Rroxscaffold_6G00404470

Alcohol dehydrogenase GroES-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000167
Physical Location & Seq
Forward (+)
26989067 .. 26992892
3826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00404470.1

Sequence Viewer

Length: 1425 bp
ATGACAATGGTTAACTCCAGGAAAAGAAAGCAAATGGAATCATCTCCGGAGCAAGAACACCCCAGGAAAGCAATTGGATGGGCTGCAAGAGATACATCTGGTGTTCTCTCTCCCTTCAAGTTCTCGAGAAGGGAAACAGGAGCGACGGACGTAAGATTCAAAGTGTTATATTGTGGAGTATGCCATTCGGACATTCACATGGCCAAAAATGATTGGGGTACTTCTACCTATCCGATAGTACCGGGGCATGAACTTGTTGGTGTAGTGACAGAAATAGGGTGCAAAGTCAAGAAATTTAAAGTTGGAGACAAGGTCGGTGTTGGTTGCATGGTGGACTCTGACCGAACTTGTGATAATTGTGTCCACCACCTAGAGAATTACTGTCCCCAGCTTATACAAACCTACAGTTCCAAGTACTATGATGGAACCATGACATACGGAGGTTACTCGAACAACATGGTGACTGATGAGCACTTCATTGTTCGTATCCCGGACAACTTACCTCTTGATGGCGTTGCTCCGCTTCTATGTGCCGGGATAACAACTTACAGCCCCTTGAGATATTATGGACTTGACAAACCTGGTATGCATCTTGGTGTGAATGGCCTAGGCGGTTTAGGTCACATGGCTGTGAAATTTGCCAAGGCTTTGGGGCTCAAGGTTACAGTGATTAGTACTTCCCCAAATAAGAAGAAGGCAGCTATGGAACATCTCCGCGCTGATGCATTTTTGCTCAGCACTGACCAAGATCAGATAGAGGCTGCCATGGGAACAATGGATGGTATCATCGACACGGTTCCTACAGTTCGACCTCTAGAGCCTTTGATTAATTTGTTGAAGACTAATGGAAAGGTTGTTACCGTTGGTATAGCGGTGCAACCACTGGATCTTCCAGTTTTCCCTTTGGTCCTTGGAAGGAAGATGGTAGCTGGTAGTGCCATTGGAGGTATGAAGGAGACGCAAGAGATGATTGATTTTGCTGCTGAACATAACATAACAGCTGACATTGAGGTTATCCCAATTGATTACCTGAACACCGCCATGCAACGCGTTGTCGAGAAAGATGTCAGGCCACACGGCGGTGAAGTTTGCCGAGACTTTGGGGTCAAGGTCACCTTGATTAGTACCTTCCCTAACAAGAAGGACGAAGCTGTCAACAACCTCGGTGTTGCTGATTCATTTTGGGTTTCATTGACTGCTCTTTACATGGCTGCCACATCTGTGATCTGTCCTTGGTCTTTCTTGGATGATGGGGCCTCGACAAAGAGATCATACGCATCTGTGGTTCGCCCGTCTTCCATTCCCACTGCCGATTTTCCTGCGTCGATTGTACAGGATGGGAAGACTTCTGTTATGATATCTGAGGAAGCCTATCATTCTGGGCTGGATAAGTGTAAGCACATGTTGCTTGGTCGCCTGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

474

Amino Acids

51.71

Weight (kDa)

6.91

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 48 - 165 1.2e-23 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 205 - 328 1.7e-20 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1103, 1151
AccII CGCG 2 cut(s) 717, 1050
AccIII TCCGGA 1 cut(s) 46
AciI CCGC 6 cut(s) 521, 612, 715, 872, 1038, 1080
AclWI GGATC 1 cut(s) 894
AcoI YGGCCR 1 cut(s) 201
AcsI RAATTY 2 cut(s) 293, 635
AfaI GTAC 6 cut(s) 220, 240, 416, 676, 1126, 1332
AfiI CCNNNNNNNGG 2 cut(s) 509, 1079
AflIII ACRYGT 2 cut(s) 1048, 1401
AgsI TTSAA 3 cut(s) 118, 160, 838
AjnI CCWGG 3 cut(s) 17, 62, 580
AleI CACNNNNGTG 2 cut(s) 1080, 1220
AluBI AGCT 5 cut(s) 391, 701, 929, 1001, 1151
AluI AGCT 5 cut(s) 391, 701, 929, 1001, 1151
Alw21I GWGCWC 1 cut(s) 474
Alw26I GTCTC 3 cut(s) 300, 950, 1089
AlwI GGATC 1 cut(s) 894
Ama87I CYCGRG 1 cut(s) 124
Aor13HI TCCGGA 1 cut(s) 46
AoxI GGCC 4 cut(s) 201, 604, 1070, 1254
ApeKI GCWGC 5 cut(s) 83, 698, 761, 980, 1211
ApoI RAATTY 2 cut(s) 293, 635
AseI ATTAAT 1 cut(s) 828
AspA2I CCTAGG 1 cut(s) 607
AspLEI GCGC 1 cut(s) 719
AspS9I GGNCC 2 cut(s) 907, 1254
AsuC2I CCSGG 3 cut(s) 243, 491, 535
AsuHPI GGTGA 3 cut(s) 472, 1094, 1105
AvaI CYCGRG 1 cut(s) 124
AvaII GGWCC 1 cut(s) 907
AvrII CCTAGG 1 cut(s) 607
BalI TGGCCA 1 cut(s) 203
BanII GRGCYC 1 cut(s) 657
BbsI GAAGAC 3 cut(s) 845, 1287, 1349
Bbv12I GWGCWC 1 cut(s) 474
BbvI GCAGC 5 cut(s) 70, 710, 748, 967, 1198
BccI CCATC 7 cut(s) 72, 416, 503, 773, 916, 1244, 1331
BceAI ACGGC 1 cut(s) 1093
BcgI CGANNNNNNTGC 2 cut(s) 1301, 1335
BciT130I CCWGG 3 cut(s) 19, 64, 582
BciVI GTATCC 1 cut(s) 497
BcnI CCSGG 3 cut(s) 243, 491, 535
BcoDI GTCTC 3 cut(s) 300, 950, 1089
BfaI CTAG 3 cut(s) 371, 608, 815
BfmI CTRYAG 2 cut(s) 403, 801
BfuI GTATCC 1 cut(s) 497
BisI GCNGC 5 cut(s) 84, 699, 762, 981, 1212
BlnI CCTAGG 1 cut(s) 607
BlpI GCTNAGC 1 cut(s) 734
BlsI GCNGC 5 cut(s) 85, 700, 763, 982, 1213
BmcAI AGTACT 2 cut(s) 416, 676
Bme1390I CCNGG 6 cut(s) 19, 64, 243, 491, 535, 582
Bme18I GGWCC 1 cut(s) 907
BmeT110I CYCGRG 1 cut(s) 124
BmgT120I GGNCC 2 cut(s) 907, 1254
BmiI GGNNCC 3 cut(s) 427, 798, 1255
BmrFI CCNGG 6 cut(s) 19, 64, 243, 491, 535, 582
BmsI GCATC 3 cut(s) 598, 712, 1286
BpiI GAAGAC 3 cut(s) 845, 1287, 1349
Bpu1102I GCTNAGC 1 cut(s) 734
BpuEI CTTGAG 2 cut(s) 577, 641
BpuMI CCSGG 3 cut(s) 243, 491, 535
BsaJI CCNNGG 8 cut(s) 62, 242, 607, 642, 765, 910, 1162, 1232
BsaWI WCCGGW 1 cut(s) 46
BsaXI ACNNNNNCTCC 2 cut(s) 297, 327
Bsc4I CCNNNNNNNGG 2 cut(s) 509, 1079
Bse1I ACTGG 2 cut(s) 888, 893
BseAI TCCGGA 1 cut(s) 46
BseBI CCWGG 3 cut(s) 19, 64, 582
BseDI CCNNGG 8 cut(s) 62, 242, 607, 642, 765, 910, 1162, 1232
BseGI GGATG 4 cut(s) 83, 784, 1252, 1342
BseLI CCNNNNNNNGG 2 cut(s) 509, 1079
BseMII CTCAG 2 cut(s) 748, 1353
BseNI ACTGG 2 cut(s) 888, 893
BseXI GCAGC 5 cut(s) 70, 710, 748, 967, 1198
BseYI CCCAGC 1 cut(s) 387
Bsh1236I CGCG 2 cut(s) 717, 1050
BshFI GGCC 4 cut(s) 203, 606, 1072, 1256
BsiHKAI GWGCWC 1 cut(s) 474
BsiHKCI CYCGRG 1 cut(s) 124
BsiSI CCGG 4 cut(s) 47, 242, 491, 534
BslFI GGGAC 1 cut(s) 369
BslI CCNNNNNNNGG 2 cut(s) 509, 1079
BsmAI GTCTC 3 cut(s) 300, 950, 1089
BsmBI CGTCTC 1 cut(s) 950
BsmFI GGGAC 1 cut(s) 369
BsnI GGCC 4 cut(s) 203, 606, 1072, 1256
BsoBI CYCGRG 1 cut(s) 124
Bsp1286I GDGCHC 2 cut(s) 474, 657
Bsp13I TCCGGA 1 cut(s) 46
Bsp1407I TGTACA 1 cut(s) 1330
Bsp143I GATC 4 cut(s) 748, 886, 1224, 1268
Bsp1720I GCTNAGC 1 cut(s) 734
Bsp19I CCATGG 1 cut(s) 765
BspACI CCGC 6 cut(s) 521, 612, 715, 872, 1038, 1080
BspANI GGCC 4 cut(s) 203, 606, 1072, 1256
BspCNI CTCAG 2 cut(s) 747, 1354
BspEI TCCGGA 1 cut(s) 46
BspFNI CGCG 2 cut(s) 717, 1050
BspLI GGNNCC 3 cut(s) 427, 798, 1255
BspPI GGATC 1 cut(s) 894
BsrGI TGTACA 1 cut(s) 1330
BsrI ACTGG 2 cut(s) 888, 893
BssECI CCNNGG 8 cut(s) 62, 242, 607, 642, 765, 910, 1162, 1232
BssMI GATC 4 cut(s) 748, 886, 1224, 1268
BssT1I CCWWGG 5 cut(s) 607, 642, 765, 910, 1232
Bst2UI CCWGG 3 cut(s) 19, 64, 582
Bst4CI ACNGT 6 cut(s) 383, 407, 667, 796, 805, 862
BstAPI GCANNNNNTGC 1 cut(s) 1405
BstAUI TGTACA 1 cut(s) 1330
BstC8I GCNNGC 1 cut(s) 1418
BstDEI CTNAG 2 cut(s) 734, 1362
BstDSI CCRYGG 1 cut(s) 765
BstEII GGTNACC 1 cut(s) 1111
BstF5I GGATG 4 cut(s) 83, 784, 1252, 1342
BstFNI CGCG 2 cut(s) 717, 1050
BstHHI GCGC 1 cut(s) 719
BstKTI GATC 4 cut(s) 751, 889, 1227, 1271
BstMAI GTCTC 3 cut(s) 300, 950, 1089
BstMBI GATC 4 cut(s) 748, 886, 1224, 1268
BstMWI GCNNNNNNNGC 2 cut(s) 935, 1405
BstNI CCWGG 3 cut(s) 19, 64, 582
BstNSI RCATGY 1 cut(s) 1405
BstPI GGTNACC 1 cut(s) 1111
BstSCI CCNGG 6 cut(s) 17, 62, 241, 489, 533, 580
BstSFI CTRYAG 2 cut(s) 403, 801
BstUI CGCG 2 cut(s) 717, 1050
BstV1I GCAGC 5 cut(s) 70, 710, 748, 967, 1198
BstV2I GAAGAC 3 cut(s) 845, 1287, 1349
BstX2I RGATCY 1 cut(s) 886
BstXI CCANNNNNNTGG 1 cut(s) 649
BstYI RGATCY 1 cut(s) 886
BsuI GTATCC 1 cut(s) 497
BsuRI GGCC 4 cut(s) 203, 606, 1072, 1256
BtgI CCRYGG 1 cut(s) 765
BtsCI GGATG 4 cut(s) 83, 784, 1252, 1342
BtsI GCAGTG 1 cut(s) 1305
BtsIMutI CAGTG 4 cut(s) 672, 738, 881, 1305
Cac8I GCNNGC 1 cut(s) 1418
CfoI GCGC 1 cut(s) 719
Cfr13I GGNCC 2 cut(s) 907, 1254
CseI GACGC 2 cut(s) 967, 1311
CsiI ACCWGGT 1 cut(s) 580
Csp6I GTAC 6 cut(s) 219, 239, 415, 675, 1125, 1331
CviQI GTAC 6 cut(s) 219, 239, 415, 675, 1125, 1331
DdeI CTNAG 2 cut(s) 734, 1362
DpnI GATC 4 cut(s) 750, 888, 1226, 1270
DpnII GATC 4 cut(s) 748, 886, 1224, 1268
DraI TTTAAA 1 cut(s) 298
DrdI GACNNNNNNGTC 2 cut(s) 1103, 1151
DseDI GACNNNNNNGTC 2 cut(s) 1103, 1151
EaeI YGGCCR 1 cut(s) 201
Eco130I CCWWGG 5 cut(s) 607, 642, 765, 910, 1232
Eco24I GRGCYC 1 cut(s) 657
Eco32I GATATC 1 cut(s) 1359
Eco47I GGWCC 1 cut(s) 907
Eco88I CYCGRG 1 cut(s) 124
Eco91I GGTNACC 1 cut(s) 1111
EcoO109I RGGNCCY 1 cut(s) 1254
EcoO65I GGTNACC 1 cut(s) 1111
EcoRII CCWGG 3 cut(s) 17, 62, 580
EcoRV GATATC 1 cut(s) 1359
EcoT14I CCWWGG 5 cut(s) 607, 642, 765, 910, 1232
EcoT22I ATGCAT 2 cut(s) 591, 727
EcoT38I GRGCYC 1 cut(s) 657
ErhI CCWWGG 5 cut(s) 607, 642, 765, 910, 1232
Esp3I CGTCTC 1 cut(s) 950
FalI AAGNNNNNCTT 2 cut(s) 1100, 1132
FaqI GGGAC 1 cut(s) 369
Fnu4HI GCNGC 5 cut(s) 84, 699, 762, 981, 1212
FokI GGATG 4 cut(s) 90, 791, 1259, 1349
FriOI GRGCYC 1 cut(s) 657
Fsp4HI GCNGC 5 cut(s) 84, 699, 762, 981, 1212
FspBI CTAG 3 cut(s) 371, 608, 815
GlaI GCGC 1 cut(s) 718
GluI GCNGC 5 cut(s) 84, 699, 762, 981, 1212
GsaI CCCAGC 1 cut(s) 391
HaeIII GGCC 4 cut(s) 203, 606, 1072, 1256
HapII CCGG 4 cut(s) 47, 242, 491, 534
HgaI GACGC 2 cut(s) 967, 1311
HhaI GCGC 1 cut(s) 719
Hin6I GCGC 1 cut(s) 717
HinP1I GCGC 1 cut(s) 717
HincII GTYRAC 2 cut(s) 13, 1156
HindII GTYRAC 2 cut(s) 13, 1156
HinfI GANTC 4 cut(s) 38, 156, 335, 1175
HpaI GTTAAC 1 cut(s) 13
HpaII CCGG 4 cut(s) 47, 242, 491, 534
HphI GGTGA 3 cut(s) 472, 1094, 1105
Hpy166II GTNNAC 4 cut(s) 13, 334, 364, 1156
Hpy188I TCNGA 5 cut(s) 190, 234, 340, 753, 1363
Hpy188III TCNNGA 7 cut(s) 47, 124, 126, 289, 506, 815, 1057
Hpy8I GTNNAC 4 cut(s) 13, 334, 364, 1156
Hpy99I CGWCG 2 cut(s) 148, 1327
HpyAV CCTTC 7 cut(s) 123, 124, 688, 909, 946, 1135, 1138
HpyCH4III ACNGT 6 cut(s) 383, 407, 667, 796, 805, 862
HpyCH4IV ACGT 1 cut(s) 150
HpyCH4V TGCA 8 cut(s) 86, 282, 327, 589, 725, 877, 1045, 1420
HpyF10VI GCNNNNNNNGC 2 cut(s) 935, 1405
HpyF3I CTNAG 2 cut(s) 734, 1362
HpySE526I ACGT 1 cut(s) 150
HspAI GCGC 1 cut(s) 717
Kpn2I TCCGGA 1 cut(s) 46
KspAI GTTAAC 1 cut(s) 13
Kzo9I GATC 4 cut(s) 748, 886, 1224, 1268
LmnI GCTCC 3 cut(s) 49, 140, 523
Lsp1109I GCAGC 5 cut(s) 70, 710, 748, 967, 1198
LweI GCATC 3 cut(s) 598, 712, 1286
MabI ACCWGGT 1 cut(s) 580
MaeI CTAG 3 cut(s) 371, 608, 815
MaeII ACGT 1 cut(s) 150
MaeIII GTNAC 7 cut(s) 265, 443, 460, 620, 661, 856, 1111
MalI GATC 4 cut(s) 750, 888, 1226, 1270
MboI GATC 4 cut(s) 748, 886, 1224, 1268
MboII GAAGA 6 cut(s) 703, 850, 881, 931, 1287, 1354
MfeI CAATTG 2 cut(s) 72, 1020
MflI RGATCY 1 cut(s) 886
MhlI GDGCHC 2 cut(s) 474, 657
MlsI TGGCCA 1 cut(s) 203
MluCI AATT 7 cut(s) 72, 293, 355, 376, 635, 829, 1020
MluI ACGCGT 1 cut(s) 1048
MluNI TGGCCA 1 cut(s) 203
MlyI GAGTC 1 cut(s) 329
MmeI TCCRAC 1 cut(s) 283
MnlI CCTC 9 cut(s) 434, 513, 751, 822, 938, 1003, 1172, 1267, 1357
Mox20I TGGCCA 1 cut(s) 203
Mph1103I ATGCAT 2 cut(s) 591, 727
MroI TCCGGA 1 cut(s) 46
MscI TGGCCA 1 cut(s) 203
MseI TTAA 3 cut(s) 12, 297, 828
MslI CAYNNNNRTG 6 cut(s) 197, 594, 629, 1040, 1080, 1220
Msp20I TGGCCA 1 cut(s) 203
MspA1I CMGCKG 1 cut(s) 1001
MspI CCGG 4 cut(s) 47, 242, 491, 534
MspR9I CCNGG 6 cut(s) 19, 64, 243, 491, 535, 582
MunI CAATTG 2 cut(s) 72, 1020
MvaI CCWGG 3 cut(s) 19, 64, 582
MvnI CGCG 2 cut(s) 717, 1050
MwoI GCNNNNNNNGC 2 cut(s) 935, 1405
NciI CCSGG 3 cut(s) 243, 491, 535
NcoI CCATGG 1 cut(s) 765
NdeII GATC 4 cut(s) 748, 886, 1224, 1268
NlaIV GGNNCC 3 cut(s) 427, 798, 1255
NmeAIII GCCGAG 1 cut(s) 1118
NmuCI GTSAC 4 cut(s) 265, 460, 620, 1111
NsiI ATGCAT 2 cut(s) 591, 727
NspI RCATGY 1 cut(s) 1405
OliI CACNNNNGTG 2 cut(s) 1080, 1220
PaeR7I CTCGAG 1 cut(s) 124
PciI ACATGT 1 cut(s) 1401
PfeI GAWTC 3 cut(s) 38, 156, 1175
PflFI GACNNNGTC 1 cut(s) 311
PfoI TCCNGGA 2 cut(s) 17, 489
PkrI GCNGC 5 cut(s) 85, 700, 763, 982, 1213
PleI GAGTC 1 cut(s) 329
PpsI GAGTC 1 cut(s) 329
PscI ACATGT 1 cut(s) 1401
PshBI ATTAAT 1 cut(s) 828
Psp6I CCWGG 3 cut(s) 17, 62, 580
PspEI GGTNACC 1 cut(s) 1111
PspFI CCCAGC 1 cut(s) 387
PspGI CCWGG 3 cut(s) 17, 62, 580
PspN4I GGNNCC 3 cut(s) 427, 798, 1255
PspPI GGNCC 2 cut(s) 907, 1254
PsuI RGATCY 1 cut(s) 886
PsyI GACNNNGTC 1 cut(s) 311
PvuII CAGCTG 1 cut(s) 1001
RsaI GTAC 6 cut(s) 220, 240, 416, 676, 1126, 1332
RsaNI GTAC 6 cut(s) 219, 239, 415, 675, 1125, 1331
RseI CAYNNNNRTG 6 cut(s) 197, 594, 629, 1040, 1080, 1220
SaqAI TTAA 3 cut(s) 12, 297, 828
SatI GCNGC 5 cut(s) 84, 699, 762, 981, 1212
Sau3AI GATC 4 cut(s) 748, 886, 1224, 1268
Sau96I GGNCC 2 cut(s) 907, 1254
ScaI AGTACT 2 cut(s) 416, 676
SchI GAGTC 1 cut(s) 329
ScrFI CCNGG 6 cut(s) 19, 64, 243, 491, 535, 582
SduI GDGCHC 2 cut(s) 474, 657
SexAI ACCWGGT 1 cut(s) 580
SfaNI GCATC 3 cut(s) 598, 712, 1286
SfcI CTRYAG 2 cut(s) 403, 801
Sfr274I CTCGAG 1 cut(s) 124
SinI GGWCC 1 cut(s) 907
SlaI CTCGAG 1 cut(s) 124
SmiMI CAYNNNNRTG 6 cut(s) 197, 594, 629, 1040, 1080, 1220
SmlI CTYRAG 3 cut(s) 124, 556, 656
SmoI CTYRAG 3 cut(s) 124, 556, 656
Sse9I AATT 7 cut(s) 72, 293, 355, 376, 635, 829, 1020
SsiI CCGC 6 cut(s) 521, 612, 715, 872, 1038, 1080
SspMI CTAG 3 cut(s) 371, 608, 815
StyD4I CCNGG 6 cut(s) 17, 62, 241, 489, 533, 580
StyI CCWWGG 5 cut(s) 607, 642, 765, 910, 1232
TaaI ACNGT 6 cut(s) 383, 407, 667, 796, 805, 862
TaiI ACGT 1 cut(s) 153
TaqI TCGA 7 cut(s) 125, 449, 789, 808, 1056, 1259, 1325
TaqII GACCGA 1 cut(s) 357
TasI AATT 7 cut(s) 72, 293, 355, 376, 635, 829, 1020
TatI WGTACW 3 cut(s) 414, 674, 1330
TfiI GAWTC 3 cut(s) 38, 156, 1175
Tru1I TTAA 3 cut(s) 12, 297, 828
Tru9I TTAA 3 cut(s) 12, 297, 828
TscAI CASTG 4 cut(s) 672, 745, 888, 1312
TseFI GTSAC 4 cut(s) 265, 460, 620, 1111
TseI GCWGC 5 cut(s) 83, 698, 761, 980, 1211
Tsp45I GTSAC 4 cut(s) 265, 460, 620, 1111
TspDTI ATGAA 5 cut(s) 264, 466, 965, 1167, 1179
TspGWI ACGGA 2 cut(s) 161, 453
TspRI CASTG 4 cut(s) 672, 745, 888, 1312
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 1 cut(s) 907
VspI ATTAAT 1 cut(s) 828
XapI RAATTY 2 cut(s) 293, 635
XbaI TCTAGA 1 cut(s) 814
XceI RCATGY 1 cut(s) 1405
XcmI CCANNNNNNNNNTGG 1 cut(s) 772
XhoI CTCGAG 1 cut(s) 124
XmaJI CCTAGG 1 cut(s) 607
XspI CTAG 3 cut(s) 371, 608, 815
ZrmI AGTACT 2 cut(s) 416, 676
Zsp2I ATGCAT 2 cut(s) 591, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.