Rw2G007140

Dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000167
Physical Location & Seq
Forward (+)
6916661 .. 6918387
1727 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G007140.1

Sequence Viewer

Length: 1218 bp
ATGCTGGTAACCGGTGACGTCAGTTTAATCTCTTGGACTTTCTATTTGGGTCACCCAATACGTCACCACCTCTTCGACATTTCTATTTTTCTCACCAAGGACGTCACCCCCGCCTATCTCCTCCCTCTATATATACCATTTAACTCCATTGAAGAACACCCCAAGAAGGCATTTGGATGGGCTGCAAGAGATTCATCTGGTGTTCTCTCTCCCTTCCGTTTCTCCAGAAGGGAAACCGGAGAGAAAGACGTGACGTTCAAAGTGTTGTACTGTGGGATTTGCCATTCGGGCCTTCACAATGTCAAGAATGAATGGGGCTCCTCTACCTATCCTCTGGTTCCCGGCCATGAGATTGTTGGTGAAGTAACGGAAGTAGGGAGCCATGTAAAAAAATTCAAAGTTGGAGACAAAGTCGGTGTTGGATGCTTAGTGGGTGCTTGCCAATCTTGTGATAGTTGTACCGACCACCTTGAGAACTACTGCCCCAAACAAATACTCACGTACGGTGCCAAGTACTACGACGGAACCACCACCTATGGAGGTTACTCTGACATTTTGGTGGCCGATGAACACTTCATAGTCCGCATCCCAAACAACCTACCGCTTGATAGTGCTGCTCCACTCCTATGTGCCGGGATTACAACCTACAGCCCCTTGAGATATTATGGACTAGACAAGCCCGGAATGCATGTGGGTGTGGTTGGCCTAGGCGGCTTAGGCCACGTCGCGGTGAAGTTTGCCAAGGCTATGGGGGTGAAGGTGACAGTGATCAGTACTTCCCCTAAGAAAGAGGAGGAAGCTATTAAACACCTTGGAGCTGACTCGTTTTTGGTTAGTCGTGACCAAGATCAAATGCAGGCTGCCATTGGTACCATGGATGGGATCATTGACACAGTTTCTGCACAACATCCTCTCTTGCCTTTGATTGGTTTGTTGAAGTCTCATGGAAAGCTTGTTATGGTTGGTGCACCAGAAAAGCCTCTTGAGCTTCCGGTTTTTCCTTTACTCATGGGAAGGAAGATGGTAGCTGGTAGCCTCATTGGAGGTATGAAGGAGACACAAGAGATGATCGATTTTGCGGCCAAGCACAACATAGCAGCAGAGATCGAGGTTATCCCAATTGACTACTTGAACAATGCCATGGAGCGCCTTGCCAAAGCAGACGTCAGATACCGTTTTGTCATTGACATTGGAAACACACTAAAGGCTAGCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
ADH_N ADH_zinc_N

Protein Analysis

405

Amino Acids

44.14

Weight (kDa)

6.59

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ADH_N PF08240 80 - 197 3.6e-24 Alcohol dehydrogenase GroES-like domain
2-Hacid_dh_C PF02826 220 - 270 6.1e-06 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ADH_zinc_N PF00107 238 - 361 3.8e-23 Zinc-binding dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G37980 AT4G37980 AT4G37990
fragaria_vesca FvH4_1g19210 FvH4_1g19220 FvH4_1g19240 FvH4_1g19240 FvH4_1g19261 FvH4_1g19262 FvH4_1g19263 FvH4_1g19263 FvH4_1g19265 FvH4_1g19281 FvH4_1g19281 FvH4_7g07240 FvH4_7g07240 FvH4_7g07240
malus_domestica MD01G1042500.v1.1 MD01G1042600.v1.1 MD01G1042800.v1.1 MD01G1042900.v1.1 MD05G1034100.v1.1 MD10G1035900.v1.1 MD10G1036000.v1.1 MD10G1155000.v1.1 MD10G1155100.v1.1 MD10G1155200.v1.1 MD10G1155400.v1.1 MD10G1155700.v1.1 MD10G1155800.v1.1 MD15G1308800.v1.1 MD15G1308900.v1.1
prunus_persica Prupe.6G205600_v2.0.a1 Prupe.6G205700_v2.0.a1 Prupe.6G205800_v2.0.a1 Prupe.6G205900_v2.0.a1 Prupe.6G206300_v2.0.a1 Prupe.6G206800_v2.0.a1 Prupe.6G207100_v2.0.a1 Prupe.6G207200_v2.0.a1 Prupe.6G207300_v2.0.a1 Prupe.6G207400_v2.0.a1 Prupe.6G207500_v2.0.a1 Prupe.6G207600_v2.0.a1 Prupe.6G207700_v2.0.a1 Prupe.6G207900_v2.0.a1
pyrus_communis pycom01g06970 pycom01g06980 pycom01g06990 pycom05g02460 pycom08g00750 pycom10g13410 pycom15g27310 pycom15g27320
rosa_chinensis RchiOBHm_Chr1g0314861 RchiOBHm_Chr1g0345441 RchiOBHm_Chr1g0345451 RchiOBHm_Chr1g0345621 RchiOBHm_Chr1g0345751 RchiOBHm_Chr1g0345861 RchiOBHm_Chr1g0345871 RchiOBHm_Chr1g0345891 RchiOBHm_Chr2g0094851 RchiOBHm_Chr2g0110471 RchiOBHm_Chr2g0110511 RchiOBHm_Chr2g0110531 RchiOBHm_Chr2g0110541 RchiOBHm_Chr2g0110571 RchiOBHm_Chr5g0039381 RchiOBHm_Chr5g0039391 RchiOBHm_Chr6g0270311 RchiOBHm_Chr6g0270331 RchiOBHm_Chr6g0270411 RchiOBHm_Chr6g0270431
rosa_laevigata RLG00000000515 RLG00000013793 RLG00000013797 RLG00000013799 RLG00000016525 RLG00000017808 RLG00000017811 RLG00000017813 RLG00000017816 RLG00000017819 RLG00000017822 RLG00000017824 RLG00000017825 RLG00000028835
rosa_multiflora Rmu_co8225458.1_g000001 Rmu_sc0000389.1_g000006 Rmu_sc0000389.1_g000014 Rmu_sc0000389.1_g000023 Rmu_sc0001292.1_g000012 Rmu_sc0001292.1_g000026 Rmu_sc0002145.1_g000003 Rmu_sc0002329.1_g000033 Rmu_sc0002833.1_g000044 Rmu_sc0004316.1_g000012 Rmu_sc0004439.1_g000003 Rmu_sc0006422.1_g000028 Rmu_sc0009479.1_g000012 Rmu_sc0010489.1_g000009 Rmu_sc0010489.1_g000010 Rmu_sc0017837.1_g000003 Rmu_sc0032320.1_g000001
rosa_roxburghii Rroxscaffold_1G00050770 Rroxscaffold_2G00133110 Rroxscaffold_2G00133140 Rroxscaffold_2G00133200 Rroxscaffold_2G00133270 Rroxscaffold_2G00133290 Rroxscaffold_2G00133300 Rroxscaffold_2G00133350 Rroxscaffold_4G00292490 Rroxscaffold_4G00309020 Rroxscaffold_4G00331740 Rroxscaffold_4G00331800 Rroxscaffold_6G00404470 Rroxscaffold_7G00197950 Rroxscaffold_7G00197990 Rroxscaffold_7G00198020
rosa_rugosa Rorug01G0002500 Rorug02G0047200 Rorug02G0047300 Rorug02G0047300 Rorug02G0047400 Rorug02G0168000 Rorug02G0168000 Rorug02G0168100 Rorug02G0168100 Rorug02G0168400.1 Rorug03G0157600 Rorug03G0157700 Rorug05G0112600 Rorug06G0054600 Rorug06G0054700
rosa_samantha Rh1AG013300 Rh1AG195600 Rh1AG195700 Rh1AG196000 Rh1BG004900 Rh1BG114300 Rh2AG132300 Rh2BG095500 Rh2BG229700 Rh2BG229800 Rh2CG097400 Rh2CG221500 Rh2CG221800 Rh2CG222100 Rh2CG222200 Rh2CG222500 Rh2CG222600 Rh2CG345000 Rh5BG269700 Rh6AG172900 Rh6AG173100 Rh6CG080500 Rh6DG075900 Rh6DG164700 Rh6DG164900 Rh6DG165200 Rh6DG165300
rosa_wichuraiana Rw0G015390 Rw1G000600 Rw1G016130 Rw1G016190 Rw2G007140 Rw2G016970 Rw2G016990 Rw2G017000 Rw3G018910 Rw3G018920 Rw3G018930 Rw5G024830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 21, 105, 1167
Acc65I GGTACC 1 cut(s) 869
AccB1I GGYRCC 2 cut(s) 506, 869
AccII CGCG 1 cut(s) 728
AciI CCGC 6 cut(s) 111, 583, 602, 711, 728, 1079
AclWI GGATC 1 cut(s) 890
AcoI YGGCCR 3 cut(s) 343, 561, 1080
AcsI RAATTY 1 cut(s) 392
AcyI GRCGYC 3 cut(s) 18, 102, 1164
AfaI GTAC 6 cut(s) 269, 460, 503, 515, 775, 871
AfiI CCNNNNNNNGG 4 cut(s) 166, 727, 879, 926
AgeI ACCGGT 1 cut(s) 11
AgsI TTSAA 5 cut(s) 152, 259, 397, 937, 1132
AjiI CACGTC 2 cut(s) 250, 724
AluBI AGCT 5 cut(s) 800, 818, 952, 988, 1028
AluI AGCT 5 cut(s) 800, 818, 952, 988, 1028
Alw21I GWGCWC 1 cut(s) 970
Alw26I GTCTC 3 cut(s) 399, 945, 1049
Alw44I GTGCAC 1 cut(s) 966
AlwI GGATC 1 cut(s) 890
AlwNI CAGNNNCTG 1 cut(s) 899
AoxI GGCC 6 cut(s) 289, 343, 561, 703, 718, 1080
ApaLI GTGCAC 1 cut(s) 966
ApeKI GCWGC 4 cut(s) 182, 614, 860, 1097
ApoI RAATTY 1 cut(s) 392
ArsI GACNNNNNNTTYG 4 cut(s) 28, 60, 1149, 1181
AsiGI ACCGGT 1 cut(s) 11
Asp718I GGTACC 1 cut(s) 869
AspA2I CCTAGG 1 cut(s) 706
AspLEI GCGC 1 cut(s) 1149
AspS9I GGNCC 1 cut(s) 289
AsuC2I CCSGG 3 cut(s) 342, 634, 681
AsuHPI GGTGA 9 cut(s) 26, 44, 56, 85, 97, 371, 742, 766, 772
AsuNHI GCTAGC 1 cut(s) 1208
AvrII CCTAGG 1 cut(s) 706
BaeGI GKGCMC 1 cut(s) 970
BanI GGYRCC 2 cut(s) 506, 869
BanII GRGCYC 1 cut(s) 320
Bbv12I GWGCWC 1 cut(s) 970
BbvI GCAGC 4 cut(s) 169, 601, 847, 1109
BccI CCATC 3 cut(s) 171, 872, 1015
BclI TGATCA 1 cut(s) 768
BcnI CCSGG 3 cut(s) 342, 634, 681
BcoDI GTCTC 3 cut(s) 399, 945, 1049
BfaI CTAG 3 cut(s) 671, 707, 1209
BfmI CTRYAG 1 cut(s) 646
BfoI RGCGCY 1 cut(s) 1150
BglI GCCNNNNNGGC 2 cut(s) 288, 711
BisI GCNGC 6 cut(s) 183, 615, 712, 861, 1080, 1098
BlnI CCTAGG 1 cut(s) 706
BlsI GCNGC 6 cut(s) 184, 616, 713, 862, 1081, 1099
BmcAI AGTACT 2 cut(s) 515, 775
Bme1390I CCNGG 3 cut(s) 342, 634, 681
BmgBI CACGTC 2 cut(s) 250, 724
BmgT120I GGNCC 1 cut(s) 289
BmiI GGNNCC 6 cut(s) 319, 339, 380, 508, 526, 871
BmrFI CCNGG 3 cut(s) 342, 634, 681
BmsI GCATC 2 cut(s) 413, 594
BmtI GCTAGC 1 cut(s) 1212
BpmI CTGGAG 1 cut(s) 208
Bpu10I CCTNAGC 1 cut(s) 715
BpuEI CTTGAG 3 cut(s) 491, 676, 1004
BpuMI CCSGG 3 cut(s) 342, 634, 681
Bsa29I ATCGAT 1 cut(s) 1071
BsaAI YACGTR 1 cut(s) 501
BsaHI GRCGYC 3 cut(s) 18, 102, 1164
BsaJI CCNNGG 6 cut(s) 96, 706, 741, 811, 873, 1140
BsaWI WCCGGW 3 cut(s) 11, 236, 991
BsaXI ACNNNNNCTCC 2 cut(s) 396, 426
Bsc4I CCNNNNNNNGG 4 cut(s) 166, 727, 879, 926
Bse118I RCCGGY 1 cut(s) 11
BseCI ATCGAT 1 cut(s) 1071
BseDI CCNNGG 6 cut(s) 96, 706, 741, 811, 873, 1140
BseGI GGATG 5 cut(s) 182, 428, 585, 883, 907
BseLI CCNNNNNNNGG 4 cut(s) 166, 727, 879, 926
BseRI GAGGAG 3 cut(s) 110, 310, 806
BseSI GKGCMC 1 cut(s) 970
BseXI GCAGC 4 cut(s) 169, 601, 847, 1109
BsgI GTGCAG 1 cut(s) 885
Bsh1236I CGCG 1 cut(s) 728
BshFI GGCC 6 cut(s) 291, 345, 563, 705, 720, 1082
BshNI GGYRCC 2 cut(s) 506, 869
BshTI ACCGGT 1 cut(s) 11
BshVI ATCGAT 1 cut(s) 1071
BsiHKAI GWGCWC 1 cut(s) 970
BsiSI CCGG 6 cut(s) 12, 237, 342, 633, 681, 992
BsiWI CGTACG 1 cut(s) 501
BslI CCNNNNNNNGG 4 cut(s) 166, 727, 879, 926
BsmAI GTCTC 3 cut(s) 399, 945, 1049
BsmI GAATGC 1 cut(s) 690
BsnI GGCC 6 cut(s) 291, 345, 563, 705, 720, 1082
Bsp1286I GDGCHC 2 cut(s) 320, 970
Bsp143I GATC 5 cut(s) 768, 847, 882, 1068, 1104
Bsp19I CCATGG 2 cut(s) 873, 1140
BspACI CCGC 6 cut(s) 111, 583, 602, 711, 728, 1079
BspANI GGCC 6 cut(s) 291, 345, 563, 705, 720, 1082
BspDI ATCGAT 1 cut(s) 1071
BspFNI CGCG 1 cut(s) 728
BspLI GGNNCC 6 cut(s) 319, 339, 380, 508, 526, 871
BspOI GCTAGC 1 cut(s) 1212
BspPI GGATC 1 cut(s) 890
BspT107I GGYRCC 2 cut(s) 506, 869
BsrFI RCCGGY 1 cut(s) 11
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 6 cut(s) 96, 706, 741, 811, 873, 1140
BssMI GATC 5 cut(s) 768, 847, 882, 1068, 1104
BssNI GRCGYC 3 cut(s) 18, 102, 1164
BssT1I CCWWGG 6 cut(s) 96, 706, 741, 811, 873, 1140
Bst4CI ACNGT 5 cut(s) 272, 506, 766, 895, 1175
Bst6I CTCTTC 1 cut(s) 77
BstACI GRCGYC 3 cut(s) 18, 102, 1164
BstBAI YACGTR 1 cut(s) 501
BstC8I GCNNGC 3 cut(s) 439, 858, 1210
BstDEI CTNAG 3 cut(s) 427, 715, 783
BstDSI CCRYGG 2 cut(s) 873, 1140
BstEII GGTNACC 2 cut(s) 7, 50
BstF5I GGATG 5 cut(s) 182, 428, 585, 883, 907
BstFNI CGCG 1 cut(s) 728
BstH2I RGCGCY 1 cut(s) 1150
BstHHI GCGC 1 cut(s) 1149
BstKTI GATC 5 cut(s) 771, 850, 885, 1071, 1107
BstMAI GTCTC 3 cut(s) 399, 945, 1049
BstMBI GATC 5 cut(s) 768, 847, 882, 1068, 1104
BstMWI GCNNNNNNNGC 5 cut(s) 288, 685, 711, 717, 985
BstNSI RCATGY 1 cut(s) 692
BstPI GGTNACC 2 cut(s) 7, 50
BstSCI CCNGG 3 cut(s) 340, 632, 679
BstSFI CTRYAG 1 cut(s) 646
BstSLI GKGCMC 1 cut(s) 970
BstUI CGCG 1 cut(s) 728
BstV1I GCAGC 4 cut(s) 169, 601, 847, 1109
BstXI CCANNNNNNTGG 1 cut(s) 748
Bsu15I ATCGAT 1 cut(s) 1071
BsuRI GGCC 6 cut(s) 291, 345, 563, 705, 720, 1082
BsuTUI ATCGAT 1 cut(s) 1071
BtgI CCRYGG 2 cut(s) 873, 1140
BtrI CACGTC 2 cut(s) 250, 724
BtsCI GGATG 5 cut(s) 182, 428, 585, 883, 907
BtsIMutI CAGTG 1 cut(s) 771
Cac8I GCNNGC 3 cut(s) 439, 858, 1210
CaiI CAGNNNCTG 1 cut(s) 899
CfoI GCGC 1 cut(s) 1149
Cfr10I RCCGGY 1 cut(s) 11
Cfr13I GGNCC 1 cut(s) 289
ClaI ATCGAT 1 cut(s) 1071
Csp6I GTAC 6 cut(s) 268, 459, 502, 514, 774, 870
CspAI ACCGGT 1 cut(s) 11
CviAII CATG 7 cut(s) 347, 383, 689, 874, 944, 1009, 1141
CviQI GTAC 6 cut(s) 268, 459, 502, 514, 774, 870
DdeI CTNAG 3 cut(s) 427, 715, 783
DpnI GATC 5 cut(s) 770, 849, 884, 1070, 1106
DpnII GATC 5 cut(s) 768, 847, 882, 1068, 1104
EaeI YGGCCR 3 cut(s) 343, 561, 1080
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
Eco130I CCWWGG 6 cut(s) 96, 706, 741, 811, 873, 1140
Eco24I GRGCYC 1 cut(s) 320
Eco91I GGTNACC 2 cut(s) 7, 50
EcoO65I GGTNACC 2 cut(s) 7, 50
EcoT14I CCWWGG 6 cut(s) 96, 706, 741, 811, 873, 1140
EcoT22I ATGCAT 1 cut(s) 690
EcoT38I GRGCYC 1 cut(s) 320
ErhI CCWWGG 6 cut(s) 96, 706, 741, 811, 873, 1140
FaeI CATG 7 cut(s) 350, 386, 692, 877, 947, 1012, 1144
FatI CATG 7 cut(s) 346, 382, 688, 873, 943, 1008, 1140
FauI CCCGC 1 cut(s) 118
FbaI TGATCA 1 cut(s) 768
Fnu4HI GCNGC 6 cut(s) 183, 615, 712, 861, 1080, 1098
FokI GGATG 5 cut(s) 189, 435, 572, 890, 894
FriOI GRGCYC 1 cut(s) 320
Fsp4HI GCNGC 6 cut(s) 183, 615, 712, 861, 1080, 1098
FspBI CTAG 3 cut(s) 671, 707, 1209
GlaI GCGC 1 cut(s) 1148
GluI GCNGC 6 cut(s) 183, 615, 712, 861, 1080, 1098
GsuI CTGGAG 1 cut(s) 208
HaeII RGCGCY 1 cut(s) 1150
HaeIII GGCC 6 cut(s) 291, 345, 563, 705, 720, 1082
HapII CCGG 6 cut(s) 12, 237, 342, 633, 681, 992
HhaI GCGC 1 cut(s) 1149
Hin1I GRCGYC 3 cut(s) 18, 102, 1164
Hin1II CATG 7 cut(s) 350, 386, 692, 877, 947, 1012, 1144
Hin6I GCGC 1 cut(s) 1147
HinP1I GCGC 1 cut(s) 1147
HindIII AAGCTT 1 cut(s) 950
HinfI GANTC 2 cut(s) 191, 821
HpaII CCGG 6 cut(s) 12, 237, 342, 633, 681, 992
HphI GGTGA 9 cut(s) 26, 44, 56, 85, 97, 371, 742, 766, 772
Hpy166II GTNNAC 1 cut(s) 968
Hpy188I TCNGA 2 cut(s) 550, 1169
Hpy188III TCNNGA 4 cut(s) 225, 304, 839, 983
Hpy8I GTNNAC 1 cut(s) 968
Hpy99I CGWCG 2 cut(s) 524, 728
HpyAV CCTTC 7 cut(s) 160, 222, 223, 302, 751, 1008, 1045
HpyCH4III ACNGT 5 cut(s) 272, 506, 766, 895, 1175
HpyCH4IV ACGT 8 cut(s) 18, 61, 102, 249, 254, 500, 723, 1164
HpyCH4V TGCA 5 cut(s) 185, 688, 856, 902, 968
HpyF10VI GCNNNNNNNGC 5 cut(s) 288, 685, 711, 717, 985
HpyF3I CTNAG 3 cut(s) 427, 715, 783
HpySE526I ACGT 8 cut(s) 18, 61, 102, 249, 254, 500, 723, 1164
Hsp92I GRCGYC 3 cut(s) 18, 102, 1164
Hsp92II CATG 7 cut(s) 350, 386, 692, 877, 947, 1012, 1144
HspAI GCGC 1 cut(s) 1147
KpnI GGTACC 1 cut(s) 873
Ksp22I TGATCA 1 cut(s) 768
Kzo9I GATC 5 cut(s) 768, 847, 882, 1068, 1104
LmnI GCTCC 5 cut(s) 323, 378, 622, 815, 1144
Lsp1109I GCAGC 4 cut(s) 169, 601, 847, 1109
LweI GCATC 2 cut(s) 413, 594
MaeI CTAG 3 cut(s) 671, 707, 1209
MaeII ACGT 8 cut(s) 18, 61, 102, 249, 254, 500, 723, 1164
MalI GATC 5 cut(s) 770, 849, 884, 1070, 1106
MboI GATC 5 cut(s) 768, 847, 882, 1068, 1104
MboII GAAGA 3 cut(s) 64, 164, 1030
MfeI CAATTG 1 cut(s) 1119
MhlI GDGCHC 2 cut(s) 320, 970
MluCI AATT 2 cut(s) 392, 1119
MlyI GAGTC 1 cut(s) 815
MmeI TCCRAC 2 cut(s) 382, 400
Mph1103I ATGCAT 1 cut(s) 690
MseI TTAA 4 cut(s) 26, 141, 804, 1216
MslI CAYNNNNRTG 4 cut(s) 175, 557, 625, 693
MspI CCGG 6 cut(s) 12, 237, 342, 633, 681, 992
MspR9I CCNGG 3 cut(s) 342, 634, 681
MunI CAATTG 1 cut(s) 1119
Mva1269I GAATGC 1 cut(s) 690
MvnI CGCG 1 cut(s) 728
MwoI GCNNNNNNNGC 5 cut(s) 288, 685, 711, 717, 985
NciI CCSGG 3 cut(s) 342, 634, 681
NcoI CCATGG 2 cut(s) 873, 1140
NdeII GATC 5 cut(s) 768, 847, 882, 1068, 1104
NheI GCTAGC 1 cut(s) 1208
NlaIII CATG 7 cut(s) 350, 386, 692, 877, 947, 1012, 1144
NlaIV GGNNCC 6 cut(s) 319, 339, 380, 508, 526, 871
NmuCI GTSAC 7 cut(s) 14, 50, 62, 103, 250, 760, 839
NsiI ATGCAT 1 cut(s) 690
NspI RCATGY 1 cut(s) 692
PctI GAATGC 1 cut(s) 690
PfeI GAWTC 1 cut(s) 191
Pfl23II CGTACG 1 cut(s) 501
PflFI GACNNNGTC 1 cut(s) 410
PinAI ACCGGT 1 cut(s) 11
PkrI GCNGC 6 cut(s) 184, 616, 713, 862, 1081, 1099
PleI GAGTC 1 cut(s) 815
PpsI GAGTC 1 cut(s) 815
Ppu21I YACGTR 1 cut(s) 501
PspEI GGTNACC 2 cut(s) 7, 50
PspLI CGTACG 1 cut(s) 501
PspN4I GGNNCC 6 cut(s) 319, 339, 380, 508, 526, 871
PspPI GGNCC 1 cut(s) 289
PstNI CAGNNNCTG 1 cut(s) 899
PsyI GACNNNGTC 1 cut(s) 410
RsaI GTAC 6 cut(s) 269, 460, 503, 515, 775, 871
RsaNI GTAC 6 cut(s) 268, 459, 502, 514, 774, 870
RseI CAYNNNNRTG 4 cut(s) 175, 557, 625, 693
SaqAI TTAA 4 cut(s) 26, 141, 804, 1216
SatI GCNGC 6 cut(s) 183, 615, 712, 861, 1080, 1098
Sau3AI GATC 5 cut(s) 768, 847, 882, 1068, 1104
Sau96I GGNCC 1 cut(s) 289
ScaI AGTACT 2 cut(s) 515, 775
SchI GAGTC 1 cut(s) 815
ScrFI CCNGG 3 cut(s) 342, 634, 681
SduI GDGCHC 2 cut(s) 320, 970
SfaNI GCATC 2 cut(s) 413, 594
SfcI CTRYAG 1 cut(s) 646
SmiMI CAYNNNNRTG 4 cut(s) 175, 557, 625, 693
SmlI CTYRAG 3 cut(s) 470, 655, 983
SmoI CTYRAG 3 cut(s) 470, 655, 983
Sse9I AATT 2 cut(s) 392, 1119
SsiI CCGC 6 cut(s) 111, 583, 602, 711, 728, 1079
SspMI CTAG 3 cut(s) 671, 707, 1209
StyD4I CCNGG 3 cut(s) 340, 632, 679
StyI CCWWGG 6 cut(s) 96, 706, 741, 811, 873, 1140
TaaI ACNGT 5 cut(s) 272, 506, 766, 895, 1175
TaiI ACGT 8 cut(s) 21, 64, 105, 252, 257, 503, 726, 1167
TaqI TCGA 3 cut(s) 75, 1071, 1107
TasI AATT 2 cut(s) 392, 1119
TatI WGTACW 3 cut(s) 267, 513, 773
TauI GCSGC 2 cut(s) 714, 1082
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 4 cut(s) 26, 141, 804, 1216
Tru9I TTAA 4 cut(s) 26, 141, 804, 1216
TscAI CASTG 1 cut(s) 771
TseFI GTSAC 7 cut(s) 14, 50, 62, 103, 250, 760, 839
TseI GCWGC 4 cut(s) 182, 614, 860, 1097
Tsp45I GTSAC 7 cut(s) 14, 50, 62, 103, 250, 760, 839
TspDTI ATGAA 5 cut(s) 183, 324, 565, 582, 1064
TspGWI ACGGA 3 cut(s) 206, 383, 537
TspRI CASTG 1 cut(s) 771
Tth111I GACNNNGTC 1 cut(s) 410
VneI GTGCAC 1 cut(s) 966
XapI RAATTY 1 cut(s) 392
XceI RCATGY 1 cut(s) 692
XcmI CCANNNNNNNNNTGG 2 cut(s) 353, 871
XmaJI CCTAGG 1 cut(s) 706
XspI CTAG 3 cut(s) 671, 707, 1209
ZraI GACGTC 3 cut(s) 19, 103, 1165
ZrmI AGTACT 2 cut(s) 515, 775
Zsp2I ATGCAT 1 cut(s) 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.