Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0001796

Physical Location & Seq

Genomic Coordinates Reverse (-)

6026493 .. 6028010

Gene Structure 1518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1341 bp

ATGCTAGTAACCACCTTTGCCTGGAAGAATCCCTACTCGCAACGGCTAAGACCGGTTACTCAGACCGGCTATCCCCGGTCACCTCTATCCCCTTCCTCGTATACTATATATACGCACCCACACCTATATGACCCTCTTCTCTCTCAGAACACGGTGAGGCTACGCCTCAACCACCGCCGGCGCCGCTTCCTCCCCCTCCTTGAACCCTCCAGCCTCCCTCAAGAATCTAATTTATCTTTAATATTTATTTTTAATTTGAAGATTTTGGATTCATTTTCTATGGCTTCCACAAAGAAAGTGGTGGATCGGATAAAGGGTCCATGGAGCCCCGAGGAGGACGAAGCGTTACAGAATCTGGTCAAGACCTACGGCCCGAGAAACTGGTCGCTGATCAGCAAGTCGATTCCCGGTAGATCCGGCAAGTCTTGCCGTCTGCGGTGGTGCAACCAACTCTCTCCGGAGGTGGAGCACCGCCCCTTCAGTCCTGAAGAGGACGACACCATAATCCGAGCCCACGCTCGGTTCGGAAACAAGTGGGCTACTATCGCCCGGCTGCTCAATGGCCGGACCGATAACGCCATAAAGAACCACTGGAACTCCACGCTCAAGCGCAAAAGCTCCTCCATGTCGGAAGATTTGAGCTCCGACGTCCAGGCCCACCCGCCACACAAACGATCCGCCAGCGTCGGCGCTGTTCCGGTTACGGGTCTCTATTTTAACCCCGGTAGCCCGTCCGGATCCGATTTGAGCGATTCGAGCTTGCCCGGCGGTGTGTCTCCGTCGTCTCAAGTTTTCACCCCCTTTGCGAGACCCATACCTCCTCCCATTGCTCTGCCGCCGATGGAGGCCGTGACATCAGCTGTAGCCGTTGATCCGCCCACCTCGCTCAGCCTCTCGCTTCCCGGATCCGAATCGTGTGATGGGTCGAGTCATATGGCGTCCGGATTCGGAACCAATCCGATTGTCCGCCCCGCCCAGATTGTACAGCAAGCGCCAGAGGTAACAGCTCCACCGCGGGCGGTTGGGTTGCCGCCACCGCCGCGTCAGAGCAACCAGAACGGCGAGATGGGGCACGATCAGCAGTTTTTCAGCTCGGAGTTCCTGGATGTGATGCAGGAGATGATCAGGAAGGAGGTGAGGAACTACATGGCGGGGATCGAGCAGAAGGGGCTGTGCATGCACACCGAAGCCATCCGAAACGCCGTCGTAAAGCTGAAAATAATTTTGGTAGTGTACAAAGGGACGAAGTGCGAATGTTTGATTAATGGAGGGCGGAAATGGGTAGATGGAAATTTCAAATTTTACCAATCTCAAGAACTAATTTGTTTTAAAATATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

447

Amino Acids

49.6

Weight (kDa)

9.48

Isoelectric Point (pI)

60.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	105 - 151	1.1e-18	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	108 - 166	7.5e-18	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	158 - 201	5.5e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	160 - 206	5.6e-10	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001796)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G23290 AT4G37260 AT5G67300
fragaria_vesca	FvH4_1g16770 FvH4_2g05210 FvH4_2g33810 FvH4_2g33810
malus_domestica	MD02G1179000.v1.1 MD05G1089600.v1.1 MD08G1092000.v1.1 MD15G1076600.v1.1 MD15G1288600.v1.1
prunus_persica	Prupe.1G430000_v2.0.a1 Prupe.6G229000_v2.0.a1 Prupe.8G134900_v2.0.a1
pyrus_communis	pycom02g14500 pycom05g08850 pycom08g07470 pycom15g07140
rosa_chinensis	RchiOBHm_Chr2g0106671 RchiOBHm_Chr6g0255341 RchiOBHm_Chr6g0308731
rosa_laevigata	RLG00000010626 RLG00000014846 RLG00000017529
rosa_multiflora	Rmu_co8261837.1_g000001 Rmu_sc0000871.1_g000019 Rmu_sc0000903.1_g000030 Rmu_sc0004000.1_g000004 Rmu_sc0011027.1_g000001
rosa_roxburghii	Rroxscaffold_2G00136900 Rroxscaffold_7G00159990 Rroxscaffold_7G00210080
rosa_rugosa	Rorug02G0137600 Rorug05G0557500 Rorug06G0367900
rosa_samantha	Rh2BG199800 Rh6AG075800 Rh6AG478900 Rh6BG067700 Rh6BG488500 Rh6CG067400 Rh6CG493800 Rh6DG479400 Rh7BG300900
rosa_wichuraiana	Rw2G014830 Rw6G041730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	651
AccB1I	GGYRCC	1 cut(s)	180
AccI	GTMKAC	1 cut(s)	101
AccII	CGCG	2 cut(s)	1015, 1042
AccIII	TCCGGA	3 cut(s)	457, 734, 941
AclWI	GGATC	9 cut(s)	312, 408, 669, 732, 745, 866, 900, 913, 1163
AcoI	YGGCCR	1 cut(s)	562
AcsI	RAATTY	2 cut(s)	1291, 1298
AcuI	CTGAAG	2 cut(s)	463, 507
AcyI	GRCGYC	3 cut(s)	181, 648, 938
AfaI	GTAC	2 cut(s)	984, 1235
AfiI	CCNNNNNNNGG	4 cut(s)	21, 334, 519, 704
AgeI	ACCGGT	1 cut(s)	52
AgsI	TTSAA	3 cut(s)	203, 259, 1297
AjnI	CCWGG	3 cut(s)	20, 651, 1101
AjuI	GAANNNNNNNTTGG	2 cut(s)	1208, 1240
AluBI	AGCT	7 cut(s)	618, 642, 759, 860, 1007, 1092, 1213
AluI	AGCT	7 cut(s)	618, 642, 759, 860, 1007, 1092, 1213
Alw21I	GWGCWC	2 cut(s)	471, 644
Alw26I	GTCTC	4 cut(s)	713, 780, 789, 802
AlwI	GGATC	9 cut(s)	312, 408, 669, 732, 745, 866, 900, 913, 1163
AlwNI	CAGNNNCTG	1 cut(s)	355
Ama87I	CYCGRG	2 cut(s)	329, 373
Aor13HI	TCCGGA	3 cut(s)	457, 734, 941
AoxI	GGCC	4 cut(s)	370, 562, 654, 846
ApeKI	GCWGC	1 cut(s)	553
ApoI	RAATTY	2 cut(s)	1291, 1298
AseI	ATTAAT	1 cut(s)	1263
AsiGI	ACCGGT	1 cut(s)	52
AspLEI	GCGC	4 cut(s)	183, 612, 692, 994
AspS9I	GGNCC	4 cut(s)	317, 371, 567, 655
AsuC2I	CCSGG	6 cut(s)	76, 408, 550, 723, 765, 903
AsuHPI	GGTGA	4 cut(s)	72, 166, 787, 1147
AvaI	CYCGRG	2 cut(s)	329, 373
AvaII	GGWCC	2 cut(s)	317, 567
BaeGI	GKGCMC	1 cut(s)	1074
BamHI	GGATCC	2 cut(s)	737, 905
BanI	GGYRCC	1 cut(s)	180
BanII	GRGCYC	3 cut(s)	329, 514, 644
BarI	GAAGNNNNNNTAC	2 cut(s)	17, 49
Bbv12I	GWGCWC	2 cut(s)	471, 644
BbvI	GCAGC	1 cut(s)	540
BccI	CCATC	5 cut(s)	835, 914, 1060, 1199, 1280
BceAI	ACGGC	7 cut(s)	59, 385, 414, 833, 851, 1075, 1187
BciT130I	CCWGG	3 cut(s)	22, 653, 1103
BclI	TGATCA	2 cut(s)	390, 1122
BcnI	CCSGG	6 cut(s)	76, 408, 550, 723, 765, 903
BcoDI	GTCTC	4 cut(s)	713, 780, 789, 802
BfaI	CTAG	1 cut(s)	5
BfmI	CTRYAG	1 cut(s)	861
BfoI	RGCGCY	3 cut(s)	184, 693, 995
BisI	GCNGC	5 cut(s)	184, 554, 836, 1031, 1040
BlpI	GCTNAGC	1 cut(s)	887
BlsI	GCNGC	5 cut(s)	185, 555, 837, 1032, 1041
Bme1390I	CCNGG	9 cut(s)	22, 76, 408, 550, 653, 723, 765, 903, 1103
Bme18I	GGWCC	2 cut(s)	317, 567
BmeT110I	CYCGRG	2 cut(s)	329, 373
BmgT120I	GGNCC	4 cut(s)	317, 371, 567, 655
BmiI	GGNNCC	6 cut(s)	182, 318, 326, 739, 907, 952
BmrFI	CCNGG	9 cut(s)	22, 76, 408, 550, 653, 723, 765, 903, 1103
BmsI	GCATC	1 cut(s)	1101
BpmI	CTGGAG	1 cut(s)	193
Bpu1102I	GCTNAGC	1 cut(s)	887
BpuEI	CTTGAG	4 cut(s)	204, 590, 771, 1296
BpuMI	CCSGG	6 cut(s)	76, 408, 550, 723, 765, 903
BsaBI	GATNNNNATC	1 cut(s)	910
BsaHI	GRCGYC	3 cut(s)	181, 648, 938
BsaI	GGTCTC	2 cut(s)	713, 802
BsaJI	CCNNGG	5 cut(s)	74, 320, 330, 721, 1013
BsaWI	WCCGGW	5 cut(s)	52, 457, 697, 734, 941
BsaXI	ACNNNNNCTCC	2 cut(s)	581, 611
Bsc4I	CCNNNNNNNGG	4 cut(s)	21, 334, 519, 704
Bse118I	RCCGGY	3 cut(s)	52, 65, 177
Bse1I	ACTGG	2 cut(s)	386, 596
Bse3DI	GCAATG	1 cut(s)	825
Bse8I	GATNNNNATC	1 cut(s)	910
BseAI	TCCGGA	3 cut(s)	457, 734, 941
BseBI	CCWGG	3 cut(s)	22, 653, 1103
BseDI	CCNNGG	5 cut(s)	74, 320, 330, 721, 1013
BseGI	GGATG	2 cut(s)	1111, 1191
BseJI	GATNNNNATC	1 cut(s)	910
BseLI	CCNNNNNNNGG	4 cut(s)	21, 334, 519, 704
BseMI	GCAATG	1 cut(s)	825
BseMII	CTCAG	3 cut(s)	74, 158, 901
BseNI	ACTGG	2 cut(s)	386, 596
BseRI	GAGGAG	3 cut(s)	347, 610, 810
BseSI	GKGCMC	1 cut(s)	1074
BseXI	GCAGC	1 cut(s)	540
Bsh1236I	CGCG	2 cut(s)	1015, 1042
BshFI	GGCC	4 cut(s)	372, 564, 656, 848
BshNI	GGYRCC	1 cut(s)	180
BshTI	ACCGGT	1 cut(s)	52
BsiHKAI	GWGCWC	2 cut(s)	471, 644
BsiHKCI	CYCGRG	2 cut(s)	329, 373
BslFI	GGGAC	1 cut(s)	1255
BslI	CCNNNNNNNGG	4 cut(s)	21, 334, 519, 704
BsmAI	GTCTC	4 cut(s)	713, 780, 789, 802
BsmBI	CGTCTC	1 cut(s)	789
BsmFI	GGGAC	1 cut(s)	1255
BsnI	GGCC	4 cut(s)	372, 564, 656, 848
Bso31I	GGTCTC	2 cut(s)	713, 802
BsoBI	CYCGRG	2 cut(s)	329, 373
Bsp1286I	GDGCHC	5 cut(s)	329, 471, 514, 644, 1074
Bsp13I	TCCGGA	3 cut(s)	457, 734, 941
Bsp1407I	TGTACA	2 cut(s)	982, 1233
Bsp1720I	GCTNAGC	1 cut(s)	887
Bsp19I	CCATGG	1 cut(s)	320
BspANI	GGCC	4 cut(s)	372, 564, 656, 848
BspCNI	CTCAG	3 cut(s)	73, 157, 900
BspEI	TCCGGA	3 cut(s)	457, 734, 941
BspFNI	CGCG	2 cut(s)	1015, 1042
BspLI	GGNNCC	6 cut(s)	182, 318, 326, 739, 907, 952
BspPI	GGATC	9 cut(s)	312, 408, 669, 732, 745, 866, 900, 913, 1163
BspT107I	GGYRCC	1 cut(s)	180
BspTNI	GGTCTC	2 cut(s)	713, 802
BsrDI	GCAATG	1 cut(s)	825
BsrFI	RCCGGY	3 cut(s)	52, 65, 177
BsrGI	TGTACA	2 cut(s)	982, 1233
BsrI	ACTGG	2 cut(s)	386, 596
BssAI	RCCGGY	3 cut(s)	52, 65, 177
BssECI	CCNNGG	5 cut(s)	74, 320, 330, 721, 1013
BssNAI	GTATAC	1 cut(s)	102
BssNI	GRCGYC	3 cut(s)	181, 648, 938
BssT1I	CCWWGG	1 cut(s)	320
Bst1107I	GTATAC	1 cut(s)	102
Bst2UI	CCWGG	3 cut(s)	22, 653, 1103
Bst4CI	ACNGT	1 cut(s)	154
Bst6I	CTCTTC	2 cut(s)	141, 483
BstACI	GRCGYC	3 cut(s)	181, 648, 938
BstAPI	GCANNNNNTGC	1 cut(s)	426
BstAUI	TGTACA	2 cut(s)	982, 1233
BstC8I	GCNNGC	6 cut(s)	179, 682, 761, 990, 1017, 1178
BstDEI	CTNAG	4 cut(s)	47, 60, 144, 887
BstDSI	CCRYGG	2 cut(s)	320, 1013
BstEII	GGTNACC	1 cut(s)	78
BstF5I	GGATG	2 cut(s)	1111, 1191
BstFNI	CGCG	2 cut(s)	1015, 1042
BstH2I	RGCGCY	3 cut(s)	184, 693, 995
BstHHI	GCGC	4 cut(s)	183, 612, 692, 994
BstMAI	GTCTC	4 cut(s)	713, 780, 789, 802
BstNI	CCWGG	3 cut(s)	22, 653, 1103
BstNSI	RCATGY	1 cut(s)	1180
BstPI	GGTNACC	1 cut(s)	78
BstSCI	CCNGG	9 cut(s)	20, 74, 406, 548, 651, 721, 763, 901, 1101
BstSFI	CTRYAG	1 cut(s)	861
BstSLI	GKGCMC	1 cut(s)	1074
BstUI	CGCG	2 cut(s)	1015, 1042
BstV1I	GCAGC	1 cut(s)	540
BstX2I	RGATCY	3 cut(s)	413, 737, 905
BstYI	RGATCY	3 cut(s)	413, 737, 905
BstZ17I	GTATAC	1 cut(s)	102
BsuRI	GGCC	4 cut(s)	372, 564, 656, 848
BtgI	CCRYGG	2 cut(s)	320, 1013
BtsCI	GGATG	2 cut(s)	1111, 1191
BtsIMutI	CAGTG	1 cut(s)	589
Cac8I	GCNNGC	6 cut(s)	179, 682, 761, 990, 1017, 1178
CaiI	CAGNNNCTG	1 cut(s)	355
CfoI	GCGC	4 cut(s)	183, 612, 692, 994
Cfr10I	RCCGGY	3 cut(s)	52, 65, 177
Cfr13I	GGNCC	4 cut(s)	317, 371, 567, 655
Cfr42I	CCGCGG	1 cut(s)	1016
CpoI	CGGWCCG	1 cut(s)	567
CseI	GACGC	3 cut(s)	673, 927, 1031
Csp6I	GTAC	2 cut(s)	983, 1234
CspAI	ACCGGT	1 cut(s)	52
CspCI	CAANNNNNGTGG	2 cut(s)	279, 314
CspI	CGGWCCG	1 cut(s)	567
CviAII	CATG	4 cut(s)	321, 625, 1147, 1177
CviQI	GTAC	2 cut(s)	983, 1234
DdeI	CTNAG	4 cut(s)	47, 60, 144, 887
DinI	GGCGCC	1 cut(s)	182
DraI	TTTAAA	1 cut(s)	1330
EaeI	YGGCCR	1 cut(s)	562
Eam1104I	CTCTTC	2 cut(s)	141, 483
EarI	CTCTTC	2 cut(s)	141, 483
EciI	GGCGGA	4 cut(s)	667, 864, 956, 1288
Ecl136II	GAGCTC	1 cut(s)	642
Eco130I	CCWWGG	1 cut(s)	320
Eco24I	GRGCYC	3 cut(s)	329, 514, 644
Eco31I	GGTCTC	2 cut(s)	713, 802
Eco47I	GGWCC	2 cut(s)	317, 567
Eco53kI	GAGCTC	1 cut(s)	642
Eco57I	CTGAAG	2 cut(s)	463, 507
Eco88I	CYCGRG	2 cut(s)	329, 373
Eco91I	GGTNACC	1 cut(s)	78
EcoICRI	GAGCTC	1 cut(s)	642
EcoO65I	GGTNACC	1 cut(s)	78
EcoRII	CCWGG	3 cut(s)	20, 651, 1101
EcoT14I	CCWWGG	1 cut(s)	320
EcoT38I	GRGCYC	3 cut(s)	329, 514, 644
EgeI	GGCGCC	1 cut(s)	182
EheI	GGCGCC	1 cut(s)	182
ErhI	CCWWGG	1 cut(s)	320
Esp3I	CGTCTC	1 cut(s)	789
FaeI	CATG	4 cut(s)	324, 628, 1150, 1180
FaqI	GGGAC	1 cut(s)	1255
FatI	CATG	4 cut(s)	320, 624, 1146, 1176
FauI	CCCGC	4 cut(s)	669, 979, 1008, 1144
FauNDI	CATATG	1 cut(s)	933
FbaI	TGATCA	2 cut(s)	390, 1122
FblI	GTMKAC	1 cut(s)	101
Fnu4HI	GCNGC	5 cut(s)	184, 554, 836, 1031, 1040
FokI	GGATG	2 cut(s)	1118, 1178
FriOI	GRGCYC	3 cut(s)	329, 514, 644
Fsp4HI	GCNGC	5 cut(s)	184, 554, 836, 1031, 1040
FspBI	CTAG	1 cut(s)	5
GlaI	GCGC	4 cut(s)	182, 611, 691, 993
GluI	GCNGC	5 cut(s)	184, 554, 836, 1031, 1040
GsuI	CTGGAG	1 cut(s)	193
HaeII	RGCGCY	3 cut(s)	184, 693, 995
HaeIII	GGCC	4 cut(s)	372, 564, 656, 848
HgaI	GACGC	3 cut(s)	673, 927, 1031
HhaI	GCGC	4 cut(s)	183, 612, 692, 994
Hin1I	GRCGYC	3 cut(s)	181, 648, 938
Hin1II	CATG	4 cut(s)	324, 628, 1150, 1180
Hin6I	GCGC	4 cut(s)	181, 610, 690, 992
HinP1I	GCGC	4 cut(s)	181, 610, 690, 992
HinfI	GANTC	9 cut(s)	28, 224, 269, 352, 403, 752, 911, 928, 945
HphI	GGTGA	4 cut(s)	72, 166, 787, 1147
Hpy166II	GTNNAC	2 cut(s)	102, 1234
Hpy188III	TCNNGA	8 cut(s)	221, 361, 458, 485, 735, 942, 1126, 1313
Hpy8I	GTNNAC	2 cut(s)	102, 1234
Hpy99I	CGWCG	4 cut(s)	650, 689, 784, 1208
HpyAV	CCTTC	4 cut(s)	102, 487, 1123, 1159
HpyCH4III	ACNGT	1 cut(s)	154
HpyCH4IV	ACGT	1 cut(s)	648
HpyCH4V	TGCA	4 cut(s)	444, 1114, 1176, 1180
HpyF3I	CTNAG	4 cut(s)	47, 60, 144, 887
HpySE526I	ACGT	1 cut(s)	648
Hsp92I	GRCGYC	3 cut(s)	181, 648, 938
Hsp92II	CATG	4 cut(s)	324, 628, 1150, 1180
HspAI	GCGC	4 cut(s)	181, 610, 690, 992
KasI	GGCGCC	1 cut(s)	180
Kpn2I	TCCGGA	3 cut(s)	457, 734, 941
KroI	GCCGGC	1 cut(s)	177
KroNI	GCCGGC	1 cut(s)	179
Ksp22I	TGATCA	2 cut(s)	390, 1122
KspI	CCGCGG	1 cut(s)	1016
LmnI	GCTCC	5 cut(s)	324, 466, 623, 647, 1012
Lsp1109I	GCAGC	1 cut(s)	540
LweI	GCATC	1 cut(s)	1101
MaeI	CTAG	1 cut(s)	5
MaeII	ACGT	1 cut(s)	648
MaeIII	GTNAC	7 cut(s)	7, 55, 78, 345, 700, 850, 1000
MboII	GAAGA	5 cut(s)	37, 128, 271, 500, 644
MflI	RGATCY	3 cut(s)	413, 737, 905
MhlI	GDGCHC	5 cut(s)	329, 471, 514, 644, 1074
MluCI	AATT	6 cut(s)	229, 253, 1221, 1291, 1298, 1320
Mly113I	GGCGCC	1 cut(s)	181
MlyI	GAGTC	1 cut(s)	937
MmeI	TCCRAC	2 cut(s)	609, 669
MreI	CGCCGGCG	1 cut(s)	177
MroI	TCCGGA	3 cut(s)	457, 734, 941
MroNI	GCCGGC	1 cut(s)	177
MseI	TTAA	6 cut(s)	239, 252, 717, 1263, 1329, 1339
MslI	CAYNNNNRTG	1 cut(s)	126
MspA1I	CMGCKG	2 cut(s)	860, 1015
MspR9I	CCNGG	9 cut(s)	22, 76, 408, 550, 653, 723, 765, 903, 1103
MvaI	CCWGG	3 cut(s)	22, 653, 1103
MvnI	CGCG	2 cut(s)	1015, 1042
NaeI	GCCGGC	1 cut(s)	179
NarI	GGCGCC	1 cut(s)	181
NciI	CCSGG	6 cut(s)	76, 408, 550, 723, 765, 903
NcoI	CCATGG	1 cut(s)	320
NdeI	CATATG	1 cut(s)	933
NgoMIV	GCCGGC	1 cut(s)	177
NlaIII	CATG	4 cut(s)	324, 628, 1150, 1180
NlaIV	GGNNCC	6 cut(s)	182, 318, 326, 739, 907, 952
NmuCI	GTSAC	2 cut(s)	78, 850
NspI	RCATGY	1 cut(s)	1180
PaeI	GCATGC	1 cut(s)	1180
PdiI	GCCGGC	1 cut(s)	179
PfeI	GAWTC	8 cut(s)	28, 224, 269, 352, 403, 752, 911, 945
PfoI	TCCNGGA	2 cut(s)	901, 1101
PinAI	ACCGGT	1 cut(s)	52
PkrI	GCNGC	5 cut(s)	185, 555, 837, 1032, 1041
PleI	GAGTC	1 cut(s)	936
PluTI	GGCGCC	1 cut(s)	184
PpsI	GAGTC	1 cut(s)	936
PshBI	ATTAAT	1 cut(s)	1263
Psp124BI	GAGCTC	1 cut(s)	644
Psp6I	CCWGG	3 cut(s)	20, 651, 1101
PspEI	GGTNACC	1 cut(s)	78
PspGI	CCWGG	3 cut(s)	20, 651, 1101
PspN4I	GGNNCC	6 cut(s)	182, 318, 326, 739, 907, 952
PspPI	GGNCC	4 cut(s)	317, 371, 567, 655
PstNI	CAGNNNCTG	1 cut(s)	355
PsuI	RGATCY	3 cut(s)	413, 737, 905
PvuII	CAGCTG	1 cut(s)	860
RsaI	GTAC	2 cut(s)	984, 1235
RsaNI	GTAC	2 cut(s)	983, 1234
RseI	CAYNNNNRTG	1 cut(s)	126
Rsr2I	CGGWCCG	1 cut(s)	567
RsrII	CGGWCCG	1 cut(s)	567
SacI	GAGCTC	1 cut(s)	644
SacII	CCGCGG	1 cut(s)	1016
SaqAI	TTAA	6 cut(s)	239, 252, 717, 1263, 1329, 1339
SatI	GCNGC	5 cut(s)	184, 554, 836, 1031, 1040
Sau96I	GGNCC	4 cut(s)	317, 371, 567, 655
SchI	GAGTC	1 cut(s)	937
ScrFI	CCNGG	9 cut(s)	22, 76, 408, 550, 653, 723, 765, 903, 1103
SduI	GDGCHC	5 cut(s)	329, 471, 514, 644, 1074
SfaNI	GCATC	1 cut(s)	1101
SfcI	CTRYAG	1 cut(s)	861
SfoI	GGCGCC	1 cut(s)	182
Sfr303I	CCGCGG	1 cut(s)	1016
SgrAI	CRCCGGYG	1 cut(s)	177
SgrBI	CCGCGG	1 cut(s)	1016
SinI	GGWCC	2 cut(s)	317, 567
SmiMI	CAYNNNNRTG	1 cut(s)	126
SmlI	CTYRAG	4 cut(s)	219, 605, 786, 1311
SmoI	CTYRAG	4 cut(s)	219, 605, 786, 1311
SphI	GCATGC	1 cut(s)	1180
Sse9I	AATT	6 cut(s)	229, 253, 1221, 1291, 1298, 1320
SspDI	GGCGCC	1 cut(s)	180
SspI	AATATT	1 cut(s)	243
SspMI	CTAG	1 cut(s)	5
SstI	GAGCTC	1 cut(s)	644
StyD4I	CCNGG	9 cut(s)	20, 74, 406, 548, 651, 721, 763, 901, 1101
StyI	CCWWGG	1 cut(s)	320
TaaI	ACNGT	1 cut(s)	154
TaiI	ACGT	1 cut(s)	651
TaqI	TCGA	4 cut(s)	401, 755, 926, 1158
TaqII	GACCGA	1 cut(s)	584
TasI	AATT	6 cut(s)	229, 253, 1221, 1291, 1298, 1320
TatI	WGTACW	2 cut(s)	982, 1233
TauI	GCSGC	4 cut(s)	186, 838, 1033, 1042
TfiI	GAWTC	8 cut(s)	28, 224, 269, 352, 403, 752, 911, 945
Tru1I	TTAA	6 cut(s)	239, 252, 717, 1263, 1329, 1339
Tru9I	TTAA	6 cut(s)	239, 252, 717, 1263, 1329, 1339
TscAI	CASTG	1 cut(s)	596
TseFI	GTSAC	2 cut(s)	78, 850
TseI	GCWGC	1 cut(s)	553
Tsp45I	GTSAC	2 cut(s)	78, 850
TspDTI	ATGAA	1 cut(s)	261
TspGWI	ACGGA	1 cut(s)	768
TspRI	CASTG	1 cut(s)	596
VpaK11BI	GGWCC	2 cut(s)	317, 567
VspI	ATTAAT	1 cut(s)	1263
XapI	RAATTY	2 cut(s)	1291, 1298
XceI	RCATGY	1 cut(s)	1180
XcmI	CCANNNNNNNNNTGG	1 cut(s)	295
XmiI	GTMKAC	1 cut(s)	101
XspI	CTAG	1 cut(s)	5
ZraI	GACGTC	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.