Rroxscaffold_4G00331740

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000167
Physical Location & Seq
Reverse (-)
65736932 .. 65739147
2216 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00331740.1

Sequence Viewer

Length: 948 bp
ATGTCTAACCCCAGGAAGGCATTTGGATGGGCTGCAAGAGATTCATCTGGTGTTCTCTCTCCCTTCAGTTTCTCCAGAAGTTCAACTGATTTGATTGCAGGGAATCCGGAGAGAGACGTGACATTCAAGGTGTTGTACTGTGGGATTTGCCATTCGGACCTTCACATGGTCAAGAATGAATGGGGCTTCTCTACCTATCCTCTGGTTCCCGGGCATGAGATTGTCGGTGAAGTGACGGAAGTAGGGAGCAATGTACAAAAATTCAAAATTGGAGACAAAGTCGGTGTTGGAGGCATAGTGGGAGCTTGCCGATCTTGTGATAGTTGTACCGACCATCTTGAGAACTACTGCCCCAAACTAATACTCACGTACAGTGCCAAGTACTATGACGGAACCACCACCTATGGCGGTTACTCTGACATTATGGTTGCAGATGAACACTTCGTAGTCAGTATCCCGGACAACCTACCCCTTGATTGTGCTGCTCCTCTCCTATGTGCCGGAATCACAACCTACAGCCCGTTGAGGTATTTTGGACTTGACAAGCCTGGCATGCATGTGGGCGTGGTTGGCCTAGGTGGTTTAGGCCACGTCGCAGTGAAGTTTGCCAAGGCAATGGGAGTGAAGGCTGCCATTGGTACCATGGATGGGATCATTGACACGGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGTTTTGTTGAAGTCTCATGGAAAGCTTGTTATGGTTGGAGCACCGGAAAAGCCTCTTGAGCTTCCGGTTTTCCTTTACTCATGGATGGTAGCTAGTAGCGGCGGTGGAGGTATGAAGGAGACACGAGAGATGATCGATTTTGCGGCCAAGCACAACATAACGACGGACATCGAGGTTATCCCAATTGACTACTTGAACAACGCCATGGAGCGCCTTGCCAAAGCGGACGTCGGATACCGGTTTTGTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

315

Amino Acids

33.96

Weight (kDa)

6.05

Isoelectric Point (pI)

30.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 38 - 154 7.1e-27 Alcohol dehydrogenase GroES-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 927
Acc65I GGTACC 1 cut(s) 638
AccB1I GGYRCC 1 cut(s) 638
AccIII TCCGGA 1 cut(s) 106
AciI CCGC 5 cut(s) 408, 795, 798, 839, 920
AclWI GGATC 1 cut(s) 659
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 1 cut(s) 260
AcuI CTGAAG 1 cut(s) 49
AcyI GRCGYC 1 cut(s) 924
AfaI GTAC 6 cut(s) 137, 255, 328, 371, 383, 640
AfiI CCNNNNNNNGG 3 cut(s) 16, 166, 648
AgeI ACCGGT 1 cut(s) 933
AgsI TTSAA 5 cut(s) 84, 127, 265, 706, 892
AjiI CACGTC 2 cut(s) 118, 592
AjnI CCWGG 2 cut(s) 11, 547
AluBI AGCT 4 cut(s) 305, 721, 757, 788
AluI AGCT 4 cut(s) 305, 721, 757, 788
Alw21I GWGCWC 1 cut(s) 739
Alw26I GTCTC 4 cut(s) 108, 267, 714, 809
AlwI GGATC 1 cut(s) 659
Ama87I CYCGRG 1 cut(s) 209
Aor13HI TCCGGA 1 cut(s) 106
AoxI GGCC 3 cut(s) 571, 586, 840
ApeKI GCWGC 3 cut(s) 32, 482, 629
ApoI RAATTY 1 cut(s) 260
ArsI GACNNNNNNTTYG 2 cut(s) 909, 941
AsiGI ACCGGT 1 cut(s) 933
Asp718I GGTACC 1 cut(s) 638
AspA2I CCTAGG 1 cut(s) 574
AspLEI GCGC 1 cut(s) 909
AspS9I GGNCC 1 cut(s) 157
AsuC2I CCSGG 3 cut(s) 210, 211, 458
AsuHPI GGTGA 1 cut(s) 239
AvaI CYCGRG 1 cut(s) 209
AvaII GGWCC 1 cut(s) 157
AvrII CCTAGG 1 cut(s) 574
BanI GGYRCC 1 cut(s) 638
BauI CACGAG 1 cut(s) 819
Bbv12I GWGCWC 1 cut(s) 739
BbvI GCAGC 3 cut(s) 19, 469, 616
BccI CCATC 4 cut(s) 21, 342, 641, 775
BciT130I CCWGG 2 cut(s) 13, 549
BciVI GTATCC 2 cut(s) 464, 923
BcnI CCSGG 3 cut(s) 210, 211, 458
BcoDI GTCTC 4 cut(s) 108, 267, 714, 809
BfaI CTAG 2 cut(s) 575, 789
BfmI CTRYAG 1 cut(s) 514
BfoI RGCGCY 1 cut(s) 910
BfuI GTATCC 2 cut(s) 464, 923
BisI GCNGC 5 cut(s) 33, 483, 630, 796, 840
BlnI CCTAGG 1 cut(s) 574
BlsI GCNGC 5 cut(s) 34, 484, 631, 797, 841
BmcAI AGTACT 1 cut(s) 383
Bme1390I CCNGG 5 cut(s) 13, 210, 211, 458, 549
Bme18I GGWCC 1 cut(s) 157
BmeT110I CYCGRG 1 cut(s) 209
BmgBI CACGTC 2 cut(s) 118, 592
BmgT120I GGNCC 1 cut(s) 157
BmiI GGNNCC 3 cut(s) 207, 394, 640
BmrFI CCNGG 5 cut(s) 13, 210, 211, 458, 549
BpmI CTGGAG 1 cut(s) 58
BpuEI CTTGAG 2 cut(s) 359, 773
BpuMI CCSGG 3 cut(s) 210, 211, 458
Bsa29I ATCGAT 1 cut(s) 831
BsaAI YACGTR 1 cut(s) 369
BsaHI GRCGYC 1 cut(s) 924
BsaJI CCNNGG 6 cut(s) 11, 209, 574, 609, 642, 900
BsaWI WCCGGW 4 cut(s) 106, 739, 760, 933
BsaXI ACNNNNNCTCC 4 cut(s) 264, 282, 294, 312
Bsc4I CCNNNNNNNGG 3 cut(s) 16, 166, 648
Bse118I RCCGGY 1 cut(s) 933
Bse3DI GCAATG 2 cut(s) 256, 621
BseAI TCCGGA 1 cut(s) 106
BseBI CCWGG 2 cut(s) 13, 549
BseCI ATCGAT 1 cut(s) 831
BseDI CCNNGG 6 cut(s) 11, 209, 574, 609, 642, 900
BseGI GGATG 4 cut(s) 32, 652, 676, 786
BseLI CCNNNNNNNGG 3 cut(s) 16, 166, 648
BseMI GCAATG 2 cut(s) 256, 621
BseRI GAGGAG 1 cut(s) 477
BseXI GCAGC 3 cut(s) 19, 469, 616
BsgI GTGCAG 1 cut(s) 654
BshFI GGCC 3 cut(s) 573, 588, 842
BshNI GGYRCC 1 cut(s) 638
BshTI ACCGGT 1 cut(s) 933
BshVI ATCGAT 1 cut(s) 831
BsiHKAI GWGCWC 1 cut(s) 739
BsiHKCI CYCGRG 1 cut(s) 209
BsiSI CCGG 7 cut(s) 107, 210, 458, 501, 740, 761, 934
BslI CCNNNNNNNGG 3 cut(s) 16, 166, 648
BsmAI GTCTC 4 cut(s) 108, 267, 714, 809
BsmBI CGTCTC 1 cut(s) 108
BsnI GGCC 3 cut(s) 573, 588, 842
BsoBI CYCGRG 1 cut(s) 209
Bsp1286I GDGCHC 1 cut(s) 739
Bsp13I TCCGGA 1 cut(s) 106
Bsp1407I TGTACA 1 cut(s) 253
Bsp143I GATC 3 cut(s) 311, 651, 828
Bsp19I CCATGG 2 cut(s) 642, 900
BspACI CCGC 5 cut(s) 408, 795, 798, 839, 920
BspANI GGCC 3 cut(s) 573, 588, 842
BspDI ATCGAT 1 cut(s) 831
BspEI TCCGGA 1 cut(s) 106
BspLI GGNNCC 3 cut(s) 207, 394, 640
BspPI GGATC 1 cut(s) 659
BspT107I GGYRCC 1 cut(s) 638
BsrDI GCAATG 2 cut(s) 256, 621
BsrFI RCCGGY 1 cut(s) 933
BsrGI TGTACA 1 cut(s) 253
BssAI RCCGGY 1 cut(s) 933
BssECI CCNNGG 6 cut(s) 11, 209, 574, 609, 642, 900
BssMI GATC 3 cut(s) 311, 651, 828
BssNI GRCGYC 1 cut(s) 924
BssSI CACGAG 1 cut(s) 819
BssT1I CCWWGG 4 cut(s) 574, 609, 642, 900
Bst2BI CACGAG 1 cut(s) 819
Bst2UI CCWGG 2 cut(s) 13, 549
Bst4CI ACNGT 3 cut(s) 140, 374, 664
BstACI GRCGYC 1 cut(s) 924
BstAUI TGTACA 1 cut(s) 253
BstBAI YACGTR 1 cut(s) 369
BstC8I GCNNGC 2 cut(s) 307, 554
BstDSI CCRYGG 2 cut(s) 642, 900
BstF5I GGATG 4 cut(s) 32, 652, 676, 786
BstH2I RGCGCY 1 cut(s) 910
BstHHI GCGC 1 cut(s) 909
BstKTI GATC 3 cut(s) 314, 654, 831
BstMAI GTCTC 4 cut(s) 108, 267, 714, 809
BstMBI GATC 3 cut(s) 311, 651, 828
BstMWI GCNNNNNNNGC 3 cut(s) 553, 570, 754
BstNI CCWGG 2 cut(s) 13, 549
BstNSI RCATGY 2 cut(s) 556, 560
BstSCI CCNGG 5 cut(s) 11, 208, 209, 456, 547
BstSFI CTRYAG 1 cut(s) 514
BstV1I GCAGC 3 cut(s) 19, 469, 616
BstXI CCANNNNNNTGG 1 cut(s) 616
Bsu15I ATCGAT 1 cut(s) 831
BsuI GTATCC 2 cut(s) 464, 923
BsuRI GGCC 3 cut(s) 573, 588, 842
BsuTUI ATCGAT 1 cut(s) 831
BtgI CCRYGG 2 cut(s) 642, 900
BtrI CACGTC 2 cut(s) 118, 592
BtsCI GGATG 4 cut(s) 32, 652, 676, 786
BtsI GCAGTG 1 cut(s) 603
BtsIMutI CAGTG 2 cut(s) 379, 603
Cac8I GCNNGC 2 cut(s) 307, 554
CfoI GCGC 1 cut(s) 909
Cfr10I RCCGGY 1 cut(s) 933
Cfr13I GGNCC 1 cut(s) 157
Cfr9I CCCGGG 1 cut(s) 209
ClaI ATCGAT 1 cut(s) 831
Csp6I GTAC 6 cut(s) 136, 254, 327, 370, 382, 639
CspAI ACCGGT 1 cut(s) 933
CviAII CATG 8 cut(s) 166, 215, 553, 557, 643, 713, 777, 901
CviQI GTAC 6 cut(s) 136, 254, 327, 370, 382, 639
DpnI GATC 3 cut(s) 313, 653, 830
DpnII GATC 3 cut(s) 311, 651, 828
EaeI YGGCCR 1 cut(s) 840
Eco130I CCWWGG 4 cut(s) 574, 609, 642, 900
Eco47I GGWCC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 49
Eco88I CYCGRG 1 cut(s) 209
EcoRII CCWGG 2 cut(s) 11, 547
EcoT14I CCWWGG 4 cut(s) 574, 609, 642, 900
EcoT22I ATGCAT 1 cut(s) 558
ErhI CCWWGG 4 cut(s) 574, 609, 642, 900
Esp3I CGTCTC 1 cut(s) 108
FaeI CATG 8 cut(s) 169, 218, 556, 560, 646, 716, 780, 904
FatI CATG 8 cut(s) 165, 214, 552, 556, 642, 712, 776, 900
Fnu4HI GCNGC 5 cut(s) 33, 483, 630, 796, 840
FokI GGATG 4 cut(s) 39, 659, 663, 793
Fsp4HI GCNGC 5 cut(s) 33, 483, 630, 796, 840
FspBI CTAG 2 cut(s) 575, 789
GlaI GCGC 1 cut(s) 908
GluI GCNGC 5 cut(s) 33, 483, 630, 796, 840
GsuI CTGGAG 1 cut(s) 58
HaeII RGCGCY 1 cut(s) 910
HaeIII GGCC 3 cut(s) 573, 588, 842
HapII CCGG 7 cut(s) 107, 210, 458, 501, 740, 761, 934
HhaI GCGC 1 cut(s) 909
Hin1I GRCGYC 1 cut(s) 924
Hin1II CATG 8 cut(s) 169, 218, 556, 560, 646, 716, 780, 904
Hin6I GCGC 1 cut(s) 907
HinP1I GCGC 1 cut(s) 907
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 3 cut(s) 41, 103, 504
HpaII CCGG 7 cut(s) 107, 210, 458, 501, 740, 761, 934
HphI GGTGA 1 cut(s) 239
Hpy188I TCNGA 3 cut(s) 157, 418, 929
Hpy188III TCNNGA 5 cut(s) 75, 107, 172, 338, 752
Hpy99I CGWCG 3 cut(s) 596, 862, 929
HpyAV CCTTC 5 cut(s) 10, 73, 170, 619, 805
HpyCH4III ACNGT 3 cut(s) 140, 374, 664
HpyCH4IV ACGT 4 cut(s) 117, 368, 591, 924
HpyCH4V TGCA 5 cut(s) 35, 98, 431, 556, 671
HpyF10VI GCNNNNNNNGC 3 cut(s) 553, 570, 754
HpySE526I ACGT 4 cut(s) 117, 368, 591, 924
Hsp92I GRCGYC 1 cut(s) 924
Hsp92II CATG 8 cut(s) 169, 218, 556, 560, 646, 716, 780, 904
HspAI GCGC 1 cut(s) 907
Kpn2I TCCGGA 1 cut(s) 106
KpnI GGTACC 1 cut(s) 642
Kzo9I GATC 3 cut(s) 311, 651, 828
LmnI GCTCC 5 cut(s) 246, 302, 490, 734, 904
Lsp1109I GCAGC 3 cut(s) 19, 469, 616
MaeI CTAG 2 cut(s) 575, 789
MaeII ACGT 4 cut(s) 117, 368, 591, 924
MaeIII GTNAC 3 cut(s) 118, 232, 410
MalI GATC 3 cut(s) 313, 653, 830
MboI GATC 3 cut(s) 311, 651, 828
MfeI CAATTG 1 cut(s) 879
MhlI GDGCHC 1 cut(s) 739
MluCI AATT 3 cut(s) 260, 267, 879
MmeI TCCRAC 3 cut(s) 268, 712, 907
MnlI CCTC 8 cut(s) 210, 284, 498, 519, 690, 759, 797, 862
Mph1103I ATGCAT 1 cut(s) 558
MroI TCCGGA 1 cut(s) 106
MslI CAYNNNNRTG 2 cut(s) 25, 557
MspI CCGG 7 cut(s) 107, 210, 458, 501, 740, 761, 934
MspR9I CCNGG 5 cut(s) 13, 210, 211, 458, 549
MunI CAATTG 1 cut(s) 879
MvaI CCWGG 2 cut(s) 13, 549
MwoI GCNNNNNNNGC 3 cut(s) 553, 570, 754
NciI CCSGG 3 cut(s) 210, 211, 458
NcoI CCATGG 2 cut(s) 642, 900
NdeII GATC 3 cut(s) 311, 651, 828
NlaIII CATG 8 cut(s) 169, 218, 556, 560, 646, 716, 780, 904
NlaIV GGNNCC 3 cut(s) 207, 394, 640
NmuCI GTSAC 2 cut(s) 118, 232
NsiI ATGCAT 1 cut(s) 558
NspI RCATGY 2 cut(s) 556, 560
PaeI GCATGC 1 cut(s) 556
PfeI GAWTC 3 cut(s) 41, 103, 504
PflFI GACNNNGTC 1 cut(s) 278
PfoI TCCNGGA 1 cut(s) 456
PinAI ACCGGT 1 cut(s) 933
PkrI GCNGC 5 cut(s) 34, 484, 631, 797, 841
Ppu21I YACGTR 1 cut(s) 369
Psp6I CCWGG 2 cut(s) 11, 547
PspGI CCWGG 2 cut(s) 11, 547
PspN4I GGNNCC 3 cut(s) 207, 394, 640
PspPI GGNCC 1 cut(s) 157
PsyI GACNNNGTC 1 cut(s) 278
RsaI GTAC 6 cut(s) 137, 255, 328, 371, 383, 640
RsaNI GTAC 6 cut(s) 136, 254, 327, 370, 382, 639
RseI CAYNNNNRTG 2 cut(s) 25, 557
SatI GCNGC 5 cut(s) 33, 483, 630, 796, 840
Sau3AI GATC 3 cut(s) 311, 651, 828
Sau96I GGNCC 1 cut(s) 157
ScaI AGTACT 1 cut(s) 383
ScrFI CCNGG 5 cut(s) 13, 210, 211, 458, 549
SduI GDGCHC 1 cut(s) 739
SfcI CTRYAG 1 cut(s) 514
SinI GGWCC 1 cut(s) 157
SmaI CCCGGG 1 cut(s) 211
SmiMI CAYNNNNRTG 2 cut(s) 25, 557
SmlI CTYRAG 2 cut(s) 338, 752
SmoI CTYRAG 2 cut(s) 338, 752
SphI GCATGC 1 cut(s) 556
Sse9I AATT 3 cut(s) 260, 267, 879
SsiI CCGC 5 cut(s) 408, 795, 798, 839, 920
SspMI CTAG 2 cut(s) 575, 789
StyD4I CCNGG 5 cut(s) 11, 208, 209, 456, 547
StyI CCWWGG 4 cut(s) 574, 609, 642, 900
TaaI ACNGT 3 cut(s) 140, 374, 664
TaiI ACGT 4 cut(s) 120, 371, 594, 927
TaqI TCGA 2 cut(s) 831, 867
TasI AATT 3 cut(s) 260, 267, 879
TatI WGTACW 3 cut(s) 135, 253, 381
TauI GCSGC 2 cut(s) 798, 842
TfiI GAWTC 3 cut(s) 41, 103, 504
TscAI CASTG 2 cut(s) 379, 603
TseFI GTSAC 2 cut(s) 118, 232
TseI GCWGC 3 cut(s) 32, 482, 629
Tsp45I GTSAC 2 cut(s) 118, 232
TspDTI ATGAA 4 cut(s) 33, 192, 450, 824
TspGWI ACGGA 3 cut(s) 251, 405, 875
TspMI CCCGGG 1 cut(s) 209
TspRI CASTG 2 cut(s) 379, 603
Tth111I GACNNNGTC 1 cut(s) 278
VpaK11BI GGWCC 1 cut(s) 157
XapI RAATTY 1 cut(s) 260
XceI RCATGY 2 cut(s) 556, 560
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XmaI CCCGGG 1 cut(s) 209
XmaJI CCTAGG 1 cut(s) 574
XspI CTAG 2 cut(s) 575, 789
ZraI GACGTC 1 cut(s) 925
ZrmI AGTACT 1 cut(s) 383
Zsp2I ATGCAT 1 cut(s) 558
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.