Rorug06G0392700

Belongs to the helicase family. Dicer subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001909
Physical Location & Seq
Forward (+)
53816553 .. 53820155
3603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0392700.1

Sequence Viewer

Length: 2109 bp
ATGTGGAGGCGAGTAGTGTCCTCATCATCGGCTCAGCTTCAAACTCTTGCCTCACCCCCATGCAGATCCAGCCGTCCATTCCTCATATATTCATCATCTTCCTCGGCAATGGCACCGTTTCAGGGATCCTTTACTCTGTCATCCTTCCACACTTCTTTCGCTTCCTCCTCTAGTTCTGCATTTGCTACAAATCATGAGCATGATGAAGTTGAATCCGAGTTTGAGGGAAGGAACACTACATCCAGGCAGAGTGCAACATACAGTGGGTATTACGGTCAAAATAATCAGCAGTGGCAACAGAACCCAAATGTGGTTTATGCTGATAGTTCAAGGGCTCCCCAGCAGAGCTCAAATCAGTTTAGTCAGAATTACAGCGGGGGTTTCAAGGGAAGCACAGGCAATGAATTTGTGAATAACCCAGTTCAACAAAGTGGAAACTTTAGTGGGTATCATGGGCATGAAAATGGAAGGTTTCAGCAAACCACCCAACAAAATTGGAAACAATTAGGAAATGGAAGTATGCAGCAGAATTCATACATGGCTCGCCAGGAAAGGCCAAGGGAAGTGGGACAGATTCCAGATGGTTTTAACTCACAAATCAATTCAGGATCTCAGGGAAGCATAAGCCGCAGTTCTATGCACAACTCTGCAGAATATCAGCAAAATACAATCAGTTATAACAGAGGGATCAGTTCTGCACAAAAGCAGCAAAATTTAAGTGATTATTACAAAGATAATGGACAGTATCAGCAGAGTGTTGGTTATGGACAGTATCAGTCAAGCTCACGCGTCGGCGAATATCAGCAAACCCCAAATGTTGGACAATATCAGCAAACCCCCCAGGTTGGACAATATCAGCAAAGCCCACAGGCTGGACAACCAGCTGAGGCTTCTGAAAGTAACCCTAATAGTGTTAAGGGTACTCTTGAAGAGTTGGATTTGTTTTGCAAGGAGGGGAAAGTTAAGGAGGCTGTGGAGGTCTTGGATCTGCTGGAGAGACAGCATTTGCACGTGAACTTGGACAGATATTTACAGTTGATGCATGCGTGTGGGGAGGCTATAGCTCTCGAAGAAGCAACATCTGTTCATGAAAAGATGAGATTACTGTTTCCTTTGGAAGTGAGCACCTACAACAGAATTTTAGAGATGTATTCAAAATGTGGTTCTATGGAGAATGCATTAATGGTTTTCAATGATATGCCGAAGCGCAATATGACGTCTTGGGACATTATGATAACATGTCTTGCTAGGAATGGTCATGGGGAAGATGCCATTGATCTATTTACTCAGTTCAAGAAAGCAGGGCTGAAACCTGACAGTCAAATGTTTATTGGGGTTTTCCATGCTTGTAGTGTTGTGGGAGATGCTGATGAAGGATTACTGCATTTTGAATCAATGAGCAAAGATTATGGCATTGTCCCAACCATGGATCATTATGTGAGTGTAGTAGATATGCTCGGATCTATCGGTTTGCTGGATGAGGCTTTGGAGTTCATTGAAAAAATGCCATTGGAACCTAATGTTGATGTTTGGAAAACCTTGATGCATTTTTGCAGAGTTCATGGGTACTTGGAGCTTGGGGATCGTTGTGCTGAGCTAGTTGATCAGCTAGATCCCTCCTGCTTAAATGAGCAATCAAAGGCTGGCCTGGTTCCTGTGAATGAATCAGACCTCGTAAAGGAGAAAGAGAAGAAACAATTAGCAGCAAAGAATCTTTTAGAAATCAGGAGTCGAGTCCATGAATATAGAGCAGGAGACAGATCTCATCCTGATAATGAGAAGTTTTACACTCTACTTAGGGGTTTGAGGGAACAAATGAAGGAGGCTGGTTACATTCCAGAGACTAGATTTGTGTTGCATGACATAGATCAGGAAGGCAAGGAAGATGCTTTGCTTAGCCATAGTGAGAGACTTGCTGTTGCTGATGGTCTCCTCGCCAGCTCAGCTCGTTCACCTATTAGGGTAATCAAGAATCTTCGTGTTTGTGGTGATTGCCACTCTGCGTTAAAGATCATTTCCAAAATTGTAGGTAGAGAACTTATTATGCGAGATGCTAAGAGGTTCCACCATCTCAAAGATGGCAAGTGCTCTTGCAATGATTATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0003725 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004525 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006259 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009892 GO:0009987 GO:0010033 GO:0010216 GO:0010267 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016442 GO:0016458 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031332 GO:0031974 GO:0031981 GO:0032296 GO:0032991 GO:0034641 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0048519 GO:0050789 GO:0050896 GO:0051214 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0097159 GO:0098542 GO:0098586 GO:0140098 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko05206 map05206
Pfam Domains
Protein Families
DEAD Dicer_dimer Helicase_C PAZ ResIII Ribonuclease_3 dsrm

Protein Analysis

702

Amino Acids

78.87

Weight (kDa)

5.88

Isoelectric Point (pI)

48.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 374 - 405 1.6e-06 PPR repeat family
PPR_2 PF13041 404 - 450 1.1e-06 PPR repeat family
DYW_deaminase PF14432 610 - 702 3.5e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
AatII GACGTC 1 cut(s) 1220
AccB1I GGYRCC 1 cut(s) 112
AccB7I CCANNNNNTGG 2 cut(s) 818, 872
AccII CGCG 1 cut(s) 789
AciI CCGC 2 cut(s) 375, 628
AcsI RAATTY 4 cut(s) 404, 529, 712, 1137
AcvI CACGTG 1 cut(s) 1012
AcyI GRCGYC 1 cut(s) 1217
AfaI GTAC 2 cut(s) 922, 1568
AfiI CCNNNNNNNGG 7 cut(s) 122, 310, 818, 845, 872, 1426, 1678
AflIII ACRYGT 2 cut(s) 787, 1238
AjnI CCWGG 4 cut(s) 242, 546, 840, 1647
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
Alw21I GWGCWC 3 cut(s) 350, 1127, 2090
Alw26I GTCTC 5 cut(s) 991, 1749, 1835, 1903, 1934
AoxI GGCC 2 cut(s) 554, 1645
ApeKI GCWGC 3 cut(s) 523, 706, 1703
ApoI RAATTY 4 cut(s) 404, 529, 712, 1137
AseI ATTAAT 1 cut(s) 1181
AspLEI GCGC 1 cut(s) 1209
AsuHPI GGTGA 3 cut(s) 45, 1944, 2000
BamHI GGATCC 1 cut(s) 125
BanI GGYRCC 1 cut(s) 112
BanII GRGCYC 2 cut(s) 337, 350
BarI GAAGNNNNNNTAC 2 cut(s) 220, 252
BbrPI CACGTG 1 cut(s) 1012
Bbv12I GWGCWC 3 cut(s) 350, 1127, 2090
BbvCI CCTCAGC 1 cut(s) 885
BbvI GCAGC 3 cut(s) 535, 718, 1715
BccI CCATC 4 cut(s) 575, 1919, 2072, 2076
BceAI ACGGC 1 cut(s) 57
BciT130I CCWGG 4 cut(s) 244, 548, 842, 1649
BclI TGATCA 1 cut(s) 1603
BcoDI GTCTC 5 cut(s) 991, 1749, 1835, 1903, 1934
BfaI CTAG 5 cut(s) 171, 1248, 1598, 1610, 1845
BfmI CTRYAG 2 cut(s) 648, 1059
BglII AGATCT 1 cut(s) 1760
BisI GCNGC 4 cut(s) 524, 628, 707, 1704
BlpI GCTNAGC 4 cut(s) 33, 1593, 1895, 1942
BlsI GCNGC 4 cut(s) 525, 629, 708, 1705
Bme1390I CCNGG 4 cut(s) 244, 548, 842, 1649
BmiI GGNNCC 6 cut(s) 114, 127, 336, 1515, 1653, 2063
BmrFI CCNGG 4 cut(s) 244, 548, 842, 1649
BmrI ACTGGG 1 cut(s) 413
BmsI GCATC 6 cut(s) 1029, 1258, 1354, 1533, 1876, 2041
BmuI ACTGGG 1 cut(s) 413
BpmI CTGGAG 1 cut(s) 1013
Bpu10I CCTNAGC 1 cut(s) 885
Bpu1102I GCTNAGC 4 cut(s) 33, 1593, 1895, 1942
BsaAI YACGTR 1 cut(s) 1012
BsaHI GRCGYC 1 cut(s) 1217
BsaI GGTCTC 1 cut(s) 1934
BsaJI CCNNGG 4 cut(s) 102, 557, 840, 1425
Bsc4I CCNNNNNNNGG 7 cut(s) 122, 310, 818, 845, 872, 1426, 1678
Bse1I ACTGG 1 cut(s) 419
Bse3DI GCAATG 3 cut(s) 114, 406, 2101
BseBI CCWGG 4 cut(s) 244, 548, 842, 1649
BseDI CCNNGG 4 cut(s) 102, 557, 840, 1425
BseGI GGATG 4 cut(s) 140, 239, 1483, 1765
BseLI CCNNNNNNNGG 7 cut(s) 122, 310, 818, 845, 872, 1426, 1678
BseMI GCAATG 3 cut(s) 114, 406, 2101
BseMII CTCAG 6 cut(s) 47, 626, 876, 1301, 1584, 1956
BseNI ACTGG 1 cut(s) 419
BseRI GAGGAG 2 cut(s) 157, 1922
BseXI GCAGC 3 cut(s) 535, 718, 1715
BseYI CCCAGC 1 cut(s) 339
BsgI GTGCAG 1 cut(s) 681
Bsh1236I CGCG 1 cut(s) 789
BshFI GGCC 2 cut(s) 556, 1647
BshNI GGYRCC 1 cut(s) 112
BsiHKAI GWGCWC 3 cut(s) 350, 1127, 2090
BslFI GGGAC 3 cut(s) 582, 1238, 1403
BslI CCNNNNNNNGG 7 cut(s) 122, 310, 818, 845, 872, 1426, 1678
BsmAI GTCTC 5 cut(s) 991, 1749, 1835, 1903, 1934
BsmFI GGGAC 3 cut(s) 582, 1238, 1403
BsmI GAATGC 1 cut(s) 1180
BsnI GGCC 2 cut(s) 556, 1647
Bso31I GGTCTC 1 cut(s) 1934
Bsp1286I GDGCHC 4 cut(s) 337, 350, 1127, 2090
Bsp1720I GCTNAGC 4 cut(s) 33, 1593, 1895, 1942
Bsp19I CCATGG 1 cut(s) 1425
BspACI CCGC 2 cut(s) 375, 628
BspANI GGCC 2 cut(s) 556, 1647
BspCNI CTCAG 6 cut(s) 46, 625, 877, 1300, 1585, 1955
BspFNI CGCG 1 cut(s) 789
BspHI TCATGA 2 cut(s) 193, 1087
BspLI GGNNCC 6 cut(s) 114, 127, 336, 1515, 1653, 2063
BspMAI CTGCAG 1 cut(s) 652
BspT107I GGYRCC 1 cut(s) 112
BspTNI GGTCTC 1 cut(s) 1934
BsrDI GCAATG 3 cut(s) 114, 406, 2101
BsrI ACTGG 1 cut(s) 419
BssECI CCNNGG 4 cut(s) 102, 557, 840, 1425
BssNI GRCGYC 1 cut(s) 1217
BssT1I CCWWGG 2 cut(s) 557, 1425
Bst2UI CCWGG 4 cut(s) 244, 548, 842, 1649
Bst4CI ACNGT 8 cut(s) 117, 263, 275, 744, 771, 1035, 1107, 1319
Bst6I CTCTTC 1 cut(s) 924
BstACI GRCGYC 1 cut(s) 1217
BstBAI YACGTR 1 cut(s) 1012
BstC8I GCNNGC 4 cut(s) 544, 1044, 1645, 1939
BstDEI CTNAG 9 cut(s) 33, 612, 885, 1287, 1593, 1796, 1895, 1942, 2055
BstDSI CCRYGG 1 cut(s) 1425
BstENI CCTNNNNNAGG 1 cut(s) 1676
BstF5I GGATG 4 cut(s) 140, 239, 1483, 1765
BstFNI CGCG 1 cut(s) 789
BstHHI GCGC 1 cut(s) 1209
BstMAI GTCTC 5 cut(s) 991, 1749, 1835, 1903, 1934
BstMWI GCNNNNNNNGC 3 cut(s) 69, 627, 1943
BstNI CCWGG 4 cut(s) 244, 548, 842, 1649
BstNSI RCATGY 2 cut(s) 1046, 1242
BstSCI CCNGG 4 cut(s) 242, 546, 840, 1647
BstSFI CTRYAG 2 cut(s) 648, 1059
BstUI CGCG 1 cut(s) 789
BstV1I GCAGC 3 cut(s) 535, 718, 1715
BstX2I RGATCY 7 cut(s) 65, 125, 608, 985, 1460, 1612, 1760
BstYI RGATCY 7 cut(s) 65, 125, 608, 985, 1460, 1612, 1760
BsuRI GGCC 2 cut(s) 556, 1647
BtgI CCRYGG 1 cut(s) 1425
BtsCI GGATG 4 cut(s) 140, 239, 1483, 1765
BtsI GCAGTG 1 cut(s) 296
BtsIMutI CAGTG 2 cut(s) 268, 296
Cac8I GCNNGC 4 cut(s) 544, 1044, 1645, 1939
CciI TCATGA 2 cut(s) 193, 1087
CfoI GCGC 1 cut(s) 1209
CseI GACGC 1 cut(s) 778
Csp6I GTAC 2 cut(s) 921, 1567
CspCI CAANNNNNGTGG 2 cut(s) 546, 581
CviQI GTAC 2 cut(s) 921, 1567
DdeI CTNAG 9 cut(s) 33, 612, 885, 1287, 1593, 1796, 1895, 1942, 2055
Eam1104I CTCTTC 1 cut(s) 924
EarI CTCTTC 1 cut(s) 924
Ecl136II GAGCTC 1 cut(s) 348
Eco130I CCWWGG 2 cut(s) 557, 1425
Eco24I GRGCYC 2 cut(s) 337, 350
Eco31I GGTCTC 1 cut(s) 1934
Eco53kI GAGCTC 1 cut(s) 348
Eco72I CACGTG 1 cut(s) 1012
EcoICRI GAGCTC 1 cut(s) 348
EcoNI CCTNNNNNAGG 1 cut(s) 1676
EcoRI GAATTC 1 cut(s) 529
EcoRII CCWGG 4 cut(s) 242, 546, 840, 1647
EcoT14I CCWWGG 2 cut(s) 557, 1425
EcoT22I ATGCAT 3 cut(s) 1044, 1180, 1548
EcoT38I GRGCYC 2 cut(s) 337, 350
ErhI CCWWGG 2 cut(s) 557, 1425
FaqI GGGAC 3 cut(s) 582, 1238, 1403
FauI CCCGC 1 cut(s) 368
FbaI TGATCA 1 cut(s) 1603
Fnu4HI GCNGC 4 cut(s) 524, 628, 707, 1704
FokI GGATG 4 cut(s) 127, 226, 1490, 1752
FriOI GRGCYC 2 cut(s) 337, 350
Fsp4HI GCNGC 4 cut(s) 524, 628, 707, 1704
FspBI CTAG 5 cut(s) 171, 1248, 1598, 1610, 1845
GlaI GCGC 1 cut(s) 1208
GluI GCNGC 4 cut(s) 524, 628, 707, 1704
GsaI CCCAGC 1 cut(s) 343
GsuI CTGGAG 1 cut(s) 1013
HaeIII GGCC 2 cut(s) 556, 1647
HgaI GACGC 1 cut(s) 778
HhaI GCGC 1 cut(s) 1209
Hin1I GRCGYC 1 cut(s) 1217
Hin6I GCGC 1 cut(s) 1207
HinP1I GCGC 1 cut(s) 1207
HinfI GANTC 8 cut(s) 212, 574, 1391, 1664, 1711, 1729, 1734, 1972
HphI GGTGA 3 cut(s) 45, 1944, 2000
Hpy166II GTNNAC 2 cut(s) 1015, 1952
Hpy188I TCNGA 5 cut(s) 217, 366, 895, 1460, 1669
Hpy8I GTNNAC 2 cut(s) 1015, 1952
Hpy99I CGWCG 1 cut(s) 794
HpyAV CCTTC 6 cut(s) 154, 222, 462, 1367, 1813, 1868
HpyCH4III ACNGT 8 cut(s) 117, 263, 275, 744, 771, 1035, 1107, 1319
HpyCH4IV ACGT 2 cut(s) 1011, 1217
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 627, 1943
HpyF3I CTNAG 9 cut(s) 33, 612, 885, 1287, 1593, 1796, 1895, 1942, 2055
HpySE526I ACGT 2 cut(s) 1011, 1217
Hsp92I GRCGYC 1 cut(s) 1217
HspAI GCGC 1 cut(s) 1207
Ksp22I TGATCA 1 cut(s) 1603
LmnI GCTCC 2 cut(s) 340, 1573
Lsp1109I GCAGC 3 cut(s) 535, 718, 1715
LweI GCATC 6 cut(s) 1029, 1258, 1354, 1533, 1876, 2041
MaeI CTAG 5 cut(s) 171, 1248, 1598, 1610, 1845
MaeII ACGT 2 cut(s) 1011, 1217
MaeIII GTNAC 2 cut(s) 899, 1829
MboII GAAGA 7 cut(s) 90, 941, 1082, 1277, 1702, 1895, 1967
MflI RGATCY 7 cut(s) 65, 125, 608, 985, 1460, 1612, 1760
MhlI GDGCHC 4 cut(s) 337, 350, 1127, 2090
MluI ACGCGT 1 cut(s) 787
MlyI GAGTC 2 cut(s) 1738, 1743
MmeI TCCRAC 3 cut(s) 799, 826, 915
Mph1103I ATGCAT 3 cut(s) 1044, 1180, 1548
MseI TTAA 7 cut(s) 588, 716, 915, 963, 1181, 1625, 2006
MslI CAYNNNNRTG 5 cut(s) 58, 198, 456, 462, 1047
MspA1I CMGCKG 2 cut(s) 375, 884
MspR9I CCNGG 4 cut(s) 244, 548, 842, 1649
Mva1269I GAATGC 1 cut(s) 1180
MvaI CCWGG 4 cut(s) 244, 548, 842, 1649
MvnI CGCG 1 cut(s) 789
MwoI GCNNNNNNNGC 3 cut(s) 69, 627, 1943
NcoI CCATGG 1 cut(s) 1425
NlaIV GGNNCC 6 cut(s) 114, 127, 336, 1515, 1653, 2063
NmeAIII GCCGAG 1 cut(s) 83
NsiI ATGCAT 3 cut(s) 1044, 1180, 1548
NspI RCATGY 2 cut(s) 1046, 1242
PaeI GCATGC 1 cut(s) 1046
PagI TCATGA 2 cut(s) 193, 1087
PciI ACATGT 1 cut(s) 1238
PctI GAATGC 1 cut(s) 1180
PfeI GAWTC 6 cut(s) 212, 574, 1391, 1664, 1711, 1972
PflMI CCANNNNNTGG 2 cut(s) 818, 872
PkrI GCNGC 4 cut(s) 525, 629, 708, 1705
PleI GAGTC 2 cut(s) 1737, 1742
PmaCI CACGTG 1 cut(s) 1012
PmlI CACGTG 1 cut(s) 1012
PpsI GAGTC 2 cut(s) 1737, 1742
Ppu21I YACGTR 1 cut(s) 1012
PscI ACATGT 1 cut(s) 1238
PshBI ATTAAT 1 cut(s) 1181
PsiI TTATAA 1 cut(s) 678
Psp124BI GAGCTC 1 cut(s) 350
Psp6I CCWGG 4 cut(s) 242, 546, 840, 1647
PspCI CACGTG 1 cut(s) 1012
PspFI CCCAGC 1 cut(s) 339
PspGI CCWGG 4 cut(s) 242, 546, 840, 1647
PspN4I GGNNCC 6 cut(s) 114, 127, 336, 1515, 1653, 2063
PstI CTGCAG 1 cut(s) 652
PsuI RGATCY 7 cut(s) 65, 125, 608, 985, 1460, 1612, 1760
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 2 cut(s) 922, 1568
RsaNI GTAC 2 cut(s) 921, 1567
RseI CAYNNNNRTG 5 cut(s) 58, 198, 456, 462, 1047
SacI GAGCTC 1 cut(s) 350
SaqAI TTAA 7 cut(s) 588, 716, 915, 963, 1181, 1625, 2006
SatI GCNGC 4 cut(s) 524, 628, 707, 1704
SchI GAGTC 2 cut(s) 1738, 1743
ScrFI CCNGG 4 cut(s) 244, 548, 842, 1649
SduI GDGCHC 4 cut(s) 337, 350, 1127, 2090
SfaNI GCATC 6 cut(s) 1029, 1258, 1354, 1533, 1876, 2041
SfcI CTRYAG 2 cut(s) 648, 1059
SmiMI CAYNNNNRTG 5 cut(s) 58, 198, 456, 462, 1047
SphI GCATGC 1 cut(s) 1046
SsiI CCGC 2 cut(s) 375, 628
SspMI CTAG 5 cut(s) 171, 1248, 1598, 1610, 1845
SstI GAGCTC 1 cut(s) 350
StyD4I CCNGG 4 cut(s) 242, 546, 840, 1647
StyI CCWWGG 2 cut(s) 557, 1425
TaaI ACNGT 8 cut(s) 117, 263, 275, 744, 771, 1035, 1107, 1319
TaiI ACGT 2 cut(s) 1014, 1220
TaqI TCGA 2 cut(s) 1068, 1732
TauI GCSGC 1 cut(s) 630
TfiI GAWTC 6 cut(s) 212, 574, 1391, 1664, 1711, 1972
Tru1I TTAA 7 cut(s) 588, 716, 915, 963, 1181, 1625, 2006
Tru9I TTAA 7 cut(s) 588, 716, 915, 963, 1181, 1625, 2006
TscAI CASTG 2 cut(s) 268, 296
TseI GCWGC 3 cut(s) 523, 706, 1703
TspRI CASTG 2 cut(s) 268, 296
Van91I CCANNNNNTGG 2 cut(s) 818, 872
VspI ATTAAT 1 cut(s) 1181
XagI CCTNNNNNAGG 1 cut(s) 1676
XapI RAATTY 4 cut(s) 404, 529, 712, 1137
XceI RCATGY 2 cut(s) 1046, 1242
XcmI CCANNNNNNNNNTGG 1 cut(s) 2075
XspI CTAG 5 cut(s) 171, 1248, 1598, 1610, 1845
ZraI GACGTC 1 cut(s) 1218
Zsp2I ATGCAT 3 cut(s) 1044, 1180, 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.