Rh2AG276300

Calreticulin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
33105180 .. 33112232
7053 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG276300.1

Sequence Viewer

Length: 1266 bp
ATGAGAGAGCTGCGAAAGATGAAGCTTCTCGAATCTCTTCTTCTTCTTCTTCTGGTTCCGCTTCTATGCCTCCACTTCCGTCTCGCCGTCTCCGAAATCTTCTTCGAAGAGCGATTTGAAGATGGGTGGAAGAGCCGGTGGGTGTTGTCGGACTGGAAAAGGGCCGAAGGAAAAGCAGGAACGTTTAAGTACACTGCTGGGAAATGGTCTGGAGATCCTGATGATAAAGGCATTCAGACATATAATGATGCCAAGCATTATGCCATATCTGCAAAAATTCCTGAGTTCAGCAACAAAAACAGAACTCTAGTGGTCCAGTATTCGATTAAATTTGAGCAAGACATTGAATGTGGTGGTGGTTACATCAAGCTTCTATCTGGCTATGTGAATCAGAAAAAGTTCGGCGGTGATACCCCATACAGTTTCATGTTTGGACCAGATATATGTGGCTCACAGACCAAAAAACTCCATCTTATACTTTCTTACCAGGGGCAGAACTATCCCATAAAAAAGGATCTTCAATGTGAAACAGACAAGTTGACTCATTTCTATACATTTATTCTTAGACCTGATGCAACTTACAGTGTTCTTGTTGATAACCGAGAAAGAGATTCTGGAAGCATGTACACTGATTGGGATATCCTTCCTCCACGAAAAATCAAGGATGTCAATGCAAGAAAGCCATCAGACTGGGATGACAGAGAGTACATTGAAGACCTTAAAGCCGTCAAACCAGAGGGATATGATTCAGTTCCATCTGAAATTCCTGATCCAAAGGCCAAAGAGCCCGAGGACTGGGATGAGGAAGAGAACGGATTATGGAGACCACCAAAGATCCCAAATCCAGCTTATAAGGGCCCATGGAAGCGCAAGAAAATCAAGAACCCCAACTACAAGGGGAAGTGGAAGACTCCGTGGATTGATAACCCAGAGTTTGAGGATGATCCTGACCTTTATGTGCTGAAGCCAATAAAATATGTGGGCATTGAAGTTTGGCAGGTAAAAGCTGGTTCAGTTTTCGACAACATTTTGATCTGTGATGATCCACAGTATGCAAAACAAGTGGTAGAAGAGATATTTTCCAATAGAGAGGCTGAAAAAGAAGCTTTTGAGGAAGCAGAGAAGGAGAGAAGAGCACGAGAAGCAGAGGATGCTAGAAGAGCAAGAGAGGAAGGTGAAAGAAAGAAGTGGGAGAGGGATCGTCAGTATGGAGATAGGAGGCGCCGTAGAAGGGTATTATATTCCTTGATTTTGTTTCATTTGTGA

Protein Analysis

421

Amino Acids

49.65

Weight (kDa)

7.54

Isoelectric Point (pI)

47.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Calreticulin PF00262 35 - 271 1.5e-58 Calreticulin family
Calreticulin PF00262 272 - 345 1.2e-19 Calreticulin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 852
Acc36I ACCTGC 1 cut(s) 988
AccB1I GGYRCC 1 cut(s) 1221
AciI CCGC 2 cut(s) 59, 405
AclI AACGTT 1 cut(s) 182
AclWI GGATC 7 cut(s) 209, 522, 764, 829, 938, 1037, 1206
AcsI RAATTY 3 cut(s) 276, 329, 762
AcuI CTGAAG 1 cut(s) 983
AcyI GRCGYC 1 cut(s) 1222
AfaI GTAC 3 cut(s) 191, 626, 707
AfiI CCNNNNNNNGG 2 cut(s) 795, 1231
AgsI TTSAA 5 cut(s) 119, 347, 521, 713, 989
AjnI CCWGG 1 cut(s) 486
AluBI AGCT 6 cut(s) 10, 25, 370, 848, 1007, 1106
AluI AGCT 6 cut(s) 10, 25, 370, 848, 1007, 1106
Alw21I GWGCWC 1 cut(s) 1138
Alw26I GTCTC 3 cut(s) 86, 94, 817
AlwI GGATC 7 cut(s) 209, 522, 764, 829, 938, 1037, 1206
Ama87I CYCGRG 1 cut(s) 788
AoxI GGCC 3 cut(s) 162, 777, 856
ApaI GGGCCC 1 cut(s) 860
ApeKI GCWGC 1 cut(s) 10
ApoI RAATTY 3 cut(s) 276, 329, 762
Asp700I GAANNNNTTC 2 cut(s) 36, 398
AspLEI GCGC 2 cut(s) 870, 1224
AspS9I GGNCC 5 cut(s) 162, 313, 434, 856, 857
AsuHPI GGTGA 2 cut(s) 419, 1187
AsuII TTCGAA 1 cut(s) 105
AvaI CYCGRG 1 cut(s) 788
AvaII GGWCC 2 cut(s) 313, 434
BaeGI GKGCMC 1 cut(s) 860
BanI GGYRCC 1 cut(s) 1221
BanII GRGCYC 2 cut(s) 789, 860
BauI CACGAG 1 cut(s) 1137
BbsI GAAGAC 2 cut(s) 720, 914
Bbv12I GWGCWC 1 cut(s) 1138
BccI CCATC 4 cut(s) 116, 477, 691, 763
BceAI ACGGC 3 cut(s) 71, 710, 1209
BciT130I CCWGG 1 cut(s) 488
BcoDI GTCTC 3 cut(s) 86, 94, 817
BfaI CTAG 2 cut(s) 308, 1155
BfoI RGCGCY 1 cut(s) 1225
BfuAI ACCTGC 1 cut(s) 988
BisI GCNGC 1 cut(s) 11
BlsI GCNGC 1 cut(s) 12
Bme1390I CCNGG 1 cut(s) 488
Bme18I GGWCC 2 cut(s) 313, 434
BmeT110I CYCGRG 1 cut(s) 788
BmgT120I GGNCC 5 cut(s) 162, 313, 434, 856, 857
BmiI GGNNCC 3 cut(s) 57, 858, 1223
BmrFI CCNGG 1 cut(s) 488
BmrI ACTGGG 2 cut(s) 700, 805
BmsI GCATC 3 cut(s) 238, 562, 1141
BmuI ACTGGG 2 cut(s) 700, 805
BpiI GAAGAC 2 cut(s) 720, 914
BpmI CTGGAG 1 cut(s) 231
Bpu14I TTCGAA 1 cut(s) 105
BsaHI GRCGYC 1 cut(s) 1222
BsaI GGTCTC 1 cut(s) 817
BsaJI CCNNGG 4 cut(s) 487, 789, 860, 914
BsaXI ACNNNNNCTCC 2 cut(s) 1210, 1240
Bsc4I CCNNNNNNNGG 2 cut(s) 795, 1231
Bse118I RCCGGY 1 cut(s) 135
Bse1I ACTGG 4 cut(s) 158, 316, 695, 800
BseBI CCWGG 1 cut(s) 488
BseDI CCNNGG 4 cut(s) 487, 789, 860, 914
BseGI GGATG 5 cut(s) 670, 700, 805, 946, 1156
BseLI CCNNNNNNNGG 2 cut(s) 795, 1231
BseMII CTCAG 1 cut(s) 273
BseNI ACTGG 4 cut(s) 158, 316, 695, 800
BseSI GKGCMC 1 cut(s) 860
BseYI CCCAGC 1 cut(s) 197
BshFI GGCC 3 cut(s) 164, 779, 858
BshNI GGYRCC 1 cut(s) 1221
BsiHKAI GWGCWC 1 cut(s) 1138
BsiHKCI CYCGRG 1 cut(s) 788
BsiSI CCGG 1 cut(s) 136
BslI CCNNNNNNNGG 2 cut(s) 795, 1231
BsmAI GTCTC 3 cut(s) 86, 94, 817
BsmBI CGTCTC 2 cut(s) 86, 94
BsmI GAATGC 1 cut(s) 231
BsnI GGCC 3 cut(s) 164, 779, 858
Bso31I GGTCTC 1 cut(s) 817
BsoBI CYCGRG 1 cut(s) 788
Bsp119I TTCGAA 1 cut(s) 105
Bsp120I GGGCCC 1 cut(s) 856
Bsp1286I GDGCHC 3 cut(s) 789, 860, 1138
Bsp1407I TGTACA 1 cut(s) 624
Bsp143I GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
Bsp19I CCATGG 1 cut(s) 860
BspACI CCGC 2 cut(s) 59, 405
BspANI GGCC 3 cut(s) 164, 779, 858
BspCNI CTCAG 1 cut(s) 274
BspLI GGNNCC 3 cut(s) 57, 858, 1223
BspMI ACCTGC 1 cut(s) 988
BspPI GGATC 7 cut(s) 209, 522, 764, 829, 938, 1037, 1206
BspQI GCTCTTC 4 cut(s) 102, 125, 1126, 1153
BspT104I TTCGAA 1 cut(s) 105
BspT107I GGYRCC 1 cut(s) 1221
BspTNI GGTCTC 1 cut(s) 817
BsrFI RCCGGY 1 cut(s) 135
BsrGI TGTACA 1 cut(s) 624
BsrI ACTGG 4 cut(s) 158, 316, 695, 800
BssAI RCCGGY 1 cut(s) 135
BssECI CCNNGG 4 cut(s) 487, 789, 860, 914
BssMI GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
BssNI GRCGYC 1 cut(s) 1222
BssSI CACGAG 1 cut(s) 1137
BssT1I CCWWGG 1 cut(s) 860
Bst2BI CACGAG 1 cut(s) 1137
Bst2UI CCWGG 1 cut(s) 488
Bst4CI ACNGT 3 cut(s) 422, 584, 1050
Bst6I CTCTTC 7 cut(s) 42, 102, 125, 801, 1065, 1126, 1153
BstACI GRCGYC 1 cut(s) 1222
BstAPI GCANNNNNTGC 1 cut(s) 1151
BstAUI TGTACA 1 cut(s) 624
BstBI TTCGAA 1 cut(s) 105
BstDEI CTNAG 2 cut(s) 282, 563
BstDSI CCRYGG 2 cut(s) 860, 914
BstF5I GGATG 5 cut(s) 670, 700, 805, 946, 1156
BstH2I RGCGCY 1 cut(s) 1225
BstHHI GCGC 2 cut(s) 870, 1224
BstKTI GATC 8 cut(s) 217, 517, 772, 837, 946, 1035, 1045, 1201
BstMAI GTCTC 3 cut(s) 86, 94, 817
BstMBI GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
BstMWI GCNNNNNNNGC 4 cut(s) 269, 1142, 1151, 1160
BstNI CCWGG 1 cut(s) 488
BstNSI RCATGY 1 cut(s) 625
BstSCI CCNGG 1 cut(s) 486
BstSLI GKGCMC 1 cut(s) 860
BstV2I GAAGAC 2 cut(s) 720, 914
BstX2I RGATCY 3 cut(s) 214, 514, 834
BstXI CCANNNNNNTGG 1 cut(s) 690
BstYI RGATCY 3 cut(s) 214, 514, 834
BsuRI GGCC 3 cut(s) 164, 779, 858
BtgI CCRYGG 2 cut(s) 860, 914
BtsCI GGATG 5 cut(s) 670, 700, 805, 946, 1156
BtsI GCAGTG 1 cut(s) 192
BtsIMutI CAGTG 3 cut(s) 192, 589, 627
BveI ACCTGC 1 cut(s) 988
CfoI GCGC 2 cut(s) 870, 1224
Cfr10I RCCGGY 1 cut(s) 135
Cfr13I GGNCC 5 cut(s) 162, 313, 434, 856, 857
Csp6I GTAC 3 cut(s) 190, 625, 706
CspCI CAANNNNNGTGG 2 cut(s) 1044, 1079
CviAII CATG 3 cut(s) 427, 622, 861
CviQI GTAC 3 cut(s) 190, 625, 706
DdeI CTNAG 2 cut(s) 282, 563
DinI GGCGCC 1 cut(s) 1223
DpnI GATC 8 cut(s) 216, 516, 771, 836, 945, 1034, 1044, 1200
DpnII GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
Eam1104I CTCTTC 7 cut(s) 42, 102, 125, 801, 1065, 1126, 1153
EarI CTCTTC 7 cut(s) 42, 102, 125, 801, 1065, 1126, 1153
Eco130I CCWWGG 1 cut(s) 860
Eco24I GRGCYC 2 cut(s) 789, 860
Eco31I GGTCTC 1 cut(s) 817
Eco32I GATATC 1 cut(s) 640
Eco47I GGWCC 2 cut(s) 313, 434
Eco57I CTGAAG 1 cut(s) 983
Eco88I CYCGRG 1 cut(s) 788
EcoO109I RGGNCCY 1 cut(s) 856
EcoRII CCWGG 1 cut(s) 486
EcoRV GATATC 1 cut(s) 640
EcoT14I CCWWGG 1 cut(s) 860
EcoT38I GRGCYC 2 cut(s) 789, 860
EgeI GGCGCC 1 cut(s) 1223
EheI GGCGCC 1 cut(s) 1223
ErhI CCWWGG 1 cut(s) 860
Esp3I CGTCTC 2 cut(s) 86, 94
FaeI CATG 3 cut(s) 430, 625, 864
FatI CATG 3 cut(s) 426, 621, 860
Fnu4HI GCNGC 1 cut(s) 11
FokI GGATG 5 cut(s) 677, 707, 812, 953, 1163
FriOI GRGCYC 2 cut(s) 789, 860
Fsp4HI GCNGC 1 cut(s) 11
FspBI CTAG 2 cut(s) 308, 1155
GlaI GCGC 2 cut(s) 869, 1223
GluI GCNGC 1 cut(s) 11
GsaI CCCAGC 1 cut(s) 201
GsuI CTGGAG 1 cut(s) 231
HaeII RGCGCY 1 cut(s) 1225
HaeIII GGCC 3 cut(s) 164, 779, 858
HapII CCGG 1 cut(s) 136
HhaI GCGC 2 cut(s) 870, 1224
Hin1I GRCGYC 1 cut(s) 1222
Hin1II CATG 3 cut(s) 430, 625, 864
Hin6I GCGC 2 cut(s) 868, 1222
HinP1I GCGC 2 cut(s) 868, 1222
HincII GTYRAC 1 cut(s) 540
HindII GTYRAC 1 cut(s) 540
HindIII AAGCTT 3 cut(s) 23, 368, 1104
HinfI GANTC 6 cut(s) 32, 388, 541, 611, 746, 910
HpaII CCGG 1 cut(s) 136
HphI GGTGA 2 cut(s) 419, 1187
Hpy166II GTNNAC 3 cut(s) 192, 540, 627
Hpy188I TCNGA 6 cut(s) 94, 151, 237, 393, 688, 760
Hpy188III TCNNGA 8 cut(s) 29, 210, 218, 281, 615, 767, 880, 947
Hpy8I GTNNAC 3 cut(s) 192, 540, 627
HpyAV CCTTC 5 cut(s) 161, 653, 1117, 1166, 1224
HpyCH4III ACNGT 3 cut(s) 422, 584, 1050
HpyCH4IV ACGT 1 cut(s) 182
HpyCH4V TGCA 4 cut(s) 272, 575, 674, 1055
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 1142, 1151, 1160
HpyF3I CTNAG 2 cut(s) 282, 563
HpySE526I ACGT 1 cut(s) 182
Hsp92I GRCGYC 1 cut(s) 1222
Hsp92II CATG 3 cut(s) 430, 625, 864
HspAI GCGC 2 cut(s) 868, 1222
KasI GGCGCC 1 cut(s) 1221
Kzo9I GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
LguI GCTCTTC 4 cut(s) 102, 125, 1126, 1153
LweI GCATC 3 cut(s) 238, 562, 1141
MaeI CTAG 2 cut(s) 308, 1155
MaeII ACGT 1 cut(s) 182
MaeIII GTNAC 1 cut(s) 359
MalI GATC 8 cut(s) 216, 516, 771, 836, 945, 1034, 1044, 1200
MboI GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
MflI RGATCY 3 cut(s) 214, 514, 834
MhlI GDGCHC 3 cut(s) 789, 860, 1138
MluCI AATT 3 cut(s) 276, 329, 762
Mly113I GGCGCC 1 cut(s) 1222
MlyI GAGTC 2 cut(s) 535, 904
MmeI TCCRAC 1 cut(s) 129
MroXI GAANNNNTTC 2 cut(s) 36, 398
MseI TTAA 3 cut(s) 186, 327, 720
MspI CCGG 1 cut(s) 136
MspR9I CCNGG 1 cut(s) 488
Mva1269I GAATGC 1 cut(s) 231
MvaI CCWGG 1 cut(s) 488
MwoI GCNNNNNNNGC 4 cut(s) 269, 1142, 1151, 1160
NarI GGCGCC 1 cut(s) 1222
NcoI CCATGG 1 cut(s) 860
NdeII GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
NlaIII CATG 3 cut(s) 430, 625, 864
NlaIV GGNNCC 3 cut(s) 57, 858, 1223
NspI RCATGY 1 cut(s) 625
NspV TTCGAA 1 cut(s) 105
PciSI GCTCTTC 4 cut(s) 102, 125, 1126, 1153
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PctI GAATGC 1 cut(s) 231
PdmI GAANNNNTTC 2 cut(s) 36, 398
PfeI GAWTC 4 cut(s) 32, 388, 611, 746
PkrI GCNGC 1 cut(s) 12
PleI GAGTC 2 cut(s) 535, 904
PluTI GGCGCC 1 cut(s) 1225
PpsI GAGTC 2 cut(s) 535, 904
PsiI TTATAA 1 cut(s) 852
Psp1406I AACGTT 1 cut(s) 182
Psp6I CCWGG 1 cut(s) 486
PspFI CCCAGC 1 cut(s) 197
PspGI CCWGG 1 cut(s) 486
PspN4I GGNNCC 3 cut(s) 57, 858, 1223
PspOMI GGGCCC 1 cut(s) 856
PspPI GGNCC 5 cut(s) 162, 313, 434, 856, 857
PsrI GAACNNNNNNTAC 2 cut(s) 875, 907
PsuI RGATCY 3 cut(s) 214, 514, 834
RsaI GTAC 3 cut(s) 191, 626, 707
RsaNI GTAC 3 cut(s) 190, 625, 706
SapI GCTCTTC 4 cut(s) 102, 125, 1126, 1153
SaqAI TTAA 3 cut(s) 186, 327, 720
SatI GCNGC 1 cut(s) 11
Sau3AI GATC 8 cut(s) 214, 514, 769, 834, 943, 1032, 1042, 1198
Sau96I GGNCC 5 cut(s) 162, 313, 434, 856, 857
SchI GAGTC 2 cut(s) 535, 904
ScrFI CCNGG 1 cut(s) 488
SduI GDGCHC 3 cut(s) 789, 860, 1138
SfaNI GCATC 3 cut(s) 238, 562, 1141
SfoI GGCGCC 1 cut(s) 1223
SfuI TTCGAA 1 cut(s) 105
SinI GGWCC 2 cut(s) 313, 434
Sse9I AATT 3 cut(s) 276, 329, 762
SsiI CCGC 2 cut(s) 59, 405
SspDI GGCGCC 1 cut(s) 1221
SspMI CTAG 2 cut(s) 308, 1155
StyD4I CCNGG 1 cut(s) 486
StyI CCWWGG 1 cut(s) 860
TaaI ACNGT 3 cut(s) 422, 584, 1050
TaiI ACGT 1 cut(s) 185
TaqI TCGA 4 cut(s) 30, 105, 323, 1020
TasI AATT 3 cut(s) 276, 329, 762
TatI WGTACW 3 cut(s) 189, 624, 705
TfiI GAWTC 4 cut(s) 32, 388, 611, 746
Tru1I TTAA 3 cut(s) 186, 327, 720
Tru9I TTAA 3 cut(s) 186, 327, 720
TscAI CASTG 3 cut(s) 199, 589, 634
TseI GCWGC 1 cut(s) 10
TspDTI ATGAA 3 cut(s) 35, 415, 1247
TspGWI ACGGA 3 cut(s) 68, 828, 903
TspRI CASTG 3 cut(s) 199, 589, 634
VpaK11BI GGWCC 2 cut(s) 313, 434
XapI RAATTY 3 cut(s) 276, 329, 762
XceI RCATGY 1 cut(s) 625
XmnI GAANNNNTTC 2 cut(s) 36, 398
XspI CTAG 2 cut(s) 308, 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.