Dehydrogenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| MBTP1_N | PF23001 | 42 - 114 | 4.6e-13 | Membrane-bound Site-1 Protease Family N-terminal domain |
| Peptidase_S8 | PF00082 | 196 - 448 | 8.5e-42 | Subtilase family |
| MBTPS1_3rd | PF23094 | 476 - 604 | 2.7e-54 | MBTPS1, third Ig-like domain |
| MBTPS1_4th | PF23090 | 605 - 876 | 2.2e-146 | MBTPS1, fourth GATase-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1941 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 22 |
| AatII | GACGTC | 1 cut(s) | 348 |
| Acc36I | ACCTGC | 3 cut(s) | 1941, 2256, 2770 |
| AccB1I | GGYRCC | 1 cut(s) | 1496 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2216 |
| AccBSI | CCGCTC | 2 cut(s) | 557, 661 |
| AccI | GTMKAC | 3 cut(s) | 581, 1731, 2154 |
| AccIII | TCCGGA | 1 cut(s) | 267 |
| AcoI | YGGCCR | 5 cut(s) | 3, 234, 434, 603, 1117 |
| AcsI | RAATTY | 3 cut(s) | 1942, 2686, 2842 |
| AcuI | CTGAAG | 3 cut(s) | 1418, 1566, 1769 |
| AcyI | GRCGYC | 1 cut(s) | 345 |
| AfaI | GTAC | 9 cut(s) | 152, 589, 873, 1093, 1177, 2069, 2373, 2424, 2475 |
| AfeI | AGCGCT | 1 cut(s) | 1659 |
| AflIII | ACRYGT | 2 cut(s) | 1962, 2192 |
| AgeI | ACCGGT | 2 cut(s) | 584, 2582 |
| AhlI | ACTAGT | 1 cut(s) | 1202 |
| AjiI | CACGTC | 1 cut(s) | 24 |
| AjnI | CCWGG | 5 cut(s) | 284, 1867, 2388, 2806, 2827 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 282, 314, 1292, 1324 |
| AleI | CACNNNNGTG | 3 cut(s) | 1205, 1778, 2162 |
| Alw21I | GWGCWC | 2 cut(s) | 519, 1690 |
| Alw26I | GTCTC | 3 cut(s) | 64, 1878, 2673 |
| Alw44I | GTGCAC | 1 cut(s) | 1686 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2216 |
| Aor13HI | TCCGGA | 1 cut(s) | 267 |
| Aor51HI | AGCGCT | 1 cut(s) | 1659 |
| AoxI | GGCC | 9 cut(s) | 3, 234, 411, 434, 603, 1117, 1466, 1637, 2409 |
| ApaLI | GTGCAC | 1 cut(s) | 1686 |
| ApeKI | GCWGC | 2 cut(s) | 1322, 2092 |
| ApoI | RAATTY | 3 cut(s) | 1942, 2686, 2842 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 899, 931, 2729, 2761 |
| AsiGI | ACCGGT | 2 cut(s) | 584, 2582 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 446 |
| AspLEI | GCGC | 1 cut(s) | 1660 |
| AspS9I | GGNCC | 9 cut(s) | 265, 411, 893, 907, 983, 1337, 1467, 1840, 2409 |
| AsuC2I | CCSGG | 3 cut(s) | 173, 438, 1749 |
| AsuII | TTCGAA | 1 cut(s) | 646 |
| AvaII | GGWCC | 6 cut(s) | 265, 893, 907, 983, 1337, 1840 |
| AxyI | CCTNAGG | 1 cut(s) | 2436 |
| BaeGI | GKGCMC | 1 cut(s) | 1690 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 579, 612 |
| BalI | TGGCCA | 2 cut(s) | 5, 605 |
| BamHI | GGATCC | 2 cut(s) | 1163, 2431 |
| BanI | GGYRCC | 1 cut(s) | 1496 |
| BanII | GRGCYC | 1 cut(s) | 519 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1584, 1616 |
| BauI | CACGAG | 2 cut(s) | 1080, 1413 |
| BbsI | GAAGAC | 1 cut(s) | 477 |
| Bbv12I | GWGCWC | 2 cut(s) | 519, 1690 |
| BbvI | GCAGC | 2 cut(s) | 1309, 2079 |
| BccI | CCATC | 8 cut(s) | 71, 201, 272, 316, 416, 974, 1750, 2155 |
| BceAI | ACGGC | 4 cut(s) | 468, 1104, 1132, 2978 |
| BciT130I | CCWGG | 5 cut(s) | 286, 1869, 2390, 2808, 2829 |
| BciVI | GTATCC | 3 cut(s) | 676, 1270, 2906 |
| BclI | TGATCA | 1 cut(s) | 1057 |
| BcnI | CCSGG | 3 cut(s) | 173, 438, 1749 |
| BcoDI | GTCTC | 3 cut(s) | 64, 1878, 2673 |
| BcuI | ACTAGT | 1 cut(s) | 1202 |
| BfaI | CTAG | 6 cut(s) | 107, 1203, 1431, 1881, 2964, 3066 |
| BfmI | CTRYAG | 2 cut(s) | 1051, 2929 |
| BfoI | RGCGCY | 1 cut(s) | 1661 |
| BfuAI | ACCTGC | 3 cut(s) | 1941, 2256, 2770 |
| BfuI | GTATCC | 3 cut(s) | 676, 1270, 2906 |
| BglII | AGATCT | 2 cut(s) | 530, 2053 |
| BisI | GCNGC | 5 cut(s) | 434, 1106, 1323, 1711, 2093 |
| BlsI | GCNGC | 5 cut(s) | 435, 1107, 1324, 1712, 2094 |
| BmcAI | AGTACT | 2 cut(s) | 1093, 2069 |
| Bme1390I | CCNGG | 8 cut(s) | 173, 286, 438, 1749, 1869, 2390, 2808, 2829 |
| Bme18I | GGWCC | 6 cut(s) | 265, 893, 907, 983, 1337, 1840 |
| BmgBI | CACGTC | 1 cut(s) | 24 |
| BmgT120I | GGNCC | 9 cut(s) | 265, 411, 893, 907, 983, 1337, 1467, 1840, 2409 |
| BmiI | GGNNCC | 9 cut(s) | 283, 412, 830, 1165, 1498, 1841, 2256, 2410, 2433 |
| BmrFI | CCNGG | 8 cut(s) | 173, 286, 438, 1749, 1869, 2390, 2808, 2829 |
| BmrI | ACTGGG | 2 cut(s) | 2129, 2897 |
| BmuI | ACTGGG | 2 cut(s) | 2129, 2897 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2210, 2529 |
| BpiI | GAAGAC | 1 cut(s) | 477 |
| BpmI | CTGGAG | 4 cut(s) | 1851, 2193, 2238, 3046 |
| Bpu14I | TTCGAA | 1 cut(s) | 646 |
| BpuEI | CTTGAG | 2 cut(s) | 901, 2581 |
| BpuMI | CCSGG | 3 cut(s) | 173, 438, 1749 |
| BsaAI | YACGTR | 1 cut(s) | 2195 |
| BsaHI | GRCGYC | 1 cut(s) | 345 |
| BsaJI | CCNNGG | 4 cut(s) | 237, 285, 437, 1640 |
| BsaWI | WCCGGW | 3 cut(s) | 267, 584, 2582 |
| Bse118I | RCCGGY | 3 cut(s) | 196, 584, 2582 |
| Bse21I | CCTNAGG | 1 cut(s) | 2436 |
| Bse3DI | GCAATG | 3 cut(s) | 1062, 1720, 1909 |
| BseAI | TCCGGA | 1 cut(s) | 267 |
| BseBI | CCWGG | 5 cut(s) | 286, 1869, 2390, 2808, 2829 |
| BseDI | CCNNGG | 4 cut(s) | 237, 285, 437, 1640 |
| BseMI | GCAATG | 3 cut(s) | 1062, 1720, 1909 |
| BseMII | CTCAG | 4 cut(s) | 516, 2130, 2427, 2429 |
| BseRI | GAGGAG | 6 cut(s) | 105, 389, 398, 401, 404, 2093 |
| BseSI | GKGCMC | 1 cut(s) | 1690 |
| BseX3I | CGGCCG | 2 cut(s) | 434, 1117 |
| BseXI | GCAGC | 2 cut(s) | 1309, 2079 |
| BseYI | CCCAGC | 1 cut(s) | 1976 |
| BsgI | GTGCAG | 1 cut(s) | 1380 |
| Bsh1285I | CGRYCG | 2 cut(s) | 437, 1120 |
| BshFI | GGCC | 9 cut(s) | 5, 236, 413, 436, 605, 1119, 1468, 1639, 2411 |
| BshNI | GGYRCC | 1 cut(s) | 1496 |
| BshTI | ACCGGT | 2 cut(s) | 584, 2582 |
| BsiEI | CGRYCG | 2 cut(s) | 437, 1120 |
| BsiHKAI | GWGCWC | 2 cut(s) | 519, 1690 |
| BsiSI | CCGG | 8 cut(s) | 172, 197, 233, 268, 437, 585, 1748, 2583 |
| BslFI | GGGAC | 6 cut(s) | 224, 724, 1009, 1853, 2050, 2773 |
| BsmAI | GTCTC | 3 cut(s) | 64, 1878, 2673 |
| BsmBI | CGTCTC | 2 cut(s) | 64, 2673 |
| BsmFI | GGGAC | 6 cut(s) | 224, 724, 1009, 1853, 2050, 2773 |
| BsmI | GAATGC | 3 cut(s) | 343, 839, 2872 |
| BsnI | GGCC | 9 cut(s) | 5, 236, 413, 436, 605, 1119, 1468, 1639, 2411 |
| Bsp119I | TTCGAA | 1 cut(s) | 646 |
| Bsp1286I | GDGCHC | 2 cut(s) | 519, 1690 |
| Bsp13I | TCCGGA | 1 cut(s) | 267 |
| Bsp1407I | TGTACA | 2 cut(s) | 2371, 2473 |
| Bsp19I | CCATGG | 1 cut(s) | 237 |
| BspANI | GGCC | 9 cut(s) | 5, 236, 413, 436, 605, 1119, 1468, 1639, 2411 |
| BspCNI | CTCAG | 4 cut(s) | 517, 2131, 2428, 2428 |
| BspEI | TCCGGA | 1 cut(s) | 267 |
| BspLI | GGNNCC | 9 cut(s) | 283, 412, 830, 1165, 1498, 1841, 2256, 2410, 2433 |
| BspMI | ACCTGC | 3 cut(s) | 1941, 2256, 2770 |
| BspQI | GCTCTTC | 2 cut(s) | 2031, 2818 |
| BspT104I | TTCGAA | 1 cut(s) | 646 |
| BspT107I | GGYRCC | 1 cut(s) | 1496 |
| BsrBI | CCGCTC | 2 cut(s) | 557, 661 |
| BsrDI | GCAATG | 3 cut(s) | 1062, 1720, 1909 |
| BsrFI | RCCGGY | 3 cut(s) | 196, 584, 2582 |
| BsrGI | TGTACA | 2 cut(s) | 2371, 2473 |
| BssAI | RCCGGY | 3 cut(s) | 196, 584, 2582 |
| BssECI | CCNNGG | 4 cut(s) | 237, 285, 437, 1640 |
| BssNAI | GTATAC | 2 cut(s) | 582, 1732 |
| BssNI | GRCGYC | 1 cut(s) | 345 |
| BssSI | CACGAG | 2 cut(s) | 1080, 1413 |
| BssT1I | CCWWGG | 2 cut(s) | 237, 1640 |
| Bst1107I | GTATAC | 2 cut(s) | 582, 1732 |
| Bst2BI | CACGAG | 2 cut(s) | 1080, 1413 |
| Bst2UI | CCWGG | 5 cut(s) | 286, 1869, 2390, 2808, 2829 |
| Bst4CI | ACNGT | 7 cut(s) | 1055, 1736, 1853, 2519, 2667, 2774, 2851 |
| Bst6I | CTCTTC | 5 cut(s) | 77, 389, 2031, 2058, 2818 |
| BstACI | GRCGYC | 1 cut(s) | 345 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2990 |
| BstAUI | TGTACA | 2 cut(s) | 2371, 2473 |
| BstBAI | YACGTR | 1 cut(s) | 2195 |
| BstBI | TTCGAA | 1 cut(s) | 646 |
| BstC8I | GCNNGC | 5 cut(s) | 194, 198, 1294, 1420, 2253 |
| BstDEI | CTNAG | 7 cut(s) | 368, 525, 1604, 1724, 2139, 2415, 2436 |
| BstDSI | CCRYGG | 1 cut(s) | 237 |
| BstH2I | RGCGCY | 1 cut(s) | 1661 |
| BstHHI | GCGC | 1 cut(s) | 1660 |
| BstMAI | GTCTC | 3 cut(s) | 64, 1878, 2673 |
| BstMCI | CGRYCG | 2 cut(s) | 437, 1120 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 501, 1188, 1197, 1666, 2947, 2990 |
| BstNI | CCWGG | 5 cut(s) | 286, 1869, 2390, 2808, 2829 |
| BstNSI | RCATGY | 2 cut(s) | 1669, 1966 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2210, 2529 |
| BstSCI | CCNGG | 8 cut(s) | 171, 284, 436, 1747, 1867, 2388, 2806, 2827 |
| BstSFI | CTRYAG | 2 cut(s) | 1051, 2929 |
| BstSLI | GKGCMC | 1 cut(s) | 1690 |
| BstV1I | GCAGC | 2 cut(s) | 1309, 2079 |
| BstV2I | GAAGAC | 1 cut(s) | 477 |
| BstX2I | RGATCY | 7 cut(s) | 109, 530, 1163, 2053, 2431, 2599, 3062 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 292, 1464, 1572 |
| BstYI | RGATCY | 7 cut(s) | 109, 530, 1163, 2053, 2431, 2599, 3062 |
| BstZ17I | GTATAC | 2 cut(s) | 582, 1732 |
| BstZI | CGGCCG | 2 cut(s) | 434, 1117 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2436 |
| BsuI | GTATCC | 3 cut(s) | 676, 1270, 2906 |
| BsuRI | GGCC | 9 cut(s) | 5, 236, 413, 436, 605, 1119, 1468, 1639, 2411 |
| BtgI | CCRYGG | 1 cut(s) | 237 |
| BtgZI | GCGATG | 1 cut(s) | 470 |
| BtrI | CACGTC | 1 cut(s) | 24 |
| BtsI | GCAGTG | 1 cut(s) | 489 |
| BtsIMutI | CAGTG | 5 cut(s) | 489, 1060, 2214, 2885, 2968 |
| BveI | ACCTGC | 3 cut(s) | 1941, 2256, 2770 |
| Cac8I | GCNNGC | 5 cut(s) | 194, 198, 1294, 1420, 2253 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2216 |
| CfoI | GCGC | 1 cut(s) | 1660 |
| Cfr10I | RCCGGY | 3 cut(s) | 196, 584, 2582 |
| Cfr13I | GGNCC | 9 cut(s) | 265, 411, 893, 907, 983, 1337, 1467, 1840, 2409 |
| Csp6I | GTAC | 9 cut(s) | 151, 588, 872, 1092, 1176, 2068, 2372, 2423, 2474 |
| CspAI | ACCGGT | 2 cut(s) | 584, 2582 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1200, 1235 |
| CviQI | GTAC | 9 cut(s) | 151, 588, 872, 1092, 1176, 2068, 2372, 2423, 2474 |
| DdeI | CTNAG | 7 cut(s) | 368, 525, 1604, 1724, 2139, 2415, 2436 |
| DraI | TTTAAA | 1 cut(s) | 1284 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 22 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 22 |
| EaeI | YGGCCR | 5 cut(s) | 3, 234, 434, 603, 1117 |
| EagI | CGGCCG | 2 cut(s) | 434, 1117 |
| Eam1104I | CTCTTC | 5 cut(s) | 77, 389, 2031, 2058, 2818 |
| EarI | CTCTTC | 5 cut(s) | 77, 389, 2031, 2058, 2818 |
| EciI | GGCGGA | 1 cut(s) | 215 |
| Ecl136II | GAGCTC | 1 cut(s) | 517 |
| EclXI | CGGCCG | 2 cut(s) | 434, 1117 |
| Eco130I | CCWWGG | 2 cut(s) | 237, 1640 |
| Eco24I | GRGCYC | 1 cut(s) | 519 |
| Eco47I | GGWCC | 6 cut(s) | 265, 893, 907, 983, 1337, 1840 |
| Eco47III | AGCGCT | 1 cut(s) | 1659 |
| Eco52I | CGGCCG | 2 cut(s) | 434, 1117 |
| Eco53kI | GAGCTC | 1 cut(s) | 517 |
| Eco57I | CTGAAG | 3 cut(s) | 1418, 1566, 1769 |
| Eco81I | CCTNAGG | 1 cut(s) | 2436 |
| EcoICRI | GAGCTC | 1 cut(s) | 517 |
| EcoO109I | RGGNCCY | 1 cut(s) | 411 |
| EcoRI | GAATTC | 1 cut(s) | 2842 |
| EcoRII | CCWGG | 5 cut(s) | 284, 1867, 2388, 2806, 2827 |
| EcoT14I | CCWWGG | 2 cut(s) | 237, 1640 |
| EcoT22I | ATGCAT | 2 cut(s) | 841, 2332 |
| EcoT38I | GRGCYC | 1 cut(s) | 519 |
| ErhI | CCWWGG | 2 cut(s) | 237, 1640 |
| Esp3I | CGTCTC | 2 cut(s) | 64, 2673 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 2623, 2655, 2890, 2922 |
| FaqI | GGGAC | 6 cut(s) | 224, 724, 1009, 1853, 2050, 2773 |
| FauI | CCCGC | 2 cut(s) | 106, 645 |
| FauNDI | CATATG | 3 cut(s) | 1144, 1387, 2535 |
| FbaI | TGATCA | 1 cut(s) | 1057 |
| FblI | GTMKAC | 3 cut(s) | 581, 1731, 2154 |
| Fnu4HI | GCNGC | 5 cut(s) | 434, 1106, 1323, 1711, 2093 |
| FriOI | GRGCYC | 1 cut(s) | 519 |
| Fsp4HI | GCNGC | 5 cut(s) | 434, 1106, 1323, 1711, 2093 |
| FspBI | CTAG | 6 cut(s) | 107, 1203, 1431, 1881, 2964, 3066 |
| GlaI | GCGC | 1 cut(s) | 1659 |
| GluI | GCNGC | 5 cut(s) | 434, 1106, 1323, 1711, 2093 |
| GsaI | CCCAGC | 1 cut(s) | 1980 |
| GsuI | CTGGAG | 4 cut(s) | 1851, 2193, 2238, 3046 |
| HaeII | RGCGCY | 1 cut(s) | 1661 |
| HaeIII | GGCC | 9 cut(s) | 5, 236, 413, 436, 605, 1119, 1468, 1639, 2411 |
| HapII | CCGG | 8 cut(s) | 172, 197, 233, 268, 437, 585, 1748, 2583 |
| HhaI | GCGC | 1 cut(s) | 1660 |
| Hin1I | GRCGYC | 1 cut(s) | 345 |
| Hin6I | GCGC | 1 cut(s) | 1658 |
| HinP1I | GCGC | 1 cut(s) | 1658 |
| HincII | GTYRAC | 1 cut(s) | 2883 |
| HindII | GTYRAC | 1 cut(s) | 2883 |
| HindIII | AAGCTT | 1 cut(s) | 1189 |
| HpaII | CCGG | 8 cut(s) | 172, 197, 233, 268, 437, 585, 1748, 2583 |
| Hpy99I | CGWCG | 7 cut(s) | 137, 149, 253, 479, 3048, 3051, 3054 |
| HpyCH4III | ACNGT | 7 cut(s) | 1055, 1736, 1853, 2519, 2667, 2774, 2851 |
| HpyCH4IV | ACGT | 4 cut(s) | 23, 132, 345, 2194 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 501, 1188, 1197, 1666, 2947, 2990 |
| HpyF3I | CTNAG | 7 cut(s) | 368, 525, 1604, 1724, 2139, 2415, 2436 |
| HpySE526I | ACGT | 4 cut(s) | 23, 132, 345, 2194 |
| Hsp92I | GRCGYC | 1 cut(s) | 345 |
| HspAI | GCGC | 1 cut(s) | 1658 |
| Kpn2I | TCCGGA | 1 cut(s) | 267 |
| KroI | GCCGGC | 1 cut(s) | 196 |
| KroNI | GCCGGC | 1 cut(s) | 198 |
| Ksp22I | TGATCA | 1 cut(s) | 1057 |
| LguI | GCTCTTC | 2 cut(s) | 2031, 2818 |
| LmnI | GCTCC | 7 cut(s) | 281, 479, 514, 554, 658, 769, 2260 |
| Lsp1109I | GCAGC | 2 cut(s) | 1309, 2079 |
| MaeI | CTAG | 6 cut(s) | 107, 1203, 1431, 1881, 2964, 3066 |
| MaeII | ACGT | 4 cut(s) | 23, 132, 345, 2194 |
| MbiI | CCGCTC | 2 cut(s) | 557, 661 |
| MfeI | CAATTG | 1 cut(s) | 969 |
| MflI | RGATCY | 7 cut(s) | 109, 530, 1163, 2053, 2431, 2599, 3062 |
| MhlI | GDGCHC | 2 cut(s) | 519, 1690 |
| MlsI | TGGCCA | 2 cut(s) | 5, 605 |
| MluNI | TGGCCA | 2 cut(s) | 5, 605 |
| MlyI | GAGTC | 4 cut(s) | 991, 1880, 2200, 2732 |
| MmeI | TCCRAC | 2 cut(s) | 1250, 1832 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 605 |
| Mph1103I | ATGCAT | 2 cut(s) | 841, 2332 |
| MroI | TCCGGA | 1 cut(s) | 267 |
| MroNI | GCCGGC | 1 cut(s) | 196 |
| MroXI | GAANNNNTTC | 1 cut(s) | 446 |
| MscI | TGGCCA | 2 cut(s) | 5, 605 |
| MseI | TTAA | 8 cut(s) | 654, 689, 1125, 1283, 1674, 1790, 1857, 2109 |
| MslI | CAYNNNNRTG | 5 cut(s) | 455, 956, 1205, 1778, 2162 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 605 |
| MspA1I | CMGCKG | 1 cut(s) | 2705 |
| MspI | CCGG | 8 cut(s) | 172, 197, 233, 268, 437, 585, 1748, 2583 |
| MspR9I | CCNGG | 8 cut(s) | 173, 286, 438, 1749, 1869, 2390, 2808, 2829 |
| MunI | CAATTG | 1 cut(s) | 969 |
| Mva1269I | GAATGC | 3 cut(s) | 343, 839, 2872 |
| MvaI | CCWGG | 5 cut(s) | 286, 1869, 2390, 2808, 2829 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 501, 1188, 1197, 1666, 2947, 2990 |
| NaeI | GCCGGC | 1 cut(s) | 198 |
| NciI | CCSGG | 3 cut(s) | 173, 438, 1749 |
| NcoI | CCATGG | 1 cut(s) | 237 |
| NdeI | CATATG | 3 cut(s) | 1144, 1387, 2535 |
| NgoMIV | GCCGGC | 1 cut(s) | 196 |
| NlaIV | GGNNCC | 9 cut(s) | 283, 412, 830, 1165, 1498, 1841, 2256, 2410, 2433 |
| NmuCI | GTSAC | 4 cut(s) | 2212, 2440, 2735, 2966 |
| NsiI | ATGCAT | 2 cut(s) | 841, 2332 |
| NspI | RCATGY | 2 cut(s) | 1669, 1966 |
| NspV | TTCGAA | 1 cut(s) | 646 |
| OliI | CACNNNNGTG | 3 cut(s) | 1205, 1778, 2162 |
| PaqCI | CACCTGC | 1 cut(s) | 1941 |
| PciI | ACATGT | 1 cut(s) | 1962 |
| PciSI | GCTCTTC | 2 cut(s) | 2031, 2818 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 141, 458 |
| PctI | GAATGC | 3 cut(s) | 343, 839, 2872 |
| PdiI | GCCGGC | 1 cut(s) | 198 |
| PdmI | GAANNNNTTC | 1 cut(s) | 446 |
| PfeI | GAWTC | 8 cut(s) | 141, 1382, 1597, 1759, 2175, 2284, 2453, 2510 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2216 |
| PfoI | TCCNGGA | 2 cut(s) | 1747, 2388 |
| PinAI | ACCGGT | 2 cut(s) | 584, 2582 |
| PkrI | GCNGC | 5 cut(s) | 435, 1107, 1324, 1712, 2094 |
| PleI | GAGTC | 4 cut(s) | 991, 1880, 2200, 2732 |
| PpsI | GAGTC | 4 cut(s) | 991, 1880, 2200, 2732 |
| Ppu21I | YACGTR | 1 cut(s) | 2195 |
| PscI | ACATGT | 1 cut(s) | 1962 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2210, 2529 |
| Psp124BI | GAGCTC | 1 cut(s) | 519 |
| Psp6I | CCWGG | 5 cut(s) | 284, 1867, 2388, 2806, 2827 |
| PspFI | CCCAGC | 1 cut(s) | 1976 |
| PspGI | CCWGG | 5 cut(s) | 284, 1867, 2388, 2806, 2827 |
| PspN4I | GGNNCC | 9 cut(s) | 283, 412, 830, 1165, 1498, 1841, 2256, 2410, 2433 |
| PspPI | GGNCC | 9 cut(s) | 265, 411, 893, 907, 983, 1337, 1467, 1840, 2409 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2216 |
| PsuI | RGATCY | 7 cut(s) | 109, 530, 1163, 2053, 2431, 2599, 3062 |
| RsaI | GTAC | 9 cut(s) | 152, 589, 873, 1093, 1177, 2069, 2373, 2424, 2475 |
| RsaNI | GTAC | 9 cut(s) | 151, 588, 872, 1092, 1176, 2068, 2372, 2423, 2474 |
| RseI | CAYNNNNRTG | 5 cut(s) | 455, 956, 1205, 1778, 2162 |
| SacI | GAGCTC | 1 cut(s) | 519 |
| SapI | GCTCTTC | 2 cut(s) | 2031, 2818 |
| SaqAI | TTAA | 8 cut(s) | 654, 689, 1125, 1283, 1674, 1790, 1857, 2109 |
| SatI | GCNGC | 5 cut(s) | 434, 1106, 1323, 1711, 2093 |
| Sau96I | GGNCC | 9 cut(s) | 265, 411, 893, 907, 983, 1337, 1467, 1840, 2409 |
| ScaI | AGTACT | 2 cut(s) | 1093, 2069 |
| SchI | GAGTC | 4 cut(s) | 991, 1880, 2200, 2732 |
| ScrFI | CCNGG | 8 cut(s) | 173, 286, 438, 1749, 1869, 2390, 2808, 2829 |
| SduI | GDGCHC | 2 cut(s) | 519, 1690 |
| SfcI | CTRYAG | 2 cut(s) | 1051, 2929 |
| SfuI | TTCGAA | 1 cut(s) | 646 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2582 |
| SinI | GGWCC | 6 cut(s) | 265, 893, 907, 983, 1337, 1840 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 455, 956, 1205, 1778, 2162 |
| SmlI | CTYRAG | 2 cut(s) | 880, 2560 |
| SmoI | CTYRAG | 2 cut(s) | 880, 2560 |
| SpeI | ACTAGT | 1 cut(s) | 1202 |
| SspI | AATATT | 2 cut(s) | 652, 2925 |
| SspMI | CTAG | 6 cut(s) | 107, 1203, 1431, 1881, 2964, 3066 |
| SstI | GAGCTC | 1 cut(s) | 519 |
| StyD4I | CCNGG | 8 cut(s) | 171, 284, 436, 1747, 1867, 2388, 2806, 2827 |
| StyI | CCWWGG | 2 cut(s) | 237, 1640 |
| TaaI | ACNGT | 7 cut(s) | 1055, 1736, 1853, 2519, 2667, 2774, 2851 |
| TaiI | ACGT | 4 cut(s) | 26, 135, 348, 2197 |
| TaqII | GACCGA | 1 cut(s) | 2611 |
| TatI | WGTACW | 8 cut(s) | 150, 871, 1091, 1175, 2067, 2371, 2422, 2473 |
| TauI | GCSGC | 3 cut(s) | 436, 1108, 1713 |
| TfiI | GAWTC | 8 cut(s) | 141, 1382, 1597, 1759, 2175, 2284, 2453, 2510 |
| Tru1I | TTAA | 8 cut(s) | 654, 689, 1125, 1283, 1674, 1790, 1857, 2109 |
| Tru9I | TTAA | 8 cut(s) | 654, 689, 1125, 1283, 1674, 1790, 1857, 2109 |
| TscAI | CASTG | 5 cut(s) | 489, 1060, 2221, 2892, 2975 |
| TseFI | GTSAC | 4 cut(s) | 2212, 2440, 2735, 2966 |
| TseI | GCWGC | 2 cut(s) | 1322, 2092 |
| Tsp45I | GTSAC | 4 cut(s) | 2212, 2440, 2735, 2966 |
| TspDTI | ATGAA | 5 cut(s) | 31, 534, 1313, 1404, 1602 |
| TspGWI | ACGGA | 3 cut(s) | 266, 492, 2247 |
| TspRI | CASTG | 5 cut(s) | 489, 1060, 2221, 2892, 2975 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2216 |
| VneI | GTGCAC | 1 cut(s) | 1686 |
| VpaK11BI | GGWCC | 6 cut(s) | 265, 893, 907, 983, 1337, 1840 |
| XapI | RAATTY | 3 cut(s) | 1942, 2686, 2842 |
| XceI | RCATGY | 2 cut(s) | 1669, 1966 |
| XmiI | GTMKAC | 3 cut(s) | 581, 1731, 2154 |
| XmnI | GAANNNNTTC | 1 cut(s) | 446 |
| XspI | CTAG | 6 cut(s) | 107, 1203, 1431, 1881, 2964, 3066 |
| ZraI | GACGTC | 1 cut(s) | 346 |
| ZrmI | AGTACT | 2 cut(s) | 1093, 2069 |
| Zsp2I | ATGCAT | 2 cut(s) | 841, 2332 |