pycom07g28220

Phosphoenolpyruvate carboxykinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
27613269 .. 27615862
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g28220.8

Sequence Viewer

Length: 1296 bp
ATGATGAGAATCCTCAACTTCAACTTGGAGCGGTTCATTGAAGGCTCATTCAGTTCAACATCCCTGCCTTTCTTCCTCTCCTCCCAACGCGTGCGGGCACGGCCGGCAGGGACGGAGGCAGGGACAGGGACAGGGAGGGTCCTCGATTTCTCGTGTGGTCTTAGCATGGCTTTGGCCGGCAAAGGTGTAATTGTCGACCACCAAGCTTTTCATAATTTGACCTCCTCTCAGCTTCAGCACAAGGGTGCAACAATTCCAGAATCATTGTCAGGACTTCCACTTCTTGTTAGAGGACATTTCCATGGAATAGGAGCAGCAGCAGCAGCAGGAGGAGGAGCTTCCCAAATTTCCAAGCCACAGTTCACTAAGCTTTTGAAACATGTCACAAGTCATATATCATCCATCTCCAACATTTTTGTTCATGACGGTGCTATCGGTTCATTACCAAAATGTGATGCAAAAGTTCGTTTAATAAGTGATAGTCCGTCTGCTGTGCTCTCACTATCCCGTATTCTCTGGGGGACTTCCACCCGTGCAGTTTCTCACGATTCATGTCCTTTGACAGTTTATGTGGCTACTTCTATAAGTTCAGGAATTGGGGATGTTATTGACCTTGGATCTAAAGGAATTAATGGATTTATAGCTGCTGATATTGAGCGTTCATCACTTGTTTTATGTGGTAAAGCCTTCTCAGATTTAAATGTAACTAAAGAAGCACTAGCGGCCTTGTCTGGACCTGTTATATTTGCACGGGGAGGCCTTCCACTATGTGCAAGATTTGCAGCCAAAGGTACCTTTAAGAGCTGCAGACATCTGTTGGTGCCTAAGGAGGCAGGTGTAATTCTTTCTTCTGAAGGTGTTGCACCATTGTTTCAAACTGGTGGCCAAAATCTGTTCAAGTTCCCATCTGTTGTAGTCCTTGCATCTTCTGACAGTACTGGCGTTATCCCTTCTGTTTCAAAGCTCTCCCCTGGCCAGGCAGCTTATCACTTCTTAGCTGGTTATCAGAATGGGAAGTTCATGCCCGCATACAACAAAGGCCCCTCGTCTATTCACCCAATGGAACTAGCTAAGGCATTTCTGTCCAAGTTGCAAGATGACAAGATCTCATCTTACTTATTGAATGTCAATGGAGAAGAAAAGAATGTAAATGGCAAAGATTTGGCTAATCTGGTGCAATCAACTTTGTCCGAGAACATCCCACCATTTGAAGCTAAAAGTGGGGATCTTGAAGACAAGTACAAGAGCTTCCTGTTGAGCGAATTTCAAGAAGTGCCAGAAGAATTATCGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

432

Amino Acids

45.5

Weight (kDa)

8.78

Isoelectric Point (pI)

40.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 824
Acc36I ACCTGC 1 cut(s) 824
Acc65I GGTACC 1 cut(s) 791
AccB1I GGYRCC 2 cut(s) 791, 820
AccBSI CCGCTC 1 cut(s) 31
AccI GTMKAC 1 cut(s) 195
AccII CGCG 1 cut(s) 90
AciI CCGC 4 cut(s) 31, 94, 722, 1026
AclWI GGATC 2 cut(s) 625, 1233
AcoI YGGCCR 4 cut(s) 101, 174, 883, 973
AcsI RAATTY 2 cut(s) 345, 1262
AcuI CTGAAG 2 cut(s) 218, 873
AdeI CACNNNGTG 1 cut(s) 770
AfaI GTAC 3 cut(s) 793, 937, 1241
AfiI CCNNNNNNNGG 1 cut(s) 976
AflIII ACRYGT 2 cut(s) 88, 379
AjnI CCWGG 2 cut(s) 970, 975
AjuI GAANNNNNNNTTGG 2 cut(s) 344, 376
AleI CACNNNNGTG 1 cut(s) 243
Alw21I GWGCWC 1 cut(s) 498
AlwI GGATC 2 cut(s) 625, 1233
AoxI GGCC 7 cut(s) 101, 174, 723, 757, 883, 973, 1039
ApeKI GCWGC 8 cut(s) 314, 317, 320, 323, 644, 782, 804, 980
ApoI RAATTY 2 cut(s) 345, 1262
AseI ATTAAT 1 cut(s) 630
Asp718I GGTACC 1 cut(s) 791
AspS9I GGNCC 3 cut(s) 139, 734, 1040
AsuHPI GGTGA 1 cut(s) 1046
AvaII GGWCC 2 cut(s) 139, 734
AxyI CCTNAGG 1 cut(s) 825
BaeGI GKGCMC 1 cut(s) 100
BalI TGGCCA 2 cut(s) 885, 975
BanI GGYRCC 2 cut(s) 791, 820
BarI GAAGNNNNNNTAC 2 cut(s) 1232, 1264
BauI CACGAG 1 cut(s) 151
BbsI GAAGAC 1 cut(s) 1239
Bbv12I GWGCWC 1 cut(s) 498
BbvI GCAGC 8 cut(s) 326, 329, 332, 335, 631, 791, 794, 992
BccI CCATC 2 cut(s) 410, 913
BceAI ACGGC 1 cut(s) 116
BciT130I CCWGG 2 cut(s) 972, 977
BfaI CTAG 2 cut(s) 719, 1067
BfmI CTRYAG 1 cut(s) 805
BfuAI ACCTGC 1 cut(s) 824
BglII AGATCT 1 cut(s) 1104
BisI GCNGC 9 cut(s) 315, 318, 321, 324, 645, 723, 783, 805, 981
BlsI GCNGC 9 cut(s) 316, 319, 322, 325, 646, 724, 784, 806, 982
BmcAI AGTACT 1 cut(s) 937
Bme1390I CCNGG 2 cut(s) 972, 977
Bme18I GGWCC 2 cut(s) 139, 734
BmgT120I GGNCC 3 cut(s) 139, 734, 1040
BmiI GGNNCC 4 cut(s) 140, 793, 822, 1042
BmrFI CCNGG 2 cut(s) 972, 977
BmsI GCATC 2 cut(s) 445, 932
BpiI GAAGAC 1 cut(s) 1239
Bpu10I CCTNAGC 1 cut(s) 1071
BsaBI GATNNNNATC 1 cut(s) 8
BsaJI CCNNGG 3 cut(s) 301, 613, 970
Bsc4I CCNNNNNNNGG 1 cut(s) 976
Bse118I RCCGGY 2 cut(s) 103, 176
Bse1I ACTGG 2 cut(s) 883, 943
Bse21I CCTNAGG 1 cut(s) 825
Bse8I GATNNNNATC 1 cut(s) 8
BseBI CCWGG 2 cut(s) 972, 977
BseDI CCNNGG 3 cut(s) 301, 613, 970
BseGI GGATG 4 cut(s) 59, 398, 607, 1197
BseJI GATNNNNATC 1 cut(s) 8
BseLI CCNNNNNNNGG 1 cut(s) 976
BseMII CTCAG 2 cut(s) 242, 705
BseNI ACTGG 2 cut(s) 883, 943
BseRI GAGGAG 4 cut(s) 70, 214, 345, 348
BseSI GKGCMC 1 cut(s) 100
BseX3I CGGCCG 1 cut(s) 101
BseXI GCAGC 8 cut(s) 326, 329, 332, 335, 631, 791, 794, 992
BsgI GTGCAG 1 cut(s) 555
Bsh1236I CGCG 1 cut(s) 90
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 7 cut(s) 103, 176, 725, 759, 885, 975, 1041
BshNI GGYRCC 2 cut(s) 791, 820
BsiEI CGRYCG 1 cut(s) 104
BsiHKAI GWGCWC 1 cut(s) 498
BsiSI CCGG 2 cut(s) 104, 177
BslFI GGGAC 4 cut(s) 124, 136, 142, 535
BslI CCNNNNNNNGG 1 cut(s) 976
BsmFI GGGAC 4 cut(s) 124, 136, 142, 535
BsnI GGCC 7 cut(s) 103, 176, 725, 759, 885, 975, 1041
Bsp1286I GDGCHC 2 cut(s) 100, 498
Bsp143I GATC 3 cut(s) 617, 1104, 1225
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 4 cut(s) 31, 94, 722, 1026
BspANI GGCC 7 cut(s) 103, 176, 725, 759, 885, 975, 1041
BspCNI CTCAG 2 cut(s) 241, 704
BspFNI CGCG 1 cut(s) 90
BspHI TCATGA 1 cut(s) 421
BspLI GGNNCC 4 cut(s) 140, 793, 822, 1042
BspMAI CTGCAG 1 cut(s) 809
BspMI ACCTGC 1 cut(s) 824
BspPI GGATC 2 cut(s) 625, 1233
BspT107I GGYRCC 2 cut(s) 791, 820
BsrBI CCGCTC 1 cut(s) 31
BsrFI RCCGGY 2 cut(s) 103, 176
BsrI ACTGG 2 cut(s) 883, 943
BssAI RCCGGY 2 cut(s) 103, 176
BssECI CCNNGG 3 cut(s) 301, 613, 970
BssMI GATC 3 cut(s) 617, 1104, 1225
BssSI CACGAG 1 cut(s) 151
BssT1I CCWWGG 2 cut(s) 301, 613
Bst2BI CACGAG 1 cut(s) 151
Bst2UI CCWGG 2 cut(s) 972, 977
Bst4CI ACNGT 4 cut(s) 360, 428, 565, 935
BstAPI GCANNNNNTGC 1 cut(s) 779
BstC8I GCNNGC 5 cut(s) 92, 96, 105, 178, 1026
BstDEI CTNAG 7 cut(s) 161, 228, 366, 691, 825, 994, 1071
BstDSI CCRYGG 1 cut(s) 301
BstF5I GGATG 4 cut(s) 59, 398, 607, 1197
BstFNI CGCG 1 cut(s) 90
BstKTI GATC 3 cut(s) 620, 1107, 1228
BstMBI GATC 3 cut(s) 617, 1104, 1225
BstMCI CGRYCG 1 cut(s) 104
BstMWI GCNNNNNNNGC 6 cut(s) 100, 104, 320, 323, 722, 779
BstNI CCWGG 2 cut(s) 972, 977
BstNSI RCATGY 1 cut(s) 383
BstSCI CCNGG 2 cut(s) 970, 975
BstSFI CTRYAG 1 cut(s) 805
BstSLI GKGCMC 1 cut(s) 100
BstUI CGCG 1 cut(s) 90
BstV1I GCAGC 8 cut(s) 326, 329, 332, 335, 631, 791, 794, 992
BstV2I GAAGAC 1 cut(s) 1239
BstX2I RGATCY 3 cut(s) 617, 1104, 1225
BstYI RGATCY 3 cut(s) 617, 1104, 1225
BstZI CGGCCG 1 cut(s) 101
Bsu36I CCTNAGG 1 cut(s) 825
BsuRI GGCC 7 cut(s) 103, 176, 725, 759, 885, 975, 1041
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 4 cut(s) 59, 398, 607, 1197
BveI ACCTGC 1 cut(s) 824
Cac8I GCNNGC 5 cut(s) 92, 96, 105, 178, 1026
CciI TCATGA 1 cut(s) 421
Cfr10I RCCGGY 2 cut(s) 103, 176
Cfr13I GGNCC 3 cut(s) 139, 734, 1040
Csp6I GTAC 3 cut(s) 792, 936, 1240
CviAII CATG 6 cut(s) 166, 302, 380, 422, 552, 1021
CviQI GTAC 3 cut(s) 792, 936, 1240
DdeI CTNAG 7 cut(s) 161, 228, 366, 691, 825, 994, 1071
DpnI GATC 3 cut(s) 619, 1106, 1227
DpnII GATC 3 cut(s) 617, 1104, 1225
DraI TTTAAA 1 cut(s) 699
DraIII CACNNNGTG 1 cut(s) 770
EaeI YGGCCR 4 cut(s) 101, 174, 883, 973
EagI CGGCCG 1 cut(s) 101
EclXI CGGCCG 1 cut(s) 101
Eco130I CCWWGG 2 cut(s) 301, 613
Eco147I AGGCCT 1 cut(s) 759
Eco47I GGWCC 2 cut(s) 139, 734
Eco52I CGGCCG 1 cut(s) 101
Eco57I CTGAAG 2 cut(s) 218, 873
Eco81I CCTNAGG 1 cut(s) 825
EcoO109I RGGNCCY 2 cut(s) 139, 1040
EcoRII CCWGG 2 cut(s) 970, 975
EcoT14I CCWWGG 2 cut(s) 301, 613
ErhI CCWWGG 2 cut(s) 301, 613
FaeI CATG 6 cut(s) 169, 305, 383, 425, 555, 1024
FaqI GGGAC 4 cut(s) 124, 136, 142, 535
FatI CATG 6 cut(s) 165, 301, 379, 421, 551, 1020
FauI CCCGC 2 cut(s) 87, 1033
FblI GTMKAC 1 cut(s) 195
Fnu4HI GCNGC 9 cut(s) 315, 318, 321, 324, 645, 723, 783, 805, 981
FokI GGATG 4 cut(s) 46, 385, 614, 1184
Fsp4HI GCNGC 9 cut(s) 315, 318, 321, 324, 645, 723, 783, 805, 981
FspBI CTAG 2 cut(s) 719, 1067
GluI GCNGC 9 cut(s) 315, 318, 321, 324, 645, 723, 783, 805, 981
HaeIII GGCC 7 cut(s) 103, 176, 725, 759, 885, 975, 1041
HapII CCGG 2 cut(s) 104, 177
Hin1II CATG 6 cut(s) 169, 305, 383, 425, 555, 1024
HincII GTYRAC 1 cut(s) 196
HindII GTYRAC 1 cut(s) 196
HindIII AAGCTT 2 cut(s) 204, 368
HinfI GANTC 3 cut(s) 9, 260, 548
HpaII CCGG 2 cut(s) 104, 177
HphI GGTGA 1 cut(s) 1046
Hpy166II GTNNAC 2 cut(s) 196, 363
Hpy188I TCNGA 5 cut(s) 694, 853, 931, 1008, 1192
Hpy188III TCNNGA 8 cut(s) 257, 270, 422, 545, 591, 732, 1229, 1268
Hpy8I GTNNAC 2 cut(s) 196, 363
HpyAV CCTTC 5 cut(s) 35, 697, 770, 848, 960
HpyCH4III ACNGT 4 cut(s) 360, 428, 565, 935
HpyF10VI GCNNNNNNNGC 6 cut(s) 100, 104, 320, 323, 722, 779
HpyF3I CTNAG 7 cut(s) 161, 228, 366, 691, 825, 994, 1071
Hsp92II CATG 6 cut(s) 169, 305, 383, 425, 555, 1024
KpnI GGTACC 1 cut(s) 795
KroI GCCGGC 2 cut(s) 103, 176
KroNI GCCGGC 2 cut(s) 105, 178
Kzo9I GATC 3 cut(s) 617, 1104, 1225
LmnI GCTCC 3 cut(s) 28, 311, 335
Lsp1109I GCAGC 8 cut(s) 326, 329, 332, 335, 631, 791, 794, 992
LweI GCATC 2 cut(s) 445, 932
MaeI CTAG 2 cut(s) 719, 1067
MaeIII GTNAC 2 cut(s) 382, 703
MalI GATC 3 cut(s) 619, 1106, 1227
MbiI CCGCTC 1 cut(s) 31
MboI GATC 3 cut(s) 617, 1104, 1225
MboII GAAGA 6 cut(s) 64, 840, 918, 1148, 1244, 1292
MflI RGATCY 3 cut(s) 617, 1104, 1225
MhlI GDGCHC 2 cut(s) 100, 498
MlsI TGGCCA 2 cut(s) 885, 975
MluCI AATT 9 cut(s) 189, 214, 252, 345, 594, 627, 840, 1262, 1283
MluI ACGCGT 1 cut(s) 88
MluNI TGGCCA 2 cut(s) 885, 975
MmeI TCCRAC 1 cut(s) 432
Mox20I TGGCCA 2 cut(s) 885, 975
MroNI GCCGGC 2 cut(s) 103, 176
MscI TGGCCA 2 cut(s) 885, 975
MseI TTAA 4 cut(s) 470, 630, 698, 798
MslI CAYNNNNRTG 3 cut(s) 243, 300, 426
Msp20I TGGCCA 2 cut(s) 885, 975
MspI CCGG 2 cut(s) 104, 177
MspR9I CCNGG 2 cut(s) 972, 977
MvaI CCWGG 2 cut(s) 972, 977
MvnI CGCG 1 cut(s) 90
MwoI GCNNNNNNNGC 6 cut(s) 100, 104, 320, 323, 722, 779
NaeI GCCGGC 2 cut(s) 105, 178
NcoI CCATGG 1 cut(s) 301
NdeII GATC 3 cut(s) 617, 1104, 1225
NgoMIV GCCGGC 2 cut(s) 103, 176
NlaIII CATG 6 cut(s) 169, 305, 383, 425, 555, 1024
NlaIV GGNNCC 4 cut(s) 140, 793, 822, 1042
NmuCI GTSAC 1 cut(s) 382
NspI RCATGY 1 cut(s) 383
OliI CACNNNNGTG 1 cut(s) 243
PagI TCATGA 1 cut(s) 421
PaqCI CACCTGC 1 cut(s) 824
PceI AGGCCT 1 cut(s) 759
PciI ACATGT 1 cut(s) 379
PdiI GCCGGC 2 cut(s) 105, 178
PfeI GAWTC 3 cut(s) 9, 260, 548
PkrI GCNGC 9 cut(s) 316, 319, 322, 325, 646, 724, 784, 806, 982
PpuMI RGGWCCY 1 cut(s) 139
PscI ACATGT 1 cut(s) 379
PshBI ATTAAT 1 cut(s) 630
Psp5II RGGWCCY 1 cut(s) 139
Psp6I CCWGG 2 cut(s) 970, 975
PspGI CCWGG 2 cut(s) 970, 975
PspN4I GGNNCC 4 cut(s) 140, 793, 822, 1042
PspPI GGNCC 3 cut(s) 139, 734, 1040
PspPPI RGGWCCY 1 cut(s) 139
PstI CTGCAG 1 cut(s) 809
PsuI RGATCY 3 cut(s) 617, 1104, 1225
RsaI GTAC 3 cut(s) 793, 937, 1241
RsaNI GTAC 3 cut(s) 792, 936, 1240
RseI CAYNNNNRTG 3 cut(s) 243, 300, 426
SalI GTCGAC 1 cut(s) 194
SaqAI TTAA 4 cut(s) 470, 630, 698, 798
SatI GCNGC 9 cut(s) 315, 318, 321, 324, 645, 723, 783, 805, 981
Sau3AI GATC 3 cut(s) 617, 1104, 1225
Sau96I GGNCC 3 cut(s) 139, 734, 1040
ScaI AGTACT 1 cut(s) 937
ScrFI CCNGG 2 cut(s) 972, 977
SduI GDGCHC 2 cut(s) 100, 498
SfaNI GCATC 2 cut(s) 445, 932
SfcI CTRYAG 1 cut(s) 805
SinI GGWCC 2 cut(s) 139, 734
SmiI ATTTAAAT 1 cut(s) 699
SmiMI CAYNNNNRTG 3 cut(s) 243, 300, 426
Sse9I AATT 9 cut(s) 189, 214, 252, 345, 594, 627, 840, 1262, 1283
SseBI AGGCCT 1 cut(s) 759
SsiI CCGC 4 cut(s) 31, 94, 722, 1026
SspMI CTAG 2 cut(s) 719, 1067
StuI AGGCCT 1 cut(s) 759
StyD4I CCNGG 2 cut(s) 970, 975
StyI CCWWGG 2 cut(s) 301, 613
SwaI ATTTAAAT 1 cut(s) 699
TaaI ACNGT 4 cut(s) 360, 428, 565, 935
TaqI TCGA 2 cut(s) 144, 195
TasI AATT 9 cut(s) 189, 214, 252, 345, 594, 627, 840, 1262, 1283
TatI WGTACW 2 cut(s) 935, 1239
TauI GCSGC 1 cut(s) 725
TfiI GAWTC 3 cut(s) 9, 260, 548
Tru1I TTAA 4 cut(s) 470, 630, 698, 798
Tru9I TTAA 4 cut(s) 470, 630, 698, 798
TseFI GTSAC 1 cut(s) 382
TseI GCWGC 8 cut(s) 314, 317, 320, 323, 644, 782, 804, 980
Tsp45I GTSAC 1 cut(s) 382
TspDTI ATGAA 7 cut(s) 25, 200, 410, 429, 540, 651, 1009
TspGWI ACGGA 2 cut(s) 128, 474
VpaK11BI GGWCC 2 cut(s) 139, 734
VspI ATTAAT 1 cut(s) 630
XapI RAATTY 2 cut(s) 345, 1262
XceI RCATGY 1 cut(s) 383
XmiI GTMKAC 1 cut(s) 195
XspI CTAG 2 cut(s) 719, 1067
ZrmI AGTACT 1 cut(s) 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.