RLG00000017825

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000167
Physical Location & Seq
Forward (+)
21747732 .. 21749226
1495 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017825

Sequence Viewer

Length: 1065 bp
ATGTCTAACGAGCAAAAACACTCCAGGAAGGCATTTGGATGGGCTGCAAGAGATTCATCTGGTGTTCTCTCTCCCTTCAGTTTCTCCAGAAGAGACGTGACATTCAAAGTGTTGTACTGTGGGATTTGCCATTCGGACCTTCACATGGTCAAGAATGAATGGGGCTCCTCTACCTATCCTCTGGTTCCCGGGCATGAGATTGTCGGTGAAGTGATAGAAGTAGGGAGCAATGTACAAAAATTCAAAGTTGGAGACAAAGTCGGTGTTGGAGGCATAGTGGGAGCTTGCCGATCTTGTGATAGCTGTACCGACCATCTTGAGAACTACTGCCCCAAACTAATACTCACGTACAGTGCCAAGTACTATGACGGAACCACCACCTATGGCGGTTACTCTGACATTATGGTTGCAGATGAACACTTCGTTGTCCGTATCCCGGACAACCTACCCCTTGATTGTGCTGCTCCTCTCCTATGTGCCGGAATCACAACCTACAGCCCGTTGAGATATTTTGGACTTGACAAGCCCGGCATGCATGTGGGCGTGGTTGGCCTAGGTGGTTTAGGCCACGTCGCAATGAAGTTTGCCAAGGCAATGGGAGTGAAGGTTACAGTGATCAGTACGTCCCCTAATAAGAAAGAGGAAGCAGTTAAACCCCTAGGAGCTGATTCGTTTTTGGTTAGCCGTGACCAAGATCAAATGCAGGCTGCCATTGGTACCATGGATGGCATCATTGACACAATTTCTGCACAACATCCTCTCTTGCCTTTGATTGATCTGTTGAAGTCTCATGGAAAGCTTGTTATTGTTGGTGCACCAGAAAAGCCTCTTGAGCTTCCGGTTTTTCCTTTACTCACGGGAAGGAAGATGGTAGCTAGTAGCAGCGGTGGAGGTATGAAGGAGACACAAGAGATGATCGATTTTGCAGCCAAGCACAACGTAACAGCAGACATCGAGGTTATCCCAATTGACTACTTGAACACTGCCATGGAGTGCCTTGCCAAAGCAGACGTCAGATACCGTTTTGTCATTGACATTGGAAACACACTGAAGGCTAGCTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

355

Amino Acids

38.18

Weight (kDa)

6.41

Isoelectric Point (pI)

34.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 31 - 147 3.4e-27 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N PF00107 187 - 310 7.7e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1014
Acc65I GGTACC 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 716
AciI CCGC 2 cut(s) 387, 885
AcsI RAATTY 1 cut(s) 239
AcuI CTGAAG 1 cut(s) 61
AcyI GRCGYC 1 cut(s) 1011
AfaI GTAC 7 cut(s) 116, 234, 307, 350, 362, 622, 718
AfiI CCNNNNNNNGG 2 cut(s) 145, 436
AgsI TTSAA 4 cut(s) 106, 244, 784, 979
AjiI CACGTC 2 cut(s) 97, 571
AjnI CCWGG 1 cut(s) 23
AluBI AGCT 7 cut(s) 284, 303, 665, 799, 835, 875, 1059
AluI AGCT 7 cut(s) 284, 303, 665, 799, 835, 875, 1059
Alw21I GWGCWC 1 cut(s) 817
Alw26I GTCTC 4 cut(s) 87, 246, 792, 896
Alw44I GTGCAC 1 cut(s) 813
Ama87I CYCGRG 1 cut(s) 188
AoxI GGCC 2 cut(s) 550, 565
ApaLI GTGCAC 1 cut(s) 813
ApeKI GCWGC 5 cut(s) 44, 461, 707, 882, 926
ApoI RAATTY 1 cut(s) 239
ArsI GACNNNNNNTTYG 2 cut(s) 996, 1028
Asp718I GGTACC 1 cut(s) 716
AspA2I CCTAGG 2 cut(s) 553, 658
AspS9I GGNCC 1 cut(s) 136
AsuC2I CCSGG 4 cut(s) 189, 190, 437, 528
AsuHPI GGTGA 1 cut(s) 218
AsuNHI GCTAGC 1 cut(s) 1055
AvaI CYCGRG 1 cut(s) 188
AvaII GGWCC 1 cut(s) 136
AvrII CCTAGG 2 cut(s) 553, 658
BaeGI GKGCMC 1 cut(s) 817
BanI GGYRCC 1 cut(s) 716
BanII GRGCYC 1 cut(s) 167
Bbv12I GWGCWC 1 cut(s) 817
BbvI GCAGC 5 cut(s) 31, 448, 694, 894, 938
BccI CCATC 4 cut(s) 33, 321, 719, 862
BceAI ACGGC 1 cut(s) 669
BciT130I CCWGG 1 cut(s) 25
BciVI GTATCC 1 cut(s) 443
BclI TGATCA 1 cut(s) 615
BcnI CCSGG 4 cut(s) 189, 190, 437, 528
BcoDI GTCTC 4 cut(s) 87, 246, 792, 896
BfaI CTAG 4 cut(s) 554, 659, 876, 1056
BfmI CTRYAG 1 cut(s) 493
BfuI GTATCC 1 cut(s) 443
BisI GCNGC 5 cut(s) 45, 462, 708, 883, 927
BlnI CCTAGG 2 cut(s) 553, 658
BlsI GCNGC 5 cut(s) 46, 463, 709, 884, 928
BmcAI AGTACT 1 cut(s) 362
Bme1390I CCNGG 5 cut(s) 25, 189, 190, 437, 528
Bme18I GGWCC 1 cut(s) 136
BmeT110I CYCGRG 1 cut(s) 188
BmgBI CACGTC 2 cut(s) 97, 571
BmgT120I GGNCC 1 cut(s) 136
BmiI GGNNCC 4 cut(s) 166, 186, 373, 718
BmrFI CCNGG 5 cut(s) 25, 189, 190, 437, 528
BmsI GCATC 1 cut(s) 738
BmtI GCTAGC 1 cut(s) 1059
BpmI CTGGAG 2 cut(s) 7, 70
BpuEI CTTGAG 2 cut(s) 338, 851
BpuMI CCSGG 4 cut(s) 189, 190, 437, 528
Bsa29I ATCGAT 1 cut(s) 918
BsaAI YACGTR 1 cut(s) 348
BsaHI GRCGYC 1 cut(s) 1011
BsaJI CCNNGG 6 cut(s) 188, 553, 588, 658, 720, 987
BsaWI WCCGGW 1 cut(s) 838
BsaXI ACNNNNNCTCC 6 cut(s) 243, 261, 273, 291, 591, 621
Bsc4I CCNNNNNNNGG 2 cut(s) 145, 436
Bse3DI GCAATG 3 cut(s) 235, 582, 600
BseBI CCWGG 1 cut(s) 25
BseCI ATCGAT 1 cut(s) 918
BseDI CCNNGG 6 cut(s) 188, 553, 588, 658, 720, 987
BseGI GGATG 3 cut(s) 44, 730, 754
BseLI CCNNNNNNNGG 2 cut(s) 145, 436
BseMI GCAATG 3 cut(s) 235, 582, 600
BseRI GAGGAG 2 cut(s) 157, 456
BseSI GKGCMC 1 cut(s) 817
BseXI GCAGC 5 cut(s) 31, 448, 694, 894, 938
BsgI GTGCAG 1 cut(s) 732
BshFI GGCC 2 cut(s) 552, 567
BshNI GGYRCC 1 cut(s) 716
BshVI ATCGAT 1 cut(s) 918
BsiHKAI GWGCWC 1 cut(s) 817
BsiHKCI CYCGRG 1 cut(s) 188
BsiSI CCGG 5 cut(s) 189, 437, 480, 528, 839
BslFI GGGAC 1 cut(s) 610
BslI CCNNNNNNNGG 2 cut(s) 145, 436
BsmAI GTCTC 4 cut(s) 87, 246, 792, 896
BsmBI CGTCTC 1 cut(s) 87
BsmFI GGGAC 1 cut(s) 610
BsnI GGCC 2 cut(s) 552, 567
BsoBI CYCGRG 1 cut(s) 188
Bsp1286I GDGCHC 2 cut(s) 167, 817
Bsp1407I TGTACA 1 cut(s) 232
Bsp143I GATC 5 cut(s) 290, 615, 694, 775, 915
Bsp19I CCATGG 2 cut(s) 720, 987
BspACI CCGC 2 cut(s) 387, 885
BspANI GGCC 2 cut(s) 552, 567
BspDI ATCGAT 1 cut(s) 918
BspLI GGNNCC 4 cut(s) 166, 186, 373, 718
BspOI GCTAGC 1 cut(s) 1059
BspT107I GGYRCC 1 cut(s) 716
BsrDI GCAATG 3 cut(s) 235, 582, 600
BsrGI TGTACA 1 cut(s) 232
BssECI CCNNGG 6 cut(s) 188, 553, 588, 658, 720, 987
BssMI GATC 5 cut(s) 290, 615, 694, 775, 915
BssNI GRCGYC 1 cut(s) 1011
BssT1I CCWWGG 5 cut(s) 553, 588, 658, 720, 987
Bst2UI CCWGG 1 cut(s) 25
Bst4CI ACNGT 4 cut(s) 119, 353, 613, 1022
Bst6I CTCTTC 1 cut(s) 85
BstACI GRCGYC 1 cut(s) 1011
BstAUI TGTACA 1 cut(s) 232
BstBAI YACGTR 1 cut(s) 348
BstC8I GCNNGC 4 cut(s) 286, 533, 705, 1057
BstDSI CCRYGG 2 cut(s) 720, 987
BstF5I GGATG 3 cut(s) 44, 730, 754
BstKTI GATC 5 cut(s) 293, 618, 697, 778, 918
BstMAI GTCTC 4 cut(s) 87, 246, 792, 896
BstMBI GATC 5 cut(s) 290, 615, 694, 775, 915
BstMWI GCNNNNNNNGC 3 cut(s) 532, 549, 832
BstNI CCWGG 1 cut(s) 25
BstNSI RCATGY 2 cut(s) 535, 539
BstSCI CCNGG 5 cut(s) 23, 187, 188, 435, 526
BstSFI CTRYAG 1 cut(s) 493
BstSLI GKGCMC 1 cut(s) 817
BstV1I GCAGC 5 cut(s) 31, 448, 694, 894, 938
BstXI CCANNNNNNTGG 1 cut(s) 595
Bsu15I ATCGAT 1 cut(s) 918
BsuI GTATCC 1 cut(s) 443
BsuRI GGCC 2 cut(s) 552, 567
BsuTUI ATCGAT 1 cut(s) 918
BtgI CCRYGG 2 cut(s) 720, 987
BtrI CACGTC 2 cut(s) 97, 571
BtsCI GGATG 3 cut(s) 44, 730, 754
BtsI GCAGTG 1 cut(s) 981
BtsIMutI CAGTG 4 cut(s) 358, 618, 981, 1046
Cac8I GCNNGC 4 cut(s) 286, 533, 705, 1057
Cfr13I GGNCC 1 cut(s) 136
Cfr9I CCCGGG 1 cut(s) 188
ClaI ATCGAT 1 cut(s) 918
Csp6I GTAC 7 cut(s) 115, 233, 306, 349, 361, 621, 717
CviAII CATG 7 cut(s) 145, 194, 532, 536, 721, 791, 988
CviQI GTAC 7 cut(s) 115, 233, 306, 349, 361, 621, 717
DpnI GATC 5 cut(s) 292, 617, 696, 777, 917
DpnII GATC 5 cut(s) 290, 615, 694, 775, 915
Eam1104I CTCTTC 1 cut(s) 85
EarI CTCTTC 1 cut(s) 85
Eco130I CCWWGG 5 cut(s) 553, 588, 658, 720, 987
Eco24I GRGCYC 1 cut(s) 167
Eco47I GGWCC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 61
Eco88I CYCGRG 1 cut(s) 188
EcoRII CCWGG 1 cut(s) 23
EcoT14I CCWWGG 5 cut(s) 553, 588, 658, 720, 987
EcoT22I ATGCAT 1 cut(s) 537
EcoT38I GRGCYC 1 cut(s) 167
ErhI CCWWGG 5 cut(s) 553, 588, 658, 720, 987
Esp3I CGTCTC 1 cut(s) 87
FaeI CATG 7 cut(s) 148, 197, 535, 539, 724, 794, 991
FaqI GGGAC 1 cut(s) 610
FatI CATG 7 cut(s) 144, 193, 531, 535, 720, 790, 987
FbaI TGATCA 1 cut(s) 615
Fnu4HI GCNGC 5 cut(s) 45, 462, 708, 883, 927
FokI GGATG 3 cut(s) 51, 737, 741
FriOI GRGCYC 1 cut(s) 167
Fsp4HI GCNGC 5 cut(s) 45, 462, 708, 883, 927
FspBI CTAG 4 cut(s) 554, 659, 876, 1056
GluI GCNGC 5 cut(s) 45, 462, 708, 883, 927
GsuI CTGGAG 2 cut(s) 7, 70
HaeIII GGCC 2 cut(s) 552, 567
HapII CCGG 5 cut(s) 189, 437, 480, 528, 839
Hin1I GRCGYC 1 cut(s) 1011
Hin1II CATG 7 cut(s) 148, 197, 535, 539, 724, 794, 991
HindIII AAGCTT 1 cut(s) 797
HinfI GANTC 3 cut(s) 53, 483, 668
HpaII CCGG 5 cut(s) 189, 437, 480, 528, 839
HphI GGTGA 1 cut(s) 218
Hpy166II GTNNAC 1 cut(s) 815
Hpy188I TCNGA 3 cut(s) 136, 397, 1016
Hpy188III TCNNGA 4 cut(s) 87, 151, 317, 830
Hpy8I GTNNAC 1 cut(s) 815
Hpy99I CGWCG 1 cut(s) 575
HpyAV CCTTC 7 cut(s) 22, 85, 149, 598, 855, 892, 1045
HpyCH4III ACNGT 4 cut(s) 119, 353, 613, 1022
HpyCH4IV ACGT 6 cut(s) 96, 347, 570, 623, 939, 1011
HpyCH4V TGCA 7 cut(s) 47, 410, 535, 703, 749, 815, 926
HpyF10VI GCNNNNNNNGC 3 cut(s) 532, 549, 832
HpySE526I ACGT 6 cut(s) 96, 347, 570, 623, 939, 1011
Hsp92I GRCGYC 1 cut(s) 1011
Hsp92II CATG 7 cut(s) 148, 197, 535, 539, 724, 794, 991
KpnI GGTACC 1 cut(s) 720
Ksp22I TGATCA 1 cut(s) 615
Kzo9I GATC 5 cut(s) 290, 615, 694, 775, 915
LmnI GCTCC 5 cut(s) 170, 225, 281, 469, 662
Lsp1109I GCAGC 5 cut(s) 31, 448, 694, 894, 938
LweI GCATC 1 cut(s) 738
MaeI CTAG 4 cut(s) 554, 659, 876, 1056
MaeII ACGT 6 cut(s) 96, 347, 570, 623, 939, 1011
MaeIII GTNAC 5 cut(s) 97, 389, 607, 686, 940
MalI GATC 5 cut(s) 292, 617, 696, 777, 917
MboI GATC 5 cut(s) 290, 615, 694, 775, 915
MboII GAAGA 2 cut(s) 102, 877
MfeI CAATTG 1 cut(s) 966
MhlI GDGCHC 2 cut(s) 167, 817
MluCI AATT 3 cut(s) 239, 741, 966
MmeI TCCRAC 2 cut(s) 229, 247
MnlI CCTC 9 cut(s) 178, 189, 263, 477, 634, 768, 837, 884, 949
Mph1103I ATGCAT 1 cut(s) 537
MseI TTAA 2 cut(s) 651, 1063
MslI CAYNNNNRTG 3 cut(s) 37, 536, 986
MspA1I CMGCKG 1 cut(s) 885
MspI CCGG 5 cut(s) 189, 437, 480, 528, 839
MspR9I CCNGG 5 cut(s) 25, 189, 190, 437, 528
MunI CAATTG 1 cut(s) 966
MvaI CCWGG 1 cut(s) 25
MwoI GCNNNNNNNGC 3 cut(s) 532, 549, 832
NciI CCSGG 4 cut(s) 189, 190, 437, 528
NcoI CCATGG 2 cut(s) 720, 987
NdeII GATC 5 cut(s) 290, 615, 694, 775, 915
NheI GCTAGC 1 cut(s) 1055
NlaIII CATG 7 cut(s) 148, 197, 535, 539, 724, 794, 991
NlaIV GGNNCC 4 cut(s) 166, 186, 373, 718
NmuCI GTSAC 2 cut(s) 97, 686
NsiI ATGCAT 1 cut(s) 537
NspI RCATGY 2 cut(s) 535, 539
PaeI GCATGC 1 cut(s) 535
PfeI GAWTC 3 cut(s) 53, 483, 668
PflFI GACNNNGTC 1 cut(s) 257
PfoI TCCNGGA 2 cut(s) 23, 435
PkrI GCNGC 5 cut(s) 46, 463, 709, 884, 928
Ppu21I YACGTR 1 cut(s) 348
Psp6I CCWGG 1 cut(s) 23
PspGI CCWGG 1 cut(s) 23
PspN4I GGNNCC 4 cut(s) 166, 186, 373, 718
PspPI GGNCC 1 cut(s) 136
PsyI GACNNNGTC 1 cut(s) 257
RsaI GTAC 7 cut(s) 116, 234, 307, 350, 362, 622, 718
RsaNI GTAC 7 cut(s) 115, 233, 306, 349, 361, 621, 717
RseI CAYNNNNRTG 3 cut(s) 37, 536, 986
SaqAI TTAA 2 cut(s) 651, 1063
SatI GCNGC 5 cut(s) 45, 462, 708, 883, 927
Sau3AI GATC 5 cut(s) 290, 615, 694, 775, 915
Sau96I GGNCC 1 cut(s) 136
ScaI AGTACT 1 cut(s) 362
ScrFI CCNGG 5 cut(s) 25, 189, 190, 437, 528
SduI GDGCHC 2 cut(s) 167, 817
SfaNI GCATC 1 cut(s) 738
SfcI CTRYAG 1 cut(s) 493
SinI GGWCC 1 cut(s) 136
SmaI CCCGGG 1 cut(s) 190
SmiMI CAYNNNNRTG 3 cut(s) 37, 536, 986
SmlI CTYRAG 2 cut(s) 317, 830
SmoI CTYRAG 2 cut(s) 317, 830
SphI GCATGC 1 cut(s) 535
Sse9I AATT 3 cut(s) 239, 741, 966
SsiI CCGC 2 cut(s) 387, 885
SspMI CTAG 4 cut(s) 554, 659, 876, 1056
StyD4I CCNGG 5 cut(s) 23, 187, 188, 435, 526
StyI CCWWGG 5 cut(s) 553, 588, 658, 720, 987
TaaI ACNGT 4 cut(s) 119, 353, 613, 1022
TaiI ACGT 6 cut(s) 99, 350, 573, 626, 942, 1014
TaqI TCGA 2 cut(s) 918, 954
TasI AATT 3 cut(s) 239, 741, 966
TatI WGTACW 3 cut(s) 114, 232, 360
TfiI GAWTC 3 cut(s) 53, 483, 668
Tru1I TTAA 2 cut(s) 651, 1063
Tru9I TTAA 2 cut(s) 651, 1063
TscAI CASTG 4 cut(s) 358, 618, 988, 1053
TseFI GTSAC 2 cut(s) 97, 686
TseI GCWGC 5 cut(s) 44, 461, 707, 882, 926
Tsp45I GTSAC 2 cut(s) 97, 686
TspDTI ATGAA 5 cut(s) 45, 171, 429, 593, 911
TspGWI ACGGA 2 cut(s) 384, 419
TspMI CCCGGG 1 cut(s) 188
TspRI CASTG 4 cut(s) 358, 618, 988, 1053
Tth111I GACNNNGTC 1 cut(s) 257
VneI GTGCAC 1 cut(s) 813
VpaK11BI GGWCC 1 cut(s) 136
XapI RAATTY 1 cut(s) 239
XceI RCATGY 2 cut(s) 535, 539
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XmaI CCCGGG 1 cut(s) 188
XmaJI CCTAGG 2 cut(s) 553, 658
XspI CTAG 4 cut(s) 554, 659, 876, 1056
ZraI GACGTC 1 cut(s) 1012
ZrmI AGTACT 1 cut(s) 362
Zsp2I ATGCAT 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.