RchiOBHm_Chr2g0094851

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000167
Physical Location & Seq
Forward (+)
7749478 .. 7762742
13265 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46984

Sequence Viewer

Length: 1056 bp
ATGTCTCACGAGCAAGAACACCCCAAGAAGGCATTTGGATGGGCTGCAAGAGATTCATCTGGTGTTCTCTCCCCCTTCCGTTTCTCCAGAAGGGAAACCGGAGAGAAAGACGTGACGTTCAAAGTGTTGTACTGTGGGATTTGCCATTCGGACCTTCACAATGTCAAGAATGAATGGGGCTCCTCTACCTATCCTCTGGTTCCCGGCGGCCATGAGATTGTTGGTGAAGTAACGGAAGTAGGGAGCAATGTAAAAAAATTCAAAGTTGGAGACAAAGTCGGTGTTGGATGCTTAGTGGGAGCTTACCAATCTTGTGATAGTTGTACCGACCACCTTGAGAACTACTGCCCCAAACAAATACTCACGTACGGTGCCAAGTACTACGACGGAACCACCACCTATGGAGGTTACTCTGACATTATGGTGGCCGATGAACACTTCATAGTTCGCATCCCAAACAACCTACCGCTTGATAGTGCTGCTCCACTCCTATGTGCCGGGATTACAACCTACAGCCCCTTGAGATATTATGGACTAGACAAGCCCGGAATGCATGTGGGTGTGGTTGGCCTAGGCGGCTTAGGCCACGTCGCGGTGAAGTTTGCCAAGGCTATGGGGGTGAAGGTGACAGTGATCAGTACTTCCCCTAAGAAAGAGGAGGAGGCTATTAAACACCTTGGAGCTGACTCGTTTTTGGCTGCCATTGGTACCATGGATGGGATCATTGACACAGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGGTTTGTTGAAGTCTCATGGAAAGCTTGTTATGGTTGGTGCACCAGAAAAGCCTCTTGAGCTTCCGGTTTTTCCTTTACTCATGGGAAGGAAGATGGTAGCTGGTAGCCTCATTGGAGGTATGAAGGAGACACAGGAGATGATCGATTTTGCGGCCAAGCACAACATAACAACAGAGATCGAGGTTATCCCAATTGACTACTTGAACAATGCCATGGAGCGCCTTGCCAAAGCAGAAGTCAGATACCGTTTTGTCATTGACATTGGAAACACACTAAAGGCCAGCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

351

Amino Acids

38.03

Weight (kDa)

6.67

Isoelectric Point (pI)

34.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 34 - 152 1.9e-23 Alcohol dehydrogenase GroES-like domain
2-Hacid_dh_C PF02826 175 - 241 1.5e-06 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ADH_zinc_N PF00107 193 - 307 2.7e-18 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 707
AccB1I GGYRCC 2 cut(s) 371, 707
AccII CGCG 1 cut(s) 593
AciI CCGC 5 cut(s) 207, 467, 576, 593, 917
AclWI GGATC 1 cut(s) 728
AcoI YGGCCR 3 cut(s) 208, 426, 918
AcsI RAATTY 1 cut(s) 257
AfaI GTAC 6 cut(s) 131, 325, 368, 380, 640, 709
AfiI CCNNNNNNNGG 4 cut(s) 28, 592, 717, 764
AgsI TTSAA 4 cut(s) 121, 262, 775, 970
AjiI CACGTC 2 cut(s) 112, 589
AluBI AGCT 5 cut(s) 302, 683, 790, 826, 866
AluI AGCT 5 cut(s) 302, 683, 790, 826, 866
Alw21I GWGCWC 1 cut(s) 808
Alw26I GTCTC 4 cut(s) 9, 264, 783, 887
Alw44I GTGCAC 1 cut(s) 804
AlwI GGATC 1 cut(s) 728
AlwNI CAGNNNCTG 1 cut(s) 737
AoxI GGCC 6 cut(s) 208, 426, 568, 583, 918, 1044
ApaLI GTGCAC 1 cut(s) 804
ApeKI GCWGC 3 cut(s) 44, 479, 698
ApoI RAATTY 1 cut(s) 257
ArsI GACNNNNNNTTYG 2 cut(s) 987, 1019
Asp718I GGTACC 1 cut(s) 707
AspA2I CCTAGG 1 cut(s) 571
AspLEI GCGC 1 cut(s) 987
AspS9I GGNCC 1 cut(s) 151
AsuC2I CCSGG 3 cut(s) 204, 499, 546
AsuHPI GGTGA 4 cut(s) 236, 607, 631, 637
AvaII GGWCC 1 cut(s) 151
AvrII CCTAGG 1 cut(s) 571
BaeGI GKGCMC 1 cut(s) 808
BanI GGYRCC 2 cut(s) 371, 707
BanII GRGCYC 1 cut(s) 182
BauI CACGAG 1 cut(s) 8
Bbv12I GWGCWC 1 cut(s) 808
BbvI GCAGC 3 cut(s) 31, 466, 685
BccI CCATC 3 cut(s) 33, 710, 853
BclI TGATCA 1 cut(s) 633
BcnI CCSGG 3 cut(s) 204, 499, 546
BcoDI GTCTC 4 cut(s) 9, 264, 783, 887
BfaI CTAG 2 cut(s) 536, 572
BfmI CTRYAG 1 cut(s) 511
BfoI RGCGCY 1 cut(s) 988
BglI GCCNNNNNGGC 1 cut(s) 576
BisI GCNGC 6 cut(s) 45, 208, 480, 577, 699, 918
BlnI CCTAGG 1 cut(s) 571
BlsI GCNGC 6 cut(s) 46, 209, 481, 578, 700, 919
BmcAI AGTACT 2 cut(s) 380, 640
Bme1390I CCNGG 3 cut(s) 204, 499, 546
Bme18I GGWCC 1 cut(s) 151
BmgBI CACGTC 2 cut(s) 112, 589
BmgT120I GGNCC 1 cut(s) 151
BmiI GGNNCC 5 cut(s) 181, 201, 373, 391, 709
BmrFI CCNGG 3 cut(s) 204, 499, 546
BmsI GCATC 2 cut(s) 278, 459
BpmI CTGGAG 1 cut(s) 70
Bpu10I CCTNAGC 1 cut(s) 580
BpuEI CTTGAG 3 cut(s) 356, 541, 842
BpuMI CCSGG 3 cut(s) 204, 499, 546
Bsa29I ATCGAT 1 cut(s) 909
BsaAI YACGTR 1 cut(s) 366
BsaJI CCNNGG 5 cut(s) 571, 606, 676, 711, 978
BsaWI WCCGGW 2 cut(s) 98, 829
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 592, 717, 764
Bse3DI GCAATG 1 cut(s) 253
BseCI ATCGAT 1 cut(s) 909
BseDI CCNNGG 5 cut(s) 571, 606, 676, 711, 978
BseGI GGATG 5 cut(s) 44, 293, 450, 721, 745
BseLI CCNNNNNNNGG 4 cut(s) 28, 592, 717, 764
BseMI GCAATG 1 cut(s) 253
BseRI GAGGAG 3 cut(s) 172, 671, 674
BseSI GKGCMC 1 cut(s) 808
BseXI GCAGC 3 cut(s) 31, 466, 685
BsgI GTGCAG 1 cut(s) 723
Bsh1236I CGCG 1 cut(s) 593
BshFI GGCC 6 cut(s) 210, 428, 570, 585, 920, 1046
BshNI GGYRCC 2 cut(s) 371, 707
BshVI ATCGAT 1 cut(s) 909
BsiHKAI GWGCWC 1 cut(s) 808
BsiSI CCGG 5 cut(s) 99, 204, 498, 546, 830
BsiWI CGTACG 1 cut(s) 366
BslI CCNNNNNNNGG 4 cut(s) 28, 592, 717, 764
BsmAI GTCTC 4 cut(s) 9, 264, 783, 887
BsmI GAATGC 1 cut(s) 555
BsnI GGCC 6 cut(s) 210, 428, 570, 585, 920, 1046
Bsp1286I GDGCHC 2 cut(s) 182, 808
Bsp143I GATC 4 cut(s) 633, 720, 906, 942
Bsp19I CCATGG 2 cut(s) 711, 978
BspACI CCGC 5 cut(s) 207, 467, 576, 593, 917
BspANI GGCC 6 cut(s) 210, 428, 570, 585, 920, 1046
BspDI ATCGAT 1 cut(s) 909
BspFNI CGCG 1 cut(s) 593
BspLI GGNNCC 5 cut(s) 181, 201, 373, 391, 709
BspPI GGATC 1 cut(s) 728
BspT107I GGYRCC 2 cut(s) 371, 707
BsrDI GCAATG 1 cut(s) 253
BssECI CCNNGG 5 cut(s) 571, 606, 676, 711, 978
BssMI GATC 4 cut(s) 633, 720, 906, 942
BssSI CACGAG 1 cut(s) 8
BssT1I CCWWGG 5 cut(s) 571, 606, 676, 711, 978
Bst2BI CACGAG 1 cut(s) 8
Bst4CI ACNGT 5 cut(s) 134, 371, 631, 733, 1013
BstBAI YACGTR 1 cut(s) 366
BstC8I GCNNGC 1 cut(s) 1048
BstDEI CTNAG 3 cut(s) 292, 580, 648
BstDSI CCRYGG 2 cut(s) 711, 978
BstF5I GGATG 5 cut(s) 44, 293, 450, 721, 745
BstFNI CGCG 1 cut(s) 593
BstH2I RGCGCY 1 cut(s) 988
BstHHI GCGC 1 cut(s) 987
BstKTI GATC 4 cut(s) 636, 723, 909, 945
BstMAI GTCTC 4 cut(s) 9, 264, 783, 887
BstMBI GATC 4 cut(s) 633, 720, 906, 942
BstMWI GCNNNNNNNGC 4 cut(s) 550, 576, 582, 823
BstNSI RCATGY 1 cut(s) 557
BstSCI CCNGG 3 cut(s) 202, 497, 544
BstSFI CTRYAG 1 cut(s) 511
BstSLI GKGCMC 1 cut(s) 808
BstUI CGCG 1 cut(s) 593
BstV1I GCAGC 3 cut(s) 31, 466, 685
BstXI CCANNNNNNTGG 1 cut(s) 613
Bsu15I ATCGAT 1 cut(s) 909
BsuRI GGCC 6 cut(s) 210, 428, 570, 585, 920, 1046
BsuTUI ATCGAT 1 cut(s) 909
BtgI CCRYGG 2 cut(s) 711, 978
BtrI CACGTC 2 cut(s) 112, 589
BtsCI GGATG 5 cut(s) 44, 293, 450, 721, 745
BtsIMutI CAGTG 1 cut(s) 636
Cac8I GCNNGC 1 cut(s) 1048
CaiI CAGNNNCTG 1 cut(s) 737
CfoI GCGC 1 cut(s) 987
Cfr13I GGNCC 1 cut(s) 151
ClaI ATCGAT 1 cut(s) 909
Csp6I GTAC 6 cut(s) 130, 324, 367, 379, 639, 708
CviAII CATG 6 cut(s) 212, 554, 712, 782, 847, 979
CviQI GTAC 6 cut(s) 130, 324, 367, 379, 639, 708
DdeI CTNAG 3 cut(s) 292, 580, 648
DpnI GATC 4 cut(s) 635, 722, 908, 944
DpnII GATC 4 cut(s) 633, 720, 906, 942
EaeI YGGCCR 3 cut(s) 208, 426, 918
Eco130I CCWWGG 5 cut(s) 571, 606, 676, 711, 978
Eco24I GRGCYC 1 cut(s) 182
Eco47I GGWCC 1 cut(s) 151
EcoT14I CCWWGG 5 cut(s) 571, 606, 676, 711, 978
EcoT22I ATGCAT 1 cut(s) 555
EcoT38I GRGCYC 1 cut(s) 182
ErhI CCWWGG 5 cut(s) 571, 606, 676, 711, 978
FaeI CATG 6 cut(s) 215, 557, 715, 785, 850, 982
FatI CATG 6 cut(s) 211, 553, 711, 781, 846, 978
FbaI TGATCA 1 cut(s) 633
Fnu4HI GCNGC 6 cut(s) 45, 208, 480, 577, 699, 918
FokI GGATG 5 cut(s) 51, 300, 437, 728, 732
FriOI GRGCYC 1 cut(s) 182
Fsp4HI GCNGC 6 cut(s) 45, 208, 480, 577, 699, 918
FspBI CTAG 2 cut(s) 536, 572
GlaI GCGC 1 cut(s) 986
GluI GCNGC 6 cut(s) 45, 208, 480, 577, 699, 918
GsuI CTGGAG 1 cut(s) 70
HaeII RGCGCY 1 cut(s) 988
HaeIII GGCC 6 cut(s) 210, 428, 570, 585, 920, 1046
HapII CCGG 5 cut(s) 99, 204, 498, 546, 830
HhaI GCGC 1 cut(s) 987
Hin1II CATG 6 cut(s) 215, 557, 715, 785, 850, 982
Hin6I GCGC 1 cut(s) 985
HinP1I GCGC 1 cut(s) 985
HindIII AAGCTT 1 cut(s) 788
HinfI GANTC 2 cut(s) 53, 686
HpaII CCGG 5 cut(s) 99, 204, 498, 546, 830
HphI GGTGA 4 cut(s) 236, 607, 631, 637
Hpy166II GTNNAC 1 cut(s) 806
Hpy188I TCNGA 3 cut(s) 151, 415, 1007
Hpy188III TCNNGA 4 cut(s) 8, 87, 166, 821
Hpy8I GTNNAC 1 cut(s) 806
Hpy99I CGWCG 2 cut(s) 389, 593
HpyAV CCTTC 7 cut(s) 22, 84, 85, 164, 616, 846, 883
HpyCH4III ACNGT 5 cut(s) 134, 371, 631, 733, 1013
HpyCH4IV ACGT 4 cut(s) 111, 116, 365, 588
HpyCH4V TGCA 4 cut(s) 47, 553, 740, 806
HpyF10VI GCNNNNNNNGC 4 cut(s) 550, 576, 582, 823
HpyF3I CTNAG 3 cut(s) 292, 580, 648
HpySE526I ACGT 4 cut(s) 111, 116, 365, 588
Hsp92II CATG 6 cut(s) 215, 557, 715, 785, 850, 982
HspAI GCGC 1 cut(s) 985
KpnI GGTACC 1 cut(s) 711
Ksp22I TGATCA 1 cut(s) 633
Kzo9I GATC 4 cut(s) 633, 720, 906, 942
LmnI GCTCC 6 cut(s) 185, 243, 299, 487, 680, 982
Lsp1109I GCAGC 3 cut(s) 31, 466, 685
LweI GCATC 2 cut(s) 278, 459
MaeI CTAG 2 cut(s) 536, 572
MaeII ACGT 4 cut(s) 111, 116, 365, 588
MaeIII GTNAC 4 cut(s) 112, 229, 407, 625
MalI GATC 4 cut(s) 635, 722, 908, 944
MboI GATC 4 cut(s) 633, 720, 906, 942
MboII GAAGA 1 cut(s) 868
MfeI CAATTG 1 cut(s) 957
MhlI GDGCHC 2 cut(s) 182, 808
MluCI AATT 2 cut(s) 257, 957
MlyI GAGTC 1 cut(s) 680
MmeI TCCRAC 2 cut(s) 247, 265
Mph1103I ATGCAT 1 cut(s) 555
MseI TTAA 2 cut(s) 669, 1054
MslI CAYNNNNRTG 4 cut(s) 37, 422, 490, 558
MspI CCGG 5 cut(s) 99, 204, 498, 546, 830
MspR9I CCNGG 3 cut(s) 204, 499, 546
MunI CAATTG 1 cut(s) 957
Mva1269I GAATGC 1 cut(s) 555
MvnI CGCG 1 cut(s) 593
MwoI GCNNNNNNNGC 4 cut(s) 550, 576, 582, 823
NciI CCSGG 3 cut(s) 204, 499, 546
NcoI CCATGG 2 cut(s) 711, 978
NdeII GATC 4 cut(s) 633, 720, 906, 942
NlaIII CATG 6 cut(s) 215, 557, 715, 785, 850, 982
NlaIV GGNNCC 5 cut(s) 181, 201, 373, 391, 709
NmuCI GTSAC 2 cut(s) 112, 625
NsiI ATGCAT 1 cut(s) 555
NspI RCATGY 1 cut(s) 557
PctI GAATGC 1 cut(s) 555
PfeI GAWTC 1 cut(s) 53
Pfl23II CGTACG 1 cut(s) 366
PflFI GACNNNGTC 1 cut(s) 275
PkrI GCNGC 6 cut(s) 46, 209, 481, 578, 700, 919
PleI GAGTC 1 cut(s) 680
PpsI GAGTC 1 cut(s) 680
Ppu21I YACGTR 1 cut(s) 366
PspLI CGTACG 1 cut(s) 366
PspN4I GGNNCC 5 cut(s) 181, 201, 373, 391, 709
PspPI GGNCC 1 cut(s) 151
PstNI CAGNNNCTG 1 cut(s) 737
PsyI GACNNNGTC 1 cut(s) 275
RsaI GTAC 6 cut(s) 131, 325, 368, 380, 640, 709
RsaNI GTAC 6 cut(s) 130, 324, 367, 379, 639, 708
RseI CAYNNNNRTG 4 cut(s) 37, 422, 490, 558
SaqAI TTAA 2 cut(s) 669, 1054
SatI GCNGC 6 cut(s) 45, 208, 480, 577, 699, 918
Sau3AI GATC 4 cut(s) 633, 720, 906, 942
Sau96I GGNCC 1 cut(s) 151
ScaI AGTACT 2 cut(s) 380, 640
SchI GAGTC 1 cut(s) 680
ScrFI CCNGG 3 cut(s) 204, 499, 546
SduI GDGCHC 2 cut(s) 182, 808
SfaNI GCATC 2 cut(s) 278, 459
SfcI CTRYAG 1 cut(s) 511
SinI GGWCC 1 cut(s) 151
SmiMI CAYNNNNRTG 4 cut(s) 37, 422, 490, 558
SmlI CTYRAG 3 cut(s) 335, 520, 821
SmoI CTYRAG 3 cut(s) 335, 520, 821
Sse9I AATT 2 cut(s) 257, 957
SsiI CCGC 5 cut(s) 207, 467, 576, 593, 917
SspMI CTAG 2 cut(s) 536, 572
StyD4I CCNGG 3 cut(s) 202, 497, 544
StyI CCWWGG 5 cut(s) 571, 606, 676, 711, 978
TaaI ACNGT 5 cut(s) 134, 371, 631, 733, 1013
TaiI ACGT 4 cut(s) 114, 119, 368, 591
TaqI TCGA 2 cut(s) 909, 945
TasI AATT 2 cut(s) 257, 957
TatI WGTACW 3 cut(s) 129, 378, 638
TauI GCSGC 3 cut(s) 210, 579, 920
TfiI GAWTC 1 cut(s) 53
Tru1I TTAA 2 cut(s) 669, 1054
Tru9I TTAA 2 cut(s) 669, 1054
TscAI CASTG 1 cut(s) 636
TseFI GTSAC 2 cut(s) 112, 625
TseI GCWGC 3 cut(s) 44, 479, 698
Tsp45I GTSAC 2 cut(s) 112, 625
TspDTI ATGAA 5 cut(s) 45, 186, 430, 447, 902
TspGWI ACGGA 3 cut(s) 68, 248, 402
TspRI CASTG 1 cut(s) 636
Tth111I GACNNNGTC 1 cut(s) 275
VneI GTGCAC 1 cut(s) 804
VpaK11BI GGWCC 1 cut(s) 151
XapI RAATTY 1 cut(s) 257
XceI RCATGY 1 cut(s) 557
XcmI CCANNNNNNNNNTGG 2 cut(s) 218, 709
XmaJI CCTAGG 1 cut(s) 571
XspI CTAG 2 cut(s) 536, 572
ZrmI AGTACT 2 cut(s) 380, 640
Zsp2I ATGCAT 1 cut(s) 555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.