Belongs to the histone H2A family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G08880 AT1G54690 |
| fragaria_vesca | FvH4_2g24430 FvH4_2g24440 FvH4_6g04950 |
| malus_domestica | MD03G1273800.v1.1 MD03G1273900.v1.1 MD04G1212600.v1.1 MD11G1296200.v1.1 MD12G1227300.v1.1 MD17G1159100.v1.1 |
| prunus_persica | Prupe.6G332900_v2.0.a1 Prupe.8G250000_v2.0.a1 Prupe.8G250100_v2.0.a1 |
| pyrus_communis | pycom03g21800 pycom03g21810 pycom04g18860 pycom12g21210 pycom14g01910 |
| rosa_chinensis | RchiOBHm_Chr3g0453441 RchiOBHm_Chr6g0292261 RchiOBHm_Chr6g0292281 |
| rosa_laevigata | RLG00000012046 RLG00000012047 RLG00000025514 |
| rosa_multiflora | Rmu_co8413311.1_g000001 Rmu_sc0002993.1_g000016 Rmu_sc0037544.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00430410 Rroxscaffold_7G00175250 Rroxscaffold_7G00175270 |
| rosa_rugosa | Rorug02G0649100 Rorug06G0225000 Rorug06G0225100 |
| rosa_samantha | Rh3BG053300 Rh3CG052600 Rh3DG053400 Rh6AG338300 Rh6AG338500 Rh6CG352500 Rh6CG352700 Rh6DG338500 |
| rosa_wichuraiana | Rw3G003990 Rw6G029440 Rw6G029460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 152 |
| AccI | GTMKAC | 1 cut(s) | 23 |
| AccII | CGCG | 1 cut(s) | 161 |
| AciI | CCGC | 5 cut(s) | 177, 198, 250, 278, 408 |
| AclWI | GGATC | 3 cut(s) | 116, 399, 412 |
| AfaI | GTAC | 2 cut(s) | 137, 258 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 277 |
| AgsI | TTSAA | 1 cut(s) | 92 |
| AluBI | AGCT | 4 cut(s) | 214, 274, 298, 307 |
| AluI | AGCT | 4 cut(s) | 214, 274, 298, 307 |
| Alw21I | GWGCWC | 1 cut(s) | 186 |
| AlwI | GGATC | 3 cut(s) | 116, 399, 412 |
| AoxI | GGCC | 2 cut(s) | 51, 81 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 50, 82 |
| AscI | GGCGCGCC | 1 cut(s) | 159 |
| AspLEI | GCGC | 2 cut(s) | 161, 163 |
| AsuC2I | CCSGG | 1 cut(s) | 115 |
| BamHI | GGATCC | 1 cut(s) | 404 |
| BanI | GGYRCC | 1 cut(s) | 152 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| Bbv12I | GWGCWC | 1 cut(s) | 186 |
| BbvCI | CCTCAGC | 1 cut(s) | 201 |
| BbvI | GCAGC | 1 cut(s) | 214 |
| BceAI | ACGGC | 1 cut(s) | 164 |
| BcnI | CCSGG | 1 cut(s) | 115 |
| BisI | GCNGC | 2 cut(s) | 198, 228 |
| BlpI | GCTNAGC | 1 cut(s) | 299 |
| BlsI | GCNGC | 2 cut(s) | 199, 229 |
| Bme1390I | CCNGG | 1 cut(s) | 115 |
| BmiI | GGNNCC | 3 cut(s) | 119, 154, 406 |
| BmrFI | CCNGG | 1 cut(s) | 115 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| Bpu10I | CCTNAGC | 1 cut(s) | 201 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 299 |
| BpuEI | CTTGAG | 1 cut(s) | 107 |
| BpuMI | CCSGG | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 2 cut(s) | 27, 260 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 277 |
| Bse118I | RCCGGY | 2 cut(s) | 83, 155 |
| Bse3DI | GCAATG | 1 cut(s) | 324 |
| BseDI | CCNNGG | 2 cut(s) | 27, 260 |
| BseGI | GGATG | 1 cut(s) | 267 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 277 |
| BseMI | GCAATG | 1 cut(s) | 324 |
| BseMII | CTCAG | 2 cut(s) | 192, 290 |
| BsePI | GCGCGC | 1 cut(s) | 159 |
| BseRI | GAGGAG | 2 cut(s) | 308, 351 |
| BseXI | GCAGC | 1 cut(s) | 214 |
| Bsh1236I | CGCG | 1 cut(s) | 161 |
| BshFI | GGCC | 2 cut(s) | 53, 83 |
| BshNI | GGYRCC | 1 cut(s) | 152 |
| BsiHKAI | GWGCWC | 1 cut(s) | 186 |
| BsiSI | CCGG | 3 cut(s) | 84, 115, 156 |
| BslFI | GGGAC | 1 cut(s) | 248 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 277 |
| BsmFI | GGGAC | 1 cut(s) | 248 |
| BsnI | GGCC | 2 cut(s) | 53, 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 186 |
| Bsp143I | GATC | 2 cut(s) | 108, 404 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 299 |
| BspACI | CCGC | 5 cut(s) | 177, 198, 250, 278, 408 |
| BspANI | GGCC | 2 cut(s) | 53, 83 |
| BspCNI | CTCAG | 2 cut(s) | 193, 291 |
| BspFNI | CGCG | 1 cut(s) | 161 |
| BspLI | GGNNCC | 3 cut(s) | 119, 154, 406 |
| BspPI | GGATC | 3 cut(s) | 116, 399, 412 |
| BspT107I | GGYRCC | 1 cut(s) | 152 |
| BsrDI | GCAATG | 1 cut(s) | 324 |
| BsrFI | RCCGGY | 2 cut(s) | 83, 155 |
| BssAI | RCCGGY | 2 cut(s) | 83, 155 |
| BssECI | CCNNGG | 2 cut(s) | 27, 260 |
| BssHII | GCGCGC | 1 cut(s) | 159 |
| BssMI | GATC | 2 cut(s) | 108, 404 |
| BssT1I | CCWWGG | 2 cut(s) | 27, 260 |
| BstC8I | GCNNGC | 6 cut(s) | 44, 157, 161, 216, 276, 305 |
| BstDEI | CTNAG | 4 cut(s) | 201, 299, 372, 414 |
| BstF5I | GGATG | 1 cut(s) | 267 |
| BstFNI | CGCG | 1 cut(s) | 161 |
| BstHHI | GCGC | 2 cut(s) | 161, 163 |
| BstKTI | GATC | 2 cut(s) | 111, 407 |
| BstMBI | GATC | 2 cut(s) | 108, 404 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 224, 271, 304 |
| BstSCI | CCNGG | 1 cut(s) | 113 |
| BstUI | CGCG | 1 cut(s) | 161 |
| BstV1I | GCAGC | 1 cut(s) | 214 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 404 |
| BstYI | RGATCY | 1 cut(s) | 404 |
| BsuRI | GGCC | 2 cut(s) | 53, 83 |
| BtsCI | GGATG | 1 cut(s) | 267 |
| BtsI | GCAGTG | 1 cut(s) | 324 |
| BtsIMutI | CAGTG | 1 cut(s) | 324 |
| Cac8I | GCNNGC | 6 cut(s) | 44, 157, 161, 216, 276, 305 |
| CfoI | GCGC | 2 cut(s) | 161, 163 |
| Cfr10I | RCCGGY | 2 cut(s) | 83, 155 |
| CseI | GACGC | 1 cut(s) | 9 |
| Csp6I | GTAC | 2 cut(s) | 136, 257 |
| CviJI | RGCY | 7 cut(s) | 46, 53, 83, 214, 274, 298, 307 |
| CviKI_1 | RGCY | 7 cut(s) | 46, 53, 83, 214, 274, 298, 307 |
| CviQI | GTAC | 2 cut(s) | 136, 257 |
| DdeI | CTNAG | 4 cut(s) | 201, 299, 372, 414 |
| DpnI | GATC | 2 cut(s) | 110, 406 |
| DpnII | GATC | 2 cut(s) | 108, 404 |
| EciI | GGCGGA | 2 cut(s) | 166, 397 |
| Eco130I | CCWWGG | 2 cut(s) | 27, 260 |
| Eco147I | AGGCCT | 1 cut(s) | 53 |
| Eco32I | GATATC | 1 cut(s) | 400 |
| EcoRV | GATATC | 1 cut(s) | 400 |
| EcoT14I | CCWWGG | 2 cut(s) | 27, 260 |
| ErhI | CCWWGG | 2 cut(s) | 27, 260 |
| FaiI | YATR | 1 cut(s) | 78 |
| FaqI | GGGAC | 1 cut(s) | 248 |
| FblI | GTMKAC | 1 cut(s) | 23 |
| Fnu4HI | GCNGC | 2 cut(s) | 198, 228 |
| FokI | GGATG | 1 cut(s) | 254 |
| Fsp4HI | GCNGC | 2 cut(s) | 198, 228 |
| GlaI | GCGC | 2 cut(s) | 160, 162 |
| GluI | GCNGC | 2 cut(s) | 198, 228 |
| HaeIII | GGCC | 2 cut(s) | 53, 83 |
| HapII | CCGG | 3 cut(s) | 84, 115, 156 |
| HgaI | GACGC | 1 cut(s) | 9 |
| HhaI | GCGC | 2 cut(s) | 161, 163 |
| Hin6I | GCGC | 2 cut(s) | 159, 161 |
| HinP1I | GCGC | 2 cut(s) | 159, 161 |
| HincII | GTYRAC | 1 cut(s) | 24 |
| HindII | GTYRAC | 1 cut(s) | 24 |
| HpaII | CCGG | 3 cut(s) | 84, 115, 156 |
| Hpy166II | GTNNAC | 1 cut(s) | 24 |
| Hpy188I | TCNGA | 3 cut(s) | 285, 383, 404 |
| Hpy188III | TCNNGA | 2 cut(s) | 129, 416 |
| Hpy8I | GTNNAC | 1 cut(s) | 24 |
| Hpy99I | CGWCG | 2 cut(s) | 25, 293 |
| HpyAV | CCTTC | 3 cut(s) | 8, 43, 370 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 224, 271, 304 |
| HpyF3I | CTNAG | 4 cut(s) | 201, 299, 372, 414 |
| HspAI | GCGC | 2 cut(s) | 159, 161 |
| KroI | GCCGGC | 1 cut(s) | 155 |
| KroNI | GCCGGC | 1 cut(s) | 157 |
| Kzo9I | GATC | 2 cut(s) | 108, 404 |
| LmnI | GCTCC | 3 cut(s) | 17, 211, 295 |
| LpnPI | CCDG | 9 cut(s) | 97, 111, 114, 128, 169, 177, 204, 284, 401 |
| Lsp1109I | GCAGC | 1 cut(s) | 214 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MalI | GATC | 2 cut(s) | 110, 406 |
| MboI | GATC | 2 cut(s) | 108, 404 |
| MboII | GAAGA | 2 cut(s) | 80, 256 |
| MflI | RGATCY | 1 cut(s) | 404 |
| MhlI | GDGCHC | 1 cut(s) | 186 |
| MluCI | AATT | 1 cut(s) | 92 |
| MmeI | TCCRAC | 2 cut(s) | 189, 361 |
| MroNI | GCCGGC | 1 cut(s) | 155 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspI | CCGG | 3 cut(s) | 84, 115, 156 |
| MspR9I | CCNGG | 1 cut(s) | 115 |
| MvnI | CGCG | 1 cut(s) | 161 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 224, 271, 304 |
| NaeI | GCCGGC | 1 cut(s) | 157 |
| NciI | CCSGG | 1 cut(s) | 115 |
| NdeII | GATC | 2 cut(s) | 108, 404 |
| NgoMIV | GCCGGC | 1 cut(s) | 155 |
| NlaIV | GGNNCC | 3 cut(s) | 119, 154, 406 |
| NmeAIII | GCCGAG | 1 cut(s) | 166 |
| NmuCI | GTSAC | 1 cut(s) | 319 |
| PalAI | GGCGCGCC | 1 cut(s) | 159 |
| PauI | GCGCGC | 1 cut(s) | 159 |
| PceI | AGGCCT | 1 cut(s) | 53 |
| PdiI | GCCGGC | 1 cut(s) | 157 |
| PkrI | GCNGC | 2 cut(s) | 199, 229 |
| PspN4I | GGNNCC | 3 cut(s) | 119, 154, 406 |
| PsuI | RGATCY | 1 cut(s) | 404 |
| PteI | GCGCGC | 1 cut(s) | 159 |
| RsaI | GTAC | 2 cut(s) | 137, 258 |
| RsaNI | GTAC | 2 cut(s) | 136, 257 |
| SalI | GTCGAC | 1 cut(s) | 22 |
| SatI | GCNGC | 2 cut(s) | 198, 228 |
| Sau3AI | GATC | 2 cut(s) | 108, 404 |
| ScrFI | CCNGG | 1 cut(s) | 115 |
| SduI | GDGCHC | 1 cut(s) | 186 |
| SetI | ASST | 8 cut(s) | 74, 195, 207, 216, 276, 300, 309, 381 |
| SgsI | GGCGCGCC | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| Sse9I | AATT | 1 cut(s) | 92 |
| SseBI | AGGCCT | 1 cut(s) | 53 |
| SsiI | CCGC | 5 cut(s) | 177, 198, 250, 278, 408 |
| StuI | AGGCCT | 1 cut(s) | 53 |
| StyD4I | CCNGG | 1 cut(s) | 113 |
| StyI | CCWWGG | 2 cut(s) | 27, 260 |
| TaqI | TCGA | 4 cut(s) | 23, 56, 68, 186 |
| TasI | AATT | 1 cut(s) | 92 |
| TauI | GCSGC | 1 cut(s) | 200 |
| TscAI | CASTG | 1 cut(s) | 324 |
| TseFI | GTSAC | 1 cut(s) | 319 |
| TseI | GCWGC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 319 |
| TspRI | CASTG | 1 cut(s) | 324 |
| XmiI | GTMKAC | 1 cut(s) | 23 |