Rh5BG269700

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000167
Physical Location & Seq
Reverse (-)
33637030 .. 33638520
1491 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG269700.1

Sequence Viewer

Length: 1089 bp
ATGGTGATGTCTCACGAGCAAGAACACCCCAAGAAGGCATTTGGATGGGCTGCAAGAGATTCATCTGGTGTTCTCTCTCCCTTCCGTTTCTCCAGAAGGGAAACCGGAGAGAAAGATGTGACATTCAAAGTGTTGTACTGTGGGATTTGCCATTCGGACCTTCACAATGTCAAGAATGAACACGGCTTCTCTACCTATCCTCTGGTTCCCGGCCATGAGATTGTTGGTGAAGTAACGGAAATAGGGAGCAATGTACAAAAATTCAAAGTTGGAGACAAAGTCGGTGTTGGATGCTTAGTGGGAGCTTGCCAATCTTGTGATAGTTGTACCGACCACCTTGAGAACTACTGCCCCAAAAAAATATTCACGTACTGTGGTGCCAAGTACTACGACGGAAGCACCACTTATGGCGGTTTCTCTGACATTATGGTGGCCGATGAACACTTCATAGTCCGCATCCCAGACAACCTACCACTTGATAGTGCTGCTCCACTCTTATGTGCCGGGATTACAACCTACAGCCCCTTGAGATATTTTGGACTTGACAAGCCCGGAATGCATGTGGGTGTGGTTGGCCTAGGCGGCTTAGGCCACGTCGCGGTGAAGTTTGCCAAGGCTATGGGGGTGAAGGTTACAGTGATCAGTACCTCCCCTAAGAAAGAGGAGGAAGCTATTAAACACCTTGGAGCTGACTCGTTTTTGGTTAGTCGTGACCAACATCGAATGCAGGCTGCCATTGGTACCATGGATGGGATCATTGACACGGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGGTTTGTTGAAGTCTCATGGAAAGCTTGTTATGGTTGGTGTACCAGAAAAGCCTCTTGAGCTTCCGGTTTTTCCTTTACTCACGGGAAGGAAGATGGTAGCTGGTAGCCTCATTGGAGGTATGAAGGAGACACAAGATATGATCGATTTTGCAGCCAAGCACAACATAACAGCGGACATCGAGGTTATCCCAATTGACTACTTAAACAATGCCATGGAGCGCCTTGCCAAAGCAGACGTCAGATACCGTTTTGTCATTGACATTGCAAACACACTGAAGGCTAGCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

362

Amino Acids

39.33

Weight (kDa)

6.73

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 36 - 155 8.9e-26 Alcohol dehydrogenase GroES-like domain
2-Hacid_dh_C PF02826 177 - 227 6.3e-06 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ADH_zinc_N PF00107 195 - 318 2.5e-22 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1038
Acc65I GGTACC 1 cut(s) 740
AccB1I GGYRCC 2 cut(s) 377, 740
AccII CGCG 1 cut(s) 599
AciI CCGC 5 cut(s) 411, 454, 582, 599, 971
AclWI GGATC 1 cut(s) 761
AcoI YGGCCR 2 cut(s) 211, 432
AcsI RAATTY 1 cut(s) 260
AcyI GRCGYC 1 cut(s) 1035
AfaI GTAC 8 cut(s) 137, 255, 328, 371, 386, 646, 742, 840
AfiI CCNNNNNNNGG 4 cut(s) 34, 598, 750, 797
AgsI TTSAA 3 cut(s) 127, 265, 808
AjiI CACGTC 1 cut(s) 595
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AluBI AGCT 6 cut(s) 305, 671, 689, 823, 859, 899
AluI AGCT 6 cut(s) 305, 671, 689, 823, 859, 899
Alw26I GTCTC 4 cut(s) 15, 267, 816, 920
AlwI GGATC 1 cut(s) 761
AoxI GGCC 4 cut(s) 211, 432, 574, 589
ApeKI GCWGC 4 cut(s) 50, 485, 731, 950
ApoI RAATTY 1 cut(s) 260
ArsI GACNNNNNNTTYG 2 cut(s) 1020, 1052
Asp718I GGTACC 1 cut(s) 740
AspA2I CCTAGG 1 cut(s) 577
AspLEI GCGC 1 cut(s) 1020
AspS9I GGNCC 1 cut(s) 157
AsuC2I CCSGG 3 cut(s) 210, 505, 552
AsuHPI GGTGA 4 cut(s) 16, 239, 613, 637
AsuNHI GCTAGC 1 cut(s) 1079
AvaII GGWCC 1 cut(s) 157
AvrII CCTAGG 1 cut(s) 577
BanI GGYRCC 2 cut(s) 377, 740
BauI CACGAG 1 cut(s) 14
BbvI GCAGC 4 cut(s) 37, 472, 718, 962
BccI CCATC 3 cut(s) 39, 743, 886
BceAI ACGGC 1 cut(s) 199
BclI TGATCA 1 cut(s) 639
BcnI CCSGG 3 cut(s) 210, 505, 552
BcoDI GTCTC 4 cut(s) 15, 267, 816, 920
BfaI CTAG 2 cut(s) 578, 1080
BfmI CTRYAG 1 cut(s) 517
BfoI RGCGCY 1 cut(s) 1021
BglI GCCNNNNNGGC 1 cut(s) 582
BisI GCNGC 5 cut(s) 51, 486, 583, 732, 951
BlnI CCTAGG 1 cut(s) 577
BlsI GCNGC 5 cut(s) 52, 487, 584, 733, 952
BmcAI AGTACT 1 cut(s) 386
Bme1390I CCNGG 3 cut(s) 210, 505, 552
Bme18I GGWCC 1 cut(s) 157
BmgBI CACGTC 1 cut(s) 595
BmgT120I GGNCC 1 cut(s) 157
BmiI GGNNCC 3 cut(s) 207, 379, 742
BmrFI CCNGG 3 cut(s) 210, 505, 552
BmsI GCATC 2 cut(s) 281, 465
BmtI GCTAGC 1 cut(s) 1083
BpmI CTGGAG 1 cut(s) 76
Bpu10I CCTNAGC 1 cut(s) 586
BpuEI CTTGAG 3 cut(s) 359, 547, 875
BpuMI CCSGG 3 cut(s) 210, 505, 552
Bsa29I ATCGAT 1 cut(s) 942
BsaAI YACGTR 1 cut(s) 369
BsaHI GRCGYC 1 cut(s) 1035
BsaJI CCNNGG 5 cut(s) 577, 612, 682, 744, 1011
BsaWI WCCGGW 2 cut(s) 104, 862
BsaXI ACNNNNNCTCC 2 cut(s) 264, 294
Bsc4I CCNNNNNNNGG 4 cut(s) 34, 598, 750, 797
Bse3DI GCAATG 2 cut(s) 256, 1059
BseCI ATCGAT 1 cut(s) 942
BseDI CCNNGG 5 cut(s) 577, 612, 682, 744, 1011
BseGI GGATG 5 cut(s) 50, 296, 456, 754, 778
BseLI CCNNNNNNNGG 4 cut(s) 34, 598, 750, 797
BseMI GCAATG 2 cut(s) 256, 1059
BseRI GAGGAG 1 cut(s) 677
BseXI GCAGC 4 cut(s) 37, 472, 718, 962
BsgI GTGCAG 1 cut(s) 756
Bsh1236I CGCG 1 cut(s) 599
BshFI GGCC 4 cut(s) 213, 434, 576, 591
BshNI GGYRCC 2 cut(s) 377, 740
BshVI ATCGAT 1 cut(s) 942
BsiSI CCGG 5 cut(s) 105, 210, 504, 552, 863
BslI CCNNNNNNNGG 4 cut(s) 34, 598, 750, 797
BsmAI GTCTC 4 cut(s) 15, 267, 816, 920
BsmI GAATGC 2 cut(s) 561, 729
BsnI GGCC 4 cut(s) 213, 434, 576, 591
Bsp1407I TGTACA 1 cut(s) 253
Bsp143I GATC 3 cut(s) 639, 753, 939
Bsp19I CCATGG 2 cut(s) 744, 1011
BspACI CCGC 5 cut(s) 411, 454, 582, 599, 971
BspANI GGCC 4 cut(s) 213, 434, 576, 591
BspDI ATCGAT 1 cut(s) 942
BspFNI CGCG 1 cut(s) 599
BspLI GGNNCC 3 cut(s) 207, 379, 742
BspOI GCTAGC 1 cut(s) 1083
BspPI GGATC 1 cut(s) 761
BspT107I GGYRCC 2 cut(s) 377, 740
BsrDI GCAATG 2 cut(s) 256, 1059
BsrGI TGTACA 1 cut(s) 253
BssECI CCNNGG 5 cut(s) 577, 612, 682, 744, 1011
BssMI GATC 3 cut(s) 639, 753, 939
BssNI GRCGYC 1 cut(s) 1035
BssSI CACGAG 1 cut(s) 14
BssT1I CCWWGG 5 cut(s) 577, 612, 682, 744, 1011
Bst2BI CACGAG 1 cut(s) 14
Bst4CI ACNGT 5 cut(s) 140, 374, 637, 766, 1046
BstACI GRCGYC 1 cut(s) 1035
BstAUI TGTACA 1 cut(s) 253
BstBAI YACGTR 1 cut(s) 369
BstC8I GCNNGC 3 cut(s) 307, 729, 1081
BstDEI CTNAG 3 cut(s) 295, 586, 654
BstDSI CCRYGG 2 cut(s) 744, 1011
BstF5I GGATG 5 cut(s) 50, 296, 456, 754, 778
BstFNI CGCG 1 cut(s) 599
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 1 cut(s) 1020
BstKTI GATC 3 cut(s) 642, 756, 942
BstMAI GTCTC 4 cut(s) 15, 267, 816, 920
BstMBI GATC 3 cut(s) 639, 753, 939
BstMWI GCNNNNNNNGC 4 cut(s) 556, 582, 588, 856
BstNSI RCATGY 1 cut(s) 563
BstSCI CCNGG 3 cut(s) 208, 503, 550
BstSFI CTRYAG 1 cut(s) 517
BstUI CGCG 1 cut(s) 599
BstV1I GCAGC 4 cut(s) 37, 472, 718, 962
BstXI CCANNNNNNTGG 1 cut(s) 619
Bsu15I ATCGAT 1 cut(s) 942
BsuRI GGCC 4 cut(s) 213, 434, 576, 591
BsuTUI ATCGAT 1 cut(s) 942
BtgI CCRYGG 2 cut(s) 744, 1011
BtrI CACGTC 1 cut(s) 595
BtsCI GGATG 5 cut(s) 50, 296, 456, 754, 778
BtsIMutI CAGTG 2 cut(s) 642, 1070
Cac8I GCNNGC 3 cut(s) 307, 729, 1081
CfoI GCGC 1 cut(s) 1020
Cfr13I GGNCC 1 cut(s) 157
ClaI ATCGAT 1 cut(s) 942
Csp6I GTAC 8 cut(s) 136, 254, 327, 370, 385, 645, 741, 839
CviAII CATG 5 cut(s) 215, 560, 745, 815, 1012
CviQI GTAC 8 cut(s) 136, 254, 327, 370, 385, 645, 741, 839
DdeI CTNAG 3 cut(s) 295, 586, 654
DpnI GATC 3 cut(s) 641, 755, 941
DpnII GATC 3 cut(s) 639, 753, 939
EaeI YGGCCR 2 cut(s) 211, 432
Eco130I CCWWGG 5 cut(s) 577, 612, 682, 744, 1011
Eco47I GGWCC 1 cut(s) 157
EcoT14I CCWWGG 5 cut(s) 577, 612, 682, 744, 1011
EcoT22I ATGCAT 1 cut(s) 561
ErhI CCWWGG 5 cut(s) 577, 612, 682, 744, 1011
FaeI CATG 5 cut(s) 218, 563, 748, 818, 1015
FalI AAGNNNNNCTT 2 cut(s) 388, 420
FatI CATG 5 cut(s) 214, 559, 744, 814, 1011
FbaI TGATCA 1 cut(s) 639
Fnu4HI GCNGC 5 cut(s) 51, 486, 583, 732, 951
FokI GGATG 5 cut(s) 57, 303, 443, 761, 765
Fsp4HI GCNGC 5 cut(s) 51, 486, 583, 732, 951
FspBI CTAG 2 cut(s) 578, 1080
GlaI GCGC 1 cut(s) 1019
GluI GCNGC 5 cut(s) 51, 486, 583, 732, 951
GsuI CTGGAG 1 cut(s) 76
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 4 cut(s) 213, 434, 576, 591
HapII CCGG 5 cut(s) 105, 210, 504, 552, 863
HhaI GCGC 1 cut(s) 1020
Hin1I GRCGYC 1 cut(s) 1035
Hin1II CATG 5 cut(s) 218, 563, 748, 818, 1015
Hin6I GCGC 1 cut(s) 1018
HinP1I GCGC 1 cut(s) 1018
HindIII AAGCTT 1 cut(s) 821
HinfI GANTC 2 cut(s) 59, 692
HpaII CCGG 5 cut(s) 105, 210, 504, 552, 863
HphI GGTGA 4 cut(s) 16, 239, 613, 637
Hpy166II GTNNAC 1 cut(s) 839
Hpy188I TCNGA 3 cut(s) 157, 421, 1040
Hpy188III TCNNGA 5 cut(s) 14, 93, 172, 710, 854
Hpy8I GTNNAC 1 cut(s) 839
Hpy99I CGWCG 2 cut(s) 395, 599
HpyAV CCTTC 8 cut(s) 28, 90, 91, 170, 622, 879, 916, 1069
HpyCH4III ACNGT 5 cut(s) 140, 374, 637, 766, 1046
HpyCH4IV ACGT 3 cut(s) 368, 594, 1035
HpyCH4V TGCA 6 cut(s) 53, 559, 727, 773, 950, 1064
HpyF10VI GCNNNNNNNGC 4 cut(s) 556, 582, 588, 856
HpyF3I CTNAG 3 cut(s) 295, 586, 654
HpySE526I ACGT 3 cut(s) 368, 594, 1035
Hsp92I GRCGYC 1 cut(s) 1035
Hsp92II CATG 5 cut(s) 218, 563, 748, 818, 1015
HspAI GCGC 1 cut(s) 1018
KpnI GGTACC 1 cut(s) 744
Ksp22I TGATCA 1 cut(s) 639
Kzo9I GATC 3 cut(s) 639, 753, 939
LmnI GCTCC 5 cut(s) 246, 302, 493, 686, 1015
Lsp1109I GCAGC 4 cut(s) 37, 472, 718, 962
LweI GCATC 2 cut(s) 281, 465
MaeI CTAG 2 cut(s) 578, 1080
MaeII ACGT 3 cut(s) 368, 594, 1035
MaeIII GTNAC 4 cut(s) 118, 232, 631, 710
MalI GATC 3 cut(s) 641, 755, 941
MboI GATC 3 cut(s) 639, 753, 939
MboII GAAGA 1 cut(s) 901
MfeI CAATTG 1 cut(s) 990
MluCI AATT 2 cut(s) 260, 990
MlyI GAGTC 1 cut(s) 686
MmeI TCCRAC 2 cut(s) 250, 268
MnlI CCTC 9 cut(s) 210, 655, 658, 658, 792, 861, 908, 917, 973
Mph1103I ATGCAT 1 cut(s) 561
MseI TTAA 3 cut(s) 675, 1001, 1087
MslI CAYNNNNRTG 4 cut(s) 43, 428, 496, 564
MspA1I CMGCKG 1 cut(s) 971
MspI CCGG 5 cut(s) 105, 210, 504, 552, 863
MspR9I CCNGG 3 cut(s) 210, 505, 552
MunI CAATTG 1 cut(s) 990
Mva1269I GAATGC 2 cut(s) 561, 729
MvnI CGCG 1 cut(s) 599
MwoI GCNNNNNNNGC 4 cut(s) 556, 582, 588, 856
NciI CCSGG 3 cut(s) 210, 505, 552
NcoI CCATGG 2 cut(s) 744, 1011
NdeII GATC 3 cut(s) 639, 753, 939
NheI GCTAGC 1 cut(s) 1079
NlaIII CATG 5 cut(s) 218, 563, 748, 818, 1015
NlaIV GGNNCC 3 cut(s) 207, 379, 742
NmuCI GTSAC 2 cut(s) 118, 710
NsiI ATGCAT 1 cut(s) 561
NspI RCATGY 1 cut(s) 563
PctI GAATGC 2 cut(s) 561, 729
PfeI GAWTC 1 cut(s) 59
PflFI GACNNNGTC 1 cut(s) 278
PkrI GCNGC 5 cut(s) 52, 487, 584, 733, 952
PleI GAGTC 1 cut(s) 686
PpsI GAGTC 1 cut(s) 686
Ppu21I YACGTR 1 cut(s) 369
PspN4I GGNNCC 3 cut(s) 207, 379, 742
PspPI GGNCC 1 cut(s) 157
PsyI GACNNNGTC 1 cut(s) 278
RsaI GTAC 8 cut(s) 137, 255, 328, 371, 386, 646, 742, 840
RsaNI GTAC 8 cut(s) 136, 254, 327, 370, 385, 645, 741, 839
RseI CAYNNNNRTG 4 cut(s) 43, 428, 496, 564
SaqAI TTAA 3 cut(s) 675, 1001, 1087
SatI GCNGC 5 cut(s) 51, 486, 583, 732, 951
Sau3AI GATC 3 cut(s) 639, 753, 939
Sau96I GGNCC 1 cut(s) 157
ScaI AGTACT 1 cut(s) 386
SchI GAGTC 1 cut(s) 686
ScrFI CCNGG 3 cut(s) 210, 505, 552
SfaNI GCATC 2 cut(s) 281, 465
SfcI CTRYAG 1 cut(s) 517
SinI GGWCC 1 cut(s) 157
SmiMI CAYNNNNRTG 4 cut(s) 43, 428, 496, 564
SmlI CTYRAG 3 cut(s) 338, 526, 854
SmoI CTYRAG 3 cut(s) 338, 526, 854
Sse9I AATT 2 cut(s) 260, 990
SsiI CCGC 5 cut(s) 411, 454, 582, 599, 971
SspI AATATT 1 cut(s) 363
SspMI CTAG 2 cut(s) 578, 1080
StyD4I CCNGG 3 cut(s) 208, 503, 550
StyI CCWWGG 5 cut(s) 577, 612, 682, 744, 1011
TaaI ACNGT 5 cut(s) 140, 374, 637, 766, 1046
TaiI ACGT 3 cut(s) 371, 597, 1038
TaqI TCGA 3 cut(s) 721, 942, 978
TasI AATT 2 cut(s) 260, 990
TatI WGTACW 3 cut(s) 135, 253, 384
TauI GCSGC 1 cut(s) 585
TfiI GAWTC 1 cut(s) 59
Tru1I TTAA 3 cut(s) 675, 1001, 1087
Tru9I TTAA 3 cut(s) 675, 1001, 1087
TscAI CASTG 2 cut(s) 642, 1077
TseFI GTSAC 2 cut(s) 118, 710
TseI GCWGC 4 cut(s) 50, 485, 731, 950
Tsp45I GTSAC 2 cut(s) 118, 710
TspDTI ATGAA 5 cut(s) 51, 192, 436, 453, 935
TspGWI ACGGA 3 cut(s) 74, 251, 408
TspRI CASTG 2 cut(s) 642, 1077
Tth111I GACNNNGTC 1 cut(s) 278
VpaK11BI GGWCC 1 cut(s) 157
XapI RAATTY 1 cut(s) 260
XceI RCATGY 1 cut(s) 563
XcmI CCANNNNNNNNNTGG 2 cut(s) 221, 742
XmaJI CCTAGG 1 cut(s) 577
XspI CTAG 2 cut(s) 578, 1080
ZraI GACGTC 1 cut(s) 1036
ZrmI AGTACT 1 cut(s) 386
Zsp2I ATGCAT 1 cut(s) 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.