Nuclear transcription factor Y subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37060 AT2G37060 AT2G37060 AT3G53340 AT3G53340 AT3G53340 AT3G53340 AT3G53340 |
| fragaria_vesca | FvH4_6g15260 FvH4_6g15260 FvH4_6g15260 FvH4_6g15260 FvH4_6g15260 |
| malus_domestica | MD04G1104700.v1.1 MD12G1124800.v1.1 |
| prunus_persica | Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 |
| pyrus_communis | pycom04g09970 pycom12g12320 |
| rosa_chinensis | RchiOBHm_Chr2g0145071 RchiOBHm_Chr3g0468661 RchiOBHm_Chr5g0066261 |
| rosa_laevigata | RLG00000024032 RLG00000024417 |
| rosa_multiflora | Rmu_co8446349.1_g000001 Rmu_sc0009516.1_g000001 Rmu_sc0011538.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00010930 Rroxscaffold_6G00412670 |
| rosa_rugosa | Rorug03G0096100 Rorug03G0096200 Rorug03G0096200 Rorug03G0096200 |
| rosa_samantha | Rh1AG429500 Rh1BG152900 Rh2AG054200 Rh2DG539500 Rh3AG144900 Rh3BG167300 Rh3BG326700 Rh3DG166200 |
| rosa_wichuraiana | Rw3G013660 Rw6G026160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 170 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 23, 202 |
| AjnI | CCWGG | 1 cut(s) | 57 |
| AluBI | AGCT | 1 cut(s) | 84 |
| AluI | AGCT | 1 cut(s) | 84 |
| AspLEI | GCGC | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 3 cut(s) | 82, 155, 205 |
| BbsI | GAAGAC | 1 cut(s) | 137 |
| BciT130I | CCWGG | 1 cut(s) | 59 |
| BfoI | RGCGCY | 1 cut(s) | 14 |
| Bme1390I | CCNGG | 1 cut(s) | 59 |
| BmrFI | CCNGG | 1 cut(s) | 59 |
| BmsI | GCATC | 1 cut(s) | 31 |
| BpiI | GAAGAC | 1 cut(s) | 137 |
| BpuEI | CTTGAG | 1 cut(s) | 185 |
| BsaJI | CCNNGG | 1 cut(s) | 96 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 23, 202 |
| Bse3DI | GCAATG | 1 cut(s) | 168 |
| BseBI | CCWGG | 1 cut(s) | 59 |
| BseDI | CCNNGG | 1 cut(s) | 96 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 23, 202 |
| BseMI | GCAATG | 1 cut(s) | 168 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 23, 202 |
| BsmI | GAATGC | 1 cut(s) | 68 |
| Bsp143I | GATC | 1 cut(s) | 135 |
| BspCNI | CTCAG | 1 cut(s) | 64 |
| BsrDI | GCAATG | 1 cut(s) | 168 |
| BssECI | CCNNGG | 1 cut(s) | 96 |
| BssMI | GATC | 1 cut(s) | 135 |
| Bst2UI | CCWGG | 1 cut(s) | 59 |
| Bst4CI | ACNGT | 2 cut(s) | 55, 143 |
| Bst6I | CTCTTC | 1 cut(s) | 119 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 41 |
| BstDEI | CTNAG | 1 cut(s) | 72 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstH2I | RGCGCY | 1 cut(s) | 14 |
| BstHHI | GCGC | 1 cut(s) | 13 |
| BstKTI | GATC | 1 cut(s) | 138 |
| BstMBI | GATC | 1 cut(s) | 135 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 41 |
| BstNI | CCWGG | 1 cut(s) | 59 |
| BstSCI | CCNGG | 1 cut(s) | 57 |
| BstV2I | GAAGAC | 1 cut(s) | 137 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| CfoI | GCGC | 1 cut(s) | 13 |
| CviJI | RGCY | 2 cut(s) | 84, 177 |
| CviKI_1 | RGCY | 2 cut(s) | 84, 177 |
| DdeI | CTNAG | 1 cut(s) | 72 |
| DpnI | GATC | 1 cut(s) | 137 |
| DpnII | GATC | 1 cut(s) | 135 |
| Eam1104I | CTCTTC | 1 cut(s) | 119 |
| EarI | CTCTTC | 1 cut(s) | 119 |
| EcoRII | CCWGG | 1 cut(s) | 57 |
| FaiI | YATR | 2 cut(s) | 189, 232 |
| FokI | GGATG | 1 cut(s) | 53 |
| GlaI | GCGC | 1 cut(s) | 12 |
| HaeII | RGCGCY | 1 cut(s) | 14 |
| HhaI | GCGC | 1 cut(s) | 13 |
| Hin6I | GCGC | 1 cut(s) | 11 |
| HinP1I | GCGC | 1 cut(s) | 11 |
| HphI | GGTGA | 3 cut(s) | 82, 155, 205 |
| Hpy166II | GTNNAC | 1 cut(s) | 208 |
| Hpy188I | TCNGA | 2 cut(s) | 73, 97 |
| Hpy8I | GTNNAC | 1 cut(s) | 208 |
| HpyAV | CCTTC | 1 cut(s) | 40 |
| HpyCH4III | ACNGT | 2 cut(s) | 55, 143 |
| HpyCH4IV | ACGT | 1 cut(s) | 170 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 41 |
| HpyF3I | CTNAG | 1 cut(s) | 72 |
| HpySE526I | ACGT | 1 cut(s) | 170 |
| HspAI | GCGC | 1 cut(s) | 11 |
| Kzo9I | GATC | 1 cut(s) | 135 |
| LpnPI | CCDG | 5 cut(s) | 30, 44, 71, 128, 142 |
| LweI | GCATC | 1 cut(s) | 31 |
| MaeII | ACGT | 1 cut(s) | 170 |
| MaeIII | GTNAC | 1 cut(s) | 104 |
| MalI | GATC | 1 cut(s) | 137 |
| MboI | GATC | 1 cut(s) | 135 |
| MboII | GAAGA | 3 cut(s) | 16, 136, 142 |
| MnlI | CCTC | 7 cut(s) | 91, 103, 120, 175, 209, 220, 221 |
| MspR9I | CCNGG | 1 cut(s) | 59 |
| Mva1269I | GAATGC | 1 cut(s) | 68 |
| MvaI | CCWGG | 1 cut(s) | 59 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 41 |
| NdeII | GATC | 1 cut(s) | 135 |
| NmuCI | GTSAC | 1 cut(s) | 104 |
| PctI | GAATGC | 1 cut(s) | 68 |
| PfoI | TCCNGGA | 1 cut(s) | 57 |
| Psp1406I | AACGTT | 1 cut(s) | 170 |
| Psp6I | CCWGG | 1 cut(s) | 57 |
| PspGI | CCWGG | 1 cut(s) | 57 |
| Sau3AI | GATC | 1 cut(s) | 135 |
| ScrFI | CCNGG | 1 cut(s) | 59 |
| SetI | ASST | 6 cut(s) | 86, 95, 173, 207, 213, 231 |
| SfaNI | GCATC | 1 cut(s) | 31 |
| SgeI | CNNG | 9 cut(s) | 29, 70, 71, 109, 114, 121, 127, 169, 214 |
| SmlI | CTYRAG | 1 cut(s) | 200 |
| SmoI | CTYRAG | 1 cut(s) | 200 |
| StyD4I | CCNGG | 1 cut(s) | 57 |
| TaaI | ACNGT | 2 cut(s) | 55, 143 |
| TaiI | ACGT | 1 cut(s) | 173 |
| TaqI | TCGA | 1 cut(s) | 192 |
| TseFI | GTSAC | 1 cut(s) | 104 |
| Tsp45I | GTSAC | 1 cut(s) | 104 |
| TspDTI | ATGAA | 3 cut(s) | 17, 67, 76 |
| TspGWI | ACGGA | 1 cut(s) | 39 |