AT4G37980

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000167
Physical Location & Seq
Forward (+)
17852441 .. 17854608
2168 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G37980.1

Sequence Viewer

Length: 1074 bp
ATGGGAAAGGTTCTTGAGAAGGAGGCGTTTGGATTGGCTGCGAAAGACGAATCGGGAATTCTTTCGCCTTTCAGTTTCTCTAGAAGGGCGACGGGTGAAAAGGATGTGAGGTTCAAAGTCTTGTTCTGTGGAATTTGCCACACTGATCTGAGTATGGCCAAAAACGAATGGGGGTTAACTACTTATCCTCTTGTCCCTGGGCATGAGATTGTGGGCGTGGTGACTGAAGTTGGAGCCAAAGTGAAAAAATTCAACGCTGGAGACAAAGTCGGAGTTGGCTATATGGCCGGCTCGTGCAGGTCATGTGACAGCTGCAATGATGGCGACGAGAACTACTGTCCAAAGATGATCTTAACGTCCGGAGCCAAAAACTTTGACGATACCATGACCCATGGTGGATACTCCGACCACATGGTGTGTGCTGAGGATTTCATCATCCGTATTCCTGACAATCTCCCATTAGACGGTGCCGCACCACTACTCTGCGCCGGGGTCACGGTCTACTCCCCCATGAAGTATCACGGGCTCGACAAGCCCGGTATGCACATCGGTGTGGTGGGACTAGGCGGTTTGGGCCATGTAGCAGTGAAATTTGCTAAGGCTATGGGTACTAAAGTTACGGTTATTAGTACTTCGGAGCGTAAGAGAGACGAGGCCGTTACTCGGCTTGGTGCGGATGCCTTCTTGGTGAGCCGTGACCCGAAACAAATGAAGGATGCAATGGGGACTATGGATGGTATCATTGATACCGTATCTGCGACCCATCCACTTCTTCCGCTGCTTGGTTTGCTTAAAAATAAGGGAAAACTTGTTATGGTTGGTGCACCAGCAGAACCGCTCGAGCTTCCTGTTTTTCCTCTCATCTTTGGGCGGAAGATGGTGGTGGGTAGTATGGTAGGAGGTATAAAGGAGACGCAAGAGATGGTGGATTTGGCTGGAAAACACAACATCACGGCGGATATTGAGCTCATCTCTGCGGATTATGTCAACACCGCCATGGAACGGCTTGCAAAGGCTGACGTTAAGTACCGATTTGTGATTGATGTTGCCAACACGATGAAGCCAACTCCTTAA

Protein Analysis

357

Amino Acids

38.25

Weight (kDa)

6.75

Isoelectric Point (pI)

28.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 32 - 150 1.8e-25 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 190 - 312 8.1e-24 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 288
AccB1I GGYRCC 1 cut(s) 467
AccBSI CCGCTC 1 cut(s) 838
AccI GTMKAC 1 cut(s) 501
AccIII TCCGGA 1 cut(s) 359
AciI CCGC 9 cut(s) 471, 567, 674, 776, 836, 871, 956, 977, 993
AcoI YGGCCR 2 cut(s) 156, 285
AcsI RAATTY 4 cut(s) 57, 132, 248, 590
AcuI CTGAAG 1 cut(s) 246
AdeI CACNNNGTG 1 cut(s) 415
AfaI GTAC 3 cut(s) 610, 631, 1028
AfiI CCNNNNNNNGG 4 cut(s) 464, 663, 782, 1002
AgsI TTSAA 2 cut(s) 115, 253
AjnI CCWGG 1 cut(s) 196
AleI CACNNNNGTG 1 cut(s) 549
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 3 cut(s) 312, 844, 967
AluI AGCT 3 cut(s) 312, 844, 967
Alw21I GWGCWC 2 cut(s) 826, 969
Alw26I GTCTC 3 cut(s) 255, 642, 905
Alw44I GTGCAC 1 cut(s) 822
Ama87I CYCGRG 1 cut(s) 839
Aor13HI TCCGGA 1 cut(s) 359
AoxI GGCC 4 cut(s) 156, 285, 574, 654
ApaLI GTGCAC 1 cut(s) 822
ApeKI GCWGC 3 cut(s) 38, 312, 778
ApoI RAATTY 4 cut(s) 57, 132, 248, 590
Asp700I GAANNNNTTC 2 cut(s) 61, 248
AspLEI GCGC 1 cut(s) 488
AspS9I GGNCC 1 cut(s) 574
AsuC2I CCSGG 2 cut(s) 490, 537
AsuHPI GGTGA 3 cut(s) 107, 232, 700
AvaI CYCGRG 1 cut(s) 839
BaeGI GKGCMC 1 cut(s) 826
BaeI ACNNNNGTAYC 2 cut(s) 600, 633
BalI TGGCCA 1 cut(s) 158
BanI GGYRCC 1 cut(s) 467
BanII GRGCYC 2 cut(s) 528, 969
BauI CACGAG 1 cut(s) 292
Bbv12I GWGCWC 2 cut(s) 826, 969
BbvCI CCTCAGC 1 cut(s) 423
BbvI GCAGC 3 cut(s) 25, 299, 765
BccI CCATC 5 cut(s) 314, 728, 771, 871, 916
BceAI ACGGC 4 cut(s) 641, 678, 969, 1019
BciT130I CCWGG 1 cut(s) 198
BciVI GTATCC 1 cut(s) 392
BcnI CCSGG 2 cut(s) 490, 537
BcoDI GTCTC 3 cut(s) 255, 642, 905
BfaI CTAG 2 cut(s) 81, 563
BfuAI ACCTGC 1 cut(s) 288
BfuI GTATCC 1 cut(s) 392
BisI GCNGC 4 cut(s) 39, 313, 471, 779
BlsI GCNGC 4 cut(s) 40, 314, 472, 780
BmcAI AGTACT 1 cut(s) 631
Bme1390I CCNGG 3 cut(s) 198, 490, 537
BmeT110I CYCGRG 1 cut(s) 839
BmgT120I GGNCC 1 cut(s) 574
BmiI GGNNCC 3 cut(s) 235, 364, 469
BmrFI CCNGG 3 cut(s) 198, 490, 537
BmsI GCATC 2 cut(s) 667, 706
BplI GAGNNNNNCTC 2 cut(s) 956, 988
BpmI CTGGAG 1 cut(s) 279
Bpu10I CCTNAGC 2 cut(s) 423, 597
BpuEI CTTGAG 1 cut(s) 35
BpuMI CCSGG 2 cut(s) 490, 537
BsaJI CCNNGG 5 cut(s) 196, 197, 391, 489, 996
BsaWI WCCGGW 1 cut(s) 359
BsaXI ACNNNNNCTCC 4 cut(s) 225, 252, 255, 282
Bsc4I CCNNNNNNNGG 4 cut(s) 464, 663, 782, 1002
Bse118I RCCGGY 1 cut(s) 287
Bse3DI GCAATG 2 cut(s) 322, 726
BseAI TCCGGA 1 cut(s) 359
BseBI CCWGG 1 cut(s) 198
BseDI CCNNGG 5 cut(s) 196, 197, 391, 489, 996
BseGI GGATG 6 cut(s) 109, 435, 682, 721, 739, 763
BseLI CCNNNNNNNGG 4 cut(s) 464, 663, 782, 1002
BseMI GCAATG 2 cut(s) 322, 726
BseMII CTCAG 2 cut(s) 140, 414
BseSI GKGCMC 1 cut(s) 826
BseXI GCAGC 3 cut(s) 25, 299, 765
BsgI GTGCAG 1 cut(s) 316
BshFI GGCC 4 cut(s) 158, 287, 576, 656
BshNI GGYRCC 1 cut(s) 467
BsiHKAI GWGCWC 2 cut(s) 826, 969
BsiHKCI CYCGRG 1 cut(s) 839
BsiSI CCGG 4 cut(s) 288, 360, 489, 537
BslFI GGGAC 3 cut(s) 179, 573, 739
BslI CCNNNNNNNGG 4 cut(s) 464, 663, 782, 1002
BsmAI GTCTC 3 cut(s) 255, 642, 905
BsmBI CGTCTC 2 cut(s) 642, 905
BsmFI GGGAC 3 cut(s) 179, 573, 739
BsnI GGCC 4 cut(s) 158, 287, 576, 656
BsoBI CYCGRG 1 cut(s) 839
Bsp1286I GDGCHC 3 cut(s) 528, 826, 969
Bsp13I TCCGGA 1 cut(s) 359
Bsp143I GATC 2 cut(s) 145, 348
Bsp19I CCATGG 2 cut(s) 391, 996
BspACI CCGC 9 cut(s) 471, 567, 674, 776, 836, 871, 956, 977, 993
BspANI GGCC 4 cut(s) 158, 287, 576, 656
BspCNI CTCAG 2 cut(s) 141, 415
BspEI TCCGGA 1 cut(s) 359
BspLI GGNNCC 3 cut(s) 235, 364, 469
BspMI ACCTGC 1 cut(s) 288
BspT107I GGYRCC 1 cut(s) 467
BsrBI CCGCTC 1 cut(s) 838
BsrDI GCAATG 2 cut(s) 322, 726
BsrFI RCCGGY 1 cut(s) 287
BssAI RCCGGY 1 cut(s) 287
BssECI CCNNGG 5 cut(s) 196, 197, 391, 489, 996
BssMI GATC 2 cut(s) 145, 348
BssSI CACGAG 1 cut(s) 292
BssT1I CCWWGG 2 cut(s) 391, 996
Bst2BI CACGAG 1 cut(s) 292
Bst2UI CCWGG 1 cut(s) 198
Bst4CI ACNGT 5 cut(s) 338, 467, 499, 622, 751
BstC8I GCNNGC 2 cut(s) 289, 1008
BstDEI CTNAG 3 cut(s) 149, 423, 597
BstDSI CCRYGG 2 cut(s) 391, 996
BstF5I GGATG 6 cut(s) 109, 435, 682, 721, 739, 763
BstHHI GCGC 1 cut(s) 488
BstKTI GATC 2 cut(s) 148, 351
BstMAI GTCTC 3 cut(s) 255, 642, 905
BstMBI GATC 2 cut(s) 145, 348
BstMWI GCNNNNNNNGC 5 cut(s) 321, 532, 541, 573, 787
BstNI CCWGG 1 cut(s) 198
BstSCI CCNGG 3 cut(s) 196, 488, 535
BstSLI GKGCMC 1 cut(s) 826
BstV1I GCAGC 3 cut(s) 25, 299, 765
BsuI GTATCC 1 cut(s) 392
BsuRI GGCC 4 cut(s) 158, 287, 576, 656
BtgI CCRYGG 2 cut(s) 391, 996
BtsCI GGATG 6 cut(s) 109, 435, 682, 721, 739, 763
BtsI GCAGTG 1 cut(s) 591
BtsIMutI CAGTG 2 cut(s) 141, 591
BveI ACCTGC 1 cut(s) 288
Cac8I GCNNGC 2 cut(s) 289, 1008
CfoI GCGC 1 cut(s) 488
Cfr10I RCCGGY 1 cut(s) 287
Cfr13I GGNCC 1 cut(s) 574
CseI GACGC 1 cut(s) 922
Csp6I GTAC 3 cut(s) 609, 630, 1027
CviAII CATG 8 cut(s) 203, 303, 385, 392, 412, 511, 578, 997
CviQI GTAC 3 cut(s) 609, 630, 1027
DdeI CTNAG 3 cut(s) 149, 423, 597
DpnI GATC 2 cut(s) 147, 350
DpnII GATC 2 cut(s) 145, 348
DraIII CACNNNGTG 1 cut(s) 415
EaeI YGGCCR 2 cut(s) 156, 285
EciI GGCGGA 2 cut(s) 886, 971
Ecl136II GAGCTC 1 cut(s) 967
Eco130I CCWWGG 2 cut(s) 391, 996
Eco24I GRGCYC 2 cut(s) 528, 969
Eco53kI GAGCTC 1 cut(s) 967
Eco57I CTGAAG 1 cut(s) 246
Eco88I CYCGRG 1 cut(s) 839
EcoICRI GAGCTC 1 cut(s) 967
EcoRI GAATTC 1 cut(s) 57
EcoRII CCWGG 1 cut(s) 196
EcoT14I CCWWGG 2 cut(s) 391, 996
EcoT38I GRGCYC 2 cut(s) 528, 969
ErhI CCWWGG 2 cut(s) 391, 996
Esp3I CGTCTC 2 cut(s) 642, 905
FaeI CATG 8 cut(s) 206, 306, 388, 395, 415, 514, 581, 1000
FalI AAGNNNNNCTT 2 cut(s) 335, 367
FaqI GGGAC 3 cut(s) 179, 573, 739
FatI CATG 8 cut(s) 202, 302, 384, 391, 411, 510, 577, 996
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 4 cut(s) 39, 313, 471, 779
FokI GGATG 6 cut(s) 116, 422, 689, 728, 746, 750
FriOI GRGCYC 2 cut(s) 528, 969
Fsp4HI GCNGC 4 cut(s) 39, 313, 471, 779
FspBI CTAG 2 cut(s) 81, 563
GlaI GCGC 1 cut(s) 487
GluI GCNGC 4 cut(s) 39, 313, 471, 779
GsuI CTGGAG 1 cut(s) 279
HaeIII GGCC 4 cut(s) 158, 287, 576, 656
HapII CCGG 4 cut(s) 288, 360, 489, 537
HgaI GACGC 1 cut(s) 922
HhaI GCGC 1 cut(s) 488
Hin1II CATG 8 cut(s) 206, 306, 388, 395, 415, 514, 581, 1000
Hin6I GCGC 1 cut(s) 486
HinP1I GCGC 1 cut(s) 486
HincII GTYRAC 2 cut(s) 177, 988
HindII GTYRAC 2 cut(s) 177, 988
HinfI GANTC 1 cut(s) 50
HpaI GTTAAC 1 cut(s) 177
HpaII CCGG 4 cut(s) 288, 360, 489, 537
HphI GGTGA 3 cut(s) 107, 232, 700
Hpy166II GTNNAC 4 cut(s) 177, 502, 824, 988
Hpy188I TCNGA 4 cut(s) 150, 272, 406, 637
Hpy188III TCNNGA 5 cut(s) 14, 54, 81, 360, 446
Hpy8I GTNNAC 4 cut(s) 177, 502, 824, 988
Hpy99I CGWCG 2 cut(s) 94, 329
HpyAV CCTTC 4 cut(s) 13, 78, 691, 706
HpyCH4III ACNGT 5 cut(s) 338, 467, 499, 622, 751
HpyCH4IV ACGT 2 cut(s) 356, 1020
HpyCH4V TGCA 6 cut(s) 297, 315, 544, 719, 824, 1010
HpyF10VI GCNNNNNNNGC 5 cut(s) 321, 532, 541, 573, 787
HpyF3I CTNAG 3 cut(s) 149, 423, 597
HpySE526I ACGT 2 cut(s) 356, 1020
Hsp92II CATG 8 cut(s) 206, 306, 388, 395, 415, 514, 581, 1000
HspAI GCGC 1 cut(s) 486
Kpn2I TCCGGA 1 cut(s) 359
KroI GCCGGC 1 cut(s) 287
KroNI GCCGGC 1 cut(s) 289
KspAI GTTAAC 1 cut(s) 177
Kzo9I GATC 2 cut(s) 145, 348
LmnI GCTCC 3 cut(s) 233, 362, 637
Lsp1109I GCAGC 3 cut(s) 25, 299, 765
LweI GCATC 2 cut(s) 667, 706
MaeI CTAG 2 cut(s) 81, 563
MaeII ACGT 2 cut(s) 356, 1020
MaeIII GTNAC 6 cut(s) 220, 305, 493, 616, 658, 695
MalI GATC 2 cut(s) 147, 350
MbiI CCGCTC 1 cut(s) 838
MboI GATC 2 cut(s) 145, 348
MboII GAAGA 2 cut(s) 764, 886
MhlI GDGCHC 3 cut(s) 528, 826, 969
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 4 cut(s) 57, 132, 248, 590
MluNI TGGCCA 1 cut(s) 158
MmeI TCCRAC 3 cut(s) 211, 250, 429
MnlI CCTC 7 cut(s) 16, 102, 198, 418, 646, 867, 893
Mox20I TGGCCA 1 cut(s) 158
MroI TCCGGA 1 cut(s) 359
MroNI GCCGGC 1 cut(s) 287
MroXI GAANNNNTTC 2 cut(s) 61, 248
MscI TGGCCA 1 cut(s) 158
MseI TTAA 5 cut(s) 176, 353, 792, 1023, 1072
MslI CAYNNNNRTG 3 cut(s) 549, 551, 995
Msp20I TGGCCA 1 cut(s) 158
MspA1I CMGCKG 2 cut(s) 312, 778
MspI CCGG 4 cut(s) 288, 360, 489, 537
MspR9I CCNGG 3 cut(s) 198, 490, 537
MvaI CCWGG 1 cut(s) 198
MwoI GCNNNNNNNGC 5 cut(s) 321, 532, 541, 573, 787
NaeI GCCGGC 1 cut(s) 289
NciI CCSGG 2 cut(s) 490, 537
NcoI CCATGG 2 cut(s) 391, 996
NdeII GATC 2 cut(s) 145, 348
NgoMIV GCCGGC 1 cut(s) 287
NlaIII CATG 8 cut(s) 206, 306, 388, 395, 415, 514, 581, 1000
NlaIV GGNNCC 3 cut(s) 235, 364, 469
NmeAIII GCCGAG 1 cut(s) 643
NmuCI GTSAC 4 cut(s) 220, 305, 493, 695
OliI CACNNNNGTG 1 cut(s) 549
PaeR7I CTCGAG 1 cut(s) 839
PasI CCCWGGG 1 cut(s) 197
PdiI GCCGGC 1 cut(s) 289
PdmI GAANNNNTTC 2 cut(s) 61, 248
PfeI GAWTC 1 cut(s) 50
PflFI GACNNNGTC 1 cut(s) 266
PkrI GCNGC 4 cut(s) 40, 314, 472, 780
Psp124BI GAGCTC 1 cut(s) 969
Psp6I CCWGG 1 cut(s) 196
PspGI CCWGG 1 cut(s) 196
PspN4I GGNNCC 3 cut(s) 235, 364, 469
PspPI GGNCC 1 cut(s) 574
PspXI VCTCGAGB 1 cut(s) 839
PsyI GACNNNGTC 1 cut(s) 266
PvuII CAGCTG 1 cut(s) 312
RsaI GTAC 3 cut(s) 610, 631, 1028
RsaNI GTAC 3 cut(s) 609, 630, 1027
RseI CAYNNNNRTG 3 cut(s) 549, 551, 995
SacI GAGCTC 1 cut(s) 969
SaqAI TTAA 5 cut(s) 176, 353, 792, 1023, 1072
SatI GCNGC 4 cut(s) 39, 313, 471, 779
Sau3AI GATC 2 cut(s) 145, 348
Sau96I GGNCC 1 cut(s) 574
ScaI AGTACT 1 cut(s) 631
ScrFI CCNGG 3 cut(s) 198, 490, 537
SduI GDGCHC 3 cut(s) 528, 826, 969
SetI ASST 9 cut(s) 12, 113, 302, 314, 359, 846, 904, 969, 1023
SfaNI GCATC 2 cut(s) 667, 706
Sfr274I CTCGAG 1 cut(s) 839
SlaI CTCGAG 1 cut(s) 839
SmiMI CAYNNNNRTG 3 cut(s) 549, 551, 995
SmlI CTYRAG 2 cut(s) 14, 839
SmoI CTYRAG 2 cut(s) 14, 839
Sse9I AATT 4 cut(s) 57, 132, 248, 590
SsiI CCGC 9 cut(s) 471, 567, 674, 776, 836, 871, 956, 977, 993
SspMI CTAG 2 cut(s) 81, 563
SstI GAGCTC 1 cut(s) 969
StyD4I CCNGG 3 cut(s) 196, 488, 535
StyI CCWWGG 2 cut(s) 391, 996
TaaI ACNGT 5 cut(s) 338, 467, 499, 622, 751
TaiI ACGT 2 cut(s) 359, 1023
TaqI TCGA 2 cut(s) 528, 840
TasI AATT 4 cut(s) 57, 132, 248, 590
TatI WGTACW 1 cut(s) 629
TauI GCSGC 1 cut(s) 473
TfiI GAWTC 1 cut(s) 50
Tru1I TTAA 5 cut(s) 176, 353, 792, 1023, 1072
Tru9I TTAA 5 cut(s) 176, 353, 792, 1023, 1072
TscAI CASTG 2 cut(s) 148, 591
TseFI GTSAC 4 cut(s) 220, 305, 493, 695
TseI GCWGC 3 cut(s) 38, 312, 778
Tsp45I GTSAC 4 cut(s) 220, 305, 493, 695
TspDTI ATGAA 4 cut(s) 421, 527, 725, 1073
TspGWI ACGGA 1 cut(s) 428
TspRI CASTG 2 cut(s) 148, 591
Tth111I GACNNNGTC 1 cut(s) 266
VneI GTGCAC 1 cut(s) 822
XapI RAATTY 4 cut(s) 57, 132, 248, 590
XbaI TCTAGA 1 cut(s) 80
XhoI CTCGAG 1 cut(s) 839
XmiI GTMKAC 1 cut(s) 501
XmnI GAANNNNTTC 2 cut(s) 61, 248
XspI CTAG 2 cut(s) 81, 563
ZrmI AGTACT 1 cut(s) 631
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.