pycom08g00750

cinnamyl alcohol dehydrogenase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
584005 .. 584941
937 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g00750.2

Sequence Viewer

Length: 588 bp
ATGCCAAACAAAAATGAATTTATTATGTATATATATATATATATATATATCGACCTGCCTGGTTCTTTTGCCTCCATATATGTTATATATATTGAGTTGTGCCAAGTGAGTTTCTGCATTCCAAGACCAAAGGCCAATCTGATCCTCATGGCTCAGACGACTCCAAATCACACACAGACAGTTTCTGGGTGGGCAGCTCACGATTCCTCGGGCAAGATTACTCCTTTCGTCTTCAAACGAAGAGAAAATGGGATCAACGATGTGACCATAAAGATCTTGTACTGTGGGATATGCCACACCGATCTCCACCATGCTAAGAATGACTGGGGCATAACCATGTATCCAGTAGTTCCCGGGCATGAGATTACAGGGCTGATCACTAAAGTTGGGAGCAACGTGAAGGAGTTCAAGGAAGGAGACAGAGTCGGGGTTGGGTGTTTGGCGGCGACATGTTTGGAGTGTGAGTTCTGCAAGTCCTCCCAAGAGAACTACTGCGACCAGCTCCAGTTTACCTACAATGGCATCTTCTGGGACGGCAGCATCACCTACGGTGGATACTCCAAAATGTTGGTCGCAGATCACAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

196

Amino Acids

22.0

Weight (kDa)

6.36

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 63
AciI CCGC 1 cut(s) 443
AclWI GGATC 2 cut(s) 136, 260
AcsI RAATTY 1 cut(s) 17
AfaI GTAC 1 cut(s) 281
AflIII ACRYGT 1 cut(s) 449
AgsI TTSAA 2 cut(s) 235, 409
AjnI CCWGG 1 cut(s) 58
AloI GAACNNNNNNTCC 2 cut(s) 449, 481
AluBI AGCT 2 cut(s) 197, 502
AluI AGCT 2 cut(s) 197, 502
Alw26I GTCTC 1 cut(s) 411
AlwI GGATC 2 cut(s) 136, 260
AlwNI CAGNNNCTG 1 cut(s) 185
Ama87I CYCGRG 2 cut(s) 208, 353
AoxI GGCC 1 cut(s) 132
ApeKI GCWGC 2 cut(s) 194, 537
ApoI RAATTY 1 cut(s) 17
ArsI GACNNNNNNTTYG 2 cut(s) 555, 587
Asp700I GAANNNNTTC 1 cut(s) 404
AsuC2I CCSGG 2 cut(s) 354, 355
AsuHPI GGTGA 1 cut(s) 535
AvaI CYCGRG 2 cut(s) 208, 353
BbsI GAAGAC 1 cut(s) 223
BbvI GCAGC 2 cut(s) 206, 549
BceAI ACGGC 1 cut(s) 550
BciT130I CCWGG 1 cut(s) 60
BciVI GTATCC 2 cut(s) 351, 548
BclI TGATCA 1 cut(s) 375
BcnI CCSGG 2 cut(s) 354, 355
BcoDI GTCTC 1 cut(s) 411
BfuAI ACCTGC 1 cut(s) 63
BfuI GTATCC 2 cut(s) 351, 548
BglII AGATCT 1 cut(s) 273
BisI GCNGC 3 cut(s) 195, 444, 538
BlsI GCNGC 3 cut(s) 196, 445, 539
Bme1390I CCNGG 3 cut(s) 60, 354, 355
BmeT110I CYCGRG 2 cut(s) 208, 353
BmrFI CCNGG 3 cut(s) 60, 354, 355
BmrI ACTGGG 1 cut(s) 334
BmsI GCATC 2 cut(s) 531, 549
BmuI ACTGGG 1 cut(s) 334
BpiI GAAGAC 1 cut(s) 223
BpmI CTGGAG 1 cut(s) 488
BpuMI CCSGG 2 cut(s) 354, 355
BsaJI CCNNGG 2 cut(s) 207, 353
BsaXI ACNNNNNCTCC 4 cut(s) 408, 438, 449, 479
Bse1I ACTGG 3 cut(s) 329, 344, 505
BseBI CCWGG 1 cut(s) 60
BseDI CCNNGG 2 cut(s) 207, 353
BseMII CTCAG 1 cut(s) 167
BseNI ACTGG 3 cut(s) 329, 344, 505
BseXI GCAGC 2 cut(s) 206, 549
BshFI GGCC 1 cut(s) 134
BsiHKCI CYCGRG 2 cut(s) 208, 353
BsiSI CCGG 1 cut(s) 354
BslFI GGGAC 1 cut(s) 545
BsmAI GTCTC 1 cut(s) 411
BsmFI GGGAC 1 cut(s) 545
BsmI GAATGC 1 cut(s) 117
BsnI GGCC 1 cut(s) 134
BsoBI CYCGRG 2 cut(s) 208, 353
Bsp143I GATC 6 cut(s) 141, 252, 273, 301, 375, 577
BspACI CCGC 1 cut(s) 443
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 1 cut(s) 166
BspMI ACCTGC 1 cut(s) 63
BspPI GGATC 2 cut(s) 136, 260
BsrI ACTGG 3 cut(s) 329, 344, 505
BssECI CCNNGG 2 cut(s) 207, 353
BssMI GATC 6 cut(s) 141, 252, 273, 301, 375, 577
Bst2UI CCWGG 1 cut(s) 60
Bst4CI ACNGT 3 cut(s) 181, 284, 551
Bst6I CTCTTC 1 cut(s) 235
BstDEI CTNAG 2 cut(s) 153, 315
BstKTI GATC 6 cut(s) 144, 255, 276, 304, 378, 580
BstMAI GTCTC 1 cut(s) 411
BstMBI GATC 6 cut(s) 141, 252, 273, 301, 375, 577
BstNI CCWGG 1 cut(s) 60
BstNSI RCATGY 1 cut(s) 453
BstSCI CCNGG 3 cut(s) 58, 352, 353
BstV1I GCAGC 2 cut(s) 206, 549
BstV2I GAAGAC 1 cut(s) 223
BstX2I RGATCY 1 cut(s) 273
BstXI CCANNNNNNTGG 1 cut(s) 568
BstYI RGATCY 1 cut(s) 273
BsuI GTATCC 2 cut(s) 351, 548
BsuRI GGCC 1 cut(s) 134
BveI ACCTGC 1 cut(s) 63
CaiI CAGNNNCTG 1 cut(s) 185
Cfr9I CCCGGG 1 cut(s) 353
Csp6I GTAC 1 cut(s) 280
CviAII CATG 5 cut(s) 148, 311, 337, 359, 450
CviJI RGCY 5 cut(s) 134, 152, 197, 373, 502
CviKI_1 RGCY 5 cut(s) 134, 152, 197, 373, 502
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 2 cut(s) 153, 315
DpnI GATC 6 cut(s) 143, 254, 275, 303, 377, 579
DpnII GATC 6 cut(s) 141, 252, 273, 301, 375, 577
Eam1104I CTCTTC 1 cut(s) 235
EarI CTCTTC 1 cut(s) 235
Eco88I CYCGRG 2 cut(s) 208, 353
EcoRII CCWGG 1 cut(s) 58
FaeI CATG 5 cut(s) 151, 314, 340, 362, 453
FaqI GGGAC 1 cut(s) 545
FatI CATG 5 cut(s) 147, 310, 336, 358, 449
FbaI TGATCA 1 cut(s) 375
Fnu4HI GCNGC 3 cut(s) 195, 444, 538
Fsp4HI GCNGC 3 cut(s) 195, 444, 538
GluI GCNGC 3 cut(s) 195, 444, 538
GsuI CTGGAG 1 cut(s) 488
HaeIII GGCC 1 cut(s) 134
HapII CCGG 1 cut(s) 354
Hin1II CATG 5 cut(s) 151, 314, 340, 362, 453
HinfI GANTC 3 cut(s) 160, 203, 423
HpaII CCGG 1 cut(s) 354
HphI GGTGA 1 cut(s) 535
Hpy166II GTNNAC 1 cut(s) 510
Hpy188I TCNGA 2 cut(s) 141, 156
Hpy188III TCNNGA 1 cut(s) 200
Hpy8I GTNNAC 1 cut(s) 510
HpyAV CCTTC 2 cut(s) 394, 407
HpyCH4III ACNGT 3 cut(s) 181, 284, 551
HpyCH4IV ACGT 1 cut(s) 396
HpyCH4V TGCA 2 cut(s) 117, 471
HpyF3I CTNAG 2 cut(s) 153, 315
HpySE526I ACGT 1 cut(s) 396
Hsp92II CATG 5 cut(s) 151, 314, 340, 362, 453
Ksp22I TGATCA 1 cut(s) 375
Kzo9I GATC 6 cut(s) 141, 252, 273, 301, 375, 577
LmnI GCTCC 2 cut(s) 390, 507
Lsp1109I GCAGC 2 cut(s) 206, 549
LweI GCATC 2 cut(s) 531, 549
MaeII ACGT 1 cut(s) 396
MaeIII GTNAC 1 cut(s) 262
MalI GATC 6 cut(s) 143, 254, 275, 303, 377, 579
MboI GATC 6 cut(s) 141, 252, 273, 301, 375, 577
MboII GAAGA 3 cut(s) 223, 252, 517
MflI RGATCY 1 cut(s) 273
MluCI AATT 1 cut(s) 17
MlyI GAGTC 2 cut(s) 154, 432
MnlI CCTC 4 cut(s) 82, 155, 217, 487
MroXI GAANNNNTTC 1 cut(s) 404
MslI CAYNNNNRTG 1 cut(s) 335
MspI CCGG 1 cut(s) 354
MspR9I CCNGG 3 cut(s) 60, 354, 355
Mva1269I GAATGC 1 cut(s) 117
MvaI CCWGG 1 cut(s) 60
NciI CCSGG 2 cut(s) 354, 355
NdeII GATC 6 cut(s) 141, 252, 273, 301, 375, 577
NlaIII CATG 5 cut(s) 151, 314, 340, 362, 453
NmuCI GTSAC 1 cut(s) 262
NspI RCATGY 1 cut(s) 453
PciI ACATGT 1 cut(s) 449
PctI GAATGC 1 cut(s) 117
PdmI GAANNNNTTC 1 cut(s) 404
PfeI GAWTC 1 cut(s) 203
PflFI GACNNNGTC 1 cut(s) 422
PkrI GCNGC 3 cut(s) 196, 445, 539
PleI GAGTC 2 cut(s) 154, 431
PpsI GAGTC 2 cut(s) 154, 431
PscI ACATGT 1 cut(s) 449
Psp6I CCWGG 1 cut(s) 58
PspGI CCWGG 1 cut(s) 58
PstNI CAGNNNCTG 1 cut(s) 185
PsuI RGATCY 1 cut(s) 273
PsyI GACNNNGTC 1 cut(s) 422
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
RseI CAYNNNNRTG 1 cut(s) 335
SatI GCNGC 3 cut(s) 195, 444, 538
Sau3AI GATC 6 cut(s) 141, 252, 273, 301, 375, 577
SchI GAGTC 2 cut(s) 154, 432
ScrFI CCNGG 3 cut(s) 60, 354, 355
SetI ASST 7 cut(s) 57, 199, 399, 504, 515, 548, 587
SfaNI GCATC 2 cut(s) 531, 549
SmaI CCCGGG 1 cut(s) 355
SmiMI CAYNNNNRTG 1 cut(s) 335
Sse9I AATT 1 cut(s) 17
SsiI CCGC 1 cut(s) 443
StyD4I CCNGG 3 cut(s) 58, 352, 353
TaaI ACNGT 3 cut(s) 181, 284, 551
TaiI ACGT 1 cut(s) 399
TaqI TCGA 1 cut(s) 51
TasI AATT 1 cut(s) 17
TatI WGTACW 1 cut(s) 279
TauI GCSGC 1 cut(s) 446
TfiI GAWTC 1 cut(s) 203
TseFI GTSAC 1 cut(s) 262
TseI GCWGC 2 cut(s) 194, 537
Tsp45I GTSAC 1 cut(s) 262
TspDTI ATGAA 1 cut(s) 30
TspMI CCCGGG 1 cut(s) 353
Tth111I GACNNNGTC 1 cut(s) 422
XapI RAATTY 1 cut(s) 17
XceI RCATGY 1 cut(s) 453
XmaI CCCGGG 1 cut(s) 353
XmnI GAANNNNTTC 1 cut(s) 404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.