pycom04g21770

Calreticulin-3-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
22779074 .. 22782907
3834 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g21770.8

Sequence Viewer

Length: 1275 bp
ATGGCGAAGCAGCAAAAGCAGCTGGTTTTGCTAATATTATCGCTCTCCTTGCTCTCCTTTTGCTTTCATTCCTCACTTTCAGAGATCATTTTCGAAGAGCGCTTCGACGACGACGAATGGCGAAGCCGTTGGGTGACATCTGCCTGGAAAAGCAGTGAAGGTAAAGCAGGTTCCTTTAAACACACAGCCGGAAAGTGGTCCGGTGACCACGATGATAGAGGAATTCAGACATCTAATGATGCCAAGCATTTTGCCATATCTGCAAAGATACCGGAGTTCAGCAACAGGAACAGGACGTTGGTCCTCCAGTACTCGATCAAGTTTGAGCAGGAAATTGAATGTGGTGGCGGTTACATAAAGCTTATGTCTGGATTTGTTAATCAGAAGAAATTCAGCGGGGACACTCCATACAGTTTAATGTTTGGTCCCGATATTTGCGGCACGGAGACAAAGAAGCTCCATGTCATAGTCTCCTACCAAGGCCAGAATTACCCCATCAAGAAGGATTTACAGTGTGAAACTGACAAGTTGACTCATTTCTACACGTTCACTCTGCGACCTGATGCAACTTATAGTGTCCTAACAGACAACCGTGAAAAGGATTCTGGAAGTATGTACACAGATTGGGATATTCTTCCTCCAAGAAAGATAAAAGATGTTACTGCAAAGAAGCCGGCTGACTGGGATCTTAGAGAATACATTGATGATCCCAATCACATCAAACCTGAGGGTTATGATTCAATTCCGAGAGAAATTCCGGATCCAAAAGCAAAGAAGCCCGAAGAATGGGATGATGAAGAGAACGGTCTGTGGAAAGCTCCAAAGATACCAAATCCAGCTTATAAAGGACCATGGAGACCCAAGAAAATCAAGAACCCAAATTACAAAGGGAAGTGGAAGATTCCTTGGATTGATAATCCAGAGTTTGAAGGTGATCCTAATCTCTATGTGCTTAAGCCAATTAATTATGTTGGTGTCGAAGTTTGGCAGGTAAAGGCTGGTTCAGTTTTCGACAACATTTTAATTTGTGATGATCCTGATTATGCAAAACAAGTGGTCAAGGAAGTCTTCGCCAATAGAGAGGCTGAAAAGGATGCCTTTGAAGAAGCAGAAAAAAGGAGGAAAGCACAGGAGGAAGAGGAGGCTCAAAGAGCAAGAGAAGAGGGAGAAAGGAGGAGAAGAGAGAGGGGTTATGATCGAGGTCACCGAGACAGACATAGAGACAGATACCGAAGGCACCGTAATTGGGATCACTATGATCATGACGAGCTATGA

Protein Analysis

425

Amino Acids

49.8

Weight (kDa)

6.5

Isoelectric Point (pI)

42.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 843
Acc36I ACCTGC 2 cut(s) 158, 979
AccB1I GGYRCC 1 cut(s) 1236
AccIII TCCGGA 1 cut(s) 757
AciI CCGC 3 cut(s) 348, 396, 438
AclWI GGATC 7 cut(s) 693, 701, 755, 768, 929, 1028, 1257
AcsI RAATTY 3 cut(s) 222, 389, 753
AfaI GTAC 2 cut(s) 311, 617
AfeI AGCGCT 1 cut(s) 101
AfiI CCNNNNNNNGG 4 cut(s) 195, 598, 786, 1246
AflII CTTAAG 1 cut(s) 953
AflIII ACRYGT 1 cut(s) 543
AgsI TTSAA 4 cut(s) 338, 741, 929, 1103
AjnI CCWGG 1 cut(s) 143
AjuI GAANNNNNNNTTGG 2 cut(s) 281, 313
AluBI AGCT 6 cut(s) 22, 361, 457, 818, 839, 1270
AluI AGCT 6 cut(s) 22, 361, 457, 818, 839, 1270
Alw26I GTCTC 5 cut(s) 440, 475, 850, 1203, 1215
AlwI GGATC 7 cut(s) 693, 701, 755, 768, 929, 1028, 1257
Aor13HI TCCGGA 1 cut(s) 757
Aor51HI AGCGCT 1 cut(s) 101
AoxI GGCC 1 cut(s) 481
ApeKI GCWGC 2 cut(s) 10, 19
ApoI RAATTY 3 cut(s) 222, 389, 753
AseI ATTAAT 1 cut(s) 963
Asp700I GAANNNNTTC 1 cut(s) 389
AspLEI GCGC 1 cut(s) 102
AspS9I GGNCC 4 cut(s) 198, 301, 425, 848
AsuHPI GGTGA 4 cut(s) 145, 215, 944, 1196
AsuII TTCGAA 1 cut(s) 93
AvaII GGWCC 4 cut(s) 198, 301, 425, 848
AxyI CCTNAGG 1 cut(s) 726
BaeI ACNNNNGTAYC 2 cut(s) 260, 293
BamHI GGATCC 1 cut(s) 760
BanI GGYRCC 1 cut(s) 1236
BbsI GAAGAC 1 cut(s) 1060
BbvI GCAGC 2 cut(s) 22, 31
BccI CCATC 1 cut(s) 503
BceAI ACGGC 1 cut(s) 111
BciT130I CCWGG 1 cut(s) 145
BclI TGATCA 1 cut(s) 1258
BcoDI GTCTC 5 cut(s) 440, 475, 850, 1203, 1215
BfoI RGCGCY 1 cut(s) 103
BfrI CTTAAG 1 cut(s) 953
BfuAI ACCTGC 2 cut(s) 158, 979
BisI GCNGC 3 cut(s) 11, 20, 439
BlsI GCNGC 3 cut(s) 12, 21, 440
BmcAI AGTACT 1 cut(s) 311
Bme1390I CCNGG 1 cut(s) 145
Bme18I GGWCC 4 cut(s) 198, 301, 425, 848
BmgT120I GGNCC 4 cut(s) 198, 301, 425, 848
BmiI GGNNCC 4 cut(s) 172, 427, 762, 1238
BmrFI CCNGG 1 cut(s) 145
BmrI ACTGGG 1 cut(s) 691
BmsI GCATC 3 cut(s) 229, 553, 1084
BmuI ACTGGG 1 cut(s) 691
BoxI GACNNNNGTC 1 cut(s) 299
BpiI GAAGAC 1 cut(s) 1060
BpmI CTGGAG 1 cut(s) 290
Bpu14I TTCGAA 1 cut(s) 93
BsaBI GATNNNNATC 2 cut(s) 711, 939
BsaI GGTCTC 1 cut(s) 850
BsaJI CCNNGG 3 cut(s) 478, 851, 905
BsaWI WCCGGW 3 cut(s) 200, 271, 757
Bsc4I CCNNNNNNNGG 4 cut(s) 195, 598, 786, 1246
Bse118I RCCGGY 1 cut(s) 673
Bse1I ACTGG 2 cut(s) 307, 686
Bse21I CCTNAGG 1 cut(s) 726
Bse8I GATNNNNATC 2 cut(s) 711, 939
BseAI TCCGGA 1 cut(s) 757
BseBI CCWGG 1 cut(s) 145
BseDI CCNNGG 3 cut(s) 478, 851, 905
BseGI GGATG 2 cut(s) 796, 1099
BseJI GATNNNNATC 2 cut(s) 711, 939
BseLI CCNNNNNNNGG 4 cut(s) 195, 598, 786, 1246
BseMII CTCAG 1 cut(s) 717
BseNI ACTGG 2 cut(s) 307, 686
BseRI GAGGAG 2 cut(s) 1154, 1189
BseXI GCAGC 2 cut(s) 22, 31
BshFI GGCC 1 cut(s) 483
BshNI GGYRCC 1 cut(s) 1236
BsiSI CCGG 5 cut(s) 189, 201, 272, 674, 758
BslFI GGGAC 2 cut(s) 411, 413
BslI CCNNNNNNNGG 4 cut(s) 195, 598, 786, 1246
BsmAI GTCTC 5 cut(s) 440, 475, 850, 1203, 1215
BsmFI GGGAC 2 cut(s) 411, 413
BsnI GGCC 1 cut(s) 483
Bso31I GGTCTC 1 cut(s) 850
Bsp119I TTCGAA 1 cut(s) 93
Bsp13I TCCGGA 1 cut(s) 757
Bsp1407I TGTACA 1 cut(s) 615
Bsp19I CCATGG 1 cut(s) 851
BspACI CCGC 3 cut(s) 348, 396, 438
BspANI GGCC 1 cut(s) 483
BspCNI CTCAG 1 cut(s) 718
BspEI TCCGGA 1 cut(s) 757
BspHI TCATGA 1 cut(s) 1261
BspLI GGNNCC 4 cut(s) 172, 427, 762, 1238
BspMI ACCTGC 2 cut(s) 158, 979
BspPI GGATC 7 cut(s) 693, 701, 755, 768, 929, 1028, 1257
BspQI GCTCTTC 1 cut(s) 90
BspT104I TTCGAA 1 cut(s) 93
BspT107I GGYRCC 1 cut(s) 1236
BspTI CTTAAG 1 cut(s) 953
BspTNI GGTCTC 1 cut(s) 850
BsrFI RCCGGY 1 cut(s) 673
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 2 cut(s) 307, 686
BssAI RCCGGY 1 cut(s) 673
BssECI CCNNGG 3 cut(s) 478, 851, 905
BssT1I CCWWGG 3 cut(s) 478, 851, 905
Bst2UI CCWGG 1 cut(s) 145
Bst4CI ACNGT 5 cut(s) 413, 513, 593, 806, 1241
Bst6I CTCTTC 5 cut(s) 90, 792, 1131, 1155, 1174
BstAFI CTTAAG 1 cut(s) 953
BstAUI TGTACA 1 cut(s) 615
BstBI TTCGAA 1 cut(s) 93
BstC8I GCNNGC 1 cut(s) 675
BstDEI CTNAG 2 cut(s) 689, 726
BstDSI CCRYGG 1 cut(s) 851
BstEII GGTNACC 2 cut(s) 203, 1202
BstF5I GGATG 2 cut(s) 796, 1099
BstH2I RGCGCY 1 cut(s) 103
BstHHI GCGC 1 cut(s) 102
BstMAI GTCTC 5 cut(s) 440, 475, 850, 1203, 1215
BstMWI GCNNNNNNNGC 6 cut(s) 16, 19, 28, 49, 260, 1151
BstNI CCWGG 1 cut(s) 145
BstPAI GACNNNNGTC 1 cut(s) 299
BstPI GGTNACC 2 cut(s) 203, 1202
BstSCI CCNGG 1 cut(s) 143
BstV1I GCAGC 2 cut(s) 22, 31
BstV2I GAAGAC 1 cut(s) 1060
BstX2I RGATCY 2 cut(s) 685, 760
BstYI RGATCY 2 cut(s) 685, 760
Bsu36I CCTNAGG 1 cut(s) 726
BsuRI GGCC 1 cut(s) 483
BtgI CCRYGG 1 cut(s) 851
BtsCI GGATG 2 cut(s) 796, 1099
BtsI GCAGTG 1 cut(s) 160
BtsIMutI CAGTG 2 cut(s) 160, 518
BveI ACCTGC 2 cut(s) 158, 979
Cac8I GCNNGC 1 cut(s) 675
CciI TCATGA 1 cut(s) 1261
CfoI GCGC 1 cut(s) 102
Cfr10I RCCGGY 1 cut(s) 673
Cfr13I GGNCC 4 cut(s) 198, 301, 425, 848
Csp6I GTAC 2 cut(s) 310, 616
CspCI CAANNNNNGTGG 2 cut(s) 1035, 1070
CviAII CATG 3 cut(s) 461, 852, 1262
CviQI GTAC 2 cut(s) 310, 616
DdeI CTNAG 2 cut(s) 689, 726
DraI TTTAAA 1 cut(s) 178
Eam1104I CTCTTC 5 cut(s) 90, 792, 1131, 1155, 1174
EarI CTCTTC 5 cut(s) 90, 792, 1131, 1155, 1174
Eco130I CCWWGG 3 cut(s) 478, 851, 905
Eco31I GGTCTC 1 cut(s) 850
Eco47I GGWCC 4 cut(s) 198, 301, 425, 848
Eco47III AGCGCT 1 cut(s) 101
Eco81I CCTNAGG 1 cut(s) 726
Eco91I GGTNACC 2 cut(s) 203, 1202
EcoO65I GGTNACC 2 cut(s) 203, 1202
EcoRI GAATTC 1 cut(s) 222
EcoRII CCWGG 1 cut(s) 143
EcoT14I CCWWGG 3 cut(s) 478, 851, 905
ErhI CCWWGG 3 cut(s) 478, 851, 905
FaeI CATG 3 cut(s) 464, 855, 1265
FalI AAGNNNNNCTT 4 cut(s) 1052, 1084, 1082, 1114
FaqI GGGAC 2 cut(s) 411, 413
FatI CATG 3 cut(s) 460, 851, 1261
FauI CCCGC 1 cut(s) 389
FbaI TGATCA 1 cut(s) 1258
Fnu4HI GCNGC 3 cut(s) 11, 20, 439
FokI GGATG 2 cut(s) 803, 1106
Fsp4HI GCNGC 3 cut(s) 11, 20, 439
GlaI GCGC 1 cut(s) 101
GluI GCNGC 3 cut(s) 11, 20, 439
GsuI CTGGAG 1 cut(s) 290
HaeII RGCGCY 1 cut(s) 103
HaeIII GGCC 1 cut(s) 483
HapII CCGG 5 cut(s) 189, 201, 272, 674, 758
HhaI GCGC 1 cut(s) 102
Hin1II CATG 3 cut(s) 464, 855, 1265
Hin6I GCGC 1 cut(s) 100
HinP1I GCGC 1 cut(s) 100
HincII GTYRAC 1 cut(s) 531
HindII GTYRAC 1 cut(s) 531
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 4 cut(s) 532, 602, 737, 901
HpaII CCGG 5 cut(s) 189, 201, 272, 674, 758
HphI GGTGA 4 cut(s) 145, 215, 944, 1196
Hpy166II GTNNAC 3 cut(s) 531, 549, 618
Hpy188I TCNGA 4 cut(s) 82, 228, 384, 747
Hpy188III TCNNGA 9 cut(s) 369, 428, 499, 606, 758, 871, 920, 1037, 1262
Hpy8I GTNNAC 3 cut(s) 531, 549, 618
Hpy99I CGWCG 3 cut(s) 110, 113, 116
HpyAV CCTTC 4 cut(s) 152, 496, 923, 1227
HpyCH4III ACNGT 5 cut(s) 413, 513, 593, 806, 1241
HpyCH4IV ACGT 2 cut(s) 296, 545
HpyCH4V TGCA 4 cut(s) 263, 566, 665, 1046
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 19, 28, 49, 260, 1151
HpyF3I CTNAG 2 cut(s) 689, 726
HpySE526I ACGT 2 cut(s) 296, 545
Hsp92II CATG 3 cut(s) 464, 855, 1265
HspAI GCGC 1 cut(s) 100
Kpn2I TCCGGA 1 cut(s) 757
KroI GCCGGC 1 cut(s) 673
KroNI GCCGGC 1 cut(s) 675
Ksp22I TGATCA 1 cut(s) 1258
LguI GCTCTTC 1 cut(s) 90
LmnI GCTCC 2 cut(s) 462, 823
Lsp1109I GCAGC 2 cut(s) 22, 31
LweI GCATC 3 cut(s) 229, 553, 1084
MaeII ACGT 2 cut(s) 296, 545
MaeIII GTNAC 5 cut(s) 133, 203, 350, 658, 1202
MflI RGATCY 2 cut(s) 685, 760
MlyI GAGTC 1 cut(s) 526
MroI TCCGGA 1 cut(s) 757
MroNI GCCGGC 1 cut(s) 673
MroXI GAANNNNTTC 1 cut(s) 389
MseI TTAA 6 cut(s) 177, 378, 416, 954, 963, 1022
MspA1I CMGCKG 2 cut(s) 22, 396
MspCI CTTAAG 1 cut(s) 953
MspI CCGG 5 cut(s) 189, 201, 272, 674, 758
MspR9I CCNGG 1 cut(s) 145
MvaI CCWGG 1 cut(s) 145
MwoI GCNNNNNNNGC 6 cut(s) 16, 19, 28, 49, 260, 1151
NaeI GCCGGC 1 cut(s) 675
NcoI CCATGG 1 cut(s) 851
NgoMIV GCCGGC 1 cut(s) 673
NlaIII CATG 3 cut(s) 464, 855, 1265
NlaIV GGNNCC 4 cut(s) 172, 427, 762, 1238
NmuCI GTSAC 3 cut(s) 133, 203, 1202
NspV TTCGAA 1 cut(s) 93
PagI TCATGA 1 cut(s) 1261
PciSI GCTCTTC 1 cut(s) 90
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 1204
PdiI GCCGGC 1 cut(s) 675
PdmI GAANNNNTTC 1 cut(s) 389
PfeI GAWTC 3 cut(s) 602, 737, 901
PkrI GCNGC 3 cut(s) 12, 21, 440
PleI GAGTC 1 cut(s) 526
PpsI GAGTC 1 cut(s) 526
PshAI GACNNNNGTC 1 cut(s) 299
PshBI ATTAAT 1 cut(s) 963
PsiI TTATAA 1 cut(s) 843
Psp6I CCWGG 1 cut(s) 143
PspEI GGTNACC 2 cut(s) 203, 1202
PspGI CCWGG 1 cut(s) 143
PspN4I GGNNCC 4 cut(s) 172, 427, 762, 1238
PspPI GGNCC 4 cut(s) 198, 301, 425, 848
PsrI GAACNNNNNNTAC 4 cut(s) 154, 186, 866, 898
PsuI RGATCY 2 cut(s) 685, 760
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 2 cut(s) 311, 617
RsaNI GTAC 2 cut(s) 310, 616
SapI GCTCTTC 1 cut(s) 90
SaqAI TTAA 6 cut(s) 177, 378, 416, 954, 963, 1022
SatI GCNGC 3 cut(s) 11, 20, 439
Sau96I GGNCC 4 cut(s) 198, 301, 425, 848
ScaI AGTACT 1 cut(s) 311
SchI GAGTC 1 cut(s) 526
ScrFI CCNGG 1 cut(s) 145
SfaNI GCATC 3 cut(s) 229, 553, 1084
SfuI TTCGAA 1 cut(s) 93
SinI GGWCC 4 cut(s) 198, 301, 425, 848
SmlI CTYRAG 1 cut(s) 953
SmoI CTYRAG 1 cut(s) 953
SsiI CCGC 3 cut(s) 348, 396, 438
SspI AATATT 1 cut(s) 36
StyD4I CCNGG 1 cut(s) 143
StyI CCWWGG 3 cut(s) 478, 851, 905
TaaI ACNGT 5 cut(s) 413, 513, 593, 806, 1241
TaiI ACGT 2 cut(s) 299, 548
TaqI TCGA 6 cut(s) 93, 105, 314, 978, 1011, 1198
TatI WGTACW 2 cut(s) 309, 615
TauI GCSGC 1 cut(s) 441
TfiI GAWTC 3 cut(s) 602, 737, 901
Tru1I TTAA 6 cut(s) 177, 378, 416, 954, 963, 1022
Tru9I TTAA 6 cut(s) 177, 378, 416, 954, 963, 1022
TscAI CASTG 2 cut(s) 160, 518
TseFI GTSAC 3 cut(s) 133, 203, 1202
TseI GCWGC 2 cut(s) 10, 19
Tsp45I GTSAC 3 cut(s) 133, 203, 1202
TspDTI ATGAA 2 cut(s) 56, 810
TspGWI ACGGA 1 cut(s) 458
TspRI CASTG 2 cut(s) 160, 518
Vha464I CTTAAG 1 cut(s) 953
VpaK11BI GGWCC 4 cut(s) 198, 301, 425, 848
VspI ATTAAT 1 cut(s) 963
XapI RAATTY 3 cut(s) 222, 389, 753
XmnI GAANNNNTTC 1 cut(s) 389
ZrmI AGTACT 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.