Belongs to the helicase family. Dicer subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G43920 AT3G43920 AT3G43920 AT3G43920 AT3G43920 AT3G43920 |
| fragaria_vesca | FvH4_2g07790 FvH4_2g18930 FvH4_2g18930 FvH4_2g30780 FvH4_2g30780 FvH4_2g30780 FvH4_2g30780 |
| malus_domestica | MD08G1046300.v1.1 MD10G1163700.v1.1 MD15G1047500.v1.1 |
| prunus_persica | Prupe.1G401900_v2.0.a1 Prupe.1G401900_v2.0.a1 Prupe.8G202000_v2.0.a1 Prupe.8G202000_v2.0.a1 |
| pyrus_communis | pycom08g03830 pycom08g03840 pycom15g04670 |
| rosa_chinensis | RchiOBHm_Chr6g0284721 RchiOBHm_Chr6g0312121 |
| rosa_laevigata | RLG00000010353 RLG00000012724 |
| rosa_multiflora | Rmu_sc0004065.1_g000007 Rmu_sc0007474.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00157050 Rroxscaffold_7G00184440 |
| rosa_rugosa | Rorug06G0165900 Rorug06G0392600 Rorug06G0392700 Rorug06G0392800 |
| rosa_samantha | Rh4CG118000 Rh6AG279000 Rh6AG509700 Rh6BG279000 Rh6BG520600 Rh6CG281300 Rh6CG526600 Rh6DG274000 Rh6DG512000 |
| rosa_wichuraiana | Rw6G023980 Rw6G044350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2025 |
| Acc36I | ACCTGC | 2 cut(s) | 294, 1935 |
| Acc65I | GGTACC | 1 cut(s) | 2132 |
| AccB1I | GGYRCC | 3 cut(s) | 5, 2132, 2147 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2666 |
| AciI | CCGC | 4 cut(s) | 689, 947, 2381, 2718 |
| AclWI | GGATC | 3 cut(s) | 285, 566, 1964 |
| AcoI | YGGCCR | 1 cut(s) | 2798 |
| AcsI | RAATTY | 6 cut(s) | 377, 640, 1535, 1814, 1901, 2241 |
| AcuI | CTGAAG | 2 cut(s) | 2589, 2664 |
| AcyI | GRCGYC | 1 cut(s) | 2922 |
| AfaI | GTAC | 9 cut(s) | 109, 843, 872, 1521, 1763, 2134, 2336, 2394, 2873 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 824, 2129, 2517, 2666, 2807, 2918, 2957 |
| AjnI | CCWGG | 8 cut(s) | 372, 536, 907, 1260, 1462, 1972, 2690, 2806 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 257, 289, 2656, 2688 |
| Alw21I | GWGCWC | 2 cut(s) | 163, 900 |
| Alw26I | GTCTC | 8 cut(s) | 503, 665, 667, 1074, 1502, 1835, 2115, 2166 |
| AlwI | GGATC | 3 cut(s) | 285, 566, 1964 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 919, 2003, 2059, 2123 |
| AoxI | GGCC | 4 cut(s) | 1585, 1842, 2756, 2798 |
| ApeKI | GCWGC | 9 cut(s) | 681, 1024, 1182, 1302, 2053, 2290, 2462, 2654, 2978 |
| ApoI | RAATTY | 6 cut(s) | 377, 640, 1535, 1814, 1901, 2241 |
| AseI | ATTAAT | 1 cut(s) | 1167 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2373 |
| Asp718I | GGTACC | 1 cut(s) | 2132 |
| AspLEI | GCGC | 4 cut(s) | 1029, 1260, 1995, 2026 |
| AspS9I | GGNCC | 4 cut(s) | 1585, 1924, 2156, 2756 |
| AsuHPI | GGTGA | 5 cut(s) | 608, 986, 1286, 2378, 2555 |
| AsuII | TTCGAA | 1 cut(s) | 293 |
| AsuNHI | GCTAGC | 1 cut(s) | 1141 |
| AvaII | GGWCC | 2 cut(s) | 1924, 2156 |
| AxyI | CCTNAGG | 1 cut(s) | 2160 |
| BaeGI | GKGCMC | 2 cut(s) | 10, 45 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 732, 765, 2116, 2149 |
| BalI | TGGCCA | 1 cut(s) | 2800 |
| BanI | GGYRCC | 3 cut(s) | 5, 2132, 2147 |
| BbsI | GAAGAC | 2 cut(s) | 302, 1554 |
| Bbv12I | GWGCWC | 2 cut(s) | 163, 900 |
| BbvI | GCAGC | 9 cut(s) | 693, 1036, 1194, 1289, 2065, 2277, 2474, 2641, 2990 |
| BccI | CCATC | 9 cut(s) | 27, 149, 346, 487, 818, 853, 1117, 1424, 1587 |
| BceAI | ACGGC | 3 cut(s) | 1761, 2966, 3023 |
| BciT130I | CCWGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| BcoDI | GTCTC | 8 cut(s) | 503, 665, 667, 1074, 1502, 1835, 2115, 2166 |
| BfaI | CTAG | 8 cut(s) | 426, 1058, 1142, 1211, 1907, 2651, 2703, 2946 |
| BfmI | CTRYAG | 1 cut(s) | 2976 |
| BfoI | RGCGCY | 1 cut(s) | 1261 |
| BfuAI | ACCTGC | 2 cut(s) | 294, 1935 |
| BlpI | GCTNAGC | 1 cut(s) | 1996 |
| BmcAI | AGTACT | 2 cut(s) | 872, 2873 |
| Bme1390I | CCNGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| Bme18I | GGWCC | 2 cut(s) | 1924, 2156 |
| BmgT120I | GGNCC | 4 cut(s) | 1585, 1924, 2156, 2756 |
| BmiI | GGNNCC | 4 cut(s) | 7, 415, 2134, 2149 |
| BmrFI | CCNGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| BmrI | ACTGGG | 2 cut(s) | 23, 2717 |
| BmsI | GCATC | 9 cut(s) | 1128, 1723, 1757, 1865, 1951, 2065, 2078, 2518, 2932 |
| BmtI | GCTAGC | 1 cut(s) | 1145 |
| BmuI | ACTGGG | 2 cut(s) | 23, 2717 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1446 |
| BpiI | GAAGAC | 2 cut(s) | 302, 1554 |
| BpmI | CTGGAG | 7 cut(s) | 470, 559, 1446, 1859, 2033, 2439, 2688 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1050 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1996 |
| Bpu14I | TTCGAA | 1 cut(s) | 293 |
| BpuEI | CTTGAG | 3 cut(s) | 2306, 2462, 2507 |
| Bsa29I | ATCGAT | 2 cut(s) | 1968, 2072 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1968 |
| BsaHI | GRCGYC | 1 cut(s) | 2922 |
| BsaI | GGTCTC | 1 cut(s) | 1835 |
| BsaJI | CCNNGG | 3 cut(s) | 1463, 1722, 1824 |
| BsaWI | WCCGGW | 2 cut(s) | 320, 502 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2031, 2061, 2163, 2193 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 824, 2129, 2517, 2666, 2807, 2918, 2957 |
| Bse21I | CCTNAGG | 1 cut(s) | 2160 |
| Bse3DI | GCAATG | 1 cut(s) | 995 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1968 |
| BseBI | CCWGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| BseCI | ATCGAT | 2 cut(s) | 1968, 2072 |
| BseDI | CCNNGG | 3 cut(s) | 1463, 1722, 1824 |
| BseGI | GGATG | 2 cut(s) | 1602, 2533 |
| BseJI | GATNNNNATC | 1 cut(s) | 1968 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 824, 2129, 2517, 2666, 2807, 2918, 2957 |
| BseMI | GCAATG | 1 cut(s) | 995 |
| BseMII | CTCAG | 8 cut(s) | 660, 666, 792, 801, 858, 1041, 2010, 2843 |
| BseRI | GAGGAG | 1 cut(s) | 2504 |
| BseSI | GKGCMC | 2 cut(s) | 10, 45 |
| BseXI | GCAGC | 9 cut(s) | 693, 1036, 1194, 1289, 2065, 2277, 2474, 2641, 2990 |
| BsgI | GTGCAG | 2 cut(s) | 96, 700 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2434 |
| BshFI | GGCC | 4 cut(s) | 1587, 1844, 2758, 2800 |
| BshNI | GGYRCC | 3 cut(s) | 5, 2132, 2147 |
| BshVI | ATCGAT | 2 cut(s) | 1968, 2072 |
| BsiEI | CGRYCG | 1 cut(s) | 2434 |
| BsiHKAI | GWGCWC | 2 cut(s) | 163, 900 |
| BsiSI | CCGG | 3 cut(s) | 321, 503, 2919 |
| BslFI | GGGAC | 2 cut(s) | 1058, 1117 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 824, 2129, 2517, 2666, 2807, 2918, 2957 |
| BsmAI | GTCTC | 8 cut(s) | 503, 665, 667, 1074, 1502, 1835, 2115, 2166 |
| BsmBI | CGTCTC | 1 cut(s) | 1074 |
| BsmFI | GGGAC | 2 cut(s) | 1058, 1117 |
| BsmI | GAATGC | 2 cut(s) | 117, 2936 |
| BsnI | GGCC | 4 cut(s) | 1587, 1844, 2758, 2800 |
| Bso31I | GGTCTC | 1 cut(s) | 1835 |
| Bsp119I | TTCGAA | 1 cut(s) | 293 |
| Bsp1286I | GDGCHC | 4 cut(s) | 10, 45, 163, 900 |
| Bsp1407I | TGTACA | 1 cut(s) | 2392 |
| Bsp143I | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1996 |
| BspACI | CCGC | 4 cut(s) | 689, 947, 2381, 2718 |
| BspANI | GGCC | 4 cut(s) | 1587, 1844, 2758, 2800 |
| BspCNI | CTCAG | 8 cut(s) | 661, 667, 791, 802, 859, 1042, 2009, 2842 |
| BspDI | ATCGAT | 2 cut(s) | 1968, 2072 |
| BspLI | GGNNCC | 4 cut(s) | 7, 415, 2134, 2149 |
| BspMAI | CTGCAG | 1 cut(s) | 2980 |
| BspMI | ACCTGC | 2 cut(s) | 294, 1935 |
| BspOI | GCTAGC | 1 cut(s) | 1145 |
| BspPI | GGATC | 3 cut(s) | 285, 566, 1964 |
| BspT104I | TTCGAA | 1 cut(s) | 293 |
| BspT107I | GGYRCC | 3 cut(s) | 5, 2132, 2147 |
| BspTNI | GGTCTC | 1 cut(s) | 1835 |
| BsrDI | GCAATG | 1 cut(s) | 995 |
| BsrGI | TGTACA | 1 cut(s) | 2392 |
| BssECI | CCNNGG | 3 cut(s) | 1463, 1722, 1824 |
| BssMI | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| BssNI | GRCGYC | 1 cut(s) | 2922 |
| BssT1I | CCWWGG | 2 cut(s) | 1722, 1824 |
| Bst2UI | CCWGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| Bst6I | CTCTTC | 5 cut(s) | 1155, 1758, 2510, 2557, 3010 |
| BstACI | GRCGYC | 1 cut(s) | 2922 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2059 |
| BstAUI | TGTACA | 1 cut(s) | 2392 |
| BstBI | TTCGAA | 1 cut(s) | 293 |
| BstC8I | GCNNGC | 4 cut(s) | 249, 1143, 1361, 1668 |
| BstF5I | GGATG | 2 cut(s) | 1602, 2533 |
| BstH2I | RGCGCY | 1 cut(s) | 1261 |
| BstHHI | GCGC | 4 cut(s) | 1029, 1260, 1995, 2026 |
| BstKTI | GATC | 5 cut(s) | 280, 561, 1972, 2434, 2765 |
| BstMAI | GTCTC | 8 cut(s) | 503, 665, 667, 1074, 1502, 1835, 2115, 2166 |
| BstMBI | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| BstMCI | CGRYCG | 1 cut(s) | 2434 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 74, 922, 1051, 2030, 2059, 2774, 3007 |
| BstNI | CCWGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| BstNSI | RCATGY | 6 cut(s) | 1033, 1045, 1363, 1682, 1856, 2069 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1446 |
| BstSCI | CCNGG | 8 cut(s) | 372, 536, 907, 1260, 1462, 1972, 2690, 2806 |
| BstSFI | CTRYAG | 1 cut(s) | 2976 |
| BstSLI | GKGCMC | 2 cut(s) | 10, 45 |
| BstV1I | GCAGC | 9 cut(s) | 693, 1036, 1194, 1289, 2065, 2277, 2474, 2641, 2990 |
| BstV2I | GAAGAC | 2 cut(s) | 302, 1554 |
| BstX2I | RGATCY | 1 cut(s) | 277 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1452 |
| BstYI | RGATCY | 1 cut(s) | 277 |
| Bsu15I | ATCGAT | 2 cut(s) | 1968, 2072 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2160 |
| BsuRI | GGCC | 4 cut(s) | 1587, 1844, 2758, 2800 |
| BsuTUI | ATCGAT | 2 cut(s) | 1968, 2072 |
| BtgZI | GCGATG | 1 cut(s) | 1106 |
| BtsCI | GGATG | 2 cut(s) | 1602, 2533 |
| BtsI | GCAGTG | 2 cut(s) | 691, 2801 |
| BtsIMutI | CAGTG | 4 cut(s) | 211, 626, 691, 2801 |
| BveI | ACCTGC | 2 cut(s) | 294, 1935 |
| Cac8I | GCNNGC | 4 cut(s) | 249, 1143, 1361, 1668 |
| CaiI | CAGNNNCTG | 4 cut(s) | 919, 2003, 2059, 2123 |
| CfoI | GCGC | 4 cut(s) | 1029, 1260, 1995, 2026 |
| Cfr13I | GGNCC | 4 cut(s) | 1585, 1924, 2156, 2756 |
| ClaI | ATCGAT | 2 cut(s) | 1968, 2072 |
| CseI | GACGC | 1 cut(s) | 2911 |
| Csp6I | GTAC | 9 cut(s) | 108, 842, 871, 1520, 1762, 2133, 2335, 2393, 2872 |
| CviQI | GTAC | 9 cut(s) | 108, 842, 871, 1520, 1762, 2133, 2335, 2393, 2872 |
| DpnI | GATC | 5 cut(s) | 279, 560, 1971, 2433, 2764 |
| DpnII | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| DraI | TTTAAA | 2 cut(s) | 1287, 2815 |
| EaeI | YGGCCR | 1 cut(s) | 2798 |
| Eam1104I | CTCTTC | 5 cut(s) | 1155, 1758, 2510, 2557, 3010 |
| EarI | CTCTTC | 5 cut(s) | 1155, 1758, 2510, 2557, 3010 |
| Eco130I | CCWWGG | 2 cut(s) | 1722, 1824 |
| Eco31I | GGTCTC | 1 cut(s) | 1835 |
| Eco32I | GATATC | 2 cut(s) | 1194, 1966 |
| Eco47I | GGWCC | 2 cut(s) | 1924, 2156 |
| Eco57I | CTGAAG | 2 cut(s) | 2589, 2664 |
| Eco81I | CCTNAGG | 1 cut(s) | 2160 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2156, 2756 |
| EcoRI | GAATTC | 1 cut(s) | 640 |
| EcoRII | CCWGG | 8 cut(s) | 372, 536, 907, 1260, 1462, 1972, 2690, 2806 |
| EcoRV | GATATC | 2 cut(s) | 1194, 1966 |
| EcoT14I | CCWWGG | 2 cut(s) | 1722, 1824 |
| EcoT22I | ATGCAT | 2 cut(s) | 1858, 2071 |
| ErhI | CCWWGG | 2 cut(s) | 1722, 1824 |
| Esp3I | CGTCTC | 1 cut(s) | 1074 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 170, 202, 1817, 1849, 2795, 2827 |
| FaqI | GGGAC | 2 cut(s) | 1058, 1117 |
| FauI | CCCGC | 1 cut(s) | 682 |
| FokI | GGATG | 2 cut(s) | 1609, 2540 |
| FspBI | CTAG | 8 cut(s) | 426, 1058, 1142, 1211, 1907, 2651, 2703, 2946 |
| FspI | TGCGCA | 1 cut(s) | 2025 |
| GlaI | GCGC | 4 cut(s) | 1028, 1259, 1994, 2025 |
| GsuI | CTGGAG | 7 cut(s) | 470, 559, 1446, 1859, 2033, 2439, 2688 |
| HaeII | RGCGCY | 1 cut(s) | 1261 |
| HaeIII | GGCC | 4 cut(s) | 1587, 1844, 2758, 2800 |
| HapII | CCGG | 3 cut(s) | 321, 503, 2919 |
| HgaI | GACGC | 1 cut(s) | 2911 |
| HhaI | GCGC | 4 cut(s) | 1029, 1260, 1995, 2026 |
| Hin1I | GRCGYC | 1 cut(s) | 2922 |
| Hin6I | GCGC | 4 cut(s) | 1027, 1258, 1993, 2024 |
| HinP1I | GCGC | 4 cut(s) | 1027, 1258, 1993, 2024 |
| HincII | GTYRAC | 4 cut(s) | 1151, 1347, 1983, 2415 |
| HindII | GTYRAC | 4 cut(s) | 1151, 1347, 1983, 2415 |
| HindIII | AAGCTT | 3 cut(s) | 66, 245, 1802 |
| HpaI | GTTAAC | 2 cut(s) | 1347, 1983 |
| HpaII | CCGG | 3 cut(s) | 321, 503, 2919 |
| HphI | GGTGA | 5 cut(s) | 608, 986, 1286, 2378, 2555 |
| Hpy166II | GTNNAC | 9 cut(s) | 474, 700, 964, 1151, 1347, 1764, 1983, 2415, 2474 |
| Hpy188I | TCNGA | 8 cut(s) | 670, 868, 1618, 1861, 2091, 2119, 2436, 2968 |
| Hpy188III | TCNNGA | 9 cut(s) | 132, 219, 1211, 1872, 2225, 2276, 2479, 2835, 2996 |
| Hpy8I | GTNNAC | 9 cut(s) | 474, 700, 964, 1151, 1347, 1764, 1983, 2415, 2474 |
| Hpy99I | CGWCG | 2 cut(s) | 2472, 2987 |
| HpyAV | CCTTC | 7 cut(s) | 88, 965, 971, 1014, 1331, 1728, 2688 |
| HpyCH4IV | ACGT | 1 cut(s) | 1083 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 74, 922, 1051, 2030, 2059, 2774, 3007 |
| HpySE526I | ACGT | 1 cut(s) | 1083 |
| Hsp92I | GRCGYC | 1 cut(s) | 2922 |
| HspAI | GCGC | 4 cut(s) | 1027, 1258, 1993, 2024 |
| KpnI | GGTACC | 1 cut(s) | 2136 |
| KspAI | GTTAAC | 2 cut(s) | 1347, 1983 |
| Kzo9I | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| LmnI | GCTCC | 7 cut(s) | 903, 1255, 1465, 1640, 2305, 2383, 2662 |
| Lsp1109I | GCAGC | 9 cut(s) | 693, 1036, 1194, 1289, 2065, 2277, 2474, 2641, 2990 |
| LweI | GCATC | 9 cut(s) | 1128, 1723, 1757, 1865, 1951, 2065, 2078, 2518, 2932 |
| MaeI | CTAG | 8 cut(s) | 426, 1058, 1142, 1211, 1907, 2651, 2703, 2946 |
| MaeII | ACGT | 1 cut(s) | 1083 |
| MalI | GATC | 5 cut(s) | 279, 560, 1971, 2433, 2764 |
| MboI | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| MfeI | CAATTG | 1 cut(s) | 2265 |
| MflI | RGATCY | 1 cut(s) | 277 |
| MhlI | GDGCHC | 4 cut(s) | 10, 45, 163, 900 |
| MlsI | TGGCCA | 1 cut(s) | 2800 |
| MluNI | TGGCCA | 1 cut(s) | 2800 |
| MlyI | GAGTC | 6 cut(s) | 469, 823, 1139, 1805, 1907, 2266 |
| MmeI | TCCRAC | 2 cut(s) | 1546, 1902 |
| Mox20I | TGGCCA | 1 cut(s) | 2800 |
| Mph1103I | ATGCAT | 2 cut(s) | 1858, 2071 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2373 |
| MscI | TGGCCA | 1 cut(s) | 2800 |
| MslI | CAYNNNNRTG | 3 cut(s) | 38, 122, 1231 |
| Msp20I | TGGCCA | 1 cut(s) | 2800 |
| MspI | CCGG | 3 cut(s) | 321, 503, 2919 |
| MspR9I | CCNGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| MunI | CAATTG | 1 cut(s) | 2265 |
| Mva1269I | GAATGC | 2 cut(s) | 117, 2936 |
| MvaI | CCWGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 74, 922, 1051, 2030, 2059, 2774, 3007 |
| NdeII | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| NheI | GCTAGC | 1 cut(s) | 1141 |
| NlaIV | GGNNCC | 4 cut(s) | 7, 415, 2134, 2149 |
| NmuCI | GTSAC | 3 cut(s) | 614, 1060, 2269 |
| NsbI | TGCGCA | 1 cut(s) | 2025 |
| NsiI | ATGCAT | 2 cut(s) | 1858, 2071 |
| NspI | RCATGY | 6 cut(s) | 1033, 1045, 1363, 1682, 1856, 2069 |
| NspV | TTCGAA | 1 cut(s) | 293 |
| PaeI | GCATGC | 1 cut(s) | 1363 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1766, 1974 |
| PctI | GAATGC | 2 cut(s) | 117, 2936 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2373 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2666 |
| PfoI | TCCNGGA | 2 cut(s) | 372, 536 |
| Ple19I | CGATCG | 1 cut(s) | 2434 |
| PleI | GAGTC | 6 cut(s) | 469, 822, 1138, 1804, 1907, 2266 |
| PpsI | GAGTC | 6 cut(s) | 469, 822, 1138, 1804, 1907, 2266 |
| PpuMI | RGGWCCY | 1 cut(s) | 2156 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1446 |
| PshBI | ATTAAT | 1 cut(s) | 1167 |
| Psp5II | RGGWCCY | 1 cut(s) | 2156 |
| Psp6I | CCWGG | 8 cut(s) | 372, 536, 907, 1260, 1462, 1972, 2690, 2806 |
| PspGI | CCWGG | 8 cut(s) | 372, 536, 907, 1260, 1462, 1972, 2690, 2806 |
| PspN4I | GGNNCC | 4 cut(s) | 7, 415, 2134, 2149 |
| PspPI | GGNCC | 4 cut(s) | 1585, 1924, 2156, 2756 |
| PspPPI | RGGWCCY | 1 cut(s) | 2156 |
| PstI | CTGCAG | 1 cut(s) | 2980 |
| PstNI | CAGNNNCTG | 4 cut(s) | 919, 2003, 2059, 2123 |
| PsuI | RGATCY | 1 cut(s) | 277 |
| PvuI | CGATCG | 1 cut(s) | 2434 |
| RsaI | GTAC | 9 cut(s) | 109, 843, 872, 1521, 1763, 2134, 2336, 2394, 2873 |
| RsaNI | GTAC | 9 cut(s) | 108, 842, 871, 1520, 1762, 2133, 2335, 2393, 2872 |
| RseI | CAYNNNNRTG | 3 cut(s) | 38, 122, 1231 |
| Sau3AI | GATC | 5 cut(s) | 277, 558, 1969, 2431, 2762 |
| Sau96I | GGNCC | 4 cut(s) | 1585, 1924, 2156, 2756 |
| ScaI | AGTACT | 2 cut(s) | 872, 2873 |
| SchI | GAGTC | 6 cut(s) | 469, 823, 1139, 1805, 1907, 2266 |
| ScrFI | CCNGG | 8 cut(s) | 374, 538, 909, 1262, 1464, 1974, 2692, 2808 |
| SduI | GDGCHC | 4 cut(s) | 10, 45, 163, 900 |
| SfaNI | GCATC | 9 cut(s) | 1128, 1723, 1757, 1865, 1951, 2065, 2078, 2518, 2932 |
| SfcI | CTRYAG | 1 cut(s) | 2976 |
| SfuI | TTCGAA | 1 cut(s) | 293 |
| SinI | GGWCC | 2 cut(s) | 1924, 2156 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 38, 122, 1231 |
| SmlI | CTYRAG | 3 cut(s) | 2285, 2477, 2486 |
| SmoI | CTYRAG | 3 cut(s) | 2285, 2477, 2486 |
| SphI | GCATGC | 1 cut(s) | 1363 |
| SsiI | CCGC | 4 cut(s) | 689, 947, 2381, 2718 |
| SspI | AATATT | 1 cut(s) | 199 |
| SspMI | CTAG | 8 cut(s) | 426, 1058, 1142, 1211, 1907, 2651, 2703, 2946 |
| StyD4I | CCNGG | 8 cut(s) | 372, 536, 907, 1260, 1462, 1972, 2690, 2806 |
| StyI | CCWWGG | 2 cut(s) | 1722, 1824 |
| TaiI | ACGT | 1 cut(s) | 1086 |
| TaqI | TCGA | 6 cut(s) | 293, 1695, 1769, 1968, 2072, 2761 |
| TatI | WGTACW | 3 cut(s) | 870, 2392, 2871 |
| TauI | GCSGC | 1 cut(s) | 2720 |
| TscAI | CASTG | 4 cut(s) | 211, 626, 691, 2801 |
| TseFI | GTSAC | 3 cut(s) | 614, 1060, 2269 |
| TseI | GCWGC | 9 cut(s) | 681, 1024, 1182, 1302, 2053, 2290, 2462, 2654, 2978 |
| Tsp45I | GTSAC | 3 cut(s) | 614, 1060, 2269 |
| TspGWI | ACGGA | 1 cut(s) | 1415 |
| TspRI | CASTG | 4 cut(s) | 211, 626, 691, 2801 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2666 |
| VpaK11BI | GGWCC | 2 cut(s) | 1924, 2156 |
| VspI | ATTAAT | 1 cut(s) | 1167 |
| XapI | RAATTY | 6 cut(s) | 377, 640, 1535, 1814, 1901, 2241 |
| XbaI | TCTAGA | 1 cut(s) | 1210 |
| XceI | RCATGY | 6 cut(s) | 1033, 1045, 1363, 1682, 1856, 2069 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2373 |
| XspI | CTAG | 8 cut(s) | 426, 1058, 1142, 1211, 1907, 2651, 2703, 2946 |
| ZrmI | AGTACT | 2 cut(s) | 872, 2873 |
| Zsp2I | ATGCAT | 2 cut(s) | 1858, 2071 |