RchiOBHm_Chr2g0110531

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000167
Physical Location & Seq
Forward (+)
22094821 .. 22096704
1884 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48419

Sequence Viewer

Length: 1224 bp
ATGTCCTCTAATCCTCTCCATATATATAATGCATATTGCAATTGTCACCCTCACACAATCACTCACGGATCACTACTCTCATACCAACTAGTAAGTGCTGTCATTACCAGCTTCTACTACAGAGAGAAAATGGCCAAAGCTCCGGAGCATGAACACCCCAAGAAGGCCTTTGGATGGGCTGCCAGAGATTCATCTGGCCTTCTATCTCCCTTCAGTTTCTCAAGAAGGGAAACGGGAGAGAAGGACGTCACATTCAAAGTATTGTACTGCGGGATTTGTCATTCGGATCTTTCATTGGTCAAGAATGAATGGGAGTCTAATCAATGGGCTTCCGCATATCCGATGGTTCCCGGGCATGAGATTGTTGGTGAAGTGACAGAGGTAGGGAGCAAAGTGCAAAAATTCAACGTTGGAGACAGAGTTGGTGTTGGATGCATGGTGGGATCTTGTCAATCTTGTGATAGTTGTGCCAACGCCCTTGAGAATTACTGCTCTAAATGGATACCCACATACGGTGCCATGTACCACGACGGAACCACTACTTACGGAGGTTACAGTGACATCATGGTGGCCGATGAGCACTTTGTAGTTCGTATTCCTGACAACCTGCCTATGGATGGTGCTGCGCCGCTTCTATGTGCCGGGATTACAACTTACAGTCCCTTGAGATATTTCGGACTTGACAAACCCGGAATGCATGTGGGCGTTGTTGGCCTTGGTGGTCTAGGTCACGTTGCTGTGAAGTTTGCGAAGGCTATGGGAGTCAAGGTTACGGTGATCAGTACGTCCACTAACAAGAAGGAGGAAGCTCTTGAGCACCTTGGTGCCGATTCATTTTTGGTCAGTCGTGACCAAGATCAAATGCAGGCCGCCATGGGTACAATGGACGGTATCATTGACACTGTCTCTGCAAACCACCCTCTCCTGCCATTCATTGGTTTGTTGAAGTCTCAGGGAAAGCTCATAATGGTCGGTGCACCAGACAAGCCTGCTGAGCTTCCAGTTTTTCCTTTGCTCATGGGAAGGAAGTTGGTCGCTGGTTCTTGCAACGGGAGCATGAAGGAGACACAACAGATGATTGATTTTGCGGCCAAACACAACATAACTGCCGATATTGAGGTCATCCCGATTGATTATTTGAACACTGCTATGGAACGCCTTGCAAAAGCTGACGTCAGATATCGATTTGTCATCGACATCGGCAACACATTGAAGTCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

407

Amino Acids

44.3

Weight (kDa)

6.31

Isoelectric Point (pI)

28.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 79 - 201 2e-26 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 241 - 364 1.3e-21 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 249, 1176
Acc36I ACCTGC 1 cut(s) 615
AccB1I GGYRCC 2 cut(s) 515, 824
AccB7I CCANNNNNTGG 1 cut(s) 935
AccIII TCCGGA 1 cut(s) 142
AciI CCGC 5 cut(s) 270, 333, 629, 870, 1088
AclI AACGTT 1 cut(s) 408
AclWI GGATC 3 cut(s) 76, 294, 451
AcoI YGGCCR 3 cut(s) 132, 570, 1089
AcsI RAATTY 1 cut(s) 401
AcuI CTGAAG 1 cut(s) 196
AcyI GRCGYC 2 cut(s) 246, 1173
AfaI GTAC 4 cut(s) 266, 524, 784, 880
AfiI CCNNNNNNNGG 6 cut(s) 163, 174, 512, 613, 617, 935
AgsI TTSAA 5 cut(s) 256, 406, 946, 1141, 1213
AhlI ACTAGT 1 cut(s) 88
AleI CACNNNNGTG 1 cut(s) 822
AluBI AGCT 6 cut(s) 111, 140, 809, 961, 997, 1169
AluI AGCT 6 cut(s) 111, 140, 809, 961, 997, 1169
Alw21I GWGCWC 3 cut(s) 582, 819, 979
Alw26I GTCTC 4 cut(s) 408, 910, 954, 1058
Alw44I GTGCAC 1 cut(s) 975
AlwI GGATC 3 cut(s) 76, 294, 451
Ama87I CYCGRG 1 cut(s) 350
Aor13HI TCCGGA 1 cut(s) 142
AoxI GGCC 7 cut(s) 132, 165, 196, 570, 712, 867, 1089
ApaLI GTGCAC 1 cut(s) 975
ApeKI GCWGC 2 cut(s) 179, 623
ApoI RAATTY 1 cut(s) 401
AspLEI GCGC 1 cut(s) 628
AsuC2I CCSGG 4 cut(s) 351, 352, 643, 690
AsuHPI GGTGA 3 cut(s) 38, 380, 787
AvaI CYCGRG 1 cut(s) 350
BaeGI GKGCMC 1 cut(s) 979
BalI TGGCCA 1 cut(s) 134
BanI GGYRCC 2 cut(s) 515, 824
Bbv12I GWGCWC 3 cut(s) 582, 819, 979
BbvI GCAGC 2 cut(s) 166, 610
BccI CCATC 3 cut(s) 168, 337, 611
BciVI GTATCC 1 cut(s) 495
BclI TGATCA 1 cut(s) 777
BcnI CCSGG 4 cut(s) 351, 352, 643, 690
BcoDI GTCTC 4 cut(s) 408, 910, 954, 1058
BcuI ACTAGT 1 cut(s) 88
BfaI CTAG 2 cut(s) 89, 725
BfmI CTRYAG 1 cut(s) 118
BfuAI ACCTGC 1 cut(s) 615
BfuI GTATCC 1 cut(s) 495
BisI GCNGC 5 cut(s) 180, 624, 629, 870, 1089
BlpI GCTNAGC 1 cut(s) 993
BlsI GCNGC 5 cut(s) 181, 625, 630, 871, 1090
Bme1390I CCNGG 4 cut(s) 351, 352, 643, 690
BmeT110I CYCGRG 1 cut(s) 350
BmiI GGNNCC 4 cut(s) 348, 517, 535, 826
BmrFI CCNGG 4 cut(s) 351, 352, 643, 690
BmsI GCATC 1 cut(s) 422
Bpu1102I GCTNAGC 1 cut(s) 993
BpuEI CTTGAG 4 cut(s) 205, 500, 685, 833
BpuMI CCSGG 4 cut(s) 351, 352, 643, 690
Bsa29I ATCGAT 1 cut(s) 1183
BsaHI GRCGYC 2 cut(s) 246, 1173
BsaJI CCNNGG 4 cut(s) 350, 715, 820, 873
BsaWI WCCGGW 1 cut(s) 142
BsaXI ACNNNNNCTCC 4 cut(s) 405, 435, 753, 783
Bsc4I CCNNNNNNNGG 6 cut(s) 163, 174, 512, 613, 617, 935
Bse1I ACTGG 1 cut(s) 1001
BseAI TCCGGA 1 cut(s) 142
BseCI ATCGAT 1 cut(s) 1183
BseDI CCNNGG 4 cut(s) 350, 715, 820, 873
BseGI GGATG 4 cut(s) 179, 437, 622, 1122
BseLI CCNNNNNNNGG 6 cut(s) 163, 174, 512, 613, 617, 935
BseMII CTCAG 2 cut(s) 965, 984
BseNI ACTGG 1 cut(s) 1001
BseSI GKGCMC 1 cut(s) 979
BseXI GCAGC 2 cut(s) 166, 610
BshFI GGCC 7 cut(s) 134, 167, 198, 572, 714, 869, 1091
BshNI GGYRCC 2 cut(s) 515, 824
BshVI ATCGAT 1 cut(s) 1183
BsiHKAI GWGCWC 3 cut(s) 582, 819, 979
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 4 cut(s) 143, 351, 642, 690
BslFI GGGAC 1 cut(s) 645
BslI CCNNNNNNNGG 6 cut(s) 163, 174, 512, 613, 617, 935
BsmAI GTCTC 4 cut(s) 408, 910, 954, 1058
BsmFI GGGAC 1 cut(s) 645
BsmI GAATGC 1 cut(s) 699
BsnI GGCC 7 cut(s) 134, 167, 198, 572, 714, 869, 1091
BsoBI CYCGRG 1 cut(s) 350
Bsp1286I GDGCHC 3 cut(s) 582, 819, 979
Bsp13I TCCGGA 1 cut(s) 142
Bsp143I GATC 5 cut(s) 68, 286, 443, 777, 856
Bsp1720I GCTNAGC 1 cut(s) 993
Bsp19I CCATGG 1 cut(s) 873
BspACI CCGC 5 cut(s) 270, 333, 629, 870, 1088
BspANI GGCC 7 cut(s) 134, 167, 198, 572, 714, 869, 1091
BspCNI CTCAG 2 cut(s) 964, 985
BspDI ATCGAT 1 cut(s) 1183
BspEI TCCGGA 1 cut(s) 142
BspLI GGNNCC 4 cut(s) 348, 517, 535, 826
BspMI ACCTGC 1 cut(s) 615
BspPI GGATC 3 cut(s) 76, 294, 451
BspT107I GGYRCC 2 cut(s) 515, 824
BsrI ACTGG 1 cut(s) 1001
BssECI CCNNGG 4 cut(s) 350, 715, 820, 873
BssMI GATC 5 cut(s) 68, 286, 443, 777, 856
BssNI GRCGYC 2 cut(s) 246, 1173
BssT1I CCWWGG 3 cut(s) 715, 820, 873
Bst4CI ACNGT 6 cut(s) 515, 557, 659, 775, 890, 904
BstACI GRCGYC 2 cut(s) 246, 1173
BstC8I GCNNGC 2 cut(s) 867, 990
BstDEI CTNAG 2 cut(s) 951, 993
BstDSI CCRYGG 1 cut(s) 873
BstF5I GGATG 4 cut(s) 179, 437, 622, 1122
BstHHI GCGC 1 cut(s) 628
BstKTI GATC 5 cut(s) 71, 289, 446, 780, 859
BstMAI GTCTC 4 cut(s) 408, 910, 954, 1058
BstMBI GATC 5 cut(s) 68, 286, 443, 777, 856
BstMWI GCNNNNNNNGC 3 cut(s) 711, 994, 1053
BstNSI RCATGY 1 cut(s) 701
BstSCI CCNGG 4 cut(s) 349, 350, 641, 688
BstSFI CTRYAG 1 cut(s) 118
BstSLI GKGCMC 1 cut(s) 979
BstV1I GCAGC 2 cut(s) 166, 610
BstX2I RGATCY 2 cut(s) 286, 443
BstYI RGATCY 2 cut(s) 286, 443
Bsu15I ATCGAT 1 cut(s) 1183
BsuI GTATCC 1 cut(s) 495
BsuRI GGCC 7 cut(s) 134, 167, 198, 572, 714, 869, 1091
BsuTUI ATCGAT 1 cut(s) 1183
BtgI CCRYGG 1 cut(s) 873
BtsCI GGATG 4 cut(s) 179, 437, 622, 1122
BtsI GCAGTG 1 cut(s) 1143
BtsIMutI CAGTG 3 cut(s) 562, 900, 1143
BveI ACCTGC 1 cut(s) 615
Cac8I GCNNGC 2 cut(s) 867, 990
CfoI GCGC 1 cut(s) 628
Cfr9I CCCGGG 1 cut(s) 350
ClaI ATCGAT 1 cut(s) 1183
Csp6I GTAC 4 cut(s) 265, 523, 783, 879
CviAII CATG 9 cut(s) 149, 356, 436, 520, 565, 698, 874, 1018, 1057
CviQI GTAC 4 cut(s) 265, 523, 783, 879
DdeI CTNAG 2 cut(s) 951, 993
DpnI GATC 5 cut(s) 70, 288, 445, 779, 858
DpnII GATC 5 cut(s) 68, 286, 443, 777, 856
EaeI YGGCCR 3 cut(s) 132, 570, 1089
Eco130I CCWWGG 3 cut(s) 715, 820, 873
Eco147I AGGCCT 1 cut(s) 167
Eco32I GATATC 1 cut(s) 1181
Eco57I CTGAAG 1 cut(s) 196
Eco88I CYCGRG 1 cut(s) 350
EcoRV GATATC 1 cut(s) 1181
EcoT14I CCWWGG 3 cut(s) 715, 820, 873
EcoT22I ATGCAT 3 cut(s) 34, 437, 699
ErhI CCWWGG 3 cut(s) 715, 820, 873
FaeI CATG 9 cut(s) 152, 359, 439, 523, 568, 701, 877, 1021, 1060
FalI AAGNNNNNCTT 2 cut(s) 152, 184
FaqI GGGAC 1 cut(s) 645
FatI CATG 9 cut(s) 148, 355, 435, 519, 564, 697, 873, 1017, 1056
FauI CCCGC 1 cut(s) 263
FbaI TGATCA 1 cut(s) 777
Fnu4HI GCNGC 5 cut(s) 180, 624, 629, 870, 1089
FokI GGATG 4 cut(s) 186, 444, 629, 1109
Fsp4HI GCNGC 5 cut(s) 180, 624, 629, 870, 1089
FspBI CTAG 2 cut(s) 89, 725
GlaI GCGC 1 cut(s) 627
GluI GCNGC 5 cut(s) 180, 624, 629, 870, 1089
HaeIII GGCC 7 cut(s) 134, 167, 198, 572, 714, 869, 1091
HapII CCGG 4 cut(s) 143, 351, 642, 690
HhaI GCGC 1 cut(s) 628
Hin1I GRCGYC 2 cut(s) 246, 1173
Hin1II CATG 9 cut(s) 152, 359, 439, 523, 568, 701, 877, 1021, 1060
Hin6I GCGC 1 cut(s) 626
HinP1I GCGC 1 cut(s) 626
HinfI GANTC 4 cut(s) 188, 314, 762, 830
HpaII CCGG 4 cut(s) 143, 351, 642, 690
HphI GGTGA 3 cut(s) 38, 380, 787
Hpy166II GTNNAC 2 cut(s) 789, 977
Hpy188I TCNGA 4 cut(s) 286, 342, 677, 1178
Hpy188III TCNNGA 7 cut(s) 143, 222, 301, 599, 812, 848, 1126
Hpy8I GTNNAC 2 cut(s) 789, 977
Hpy99I CGWCG 1 cut(s) 533
HpyAV CCTTC 9 cut(s) 157, 209, 219, 220, 235, 745, 793, 1017, 1054
HpyCH4III ACNGT 6 cut(s) 515, 557, 659, 775, 890, 904
HpyCH4IV ACGT 5 cut(s) 246, 408, 732, 785, 1173
HpyF10VI GCNNNNNNNGC 3 cut(s) 711, 994, 1053
HpyF3I CTNAG 2 cut(s) 951, 993
HpySE526I ACGT 5 cut(s) 246, 408, 732, 785, 1173
Hsp92I GRCGYC 2 cut(s) 246, 1173
Hsp92II CATG 9 cut(s) 152, 359, 439, 523, 568, 701, 877, 1021, 1060
HspAI GCGC 1 cut(s) 626
Kpn2I TCCGGA 1 cut(s) 142
Ksp22I TGATCA 1 cut(s) 777
Kzo9I GATC 5 cut(s) 68, 286, 443, 777, 856
LmnI GCTCC 4 cut(s) 145, 145, 387, 1053
Lsp1109I GCAGC 2 cut(s) 166, 610
LweI GCATC 1 cut(s) 422
MaeI CTAG 2 cut(s) 89, 725
MaeII ACGT 5 cut(s) 246, 408, 732, 785, 1173
MaeIII GTNAC 8 cut(s) 44, 247, 373, 551, 557, 728, 769, 848
MalI GATC 5 cut(s) 70, 288, 445, 779, 858
MboI GATC 5 cut(s) 68, 286, 443, 777, 856
MfeI CAATTG 1 cut(s) 40
MflI RGATCY 2 cut(s) 286, 443
MhlI GDGCHC 3 cut(s) 582, 819, 979
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 3 cut(s) 40, 401, 484
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 2 cut(s) 323, 771
MmeI TCCRAC 2 cut(s) 391, 409
MnlI CCTC 8 cut(s) 16, 24, 60, 373, 542, 796, 930, 1111
Mox20I TGGCCA 1 cut(s) 134
Mph1103I ATGCAT 3 cut(s) 34, 437, 699
MroI TCCGGA 1 cut(s) 142
MscI TGGCCA 1 cut(s) 134
MseI TTAA 1 cut(s) 1222
MslI CAYNNNNRTG 3 cut(s) 566, 822, 1148
Msp20I TGGCCA 1 cut(s) 134
MspI CCGG 4 cut(s) 143, 351, 642, 690
MspR9I CCNGG 4 cut(s) 351, 352, 643, 690
MunI CAATTG 1 cut(s) 40
Mva1269I GAATGC 1 cut(s) 699
MwoI GCNNNNNNNGC 3 cut(s) 711, 994, 1053
NciI CCSGG 4 cut(s) 351, 352, 643, 690
NcoI CCATGG 1 cut(s) 873
NdeII GATC 5 cut(s) 68, 286, 443, 777, 856
NlaIII CATG 9 cut(s) 152, 359, 439, 523, 568, 701, 877, 1021, 1060
NlaIV GGNNCC 4 cut(s) 348, 517, 535, 826
NmuCI GTSAC 6 cut(s) 44, 247, 373, 557, 728, 848
NsiI ATGCAT 3 cut(s) 34, 437, 699
NspI RCATGY 1 cut(s) 701
OliI CACNNNNGTG 1 cut(s) 822
PceI AGGCCT 1 cut(s) 167
PctI GAATGC 1 cut(s) 699
PfeI GAWTC 2 cut(s) 188, 830
PflFI GACNNNGTC 1 cut(s) 902
PflMI CCANNNNNTGG 1 cut(s) 935
PkrI GCNGC 5 cut(s) 181, 625, 630, 871, 1090
PleI GAGTC 2 cut(s) 322, 770
PpsI GAGTC 2 cut(s) 322, 770
Psp1406I AACGTT 1 cut(s) 408
PspN4I GGNNCC 4 cut(s) 348, 517, 535, 826
PsuI RGATCY 2 cut(s) 286, 443
PsyI GACNNNGTC 1 cut(s) 902
RsaI GTAC 4 cut(s) 266, 524, 784, 880
RsaNI GTAC 4 cut(s) 265, 523, 783, 879
RseI CAYNNNNRTG 3 cut(s) 566, 822, 1148
SaqAI TTAA 1 cut(s) 1222
SatI GCNGC 5 cut(s) 180, 624, 629, 870, 1089
Sau3AI GATC 5 cut(s) 68, 286, 443, 777, 856
SchI GAGTC 2 cut(s) 323, 771
ScrFI CCNGG 4 cut(s) 351, 352, 643, 690
SduI GDGCHC 3 cut(s) 582, 819, 979
SfaNI GCATC 1 cut(s) 422
SfcI CTRYAG 1 cut(s) 118
SmaI CCCGGG 1 cut(s) 352
SmiMI CAYNNNNRTG 3 cut(s) 566, 822, 1148
SmlI CTYRAG 4 cut(s) 220, 479, 664, 812
SmoI CTYRAG 4 cut(s) 220, 479, 664, 812
SpeI ACTAGT 1 cut(s) 88
Sse9I AATT 3 cut(s) 40, 401, 484
SseBI AGGCCT 1 cut(s) 167
SsiI CCGC 5 cut(s) 270, 333, 629, 870, 1088
SspMI CTAG 2 cut(s) 89, 725
StuI AGGCCT 1 cut(s) 167
StyD4I CCNGG 4 cut(s) 349, 350, 641, 688
StyI CCWWGG 3 cut(s) 715, 820, 873
TaaI ACNGT 6 cut(s) 515, 557, 659, 775, 890, 904
TaiI ACGT 5 cut(s) 249, 411, 735, 788, 1176
TaqI TCGA 2 cut(s) 1183, 1194
TasI AATT 3 cut(s) 40, 401, 484
TatI WGTACW 1 cut(s) 264
TauI GCSGC 3 cut(s) 631, 872, 1091
TfiI GAWTC 2 cut(s) 188, 830
Tru1I TTAA 1 cut(s) 1222
Tru9I TTAA 1 cut(s) 1222
TscAI CASTG 3 cut(s) 562, 907, 1150
TseFI GTSAC 6 cut(s) 44, 247, 373, 557, 728, 848
TseI GCWGC 2 cut(s) 179, 623
Tsp45I GTSAC 6 cut(s) 44, 247, 373, 557, 728, 848
TspDTI ATGAA 7 cut(s) 165, 180, 282, 321, 822, 922, 1073
TspGWI ACGGA 3 cut(s) 81, 546, 561
TspMI CCCGGG 1 cut(s) 350
TspRI CASTG 3 cut(s) 562, 907, 1150
Tth111I GACNNNGTC 1 cut(s) 902
Van91I CCANNNNNTGG 1 cut(s) 935
VneI GTGCAC 1 cut(s) 975
XapI RAATTY 1 cut(s) 401
XceI RCATGY 1 cut(s) 701
XcmI CCANNNNNNNNNTGG 1 cut(s) 880
XmaI CCCGGG 1 cut(s) 350
XspI CTAG 2 cut(s) 89, 725
ZraI GACGTC 2 cut(s) 247, 1174
Zsp2I ATGCAT 3 cut(s) 34, 437, 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.