Phytosulfokines
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49780 AT5G65870 |
| fragaria_vesca | FvH4_2g03340 FvH4_2g03370 FvH4_2g03370 FvH4_2g32750 |
| malus_domestica | MD05G1105500.v1.1 MD08G1079100.v1.1 MD10G1110000.v1.1 MD15G1066300.v1.1 |
| prunus_persica | Prupe.1G420000_v2.0.a1 Prupe.8G150200_v2.0.a1 |
| pyrus_communis | pycom05g10250 pycom08g06550 pycom10g09530 pycom15g06250 |
| rosa_chinensis | RchiOBHm_Chr6g0248481 RchiOBHm_Chr6g0309921 |
| rosa_multiflora | Rmu_sc0000294.1_g000006 Rmu_sc0002553.1_g000013 |
| rosa_roxburghii | Rroxscaffold_7G00159040 Rroxscaffold_7G00213260 |
| rosa_rugosa | Rorug05G0531600.1 Rorug06G0375900 |
| rosa_samantha | Rh6AG047500 Rh6AG489800 Rh6BG043800 Rh6BG499200 Rh6CG040500 Rh6CG504100 Rh6DG037000 Rh6DG490300 |
| rosa_wichuraiana | Rw6G004120 Rw6G042630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 73 |
| AciI | CCGC | 2 cut(s) | 73, 248 |
| AcoI | YGGCCR | 1 cut(s) | 74 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 28 |
| AgsI | TTSAA | 2 cut(s) | 152, 163 |
| AluBI | AGCT | 1 cut(s) | 13 |
| AluI | AGCT | 1 cut(s) | 13 |
| AoxI | GGCC | 1 cut(s) | 74 |
| AspLEI | GCGC | 1 cut(s) | 73 |
| AsuHPI | GGTGA | 1 cut(s) | 7 |
| BccI | CCATC | 2 cut(s) | 61, 200 |
| BceAI | ACGGC | 1 cut(s) | 61 |
| BisI | GCNGC | 2 cut(s) | 74, 249 |
| BlsI | GCNGC | 2 cut(s) | 75, 250 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 226, 258 |
| BsaJI | CCNNGG | 1 cut(s) | 186 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseDI | CCNNGG | 1 cut(s) | 186 |
| BseGI | GGATG | 1 cut(s) | 172 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BseMII | CTCAG | 2 cut(s) | 37, 147 |
| BseRI | GAGGAG | 2 cut(s) | 29, 32 |
| BseX3I | CGGCCG | 1 cut(s) | 74 |
| Bsh1236I | CGCG | 1 cut(s) | 73 |
| Bsh1285I | CGRYCG | 1 cut(s) | 77 |
| BshFI | GGCC | 1 cut(s) | 76 |
| BsiEI | CGRYCG | 1 cut(s) | 77 |
| BsiSI | CCGG | 1 cut(s) | 60 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 28 |
| BsnI | GGCC | 1 cut(s) | 76 |
| Bsp19I | CCATGG | 1 cut(s) | 186 |
| BspACI | CCGC | 2 cut(s) | 73, 248 |
| BspANI | GGCC | 1 cut(s) | 76 |
| BspCNI | CTCAG | 2 cut(s) | 36, 148 |
| BspFNI | CGCG | 1 cut(s) | 73 |
| BssECI | CCNNGG | 1 cut(s) | 186 |
| BssT1I | CCWWGG | 1 cut(s) | 186 |
| Bst6I | CTCTTC | 1 cut(s) | 50 |
| BstDEI | CTNAG | 2 cut(s) | 23, 156 |
| BstDSI | CCRYGG | 1 cut(s) | 186 |
| BstF5I | GGATG | 1 cut(s) | 172 |
| BstFNI | CGCG | 1 cut(s) | 73 |
| BstHHI | GCGC | 1 cut(s) | 73 |
| BstMCI | CGRYCG | 1 cut(s) | 77 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 79 |
| BstUI | CGCG | 1 cut(s) | 73 |
| BstZI | CGGCCG | 1 cut(s) | 74 |
| BsuRI | GGCC | 1 cut(s) | 76 |
| BtgI | CCRYGG | 1 cut(s) | 186 |
| BtsCI | GGATG | 1 cut(s) | 172 |
| BtsIMutI | CAGTG | 2 cut(s) | 31, 142 |
| CfoI | GCGC | 1 cut(s) | 73 |
| CviAII | CATG | 2 cut(s) | 142, 187 |
| CviJI | RGCY | 5 cut(s) | 13, 21, 76, 185, 251 |
| CviKI_1 | RGCY | 5 cut(s) | 13, 21, 76, 185, 251 |
| DdeI | CTNAG | 2 cut(s) | 23, 156 |
| EaeI | YGGCCR | 1 cut(s) | 74 |
| EagI | CGGCCG | 1 cut(s) | 74 |
| Eam1104I | CTCTTC | 1 cut(s) | 50 |
| EarI | CTCTTC | 1 cut(s) | 50 |
| EclXI | CGGCCG | 1 cut(s) | 74 |
| Eco130I | CCWWGG | 1 cut(s) | 186 |
| Eco52I | CGGCCG | 1 cut(s) | 74 |
| EcoT14I | CCWWGG | 1 cut(s) | 186 |
| ErhI | CCWWGG | 1 cut(s) | 186 |
| FaeI | CATG | 2 cut(s) | 145, 190 |
| FaiI | YATR | 4 cut(s) | 143, 188, 270, 289 |
| FatI | CATG | 2 cut(s) | 141, 186 |
| Fnu4HI | GCNGC | 2 cut(s) | 74, 249 |
| FokI | GGATG | 1 cut(s) | 179 |
| Fsp4HI | GCNGC | 2 cut(s) | 74, 249 |
| GlaI | GCGC | 1 cut(s) | 72 |
| GluI | GCNGC | 2 cut(s) | 74, 249 |
| HaeIII | GGCC | 1 cut(s) | 76 |
| HapII | CCGG | 1 cut(s) | 60 |
| HhaI | GCGC | 1 cut(s) | 73 |
| Hin1II | CATG | 2 cut(s) | 145, 190 |
| Hin6I | GCGC | 1 cut(s) | 71 |
| HinP1I | GCGC | 1 cut(s) | 71 |
| HpaII | CCGG | 1 cut(s) | 60 |
| HphI | GGTGA | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 1 cut(s) | 130 |
| HpyAV | CCTTC | 1 cut(s) | 157 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 79 |
| HpyF3I | CTNAG | 2 cut(s) | 23, 156 |
| Hsp92II | CATG | 2 cut(s) | 145, 190 |
| HspAI | GCGC | 1 cut(s) | 71 |
| LpnPI | CCDG | 4 cut(s) | 31, 73, 168, 242 |
| MmeI | TCCRAC | 1 cut(s) | 193 |
| MnlI | CCTC | 6 cut(s) | 32, 47, 50, 53, 166, 187 |
| MspI | CCGG | 1 cut(s) | 60 |
| MvnI | CGCG | 1 cut(s) | 73 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 79 |
| NcoI | CCATGG | 1 cut(s) | 186 |
| NlaIII | CATG | 2 cut(s) | 145, 190 |
| PkrI | GCNGC | 2 cut(s) | 75, 250 |
| SatI | GCNGC | 2 cut(s) | 74, 249 |
| SetI | ASST | 3 cut(s) | 15, 157, 177 |
| SsiI | CCGC | 2 cut(s) | 73, 248 |
| StyI | CCWWGG | 1 cut(s) | 186 |
| TauI | GCSGC | 2 cut(s) | 76, 251 |
| TscAI | CASTG | 2 cut(s) | 31, 142 |
| TspDTI | ATGAA | 1 cut(s) | 158 |
| TspRI | CASTG | 2 cut(s) | 31, 142 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 25 |