Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001854

Physical Location & Seq

Genomic Coordinates Reverse (-)

7504954 .. 7508785

Gene Structure 3832 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0096100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGAAGTGTCTCTTGTTTGTTTTTCTTTGCTTTACTTCCGCAATCCATTTCATTCTCGCTGCCAATTACATCCCATCTGAAAAAATCTTGCTAAACTGCGGCGGTCCGCCGGAGTCCACCGATTCCGATGGCCTGAAATGGACATCGGATATCGGCTCCAAGTTTGCCTCCGGCCCAAACTCCACCACTTCCCCTGCTGCAACTCAAGACCCTTCAGTCCCTCAAATTCCTTTCATGACTGCCAGGGTCTTTCGTTCTGATTACACTTATAAATTTCCGGTCGCCTCCGGCCGGATGTTTGTTCGTCTTTTCTTTTATCCGGCCTCCTACGCCGGACTCAATGCCTCCGATGCTGTCTTTTCTGTCATGGTTGAGTCCTATACTGTTCTCAAAAACTTCAGTGTTGTCCAGACCACTGAGGCTTTAACTTACTCCGTTGTTACCAAGGAGTATGTGGTCAATGTTGAAGGAGAGTCTCTGAATGTCACTTTTAAGCCCTCTGGTAGTGTTGCGAATGCGTATGCCTTTGTGAATGGGATCGAGATTGTGTCCATGCCGGATATCTATAGTTCTCCCGATGGCGCTATGATTGTGGGACAGTCGACTGCTTACACTATTGATAATAGCACGGCACTGGAGAATGTTTATAGGTTGAATGTGGGTGGAAAAGATATATCGCCGAGTCAGGATACTGGTCTGCTTAGGTCTTGGTATGATGACACTGCTTATCTGTTTGGAGCAGCCTTTGGTGTTGCAGAGTTTGCTGAGGGCAACGTGTCCATTACTTACCCTAAGTCCATGCCTACTTATGTTGCACCAGCTGATGTCTATTCCACAGCCAGGTCTATGGGGCCGAATAACAACATCAACCTCAACTACAATTTGTCTTGGGTGTTTTCGATTGATTCTGGATTTTCATACCTTGTGAGGCTACATTTCTGTGAGGTTGCTGCAAACATAACCAAGCAGAACCAGAGAGTGTTTGATATCTATCTCAATAATCAAACCGCCGAGTCTGCGTTTGATGTTGCTGCATTTACAGGAGGGAATGGAATACCGGCATACAGAGATTATGTGGTACAAGTTCCAAATGGGAGCCCGCAGGAGGATCTATGGCTTGCACTGCATCCAGATCGTACTGATAAACCACAATGGTATGATGCAATCCTAAATGGAGTCGAGATCTTCAAGATCAGTGATACTACTGGCAATCTTGGAGGGCCTAATCCTATTCCCCGTCCCATGCAGGAGAACATTGATCCATCTAAGGTTAGAACTGGATCAGGTCATGGTAAGCATAAGAGTAATAACCAGAAAGCAATTATTGCCGGGGGAGTTAGTGGTGGAATTGTCTTGGCCCTTGTCCTTGGTTTCTTTGCTATTTGCGTGTCACGCCGCCGTAGACAACCGAAGGACTCAAGTGCAAGTGAAGGGCCATCTGGTTGGCTCCCTCTGTCTTTGTATTCACAATCTGCAAGTTCTGCCAAGACAAACACAACACGAAGTTGTGCTTCCTCCCTCCCATCAAACCTCTGTCGTCACTTCTCATTTGCTGAGATCAAAGCAGCTACTAACAACTTTGAAGAGGCTCGACTCCTTGGGGTGGGAGGTTTTGGAAAAGTATACAAGGGTGACATTGATGGTGGAACAACCAAAGTAGCCATTAAGCGTGGAAACCCACTCTCTGATCAAGGTGTGCATGAATTTCAGACTGAGATTGAAATGCTCTCAAAGCTTCGTCATCGTCATCTTGTTTCACTGATTGGCTACTGTGAAGATAACTCTGAAATGATTCTTGTATACGATTACATGGCTTTTGGAACCCTGCGTGAGCATCTGTACAAGACCCAAAAGCCGCCACTCCCCTGGAAGCAAAGGCTTGAGATTTGTATTGGAGCTGCTCGTGGTTTACACTACCTTCATACTGGTGCCAAGCACACAATCATCCACAGAGATGTTAAGACAACTAACATTCTGTTAGATGAAAAGTGGGTTGCAAAGGTCTCAGACTTTGGCTTGTCCAAAACAGGTCCTACATTGGATAACACTCATGTCAGCACTGTTGTCAAAGGTAGCTTTGGGTATCTGGATCCGGAGTACTTTAGGCGGCAACAGCTGACTGACAAGTCTGATGTGTATTCGTTCGGAGTTGTCCTTTTTGAGATCTTATGTGCTCGCCCAGCCTTGAACCCCACGCTTCCAAAGGAGCAAGTGAGCTTAGCAGAGTGGGCTGCACATTGCCACAAGAAAGGCATGCTTGATCAGATCCTCGATCCTTATCTCAAGGGGAAGATCACACCTGAATGTTTCAGAAAGTTTGCAGAGACAGCAATGAAGTGTGTGTCAGACCAGAGCATTGACAGGCCATCAATGGGAGATGTTCTCTGGAACCTGGAGTTTGCATTGCAGCTACAGGAGAGTGCAGAAGAGACTGGCCAGGGTATTGGAATGGACATGGAGGAAGAGCCCTTCATGGCCTGTAAAGGGAAGAAGGACCTGGATGCATCACCAGGGTTCGATGGCAATGTGACAGACTCGAGGAGCAGTGGCATCAGCATGAGCATAGGTGGTCGCAGCCTGGCTAGTGACGATTCTGATGGACTGACACCAAGTGCTGTGTTCTCACAGATCATGAACCCAAAGGGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006082 GO:0006355 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016143 GO:0019219 GO:0019222 GO:0019748 GO:0019757 GO:0019760 GO:0031323 GO:0031326 GO:0043436 GO:0043565 GO:0044237 GO:0044281 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901135 GO:1901363 GO:1901564 GO:1901657 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04612 ko05152 ko05166 map04612 map05152 map05166

Pfam Domains

Protein Families

CBFD_NFYB_HMF

Protein Analysis

883

Amino Acids

96.62

Weight (kDa)

5.99

Isoelectric Point (pI)

42.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	31 - 398	2.8e-36	Malectin-like domain
Malectin	PF11721	31 - 166	1.7e-09	Malectin domain
Malectin	PF11721	237 - 365	7.2e-11	Malectin domain
Pkinase	PF00069	527 - 791	5.7e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	531 - 795	1e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001854)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37060 AT2G37060 AT2G37060 AT3G53340 AT3G53340 AT3G53340 AT3G53340 AT3G53340
fragaria_vesca	FvH4_6g15260 FvH4_6g15260 FvH4_6g15260 FvH4_6g15260 FvH4_6g15260
malus_domestica	MD04G1104700.v1.1 MD12G1124800.v1.1
prunus_persica	Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1 Prupe.6G241800_v2.0.a1
pyrus_communis	pycom04g09970 pycom12g12320
rosa_chinensis	RchiOBHm_Chr2g0145071 RchiOBHm_Chr3g0468661 RchiOBHm_Chr5g0066261
rosa_laevigata	RLG00000024032 RLG00000024417
rosa_multiflora	Rmu_co8446349.1_g000001 Rmu_sc0009516.1_g000001 Rmu_sc0011538.1_g000009
rosa_roxburghii	Rroxscaffold_1G00010930 Rroxscaffold_6G00412670
rosa_rugosa	Rorug03G0096100 Rorug03G0096200 Rorug03G0096200 Rorug03G0096200
rosa_samantha	Rh1AG429500 Rh1BG152900 Rh2AG054200 Rh2DG539500 Rh3AG144900 Rh3BG167300 Rh3BG326700 Rh3DG166200
rosa_wichuraiana	Rw3G013660 Rw6G026160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	270
AasI	GACNNNNNNGTC	2 cut(s)	215, 2125
AccB1I	GGYRCC	1 cut(s)	1928
AccI	GTMKAC	4 cut(s)	602, 1402, 1623, 1800
AccIII	TCCGGA	1 cut(s)	2092
AciI	CCGC	9 cut(s)	39, 99, 102, 107, 1008, 1100, 1396, 1856, 2107
AclWI	GGATC	8 cut(s)	545, 1116, 1253, 1288, 2084, 2097, 2260, 2267
AcoI	YGGCCR	2 cut(s)	289, 2434
AcsI	RAATTY	3 cut(s)	225, 272, 1703
AcuI	CTGAAG	2 cut(s)	198, 382
AdeI	CACNNNGTG	1 cut(s)	2612
AfaI	GTAC	4 cut(s)	1080, 1138, 1841, 2099
AfiI	CCNNNNNNNGG	6 cut(s)	291, 840, 1105, 1603, 2372, 2484
AflIII	ACRYGT	1 cut(s)	774
AgsI	TTSAA	6 cut(s)	467, 655, 1189, 1583, 1721, 2188
AjnI	CCWGG	8 cut(s)	242, 839, 1865, 2391, 2436, 2496, 2509, 2577
AluBI	AGCT	8 cut(s)	821, 1568, 1735, 1898, 2076, 2116, 2217, 2410
AluI	AGCT	8 cut(s)	821, 1568, 1735, 1898, 2076, 2116, 2217, 2410
Alw21I	GWGCWC	1 cut(s)	2176
Alw26I	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
AlwI	GGATC	8 cut(s)	545, 1116, 1253, 1288, 2084, 2097, 2260, 2267
Ama87I	CYCGRG	1 cut(s)	2536
Aor13HI	TCCGGA	1 cut(s)	2092
ApoI	RAATTY	3 cut(s)	225, 272, 1703
Asp700I	GAANNNNTTC	1 cut(s)	1791
AspLEI	GCGC	1 cut(s)	584
AspS9I	GGNCC	8 cut(s)	104, 173, 851, 1220, 1357, 1433, 2030, 2494
AsuC2I	CCSGG	1 cut(s)	1330
AsuHPI	GGTGA	2 cut(s)	1643, 2499
AvaI	CYCGRG	1 cut(s)	2536
AvaII	GGWCC	3 cut(s)	104, 2030, 2494
BalI	TGGCCA	1 cut(s)	2436
BamHI	GGATCC	1 cut(s)	2089
BanI	GGYRCC	1 cut(s)	1928
BanII	GRGCYC	2 cut(s)	1100, 2469
BauI	CACGAG	1 cut(s)	1902
Bbv12I	GWGCWC	1 cut(s)	2176
BbvCI	CCTCAGC	1 cut(s)	765
BceAI	ACGGC	2 cut(s)	645, 1383
BcgI	CGANNNNNNTGC	2 cut(s)	1115, 1149
BciT130I	CCWGG	8 cut(s)	244, 841, 1867, 2393, 2438, 2498, 2511, 2579
BciVI	GTATCC	1 cut(s)	682
BclI	TGATCA	2 cut(s)	1687, 2260
BcnI	CCSGG	1 cut(s)	1330
BcoDI	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
BfaI	CTAG	1 cut(s)	2583
BfmI	CTRYAG	2 cut(s)	565, 2411
BfoI	RGCGCY	1 cut(s)	585
BfuI	GTATCC	1 cut(s)	682
BglII	AGATCT	2 cut(s)	1182, 2163
BlpI	GCTNAGC	1 cut(s)	2218
BmcAI	AGTACT	1 cut(s)	2099
Bme1390I	CCNGG	9 cut(s)	244, 841, 1330, 1867, 2393, 2438, 2498, 2511, 2579
Bme18I	GGWCC	3 cut(s)	104, 2030, 2494
BmeT110I	CYCGRG	1 cut(s)	2536
BmgT120I	GGNCC	8 cut(s)	104, 173, 851, 1220, 1357, 1433, 2030, 2494
BmiI	GGNNCC	8 cut(s)	157, 852, 1097, 1448, 1822, 1930, 2091, 2390
BmrFI	CCNGG	9 cut(s)	244, 841, 1330, 1867, 2393, 2438, 2498, 2511, 2579
BmsI	GCATC	7 cut(s)	340, 1135, 1150, 1843, 2491, 2513, 2559
BplI	GAGNNNNNCTC	2 cut(s)	2367, 2399
BpmI	CTGGAG	2 cut(s)	656, 2414
Bpu10I	CCTNAGC	2 cut(s)	701, 765
Bpu1102I	GCTNAGC	1 cut(s)	2218
BpuEI	CTTGAG	4 cut(s)	189, 1402, 1901, 2267
BpuMI	CCSGG	1 cut(s)	1330
BsaBI	GATNNNNATC	2 cut(s)	990, 2277
BsaI	GGTCTC	1 cut(s)	2008
BsaJI	CCNNGG	8 cut(s)	243, 444, 1329, 1366, 1597, 1865, 2437, 2510
BsaWI	WCCGGW	2 cut(s)	277, 2092
Bsc4I	CCNNNNNNNGG	6 cut(s)	291, 840, 1105, 1603, 2372, 2484
Bse118I	RCCGGY	1 cut(s)	1057
Bse1I	ACTGG	6 cut(s)	639, 697, 1210, 1282, 1930, 2437
Bse3DI	GCAATG	4 cut(s)	2236, 2337, 2402, 2530
Bse8I	GATNNNNATC	2 cut(s)	990, 2277
BseAI	TCCGGA	1 cut(s)	2092
BseBI	CCWGG	8 cut(s)	244, 841, 1867, 2393, 2438, 2498, 2511, 2579
BseDI	CCNNGG	8 cut(s)	243, 444, 1329, 1366, 1597, 1865, 2437, 2510
BseGI	GGATG	5 cut(s)	69, 300, 1126, 1944, 2506
BseJI	GATNNNNATC	2 cut(s)	990, 2277
BseLI	CCNNNNNNNGG	6 cut(s)	291, 840, 1105, 1603, 2372, 2484
BseMI	GCAATG	4 cut(s)	2236, 2337, 2402, 2530
BseMII	CTCAG	5 cut(s)	408, 756, 1545, 1704, 2019
BseNI	ACTGG	6 cut(s)	639, 697, 1210, 1282, 1930, 2437
BseRI	GAGGAG	1 cut(s)	2554
BseX3I	CGGCCG	1 cut(s)	289
BseYI	CCCAGC	1 cut(s)	2179
BsgI	GTGCAG	2 cut(s)	2217, 2442
Bsh1285I	CGRYCG	2 cut(s)	282, 292
BshNI	GGYRCC	1 cut(s)	1928
BsiEI	CGRYCG	2 cut(s)	282, 292
BsiHKAI	GWGCWC	1 cut(s)	2176
BsiHKCI	CYCGRG	1 cut(s)	2536
BslFI	GGGAC	3 cut(s)	203, 609, 1224
BslI	CCNNNNNNNGG	6 cut(s)	291, 840, 1105, 1603, 2372, 2484
BsmAI	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
BsmFI	GGGAC	3 cut(s)	203, 609, 1224
BsmI	GAATGC	1 cut(s)	520
Bso31I	GGTCTC	1 cut(s)	2008
BsoBI	CYCGRG	1 cut(s)	2536
Bsp1286I	GDGCHC	3 cut(s)	1100, 2176, 2469
Bsp13I	TCCGGA	1 cut(s)	2092
Bsp1407I	TGTACA	1 cut(s)	1839
Bsp1720I	GCTNAGC	1 cut(s)	2218
BspACI	CCGC	9 cut(s)	39, 99, 102, 107, 1008, 1100, 1396, 1856, 2107
BspCNI	CTCAG	5 cut(s)	409, 757, 1546, 1705, 2018
BspEI	TCCGGA	1 cut(s)	2092
BspHI	TCATGA	2 cut(s)	234, 2631
BspLI	GGNNCC	8 cut(s)	157, 852, 1097, 1448, 1822, 1930, 2091, 2390
BspPI	GGATC	8 cut(s)	545, 1116, 1253, 1288, 2084, 2097, 2260, 2267
BspQI	GCTCTTC	1 cut(s)	2457
BspT107I	GGYRCC	1 cut(s)	1928
BspTNI	GGTCTC	1 cut(s)	2008
BsrDI	GCAATG	4 cut(s)	2236, 2337, 2402, 2530
BsrFI	RCCGGY	1 cut(s)	1057
BsrGI	TGTACA	1 cut(s)	1839
BsrI	ACTGG	6 cut(s)	639, 697, 1210, 1282, 1930, 2437
BssAI	RCCGGY	1 cut(s)	1057
BssECI	CCNNGG	8 cut(s)	243, 444, 1329, 1366, 1597, 1865, 2437, 2510
BssNAI	GTATAC	2 cut(s)	1624, 1801
BssSI	CACGAG	1 cut(s)	1902
BssT1I	CCWWGG	3 cut(s)	444, 1366, 1597
Bst1107I	GTATAC	2 cut(s)	1624, 1801
Bst2BI	CACGAG	1 cut(s)	1902
Bst2UI	CCWGG	8 cut(s)	244, 841, 1867, 2393, 2438, 2498, 2511, 2579
Bst4CI	ACNGT	4 cut(s)	385, 600, 1772, 2062
Bst6I	CTCTTC	3 cut(s)	1578, 2421, 2457
BstAPI	GCANNNNNTGC	3 cut(s)	761, 1325, 1481
BstAUI	TGTACA	1 cut(s)	1839
BstC8I	GCNNGC	4 cut(s)	1100, 1119, 2176, 2255
BstDEI	CTNAG	9 cut(s)	417, 701, 765, 792, 1266, 1554, 1713, 2005, 2218
BstF5I	GGATG	5 cut(s)	69, 300, 1126, 1944, 2506
BstH2I	RGCGCY	1 cut(s)	585
BstHHI	GCGC	1 cut(s)	584
BstMAI	GTCTC	5 cut(s)	14, 480, 2008, 2318, 2423
BstMCI	CGRYCG	2 cut(s)	282, 292
BstNI	CCWGG	8 cut(s)	244, 841, 1867, 2393, 2438, 2498, 2511, 2579
BstNSI	RCATGY	1 cut(s)	2257
BstSCI	CCNGG	9 cut(s)	242, 839, 1328, 1865, 2391, 2436, 2496, 2509, 2577
BstSFI	CTRYAG	2 cut(s)	565, 2411
BstX2I	RGATCY	5 cut(s)	1108, 1182, 2089, 2163, 2265
BstXI	CCANNNNNNTGG	4 cut(s)	847, 1443, 1866, 2444
BstYI	RGATCY	5 cut(s)	1108, 1182, 2089, 2163, 2265
BstZ17I	GTATAC	2 cut(s)	1624, 1801
BstZI	CGGCCG	1 cut(s)	289
BsuI	GTATCC	1 cut(s)	682
BtsCI	GGATG	5 cut(s)	69, 300, 1126, 1944, 2506
BtsI	GCAGTG	3 cut(s)	720, 1121, 2551
BtsIMutI	CAGTG	9 cut(s)	406, 414, 632, 720, 1121, 1201, 1757, 2058, 2551
Cac8I	GCNNGC	4 cut(s)	1100, 1119, 2176, 2255
CciI	TCATGA	2 cut(s)	234, 2631
CfoI	GCGC	1 cut(s)	584
Cfr10I	RCCGGY	1 cut(s)	1057
Cfr13I	GGNCC	8 cut(s)	104, 173, 851, 1220, 1357, 1433, 2030, 2494
CpoI	CGGWCCG	1 cut(s)	104
Csp6I	GTAC	4 cut(s)	1079, 1137, 1840, 2098
CspI	CGGWCCG	1 cut(s)	104
CviQI	GTAC	4 cut(s)	1079, 1137, 1840, 2098
DdeI	CTNAG	9 cut(s)	417, 701, 765, 792, 1266, 1554, 1713, 2005, 2218
DraIII	CACNNNGTG	1 cut(s)	2612
DrdI	GACNNNNNNGTC	2 cut(s)	215, 2125
DseDI	GACNNNNNNGTC	2 cut(s)	215, 2125
EaeI	YGGCCR	2 cut(s)	289, 2434
EagI	CGGCCG	1 cut(s)	289
Eam1104I	CTCTTC	3 cut(s)	1578, 2421, 2457
EarI	CTCTTC	3 cut(s)	1578, 2421, 2457
EciI	GGCGGA	1 cut(s)	96
EclXI	CGGCCG	1 cut(s)	289
Eco130I	CCWWGG	3 cut(s)	444, 1366, 1597
Eco24I	GRGCYC	2 cut(s)	1100, 2469
Eco31I	GGTCTC	1 cut(s)	2008
Eco32I	GATATC	3 cut(s)	151, 562, 988
Eco47I	GGWCC	3 cut(s)	104, 2030, 2494
Eco52I	CGGCCG	1 cut(s)	289
Eco57I	CTGAAG	2 cut(s)	198, 382
Eco88I	CYCGRG	1 cut(s)	2536
EcoO109I	RGGNCCY	3 cut(s)	1220, 2030, 2494
EcoRII	CCWGG	8 cut(s)	242, 839, 1865, 2391, 2436, 2496, 2509, 2577
EcoRV	GATATC	3 cut(s)	151, 562, 988
EcoT14I	CCWWGG	3 cut(s)	444, 1366, 1597
EcoT22I	ATGCAT	1 cut(s)	2506
EcoT38I	GRGCYC	2 cut(s)	1100, 2469
ErhI	CCWWGG	3 cut(s)	444, 1366, 1597
FalI	AAGNNNNNCTT	5 cut(s)	28, 1495, 1527, 2241, 2273
FaqI	GGGAC	3 cut(s)	203, 609, 1224
FauI	CCCGC	1 cut(s)	1107
FbaI	TGATCA	2 cut(s)	1687, 2260
FblI	GTMKAC	4 cut(s)	602, 1402, 1623, 1800
FokI	GGATG	5 cut(s)	56, 307, 1113, 1931, 2513
FriOI	GRGCYC	2 cut(s)	1100, 2469
FspBI	CTAG	1 cut(s)	2583
GlaI	GCGC	1 cut(s)	583
GsaI	CCCAGC	1 cut(s)	2183
GsuI	CTGGAG	2 cut(s)	656, 2414
HaeII	RGCGCY	1 cut(s)	585
HhaI	GCGC	1 cut(s)	584
Hin6I	GCGC	1 cut(s)	582
HinP1I	GCGC	1 cut(s)	582
HincII	GTYRAC	1 cut(s)	603
HindII	GTYRAC	1 cut(s)	603
HindIII	AAGCTT	1 cut(s)	1733
HphI	GGTGA	2 cut(s)	1643, 2499
Hpy166II	GTNNAC	6 cut(s)	117, 603, 1403, 1624, 1801, 1910
Hpy8I	GTNNAC	6 cut(s)	117, 603, 1403, 1624, 1801, 1910
HpyAV	CCTTC	7 cut(s)	222, 461, 1405, 1424, 1928, 2479, 2485
HpyCH4III	ACNGT	4 cut(s)	385, 600, 1772, 2062
HpyCH4IV	ACGT	2 cut(s)	774, 2647
HpyF3I	CTNAG	9 cut(s)	417, 701, 765, 792, 1266, 1554, 1713, 2005, 2218
HpySE526I	ACGT	2 cut(s)	774, 2647
HspAI	GCGC	1 cut(s)	582
Kpn2I	TCCGGA	1 cut(s)	2092
Ksp22I	TGATCA	2 cut(s)	1687, 2260
LguI	GCTCTTC	1 cut(s)	2457
LmnI	GCTCC	7 cut(s)	161, 737, 1095, 1452, 1895, 2206, 2541
LweI	GCATC	7 cut(s)	340, 1135, 1150, 1843, 2491, 2513, 2559
MaeI	CTAG	1 cut(s)	2583
MaeII	ACGT	2 cut(s)	774, 2647
MaeIII	GTNAC	7 cut(s)	439, 484, 1389, 1538, 1631, 2527, 2585
MboII	GAAGA	7 cut(s)	1177, 1595, 1787, 2302, 2438, 2474, 2500
MflI	RGATCY	5 cut(s)	1108, 1182, 2089, 2163, 2265
MhlI	GDGCHC	3 cut(s)	1100, 2176, 2469
MlsI	TGGCCA	1 cut(s)	2436
MluCI	AATT	7 cut(s)	64, 225, 272, 880, 1320, 1347, 1703
MluNI	TGGCCA	1 cut(s)	2436
Mox20I	TGGCCA	1 cut(s)	2436
Mph1103I	ATGCAT	1 cut(s)	2506
MroI	TCCGGA	1 cut(s)	2092
MroXI	GAANNNNTTC	1 cut(s)	1791
MscI	TGGCCA	1 cut(s)	2436
MseI	TTAA	4 cut(s)	425, 492, 1665, 1959
MslI	CAYNNNNRTG	5 cut(s)	939, 1926, 1953, 2302, 2555
Msp20I	TGGCCA	1 cut(s)	2436
MspA1I	CMGCKG	2 cut(s)	821, 2116
MspR9I	CCNGG	9 cut(s)	244, 841, 1330, 1867, 2393, 2438, 2498, 2511, 2579
Mva1269I	GAATGC	1 cut(s)	520
MvaI	CCWGG	8 cut(s)	244, 841, 1867, 2393, 2438, 2498, 2511, 2579
NciI	CCSGG	1 cut(s)	1330
NlaIV	GGNNCC	8 cut(s)	157, 852, 1097, 1448, 1822, 1930, 2091, 2390
NmeAIII	GCCGAG	2 cut(s)	705, 1036
NmuCI	GTSAC	6 cut(s)	484, 1389, 1538, 1631, 2527, 2585
NsiI	ATGCAT	1 cut(s)	2506
NspI	RCATGY	1 cut(s)	2257
PaeI	GCATGC	1 cut(s)	2257
PaeR7I	CTCGAG	1 cut(s)	2536
PagI	TCATGA	2 cut(s)	234, 2631
PciSI	GCTCTTC	1 cut(s)	2457
PctI	GAATGC	1 cut(s)	520
PdmI	GAANNNNTTC	1 cut(s)	1791
PfeI	GAWTC	4 cut(s)	122, 905, 1792, 2591
PpuMI	RGGWCCY	2 cut(s)	2030, 2494
PsiI	TTATAA	1 cut(s)	270
Psp5II	RGGWCCY	2 cut(s)	2030, 2494
Psp6I	CCWGG	8 cut(s)	242, 839, 1865, 2391, 2436, 2496, 2509, 2577
PspFI	CCCAGC	1 cut(s)	2179
PspGI	CCWGG	8 cut(s)	242, 839, 1865, 2391, 2436, 2496, 2509, 2577
PspN4I	GGNNCC	8 cut(s)	157, 852, 1097, 1448, 1822, 1930, 2091, 2390
PspPI	GGNCC	8 cut(s)	104, 173, 851, 1220, 1357, 1433, 2030, 2494
PspPPI	RGGWCCY	2 cut(s)	2030, 2494
PspXI	VCTCGAGB	1 cut(s)	2536
PsuI	RGATCY	5 cut(s)	1108, 1182, 2089, 2163, 2265
PvuII	CAGCTG	2 cut(s)	821, 2116
RsaI	GTAC	4 cut(s)	1080, 1138, 1841, 2099
RsaNI	GTAC	4 cut(s)	1079, 1137, 1840, 2098
RseI	CAYNNNNRTG	5 cut(s)	939, 1926, 1953, 2302, 2555
Rsr2I	CGGWCCG	1 cut(s)	104
RsrII	CGGWCCG	1 cut(s)	104
SalI	GTCGAC	1 cut(s)	601
SapI	GCTCTTC	1 cut(s)	2457
SaqAI	TTAA	4 cut(s)	425, 492, 1665, 1959
Sau96I	GGNCC	8 cut(s)	104, 173, 851, 1220, 1357, 1433, 2030, 2494
ScaI	AGTACT	1 cut(s)	2099
ScrFI	CCNGG	9 cut(s)	244, 841, 1330, 1867, 2393, 2438, 2498, 2511, 2579
SduI	GDGCHC	3 cut(s)	1100, 2176, 2469
SfaNI	GCATC	7 cut(s)	340, 1135, 1150, 1843, 2491, 2513, 2559
SfcI	CTRYAG	2 cut(s)	565, 2411
Sfr274I	CTCGAG	1 cut(s)	2536
SinI	GGWCC	3 cut(s)	104, 2030, 2494
SlaI	CTCGAG	1 cut(s)	2536
SmiMI	CAYNNNNRTG	5 cut(s)	939, 1926, 1953, 2302, 2555
SmlI	CTYRAG	5 cut(s)	204, 1417, 1880, 2282, 2536
SmoI	CTYRAG	5 cut(s)	204, 1417, 1880, 2282, 2536
SphI	GCATGC	1 cut(s)	2257
Sse9I	AATT	7 cut(s)	64, 225, 272, 880, 1320, 1347, 1703
SsiI	CCGC	9 cut(s)	39, 99, 102, 107, 1008, 1100, 1396, 1856, 2107
SspMI	CTAG	1 cut(s)	2583
StyD4I	CCNGG	9 cut(s)	242, 839, 1328, 1865, 2391, 2436, 2496, 2509, 2577
StyI	CCWWGG	3 cut(s)	444, 1366, 1597
TaaI	ACNGT	4 cut(s)	385, 600, 1772, 2062
TaiI	ACGT	2 cut(s)	777, 2650
TaqI	TCGA	8 cut(s)	540, 602, 899, 1179, 1591, 2271, 2517, 2537
TasI	AATT	7 cut(s)	64, 225, 272, 880, 1320, 1347, 1703
TatI	WGTACW	2 cut(s)	1839, 2097
TauI	GCSGC	4 cut(s)	102, 1398, 1858, 2110
TfiI	GAWTC	4 cut(s)	122, 905, 1792, 2591
Tru1I	TTAA	4 cut(s)	425, 492, 1665, 1959
Tru9I	TTAA	4 cut(s)	425, 492, 1665, 1959
TscAI	CASTG	9 cut(s)	406, 421, 639, 727, 1128, 1201, 1764, 2065, 2551
TseFI	GTSAC	6 cut(s)	484, 1389, 1538, 1631, 2527, 2585
Tsp45I	GTSAC	6 cut(s)	484, 1389, 1538, 1631, 2527, 2585
TspGWI	ACGGA	1 cut(s)	424
TspRI	CASTG	9 cut(s)	406, 421, 639, 727, 1128, 1201, 1764, 2065, 2551
VpaK11BI	GGWCC	3 cut(s)	104, 2030, 2494
XapI	RAATTY	3 cut(s)	225, 272, 1703
XceI	RCATGY	1 cut(s)	2257
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XhoI	CTCGAG	1 cut(s)	2536
XmiI	GTMKAC	4 cut(s)	602, 1402, 1623, 1800
XmnI	GAANNNNTTC	1 cut(s)	1791
XspI	CTAG	1 cut(s)	2583
ZrmI	AGTACT	1 cut(s)	2099
Zsp2I	ATGCAT	1 cut(s)	2506

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.