut(s) 1339, 1561
BstKTI GATC 4 cut(s) 304, 1327, 1426, 1591
BstMAI GTCTC 8 cut(s) 194, 374, 437, 500, 554, 800, 1294, 1591
BstMBI GATC 4 cut(s) 301, 1324, 1423, 1588
BstMWI GCNNNNNNNGC 3 cut(s) 434, 949, 1139
BstNI CCWGG 2 cut(s) 1252, 1462
BstNSI RCATGY 2 cut(s) 1171, 1289
BstSCI CCNGG 2 cut(s) 1250, 1460
BstUI CGCG 3 cut(s) 650, 1337, 1559
BstV1I GCAGC 5 cut(s) 56, 961, 1129, 1377, 1573
BstV2I GAAGAC 1 cut(s) 939
BstX2I RGATCY 1 cut(s) 1588
BstXI CCANNNNNNTGG 1 cut(s) 517
BstYI RGATCY 1 cut(s) 1588
Bsu15I ATCGAT 1 cut(s) 1422
Bsu36I CCTNAGG 1 cut(s) 1437
BsuI GTATCC 1 cut(s) 998
BsuRI GGCC 2 cut(s) 896, 1267
BsuTUI ATCGAT 1 cut(s) 1422
BtgI CCRYGG 1 cut(s) 657
BtsCI GGATG 7 cut(s) 325, 376, 502, 758, 828, 859, 1516
BtsI GCAGTG 1 cut(s) 950
BtsIMutI CAGTG 2 cut(s) 885, 950
Cac8I GCNNGC 5 cut(s) 476, 724, 867, 1269, 1545
CciI TCATGA 1 cut(s) 1608
CfoI GCGC 2 cut(s) 1339, 1561
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 2 cut(s) 1265, 1525
ClaI ATCGAT 1 cut(s) 1422
Csp6I GTAC 1 cut(s) 356
CviAII CATG 8 cut(s) 283, 1048, 1168, 1240, 1286, 1507, 1609, 1684
CviQI GTAC 1 cut(s) 356
DdeI CTNAG 9 cut(s) 804, 876, 955, 1033, 1124, 1437, 1571, 1593, 1676
DpnI GATC 4 cut(s) 303, 1326, 1425, 1590
DpnII GATC 4 cut(s) 301, 1324, 1423, 1588
DraI TTTAAA 2 cut(s) 103, 643
EaeI YGGCCR 1 cut(s) 894
Eam1104I CTCTTC 2 cut(s) 724, 1355
EarI CTCTTC 2 cut(s) 724, 1355
Eco130I CCWWGG 1 cut(s) 564
Eco31I GGTCTC 4 cut(s) 194, 374, 500, 554
Eco47I GGWCC 1 cut(s) 1525
Eco81I CCTNAGG 1 cut(s) 1437
Eco88I CYCGRG 2 cut(s) 1146, 1394
EcoRII CCWGG 2 cut(s) 1250, 1460
EcoT14I CCWWGG 1 cut(s) 564
ErhI CCWWGG 1 cut(s) 564
Esp3I CGTCTC 1 cut(s) 1591
FaeI CATG 8 cut(s) 286, 1051, 1171, 1243, 1289, 1510, 1612, 1687
FalI AAGNNNNNCTT 6 cut(s) 368, 400, 399, 431, 548, 580
FatI CATG 8 cut(s) 282, 1047, 1167, 1239, 1285, 1506, 1608, 1683
FauI CCCGC 1 cut(s) 655
FblI GTMKAC 1 cut(s) 774
Fnu4HI GCNGC 6 cut(s) 45, 950, 1143, 1391, 1432, 1562
FokI GGATG 7 cut(s) 332, 383, 509, 745, 835, 866, 1523
Fsp4HI GCNGC 6 cut(s) 45, 950, 1143, 1391, 1432, 1562
FspBI CTAG 5 cut(s) 471, 576, 585, 1080, 1698
GlaI GCGC 2 cut(s) 1338, 1560
GluI GCNGC 6 cut(s) 45, 950, 1143, 1391, 1432, 1562
GsaI CCCAGC 1 cut(s) 1543
GsuI CTGGAG 2 cut(s) 155, 773
HaeIII GGCC 2 cut(s) 896, 1267
HapII CCGG 1 cut(s) 149
HhaI GCGC 2 cut(s) 1339, 1561
Hin1II CATG 8 cut(s) 286, 1051, 1171, 1243, 1289, 1510, 1612, 1687
Hin6I GCGC 2 cut(s) 1337, 1559
HinP1I GCGC 2 cut(s) 1337, 1559
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HindIII AAGCTT 2 cut(s) 242, 1060
HinfI GANTC 4 cut(s) 485, 1122, 1128, 1399
HpaII CCGG 1 cut(s) 149
HphI GGTGA 3 cut(s) 163, 628, 971
Hpy166II GTNNAC 2 cut(s) 85, 775
Hpy188I TCNGA 6 cut(s) 958, 968, 1127, 1258, 1404, 1672
Hpy8I GTNNAC 2 cut(s) 85, 775
HpyAV CCTTC 7 cut(s) 370, 496, 550, 582, 882, 963, 1645
HpyCH4III ACNGT 4 cut(s) 339, 661, 779, 1010
HpyCH4IV ACGT 1 cut(s) 177
HpyCH4V TGCA 7 cut(s) 282, 437, 624, 869, 1165, 1498, 1687
HpyF10VI GCNNNNNNNGC 3 cut(s) 434, 949, 1139
HpyF3I CTNAG 9 cut(s) 804, 876, 955, 1033, 1124, 1437, 1571, 1593, 1676
HpySE526I ACGT 1 cut(s) 177
Hsp92II CATG 8 cut(s) 286, 1051, 1171, 1243, 1289, 1510, 1612, 1687
HspAI GCGC 2 cut(s) 1337, 1559
Kzo9I GATC 4 cut(s) 301, 1324, 1423, 1588
LguI GCTCTTC 1 cut(s) 724
LmnI GCTCC 2 cut(s) 41, 1139
Lsp1109I GCAGC 5 cut(s) 56, 961, 1129, 1377, 1573
LweI GCATC 4 cut(s) 220, 361, 424, 767
MaeI CTAG 5 cut(s) 471, 576, 585, 1080, 1698
MaeII ACGT 1 cut(s) 177
MaeIII GTNAC 4 cut(s) 616, 667, 688, 1281
MalI GATC 4 cut(s) 303, 1326, 1425, 1590
MboI GATC 4 cut(s) 301, 1324, 1423, 1588
MboII GAAGA 7 cut(s) 212, 741, 944, 1372, 1527, 1683, 1686
MflI RGATCY 1 cut(s) 1588
MhlI GDGCHC 1 cut(s) 328
MluCI AATT 9 cut(s) 182, 314, 515, 603, 632, 638, 675, 711, 1628
MlyI GAGTC 1 cut(s) 1116
MmeI TCCRAC 1 cut(s) 786
MroXI GAANNNNTTC 2 cut(s) 973, 1638
MseI TTAA 9 cut(s) 102, 330, 597, 642, 678, 767, 939, 1412, 1521
MslI CAYNNNNRTG 2 cut(s) 890, 1188
MspA1I CMGCKG 1 cut(s) 1271
MspCI CTTAAG 1 cut(s) 596
MspI CCGG 1 cut(s) 149
MspR9I CCNGG 2 cut(s) 1252, 1462
MvaI CCWGG 2 cut(s) 1252, 1462
MvnI CGCG 3 cut(s) 650, 1337, 1559
MwoI GCNNNNNNNGC 3 cut(s) 434, 949, 1139
NdeII GATC 4 cut(s) 301, 1324, 1423, 1588
NlaIII CATG 8 cut(s) 286, 1051, 1171, 1243, 1289, 1510, 1612, 1687
NlaIV GGNNCC 2 cut(s) 1266, 1590
NmeAIII GCCGAG 1 cut(s) 811
NmuCI GTSAC 2 cut(s) 616, 688
NspI RCATGY 2 cut(s) 1171, 1289
PaeR7I CTCGAG 1 cut(s) 1394
PagI TCATGA 1 cut(s) 1608
PciI ACATGT 2 cut(s) 1167, 1285
PciSI GCTCTTC 1 cut(s) 724
PdmI GAANNNNTTC 2 cut(s) 973, 1638
PfeI GAWTC 3 cut(s) 485, 1128, 1399
PflMI CCANNNNNTGG 1 cut(s) 1274
PkrI GCNGC 6 cut(s) 46, 951, 1144, 1392, 1433, 1563
PleI GAGTC 1 cut(s) 1116
PpsI GAGTC 1 cut(s) 1116
PscI ACATGT 2 cut(s) 1167, 1285
PsiI TTATAA 1 cut(s) 218
Psp6I CCWGG 2 cut(s) 1250, 1460
PspFI CCCAGC 1 cut(s) 1539
PspGI CCWGG 2 cut(s) 1250, 1460
PspN4I GGNNCC 2 cut(s) 1266, 1590
PspPI GGNCC 2 cut(s) 1265, 1525
PsuI RGATCY 1 cut(s) 1588
PvuII CAGCTG 1 cut(s) 1271
RsaI GTAC 1 cut(s) 357
RsaNI GTAC 1 cut(s) 356
RseI CAYNNNNRTG 2 cut(s) 890, 1188
SapI GCTCTTC 1 cut(s) 724
SaqAI TTAA 9 cut(s) 102, 330, 597, 642, 678, 767, 939, 1412, 1521
SatI GCNGC 6 cut(s) 45, 950, 1143, 1391, 1432, 1562
Sau3AI GATC 4 cut(s) 301, 1324, 1423, 1588
Sau96I GGNCC 2 cut(s) 1265, 1525
SchI GAGTC 1 cut(s) 1116
ScrFI CCNGG 2 cut(s) 1252, 1462
SduI GDGCHC 1 cut(s) 328
SfaNI GCATC 4 cut(s) 220, 361, 424, 767
Sfr274I CTCGAG 1 cut(s) 1394
SinI GGWCC 1 cut(s) 1525
SlaI CTCGAG 1 cut(s) 1394
SmiMI CAYNNNNRTG 2 cut(s) 890, 1188
SmlI CTYRAG 3 cut(s) 113, 596, 1394
SmoI CTYRAG 3 cut(s) 113, 596, 1394
Sse9I AATT 9 cut(s) 182, 314, 515, 603, 632, 638, 675, 711, 1628
SsiI CCGC 3 cut(s) 648, 1432, 1557
SspI AATATT 1 cut(s) 1532
SspMI CTAG 5 cut(s) 471, 576, 585, 1080, 1698
StyD4I CCNGG 2 cut(s) 1250, 1460
StyI CCWWGG 1 cut(s) 564
TaaI ACNGT 4 cut(s) 339, 661, 779, 1010
TaiI ACGT 1 cut(s) 180
TaqI TCGA 4 cut(s) 745, 930, 1395, 1422
TasI AATT 9 cut(s) 182, 314, 515, 603, 632, 638, 675, 711, 1628
TauI GCSGC 1 cut(s) 1434
TfiI GAWTC 3 cut(s) 485, 1128, 1399
Tru1I TTAA 9 cut(s) 102, 330, 597, 642, 678, 767, 939, 1412, 1521
Tru9I TTAA 9 cut(s) 102, 330, 597, 642, 678, 767, 939, 1412, 1521
TscAI CASTG 2 cut(s) 892, 950
TseFI GTSAC 2 cut(s) 616, 688
TseI GCWGC 5 cut(s) 44, 949, 1142, 1390, 1561
Tsp45I GTSAC 2 cut(s) 616, 688
TspDTI ATGAA 6 cut(s) 213, 299, 1036, 1500, 1597, 1625
TspGWI ACGGA 1 cut(s) 314
TspRI CASTG 2 cut(s) 892, 950
Van91I CCANNNNNTGG 1 cut(s) 1274
Vha464I CTTAAG 1 cut(s) 596
VpaK11BI GGWCC 1 cut(s) 1525
XapI RAATTY 2 cut(s) 638, 711
XbaI TCTAGA 1 cut(s) 1079
XceI RCATGY 2 cut(s) 1171, 1289
XhoI CTCGAG 1 cut(s) 1394
XmiI GTMKAC 1 cut(s) 774
XmnI GAANNNNTTC 2 cut(s) 973, 1638
XspI CTAG 5 cut(s) 471, 576, 585, 1080, 1698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.