RchiOBHm_Chr1g0314861

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000167
Physical Location & Seq
Reverse (-)
2143027 .. 2144513
1487 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54541

Sequence Viewer

Length: 1068 bp
ATGTCTAACCCCAGGAAGGCATTTGGATGGGCTGCAAGTGATTCATCTGGTGTTCTCTCTCCCTTCAGTTTCTCCAGAAGGGAATCCGGAGAGAGAGACGTGACATTCAAAGTGTTGTACTGTGGGATTTGCCATTCGGACCTTCACATGGCCAAGAATGAATGGGGCTTCTCTACCTATCCTCTGGTTCCCGGGCATGAGATTGTCGGTGAAGTGACGGAAGTAGGGAGCAATGTACAAAAATTCAAAGTTGGAGACAAAGTCGGTGTTGGAGGCGTAGTGGGAGCTTGCCGATCTTGTGATAGTTGTACCGACCATCTTGAGAGCTACTGCCCCAAACTAATACTCACGTACGGTGCCAAGTACTATGACGGAACCACCACCTATGGCGGTTACTCTGACATTATGGTTGCAGATGAACACTTCGTAGTCCGTATCCCGGACAACCTACCCCTTGATTGTGCTGCTCCTCTCCTATGTGCCGGAATCACAACCTACAGCCCGTTGAGGTATTTTGGACTTGACAAGCCTGGCATGCATGTGGGCGTGGTTGGCCTAGGTGGTTTAGGCCACGTCGCAGTGAAGTTTGCCAAGGCAATGGGAGTGAAGGTTACAGTGATCAGTACGTCCCCTAATAAGAAGGAGGAAGCAATTAAACACCTAGGAGCTGATTCGTTTTTGGTTAGTCATGACCAAGATCAAATGCAGGCTGCCATTGGTACCATGGATGGGATCATTGACACAGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGGTGTGTTGAAGTCTCATGGAAAGCTTGTTATGGTTGGTGCACCAGAAAAGCCTCTTGAGCTTCCGGTTTTTCCTTTACTCATGGGAAGGAAGATGGTAGCTGGTAGCGGCGGTGGAGGTATGAAGGAGACACAAGAGATGATCGATTTTGCAGCCAAGCACAACATAACAGCAGACATCGAGGTTATCCCAATTGACTACTTGAACACTGCCATGGAGCGCCTTGCCAAAGCAGACGTCAGATACCGTTTTGTTATTGACATTGGAAACACACTGAAGGCTAGCTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

355

Amino Acids

38.07

Weight (kDa)

6.31

Isoelectric Point (pI)

31.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 31 - 148 1.6e-26 Alcohol dehydrogenase GroES-like domain
AlaDh_PNT_C PF01262 180 - 250 6.3e-06 Alanine dehydrogenase/PNT, C-terminal domain
ADH_zinc_N PF00107 188 - 311 7.7e-23 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1017
Acc65I GGTACC 1 cut(s) 719
AccB1I GGYRCC 2 cut(s) 356, 719
AccIII TCCGGA 1 cut(s) 86
AciI CCGC 3 cut(s) 390, 885, 888
AclWI GGATC 1 cut(s) 740
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 1 cut(s) 242
AcuI CTGAAG 1 cut(s) 49
AcyI GRCGYC 1 cut(s) 1014
AfaI GTAC 7 cut(s) 119, 237, 310, 353, 365, 625, 721
AfiI CCNNNNNNNGG 5 cut(s) 16, 148, 439, 729, 776
AgsI TTSAA 4 cut(s) 109, 247, 787, 982
AjiI CACGTC 2 cut(s) 100, 574
AjnI CCWGG 2 cut(s) 11, 529
AluBI AGCT 7 cut(s) 287, 327, 668, 802, 838, 878, 1062
AluI AGCT 7 cut(s) 287, 327, 668, 802, 838, 878, 1062
Alw21I GWGCWC 1 cut(s) 820
Alw26I GTCTC 4 cut(s) 90, 249, 795, 899
Alw44I GTGCAC 1 cut(s) 816
AlwI GGATC 1 cut(s) 740
AlwNI CAGNNNCTG 1 cut(s) 749
Ama87I CYCGRG 1 cut(s) 191
Aor13HI TCCGGA 1 cut(s) 86
AoxI GGCC 3 cut(s) 150, 553, 568
ApaLI GTGCAC 1 cut(s) 816
ApeKI GCWGC 4 cut(s) 32, 464, 710, 929
ApoI RAATTY 1 cut(s) 242
ArsI GACNNNNNNTTYG 2 cut(s) 999, 1031
Asp718I GGTACC 1 cut(s) 719
AspA2I CCTAGG 2 cut(s) 556, 661
AspLEI GCGC 1 cut(s) 999
AspS9I GGNCC 1 cut(s) 139
AsuC2I CCSGG 3 cut(s) 192, 193, 440
AsuHPI GGTGA 1 cut(s) 221
AsuNHI GCTAGC 1 cut(s) 1058
AvaI CYCGRG 1 cut(s) 191
AvaII GGWCC 1 cut(s) 139
AvrII CCTAGG 2 cut(s) 556, 661
BaeGI GKGCMC 1 cut(s) 820
BalI TGGCCA 1 cut(s) 152
BanI GGYRCC 2 cut(s) 356, 719
Bbv12I GWGCWC 1 cut(s) 820
BbvI GCAGC 4 cut(s) 19, 451, 697, 941
BccI CCATC 4 cut(s) 21, 324, 722, 865
BciT130I CCWGG 2 cut(s) 13, 531
BciVI GTATCC 1 cut(s) 446
BclI TGATCA 1 cut(s) 618
BcnI CCSGG 3 cut(s) 192, 193, 440
BcoDI GTCTC 4 cut(s) 90, 249, 795, 899
BfaI CTAG 3 cut(s) 557, 662, 1059
BfmI CTRYAG 1 cut(s) 496
BfoI RGCGCY 1 cut(s) 1000
BfuI GTATCC 1 cut(s) 446
BisI GCNGC 5 cut(s) 33, 465, 711, 886, 930
BlnI CCTAGG 2 cut(s) 556, 661
BlsI GCNGC 5 cut(s) 34, 466, 712, 887, 931
BmcAI AGTACT 1 cut(s) 365
Bme1390I CCNGG 5 cut(s) 13, 192, 193, 440, 531
Bme18I GGWCC 1 cut(s) 139
BmeT110I CYCGRG 1 cut(s) 191
BmgBI CACGTC 2 cut(s) 100, 574
BmgT120I GGNCC 1 cut(s) 139
BmiI GGNNCC 4 cut(s) 189, 358, 376, 721
BmrFI CCNGG 5 cut(s) 13, 192, 193, 440, 531
BmtI GCTAGC 1 cut(s) 1062
BpmI CTGGAG 1 cut(s) 58
BpuEI CTTGAG 2 cut(s) 341, 854
BpuMI CCSGG 3 cut(s) 192, 193, 440
Bsa29I ATCGAT 1 cut(s) 921
BsaAI YACGTR 1 cut(s) 351
BsaHI GRCGYC 1 cut(s) 1014
BsaJI CCNNGG 7 cut(s) 11, 191, 556, 591, 661, 723, 990
BsaWI WCCGGW 2 cut(s) 86, 841
BsaXI ACNNNNNCTCC 6 cut(s) 246, 264, 276, 294, 594, 624
Bsc4I CCNNNNNNNGG 5 cut(s) 16, 148, 439, 729, 776
Bse3DI GCAATG 2 cut(s) 238, 603
BseAI TCCGGA 1 cut(s) 86
BseBI CCWGG 2 cut(s) 13, 531
BseCI ATCGAT 1 cut(s) 921
BseDI CCNNGG 7 cut(s) 11, 191, 556, 591, 661, 723, 990
BseGI GGATG 3 cut(s) 32, 733, 757
BseLI CCNNNNNNNGG 5 cut(s) 16, 148, 439, 729, 776
BseMI GCAATG 2 cut(s) 238, 603
BseRI GAGGAG 1 cut(s) 459
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 4 cut(s) 19, 451, 697, 941
BsgI GTGCAG 1 cut(s) 735
BshFI GGCC 3 cut(s) 152, 555, 570
BshNI GGYRCC 2 cut(s) 356, 719
BshVI ATCGAT 1 cut(s) 921
BsiHKAI GWGCWC 1 cut(s) 820
BsiHKCI CYCGRG 1 cut(s) 191
BsiSI CCGG 5 cut(s) 87, 192, 440, 483, 842
BsiWI CGTACG 1 cut(s) 351
BslFI GGGAC 1 cut(s) 613
BslI CCNNNNNNNGG 5 cut(s) 16, 148, 439, 729, 776
BsmAI GTCTC 4 cut(s) 90, 249, 795, 899
BsmBI CGTCTC 1 cut(s) 90
BsmFI GGGAC 1 cut(s) 613
BsnI GGCC 3 cut(s) 152, 555, 570
BsoBI CYCGRG 1 cut(s) 191
Bsp1286I GDGCHC 1 cut(s) 820
Bsp13I TCCGGA 1 cut(s) 86
Bsp1407I TGTACA 1 cut(s) 235
Bsp143I GATC 5 cut(s) 293, 618, 697, 732, 918
Bsp19I CCATGG 2 cut(s) 723, 990
BspACI CCGC 3 cut(s) 390, 885, 888
BspANI GGCC 3 cut(s) 152, 555, 570
BspDI ATCGAT 1 cut(s) 921
BspEI TCCGGA 1 cut(s) 86
BspHI TCATGA 1 cut(s) 688
BspLI GGNNCC 4 cut(s) 189, 358, 376, 721
BspOI GCTAGC 1 cut(s) 1062
BspPI GGATC 1 cut(s) 740
BspT107I GGYRCC 2 cut(s) 356, 719
BsrDI GCAATG 2 cut(s) 238, 603
BsrGI TGTACA 1 cut(s) 235
BssECI CCNNGG 7 cut(s) 11, 191, 556, 591, 661, 723, 990
BssMI GATC 5 cut(s) 293, 618, 697, 732, 918
BssNI GRCGYC 1 cut(s) 1014
BssT1I CCWWGG 5 cut(s) 556, 591, 661, 723, 990
Bst2UI CCWGG 2 cut(s) 13, 531
Bst4CI ACNGT 5 cut(s) 122, 356, 616, 745, 1025
BstACI GRCGYC 1 cut(s) 1014
BstAUI TGTACA 1 cut(s) 235
BstBAI YACGTR 1 cut(s) 351
BstC8I GCNNGC 4 cut(s) 289, 536, 708, 1060
BstDSI CCRYGG 2 cut(s) 723, 990
BstF5I GGATG 3 cut(s) 32, 733, 757
BstH2I RGCGCY 1 cut(s) 1000
BstHHI GCGC 1 cut(s) 999
BstKTI GATC 5 cut(s) 296, 621, 700, 735, 921
BstMAI GTCTC 4 cut(s) 90, 249, 795, 899
BstMBI GATC 5 cut(s) 293, 618, 697, 732, 918
BstMWI GCNNNNNNNGC 3 cut(s) 535, 552, 835
BstNI CCWGG 2 cut(s) 13, 531
BstNSI RCATGY 2 cut(s) 538, 542
BstSCI CCNGG 5 cut(s) 11, 190, 191, 438, 529
BstSFI CTRYAG 1 cut(s) 496
BstSLI GKGCMC 1 cut(s) 820
BstV1I GCAGC 4 cut(s) 19, 451, 697, 941
BstXI CCANNNNNNTGG 1 cut(s) 598
Bsu15I ATCGAT 1 cut(s) 921
BsuI GTATCC 1 cut(s) 446
BsuRI GGCC 3 cut(s) 152, 555, 570
BsuTUI ATCGAT 1 cut(s) 921
BtgI CCRYGG 2 cut(s) 723, 990
BtrI CACGTC 2 cut(s) 100, 574
BtsCI GGATG 3 cut(s) 32, 733, 757
BtsI GCAGTG 2 cut(s) 585, 984
BtsIMutI CAGTG 4 cut(s) 585, 621, 984, 1049
Cac8I GCNNGC 4 cut(s) 289, 536, 708, 1060
CaiI CAGNNNCTG 1 cut(s) 749
CciI TCATGA 1 cut(s) 688
CfoI GCGC 1 cut(s) 999
Cfr13I GGNCC 1 cut(s) 139
Cfr9I CCCGGG 1 cut(s) 191
ClaI ATCGAT 1 cut(s) 921
Csp6I GTAC 7 cut(s) 118, 236, 309, 352, 364, 624, 720
CviAII CATG 9 cut(s) 148, 197, 535, 539, 689, 724, 794, 859, 991
CviQI GTAC 7 cut(s) 118, 236, 309, 352, 364, 624, 720
DpnI GATC 5 cut(s) 295, 620, 699, 734, 920
DpnII GATC 5 cut(s) 293, 618, 697, 732, 918
EaeI YGGCCR 1 cut(s) 150
Eco130I CCWWGG 5 cut(s) 556, 591, 661, 723, 990
Eco47I GGWCC 1 cut(s) 139
Eco57I CTGAAG 1 cut(s) 49
Eco88I CYCGRG 1 cut(s) 191
EcoRII CCWGG 2 cut(s) 11, 529
EcoT14I CCWWGG 5 cut(s) 556, 591, 661, 723, 990
EcoT22I ATGCAT 1 cut(s) 540
ErhI CCWWGG 5 cut(s) 556, 591, 661, 723, 990
Esp3I CGTCTC 1 cut(s) 90
FaeI CATG 9 cut(s) 151, 200, 538, 542, 692, 727, 797, 862, 994
FaqI GGGAC 1 cut(s) 613
FatI CATG 9 cut(s) 147, 196, 534, 538, 688, 723, 793, 858, 990
FbaI TGATCA 1 cut(s) 618
Fnu4HI GCNGC 5 cut(s) 33, 465, 711, 886, 930
FokI GGATG 3 cut(s) 39, 740, 744
Fsp4HI GCNGC 5 cut(s) 33, 465, 711, 886, 930
FspBI CTAG 3 cut(s) 557, 662, 1059
GlaI GCGC 1 cut(s) 998
GluI GCNGC 5 cut(s) 33, 465, 711, 886, 930
GsuI CTGGAG 1 cut(s) 58
HaeII RGCGCY 1 cut(s) 1000
HaeIII GGCC 3 cut(s) 152, 555, 570
HapII CCGG 5 cut(s) 87, 192, 440, 483, 842
HhaI GCGC 1 cut(s) 999
Hin1I GRCGYC 1 cut(s) 1014
Hin1II CATG 9 cut(s) 151, 200, 538, 542, 692, 727, 797, 862, 994
Hin6I GCGC 1 cut(s) 997
HinP1I GCGC 1 cut(s) 997
HindIII AAGCTT 1 cut(s) 800
HinfI GANTC 4 cut(s) 41, 83, 486, 671
HpaII CCGG 5 cut(s) 87, 192, 440, 483, 842
HphI GGTGA 1 cut(s) 221
Hpy166II GTNNAC 1 cut(s) 818
Hpy188I TCNGA 3 cut(s) 139, 400, 1019
Hpy188III TCNNGA 5 cut(s) 75, 87, 320, 689, 833
Hpy8I GTNNAC 1 cut(s) 818
Hpy99I CGWCG 1 cut(s) 578
HpyAV CCTTC 9 cut(s) 10, 72, 73, 152, 601, 634, 858, 895, 1048
HpyCH4III ACNGT 5 cut(s) 122, 356, 616, 745, 1025
HpyCH4IV ACGT 5 cut(s) 99, 350, 573, 626, 1014
HpyCH4V TGCA 7 cut(s) 35, 413, 538, 706, 752, 818, 929
HpyF10VI GCNNNNNNNGC 3 cut(s) 535, 552, 835
HpySE526I ACGT 5 cut(s) 99, 350, 573, 626, 1014
Hsp92I GRCGYC 1 cut(s) 1014
Hsp92II CATG 9 cut(s) 151, 200, 538, 542, 692, 727, 797, 862, 994
HspAI GCGC 1 cut(s) 997
Kpn2I TCCGGA 1 cut(s) 86
KpnI GGTACC 1 cut(s) 723
Ksp22I TGATCA 1 cut(s) 618
Kzo9I GATC 5 cut(s) 293, 618, 697, 732, 918
LmnI GCTCC 5 cut(s) 228, 284, 472, 665, 994
Lsp1109I GCAGC 4 cut(s) 19, 451, 697, 941
MaeI CTAG 3 cut(s) 557, 662, 1059
MaeII ACGT 5 cut(s) 99, 350, 573, 626, 1014
MaeIII GTNAC 4 cut(s) 100, 214, 392, 610
MalI GATC 5 cut(s) 295, 620, 699, 734, 920
MboI GATC 5 cut(s) 293, 618, 697, 732, 918
MboII GAAGA 1 cut(s) 880
MfeI CAATTG 1 cut(s) 969
MhlI GDGCHC 1 cut(s) 820
MlsI TGGCCA 1 cut(s) 152
MluCI AATT 3 cut(s) 242, 651, 969
MluNI TGGCCA 1 cut(s) 152
MmeI TCCRAC 2 cut(s) 232, 250
MnlI CCTC 9 cut(s) 192, 266, 480, 501, 637, 771, 840, 887, 952
Mox20I TGGCCA 1 cut(s) 152
Mph1103I ATGCAT 1 cut(s) 540
MroI TCCGGA 1 cut(s) 86
MscI TGGCCA 1 cut(s) 152
MseI TTAA 2 cut(s) 654, 1066
MslI CAYNNNNRTG 3 cut(s) 25, 539, 989
Msp20I TGGCCA 1 cut(s) 152
MspI CCGG 5 cut(s) 87, 192, 440, 483, 842
MspR9I CCNGG 5 cut(s) 13, 192, 193, 440, 531
MunI CAATTG 1 cut(s) 969
MvaI CCWGG 2 cut(s) 13, 531
MwoI GCNNNNNNNGC 3 cut(s) 535, 552, 835
NciI CCSGG 3 cut(s) 192, 193, 440
NcoI CCATGG 2 cut(s) 723, 990
NdeII GATC 5 cut(s) 293, 618, 697, 732, 918
NheI GCTAGC 1 cut(s) 1058
NlaIII CATG 9 cut(s) 151, 200, 538, 542, 692, 727, 797, 862, 994
NlaIV GGNNCC 4 cut(s) 189, 358, 376, 721
NmuCI GTSAC 2 cut(s) 100, 214
NsiI ATGCAT 1 cut(s) 540
NspI RCATGY 2 cut(s) 538, 542
PaeI GCATGC 1 cut(s) 538
PagI TCATGA 1 cut(s) 688
PfeI GAWTC 4 cut(s) 41, 83, 486, 671
Pfl23II CGTACG 1 cut(s) 351
PflFI GACNNNGTC 1 cut(s) 260
PfoI TCCNGGA 1 cut(s) 438
PkrI GCNGC 5 cut(s) 34, 466, 712, 887, 931
Ppu21I YACGTR 1 cut(s) 351
Psp6I CCWGG 2 cut(s) 11, 529
PspGI CCWGG 2 cut(s) 11, 529
PspLI CGTACG 1 cut(s) 351
PspN4I GGNNCC 4 cut(s) 189, 358, 376, 721
PspPI GGNCC 1 cut(s) 139
PstNI CAGNNNCTG 1 cut(s) 749
PsyI GACNNNGTC 1 cut(s) 260
RsaI GTAC 7 cut(s) 119, 237, 310, 353, 365, 625, 721
RsaNI GTAC 7 cut(s) 118, 236, 309, 352, 364, 624, 720
RseI CAYNNNNRTG 3 cut(s) 25, 539, 989
SaqAI TTAA 2 cut(s) 654, 1066
SatI GCNGC 5 cut(s) 33, 465, 711, 886, 930
Sau3AI GATC 5 cut(s) 293, 618, 697, 732, 918
Sau96I GGNCC 1 cut(s) 139
ScaI AGTACT 1 cut(s) 365
ScrFI CCNGG 5 cut(s) 13, 192, 193, 440, 531
SduI GDGCHC 1 cut(s) 820
SfcI CTRYAG 1 cut(s) 496
SinI GGWCC 1 cut(s) 139
SmaI CCCGGG 1 cut(s) 193
SmiMI CAYNNNNRTG 3 cut(s) 25, 539, 989
SmlI CTYRAG 2 cut(s) 320, 833
SmoI CTYRAG 2 cut(s) 320, 833
SphI GCATGC 1 cut(s) 538
Sse9I AATT 3 cut(s) 242, 651, 969
SsiI CCGC 3 cut(s) 390, 885, 888
SspMI CTAG 3 cut(s) 557, 662, 1059
StyD4I CCNGG 5 cut(s) 11, 190, 191, 438, 529
StyI CCWWGG 5 cut(s) 556, 591, 661, 723, 990
TaaI ACNGT 5 cut(s) 122, 356, 616, 745, 1025
TaiI ACGT 5 cut(s) 102, 353, 576, 629, 1017
TaqI TCGA 2 cut(s) 921, 957
TasI AATT 3 cut(s) 242, 651, 969
TatI WGTACW 3 cut(s) 117, 235, 363
TauI GCSGC 1 cut(s) 888
TfiI GAWTC 4 cut(s) 41, 83, 486, 671
Tru1I TTAA 2 cut(s) 654, 1066
Tru9I TTAA 2 cut(s) 654, 1066
TscAI CASTG 4 cut(s) 585, 621, 991, 1056
TseFI GTSAC 2 cut(s) 100, 214
TseI GCWGC 4 cut(s) 32, 464, 710, 929
Tsp45I GTSAC 2 cut(s) 100, 214
TspDTI ATGAA 4 cut(s) 33, 174, 432, 914
TspGWI ACGGA 3 cut(s) 233, 387, 422
TspMI CCCGGG 1 cut(s) 191
TspRI CASTG 4 cut(s) 585, 621, 991, 1056
Tth111I GACNNNGTC 1 cut(s) 260
VneI GTGCAC 1 cut(s) 816
VpaK11BI GGWCC 1 cut(s) 139
XapI RAATTY 1 cut(s) 242
XceI RCATGY 2 cut(s) 538, 542
XcmI CCANNNNNNNNNTGG 1 cut(s) 721
XmaI CCCGGG 1 cut(s) 191
XmaJI CCTAGG 2 cut(s) 556, 661
XspI CTAG 3 cut(s) 557, 662, 1059
ZraI GACGTC 1 cut(s) 1015
ZrmI AGTACT 1 cut(s) 365
Zsp2I ATGCAT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.