Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0002321

Physical Location & Seq

Genomic Coordinates Forward (+)

23691748 .. 23700016

Gene Structure 8269 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g20940.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGTTTTGGCGTATGGCGGGGTTGTCCACGGCGTCTGCGGTGGAGACAATTTTGGACAAGGATCATTTCACGTTGGAAGCGCTACTTGATGAAGATGAAATTATTCAAGAATGCAAAGCTCTTAATGGCCGCCTAATCAATTTTTTGCGAGAAAGAGCCCAGGTTGAGCAACTCATCCGATACATTGTTGAAGAAGCTCCCGAGGATGCTGAAAATGGACGAACTTTCAAATTTCCTTTTATTGCATGTGAGATTTTTACTTGTGAAGTTGATATCATACTCAAAACATTGGTAGAGGATGAGGAGTTGATGAACTTGTTGTTCTCCTTTTTGGAACCAAATAATTCTCACAGCACACTCTTGGCTGGGTACTTTAGCAAGGTTGTTGTTTGTCTGCTGTTGCGCAAGGCAGTTCCTTTCCTGCATTATATTCAGGGTCATCAAGATATTGTCAAGAAGCTAGTTGACCTGATTGGAATTACATCCATTATGGAGGTTTTGATACGTCTGGTTGGTGCTGATGAACACATGTATTCTAACTATACGGATGCAATGCACTGGATACAAGATACAGATGTGCTAGAGATGATTGTGGACAAGTTCAGCTCTTCGGATTCTCCTGAAGTGCATGCTAATGCAGCGGAGACACTTTGTGCTATAACACGGTTTGCTCCGCCTGGACTTTCTTCTAAAATCTCAAGCCCAAGCTTTATAGGAAGATTGTTTCGGCATGCTTTGGAGGATTCACGGCCAAAATCTGTTCTTGTTAACTCATTGTCGGTATGCATCTCTTTGTTAGACCCTAGGAGGCTAACCTTGGGAACGTATCATATGTATGGACGTCAGATGACTCATGGATCCACAGTTACCGCTAATCCTGAGACTGTTGTGGGCATGCTGGAGAGCCTAGGTGATTTGCTGAAGCTGTTGGATGTTTCGTCGGTGGATAATACGCTGTTAACTACATATGGCAAGTTACAGCCGCCTCTTGGAAAACATCGATTAAAGGTTGTGGAGTTCATTTCAGTATTACTTACGGTTGGTAGTGAAGCTGCTGAGAAGGAATTGATTCGTCTTGGAGCTGTACAAATAATTTTAGACTTGTTTTTTAAGTACCCATATAACAACTTTGTACATCACCACATAGAGAACATAATTGTGTCGTGTTTGGAAAGCAAGAATGTTCCTCTTGTTGAACATCTTCTTCGTGAGTGTGACCTTGTTGGAAAAGTACTTCAAGCAGAAAAGAATTTTACATTGGTAGCTGACTCGGACAAGCCAACTGTTCCTGCAGAGGGTAGATCCCCACCCAGAATTGGGAGCATTGGACATTTAACACGTATATCCAACAAACTCATTCAGCTAGGAAATAACAATAGCGAGATTCAGACGCTTCTGCAGGAAAACAGTGAGTGGGCTGAGTGGCAGGCAAGTGTCCTGTCAAAACGTAACGCAGTCGAGAACGTCTATCAATGGGCCTGTGGGCGGCCAACTGCATTACATGATCGAAATAGGGATAGTGATGATGATGACTATCAAGATAGAGATTACGATGTTGCAGCCCTTGCAAATAACTTAAGCCAGGCTTTCCGATATGGAATTAACAACAATGATGTGTTAGATGAGGGCCATGGCTCACTTGAACGAGATGATGAGGAAGTTTACTTTGATGATGAATCTGCTGAAGTCATCATATCTTCATTGCGTTTGGGAGATGACCAGGAAAGTGGTTCTCTGTTTACAAATTCCAACTGGTTTGCTTTCGAGGATGACAGGGCTGCCACTGATCACTCAACTGGCTCTCTTGCTTCTCCGTCACCTATTACGGCGGAGTCTAATGTTGTCAATGGTGGCGGGGAAGATGATGTCATTGTTGGTGAAGATGATGACTTAGTTGACACCGCAACATCTTCTCCGGAACCAGGAATAAAACCAGAAGATTCGGAAGTTGCCATCCCAAACAATTCGTTAGAATTGGGGCCCGTTGAAACTGAAAAACCACCTGAGTGGGTTGAATGGAGGGAGACTTCAGACTCTGGGGAACCCTCTGATGCCCTATCAAATGGTGAGCTTCAAACGAAATCTGCGGATGCAGCTAAATGTTCGTCATCTTCTGAGCCATTGATGAAAGATGATAAAGTTGTTACCGAGCCTCAAGCTGAATCAACAGTTGAGGGAACTTCCAAGCCGGCTGAGCTGTCAGAAACAGGCAATGAGAAGACAAGTTCTGAGTCAACCACTTCTGATGCTGCAGCTGCCGACGTGGGAACAAAAGGCAGTCAAGAAGCAGCTCCGGGTGATAAAGAGAAAGATAAGGAAGGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SAPS

Protein Analysis

776

Amino Acids

85.4

Weight (kDa)

4.52

Isoelectric Point (pI)

37.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30470 AT1G30470 AT1G30470 AT2G28360 AT3G45190 AT3G45190
fragaria_vesca	FvH4_3g10000 FvH4_3g10000
malus_domestica	MD05G1274100.v1.1 MD10G1253800.v1.1
prunus_persica	Prupe.4G089700_v2.0.a1
pyrus_communis	pycom05g25550 pycom09g07810 pycom09g07840 pycom10g20940
rosa_chinensis	RchiOBHm_Chr5g0015881 RchiOBHm_Chr5g0049281 RchiOBHm_Chr5g0049291
rosa_laevigata	RLG00000034610
rosa_multiflora	Rmu_sc0000012.1_g000009 Rmu_sc0009674.1_g000007 Rmu_sc0012428.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032370 Rroxscaffold_1G00032380 Rroxscaffold_1G00060720
rosa_rugosa	Rorug05G0029700 Rorug05G0029800 Rorug05G0247400 Rorug05G0247500 Rorug05G0247600
rosa_samantha	Rh5AG123400 Rh5AG324000 Rh5BG122300 Rh5BG334900 Rh5BG335000 Rh5CG133500 Rh5CG360000 Rh5DG121700 Rh5DG347000 Rh5DG347100
rosa_wichuraiana	Rw5G010650 Rw5G030630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	844
Acc16I	TGCGCA	1 cut(s)	404
AccIII	TCCGGA	1 cut(s)	1915
AclWI	GGATC	4 cut(s)	69, 852, 865, 1296
AcoI	YGGCCR	3 cut(s)	127, 749, 1487
AcsI	RAATTY	3 cut(s)	230, 1249, 1744
AcuI	CTGAAG	4 cut(s)	642, 941, 1704, 2013
AcyI	GRCGYC	2 cut(s)	32, 841
AdeI	CACNNNGTG	1 cut(s)	653
AfaI	GTAC	5 cut(s)	371, 1086, 1115, 1134, 1233
AfeI	AGCGCT	1 cut(s)	81
AfiI	CCNNNNNNNGG	6 cut(s)	989, 1295, 1316, 1317, 1485, 1922
AflII	CTTAAG	1 cut(s)	1576
AflIII	ACRYGT	2 cut(s)	528, 1337
AgsI	TTSAA	9 cut(s)	107, 191, 229, 1196, 1238, 1643, 1988, 2015, 2075
AjiI	CACGTC	1 cut(s)	2263
AjnI	CCWGG	5 cut(s)	159, 676, 1581, 1719, 1921
AjuI	GAANNNNNNNTTGG	2 cut(s)	1241, 1273
AleI	CACNNNNGTG	1 cut(s)	2005
Alw26I	GTCTC	4 cut(s)	38, 638, 875, 2018
AlwI	GGATC	4 cut(s)	69, 852, 865, 1296
AlwNI	CAGNNNCTG	1 cut(s)	2036
Ama87I	CYCGRG	1 cut(s)	200
Aor13HI	TCCGGA	1 cut(s)	1915
Aor51HI	AGCGCT	1 cut(s)	81
AoxI	GGCC	6 cut(s)	127, 749, 1476, 1487, 1627, 1979
ApaI	GGGCCC	1 cut(s)	1983
ApeKI	GCWGC	9 cut(s)	638, 1052, 1559, 1778, 2093, 2249, 2252, 2255, 2288
ApoI	RAATTY	3 cut(s)	230, 1249, 1744
Asp700I	GAANNNNTTC	3 cut(s)	102, 1068, 1200
AspA2I	CCTAGG	2 cut(s)	803, 907
AspLEI	GCGC	2 cut(s)	82, 405
AspS9I	GGNCC	4 cut(s)	1476, 1627, 1979, 1980
AsuC2I	CCSGG	1 cut(s)	2295
AsuHPI	GGTGA	6 cut(s)	923, 1130, 1809, 1889, 2078, 2309
AvaI	CYCGRG	1 cut(s)	200
AvrII	CCTAGG	2 cut(s)	803, 907
BaeGI	GKGCMC	1 cut(s)	1983
BaeI	ACNNNNGTAYC	2 cut(s)	561, 594
BamHI	GGATCC	1 cut(s)	857
BanII	GRGCYC	2 cut(s)	160, 1983
BbsI	GAAGAC	1 cut(s)	2225
BbvI	GCAGC	9 cut(s)	650, 1039, 1571, 1765, 2105, 2236, 2242, 2264, 2300
BccI	CCATC	1 cut(s)	1961
BceAI	ACGGC	3 cut(s)	45, 764, 1842
BciT130I	CCWGG	5 cut(s)	161, 678, 1583, 1721, 1923
BciVI	GTATCC	1 cut(s)	555
BclI	TGATCA	1 cut(s)	1786
BcnI	CCSGG	1 cut(s)	2295
BcoDI	GTCTC	4 cut(s)	38, 638, 875, 2018
BfaI	CTAG	6 cut(s)	461, 581, 804, 908, 1364, 2326
BfmI	CTRYAG	3 cut(s)	1290, 1397, 2250
BfoI	RGCGCY	1 cut(s)	83
BfrI	CTTAAG	1 cut(s)	1576
BfuI	GTATCC	1 cut(s)	555
BlnI	CCTAGG	2 cut(s)	803, 907
BlpI	GCTNAGC	1 cut(s)	2193
BmcAI	AGTACT	1 cut(s)	1233
Bme1390I	CCNGG	6 cut(s)	161, 678, 1583, 1721, 1923, 2295
BmeT110I	CYCGRG	1 cut(s)	200
BmgBI	CACGTC	1 cut(s)	2263
BmgT120I	GGNCC	4 cut(s)	1476, 1627, 1979, 1980
BmiI	GGNNCC	6 cut(s)	336, 859, 1920, 1980, 1981, 2043
BmrFI	CCNGG	6 cut(s)	161, 678, 1583, 1721, 1923, 2295
BmsI	GCATC	6 cut(s)	196, 538, 795, 2041, 2080, 2236
BpiI	GAAGAC	1 cut(s)	2225
BpmI	CTGGAG	1 cut(s)	920
Bpu1102I	GCTNAGC	1 cut(s)	2193
BpuEI	CTTGAG	2 cut(s)	682, 2139
BpuMI	CCSGG	1 cut(s)	2295
Bsa29I	ATCGAT	1 cut(s)	1000
BsaAI	YACGTR	1 cut(s)	1340
BsaBI	GATNNNNATC	1 cut(s)	1533
BsaHI	GRCGYC	2 cut(s)	32, 841
BsaJI	CCNNGG	7 cut(s)	27, 159, 201, 803, 816, 907, 1630
BsaWI	WCCGGW	1 cut(s)	1915
BsaXI	ACNNNNNCTCC	2 cut(s)	1897, 1927
Bsc4I	CCNNNNNNNGG	6 cut(s)	989, 1295, 1316, 1317, 1485, 1922
Bse118I	RCCGGY	1 cut(s)	2188
Bse1I	ACTGG	3 cut(s)	563, 1757, 1801
Bse3DI	GCAATG	3 cut(s)	558, 1700, 2218
Bse8I	GATNNNNATC	1 cut(s)	1533
BseAI	TCCGGA	1 cut(s)	1915
BseBI	CCWGG	5 cut(s)	161, 678, 1583, 1721, 1923
BseCI	ATCGAT	1 cut(s)	1000
BseDI	CCNNGG	7 cut(s)	27, 159, 201, 803, 816, 907, 1630
BseGI	GGATG	9 cut(s)	174, 211, 304, 482, 553, 937, 1774, 1953, 2095
BseJI	GATNNNNATC	1 cut(s)	1533
BseLI	CCNNNNNNNGG	6 cut(s)	989, 1295, 1316, 1317, 1485, 1922
BseMI	GCAATG	3 cut(s)	558, 1700, 2218
BseMII	CTCAG	7 cut(s)	870, 1047, 1410, 1995, 2106, 2184, 2220
BseNI	ACTGG	3 cut(s)	563, 1757, 1801
BseRI	GAGGAG	1 cut(s)	317
BseSI	GKGCMC	1 cut(s)	1983
BseXI	GCAGC	9 cut(s)	650, 1039, 1571, 1765, 2105, 2236, 2242, 2264, 2300
BseYI	CCCAGC	1 cut(s)	365
BshFI	GGCC	6 cut(s)	129, 751, 1478, 1489, 1629, 1981
BshVI	ATCGAT	1 cut(s)	1000
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	3 cut(s)	1916, 2189, 2294
BslI	CCNNNNNNNGG	6 cut(s)	989, 1295, 1316, 1317, 1485, 1922
BsmAI	GTCTC	4 cut(s)	38, 638, 875, 2018
BsmI	GAATGC	1 cut(s)	116
BsnI	GGCC	6 cut(s)	129, 751, 1478, 1489, 1629, 1981
BsoBI	CYCGRG	1 cut(s)	200
Bsp120I	GGGCCC	1 cut(s)	1979
Bsp1286I	GDGCHC	2 cut(s)	160, 1983
Bsp13I	TCCGGA	1 cut(s)	1915
Bsp1407I	TGTACA	2 cut(s)	1084, 1132
Bsp143I	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
Bsp1720I	GCTNAGC	1 cut(s)	2193
Bsp19I	CCATGG	1 cut(s)	1630
BspANI	GGCC	6 cut(s)	129, 751, 1478, 1489, 1629, 1981
BspCNI	CTCAG	7 cut(s)	871, 1048, 1411, 1996, 2107, 2185, 2221
BspDI	ATCGAT	1 cut(s)	1000
BspEI	TCCGGA	1 cut(s)	1915
BspLI	GGNNCC	6 cut(s)	336, 859, 1920, 1980, 1981, 2043
BspMAI	CTGCAG	3 cut(s)	1294, 1401, 2254
BspPI	GGATC	4 cut(s)	69, 852, 865, 1296
BspQI	GCTCTTC	1 cut(s)	613
BspTI	CTTAAG	1 cut(s)	1576
BsrDI	GCAATG	3 cut(s)	558, 1700, 2218
BsrFI	RCCGGY	1 cut(s)	2188
BsrGI	TGTACA	2 cut(s)	1084, 1132
BsrI	ACTGG	3 cut(s)	563, 1757, 1801
BssAI	RCCGGY	1 cut(s)	2188
BssECI	CCNNGG	7 cut(s)	27, 159, 201, 803, 816, 907, 1630
BssMI	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
BssNI	GRCGYC	2 cut(s)	32, 841
BssT1I	CCWWGG	4 cut(s)	803, 816, 907, 1630
Bst2UI	CCWGG	5 cut(s)	161, 678, 1583, 1721, 1923
Bst4CI	ACNGT	7 cut(s)	666, 865, 886, 1039, 1285, 1409, 2170
Bst6I	CTCTTC	1 cut(s)	613
BstACI	GRCGYC	2 cut(s)	32, 841
BstAFI	CTTAAG	1 cut(s)	1576
BstAPI	GCANNNNNTGC	1 cut(s)	1565
BstAUI	TGTACA	2 cut(s)	1084, 1132
BstBAI	YACGTR	1 cut(s)	1340
BstC8I	GCNNGC	5 cut(s)	630, 732, 896, 1428, 2190
BstDEI	CTNAG	8 cut(s)	879, 1056, 1419, 1891, 2004, 2115, 2193, 2229
BstDSI	CCRYGG	2 cut(s)	27, 1630
BstF5I	GGATG	9 cut(s)	174, 211, 304, 482, 553, 937, 1774, 1953, 2095
BstH2I	RGCGCY	1 cut(s)	83
BstHHI	GCGC	2 cut(s)	82, 405
BstKTI	GATC	5 cut(s)	64, 860, 1304, 1507, 1789
BstMAI	GTCTC	4 cut(s)	38, 638, 875, 2018
BstMBI	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
BstMWI	GCNNNNNNNGC	5 cut(s)	638, 1565, 2093, 2194, 2255
BstNI	CCWGG	5 cut(s)	161, 678, 1583, 1721, 1923
BstNSI	RCATGY	5 cut(s)	249, 532, 632, 734, 898
BstSCI	CCNGG	6 cut(s)	159, 676, 1581, 1719, 1921, 2293
BstSFI	CTRYAG	3 cut(s)	1290, 1397, 2250
BstSLI	GKGCMC	1 cut(s)	1983
BstV1I	GCAGC	9 cut(s)	650, 1039, 1571, 1765, 2105, 2236, 2242, 2264, 2300
BstV2I	GAAGAC	1 cut(s)	2225
BstX2I	RGATCY	2 cut(s)	857, 1301
BstXI	CCANNNNNNTGG	2 cut(s)	1727, 2007
BstYI	RGATCY	2 cut(s)	857, 1301
Bsu15I	ATCGAT	1 cut(s)	1000
BsuI	GTATCC	1 cut(s)	555
BsuRI	GGCC	6 cut(s)	129, 751, 1478, 1489, 1629, 1981
BsuTUI	ATCGAT	1 cut(s)	1000
BtgI	CCRYGG	2 cut(s)	27, 1630
BtrI	CACGTC	1 cut(s)	2263
BtsCI	GGATG	9 cut(s)	174, 211, 304, 482, 553, 937, 1774, 1953, 2095
BtsIMutI	CAGTG	3 cut(s)	556, 1414, 1782
Cac8I	GCNNGC	5 cut(s)	630, 732, 896, 1428, 2190
CaiI	CAGNNNCTG	1 cut(s)	2036
CfoI	GCGC	2 cut(s)	82, 405
Cfr10I	RCCGGY	1 cut(s)	2188
Cfr13I	GGNCC	4 cut(s)	1476, 1627, 1979, 1980
ClaI	ATCGAT	1 cut(s)	1000
CseI	GACGC	2 cut(s)	21, 1399
Csp6I	GTAC	5 cut(s)	370, 1085, 1114, 1133, 1232
CviAII	CATG	8 cut(s)	246, 529, 629, 731, 854, 895, 1502, 1631
CviQI	GTAC	5 cut(s)	370, 1085, 1114, 1133, 1232
DdeI	CTNAG	8 cut(s)	879, 1056, 1419, 1891, 2004, 2115, 2193, 2229
DpnI	GATC	5 cut(s)	63, 859, 1303, 1506, 1788
DpnII	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
DraIII	CACNNNGTG	1 cut(s)	653
EaeI	YGGCCR	3 cut(s)	127, 749, 1487
Eam1104I	CTCTTC	1 cut(s)	613
EarI	CTCTTC	1 cut(s)	613
EciI	GGCGGA	2 cut(s)	663, 1844
Eco130I	CCWWGG	4 cut(s)	803, 816, 907, 1630
Eco24I	GRGCYC	2 cut(s)	160, 1983
Eco32I	GATATC	1 cut(s)	274
Eco47III	AGCGCT	1 cut(s)	81
Eco57I	CTGAAG	4 cut(s)	642, 941, 1704, 2013
Eco88I	CYCGRG	1 cut(s)	200
EcoO109I	RGGNCCY	1 cut(s)	1979
EcoRII	CCWGG	5 cut(s)	159, 676, 1581, 1719, 1921
EcoRV	GATATC	1 cut(s)	274
EcoT14I	CCWWGG	4 cut(s)	803, 816, 907, 1630
EcoT22I	ATGCAT	1 cut(s)	788
EcoT38I	GRGCYC	2 cut(s)	160, 1983
ErhI	CCWWGG	4 cut(s)	803, 816, 907, 1630
FaeI	CATG	8 cut(s)	249, 532, 632, 734, 857, 898, 1505, 1634
FalI	AAGNNNNNCTT	4 cut(s)	69, 101, 1570, 1602
FatI	CATG	8 cut(s)	245, 528, 628, 730, 853, 894, 1501, 1630
FauI	CCCGC	2 cut(s)	10, 1847
FauNDI	CATATG	2 cut(s)	831, 967
FbaI	TGATCA	1 cut(s)	1786
FokI	GGATG	9 cut(s)	161, 218, 311, 469, 560, 944, 1781, 1940, 2102
FriOI	GRGCYC	2 cut(s)	160, 1983
FspBI	CTAG	6 cut(s)	461, 581, 804, 908, 1364, 2326
FspI	TGCGCA	1 cut(s)	404
GlaI	GCGC	2 cut(s)	81, 404
GsaI	CCCAGC	1 cut(s)	369
GsuI	CTGGAG	1 cut(s)	920
HaeII	RGCGCY	1 cut(s)	83
HaeIII	GGCC	6 cut(s)	129, 751, 1478, 1489, 1629, 1981
HapII	CCGG	3 cut(s)	1916, 2189, 2294
HgaI	GACGC	2 cut(s)	21, 1399
HhaI	GCGC	2 cut(s)	82, 405
Hin1I	GRCGYC	2 cut(s)	32, 841
Hin1II	CATG	8 cut(s)	249, 532, 632, 734, 857, 898, 1505, 1634
Hin6I	GCGC	2 cut(s)	80, 403
HinP1I	GCGC	2 cut(s)	80, 403
HincII	GTYRAC	5 cut(s)	466, 769, 960, 1897, 2235
HindII	GTYRAC	5 cut(s)	466, 769, 960, 1897, 2235
HindIII	AAGCTT	1 cut(s)	706
HpaI	GTTAAC	2 cut(s)	769, 960
HpaII	CCGG	3 cut(s)	1916, 2189, 2294
HphI	GGTGA	6 cut(s)	923, 1130, 1809, 1889, 2078, 2309
Hpy166II	GTNNAC	9 cut(s)	27, 466, 595, 769, 960, 1663, 1740, 1897, 2235
Hpy8I	GTNNAC	9 cut(s)	27, 466, 595, 769, 960, 1663, 1740, 1897, 2235
Hpy99I	CGWCG	2 cut(s)	943, 2264
HpyAV	CCTTC	2 cut(s)	1054, 2312
HpyCH4III	ACNGT	7 cut(s)	666, 865, 886, 1039, 1285, 1409, 2170
HpyCH4IV	ACGT	8 cut(s)	71, 505, 824, 841, 1339, 1447, 1464, 2262
HpyF10VI	GCNNNNNNNGC	5 cut(s)	638, 1565, 2093, 2194, 2255
HpyF3I	CTNAG	8 cut(s)	879, 1056, 1419, 1891, 2004, 2115, 2193, 2229
HpySE526I	ACGT	8 cut(s)	71, 505, 824, 841, 1339, 1447, 1464, 2262
Hsp92I	GRCGYC	2 cut(s)	32, 841
Hsp92II	CATG	8 cut(s)	249, 532, 632, 734, 857, 898, 1505, 1634
HspAI	GCGC	2 cut(s)	80, 403
Kpn2I	TCCGGA	1 cut(s)	1915
KroI	GCCGGC	1 cut(s)	2188
KroNI	GCCGGC	1 cut(s)	2190
Ksp22I	TGATCA	1 cut(s)	1786
KspAI	GTTAAC	2 cut(s)	769, 960
Kzo9I	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
LguI	GCTCTTC	1 cut(s)	613
LmnI	GCTCC	5 cut(s)	202, 676, 1079, 1320, 2296
Lsp1109I	GCAGC	9 cut(s)	650, 1039, 1571, 1765, 2105, 2236, 2242, 2264, 2300
LweI	GCATC	6 cut(s)	196, 538, 795, 2041, 2080, 2236
MaeI	CTAG	6 cut(s)	461, 581, 804, 908, 1364, 2326
MaeII	ACGT	8 cut(s)	71, 505, 824, 841, 1339, 1447, 1464, 2262
MaeIII	GTNAC	6 cut(s)	865, 975, 1214, 1448, 1815, 2143
MalI	GATC	5 cut(s)	63, 859, 1303, 1506, 1788
MboI	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
MflI	RGATCY	2 cut(s)	857, 1301
MhlI	GDGCHC	2 cut(s)	160, 1983
MlyI	GAGTC	5 cut(s)	844, 1262, 1841, 2027, 2240
MmeI	TCCRAC	5 cut(s)	54, 909, 1204, 1371, 1773
Mph1103I	ATGCAT	1 cut(s)	788
MroI	TCCGGA	1 cut(s)	1915
MroNI	GCCGGC	1 cut(s)	2188
MroXI	GAANNNNTTC	3 cut(s)	102, 1068, 1200
MseI	TTAA	8 cut(s)	123, 768, 959, 1004, 1110, 1334, 1577, 1602
MslI	CAYNNNNRTG	4 cut(s)	633, 834, 1157, 2005
MspA1I	CMGCKG	2 cut(s)	641, 2255
MspCI	CTTAAG	1 cut(s)	1576
MspI	CCGG	3 cut(s)	1916, 2189, 2294
MspR9I	CCNGG	6 cut(s)	161, 678, 1583, 1721, 1923, 2295
Mva1269I	GAATGC	1 cut(s)	116
MvaI	CCWGG	5 cut(s)	161, 678, 1583, 1721, 1923
MwoI	GCNNNNNNNGC	5 cut(s)	638, 1565, 2093, 2194, 2255
NaeI	GCCGGC	1 cut(s)	2190
NciI	CCSGG	1 cut(s)	2295
NcoI	CCATGG	1 cut(s)	1630
NdeI	CATATG	2 cut(s)	831, 967
NdeII	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
NgoMIV	GCCGGC	1 cut(s)	2188
NlaIII	CATG	8 cut(s)	249, 532, 632, 734, 857, 898, 1505, 1634
NlaIV	GGNNCC	6 cut(s)	336, 859, 1920, 1980, 1981, 2043
NmuCI	GTSAC	2 cut(s)	1214, 1815
NsbI	TGCGCA	1 cut(s)	404
NsiI	ATGCAT	1 cut(s)	788
NspI	RCATGY	5 cut(s)	249, 532, 632, 734, 898
OliI	CACNNNNGTG	1 cut(s)	2005
PaeI	GCATGC	3 cut(s)	632, 734, 898
PciI	ACATGT	1 cut(s)	528
PciSI	GCTCTTC	1 cut(s)	613
PctI	GAATGC	1 cut(s)	116
PdiI	GCCGGC	1 cut(s)	2190
PdmI	GAANNNNTTC	3 cut(s)	102, 1068, 1200
PfeI	GAWTC	7 cut(s)	614, 743, 1069, 1384, 1676, 1940, 2162
PleI	GAGTC	5 cut(s)	844, 1262, 1840, 2027, 2239
PpsI	GAGTC	5 cut(s)	844, 1262, 1840, 2027, 2239
Ppu21I	YACGTR	1 cut(s)	1340
PscI	ACATGT	1 cut(s)	528
Psp6I	CCWGG	5 cut(s)	159, 676, 1581, 1719, 1921
PspFI	CCCAGC	1 cut(s)	365
PspGI	CCWGG	5 cut(s)	159, 676, 1581, 1719, 1921
PspN4I	GGNNCC	6 cut(s)	336, 859, 1920, 1980, 1981, 2043
PspOMI	GGGCCC	1 cut(s)	1979
PspPI	GGNCC	4 cut(s)	1476, 1627, 1979, 1980
PstI	CTGCAG	3 cut(s)	1294, 1401, 2254
PstNI	CAGNNNCTG	1 cut(s)	2036
PsuI	RGATCY	2 cut(s)	857, 1301
PvuII	CAGCTG	1 cut(s)	2255
RsaI	GTAC	5 cut(s)	371, 1086, 1115, 1134, 1233
RsaNI	GTAC	5 cut(s)	370, 1085, 1114, 1133, 1232
RseI	CAYNNNNRTG	4 cut(s)	633, 834, 1157, 2005
SapI	GCTCTTC	1 cut(s)	613
SaqAI	TTAA	8 cut(s)	123, 768, 959, 1004, 1110, 1334, 1577, 1602
Sau3AI	GATC	5 cut(s)	61, 857, 1301, 1504, 1786
Sau96I	GGNCC	4 cut(s)	1476, 1627, 1979, 1980
ScaI	AGTACT	1 cut(s)	1233
SchI	GAGTC	5 cut(s)	844, 1262, 1841, 2027, 2240
ScrFI	CCNGG	6 cut(s)	161, 678, 1583, 1721, 1923, 2295
SduI	GDGCHC	2 cut(s)	160, 1983
SfaNI	GCATC	6 cut(s)	196, 538, 795, 2041, 2080, 2236
SfcI	CTRYAG	3 cut(s)	1290, 1397, 2250
SmiMI	CAYNNNNRTG	4 cut(s)	633, 834, 1157, 2005
SmlI	CTYRAG	3 cut(s)	697, 1576, 2154
SmoI	CTYRAG	3 cut(s)	697, 1576, 2154
SphI	GCATGC	3 cut(s)	632, 734, 898
SspMI	CTAG	6 cut(s)	461, 581, 804, 908, 1364, 2326
StyD4I	CCNGG	6 cut(s)	159, 676, 1581, 1719, 1921, 2293
StyI	CCWWGG	4 cut(s)	803, 816, 907, 1630
TaaI	ACNGT	7 cut(s)	666, 865, 886, 1039, 1285, 1409, 2170
TaiI	ACGT	8 cut(s)	74, 508, 827, 844, 1342, 1450, 1467, 2265
TaqI	TCGA	4 cut(s)	1000, 1458, 1507, 1764
TatI	WGTACW	3 cut(s)	1084, 1132, 1231
TauI	GCSGC	3 cut(s)	132, 985, 1489
TfiI	GAWTC	7 cut(s)	614, 743, 1069, 1384, 1676, 1940, 2162
Tru1I	TTAA	8 cut(s)	123, 768, 959, 1004, 1110, 1334, 1577, 1602
Tru9I	TTAA	8 cut(s)	123, 768, 959, 1004, 1110, 1334, 1577, 1602
TscAI	CASTG	3 cut(s)	563, 1414, 1789
TseFI	GTSAC	2 cut(s)	1214, 1815
TseI	GCWGC	9 cut(s)	638, 1052, 1559, 1778, 2093, 2249, 2252, 2255, 2288
Tsp45I	GTSAC	2 cut(s)	1214, 1815
TspDTI	ATGAA	8 cut(s)	105, 111, 326, 537, 1009, 1689, 1689, 2141
TspGWI	ACGGA	2 cut(s)	560, 1803
TspRI	CASTG	3 cut(s)	563, 1414, 1789
Vha464I	CTTAAG	1 cut(s)	1576
XapI	RAATTY	3 cut(s)	230, 1249, 1744
XceI	RCATGY	5 cut(s)	249, 532, 632, 734, 898
XmaJI	CCTAGG	2 cut(s)	803, 907
XmnI	GAANNNNTTC	3 cut(s)	102, 1068, 1200
XspI	CTAG	6 cut(s)	461, 581, 804, 908, 1364, 2326
ZraI	GACGTC	1 cut(s)	842
ZrmI	AGTACT	1 cut(s)	1233
Zsp2I	ATGCAT	1 cut(s)	788

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.