Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002321

Physical Location & Seq

Genomic Coordinates Reverse (-)

48660342 .. 48670453

Gene Structure 10112 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G030630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGACGATGGGGAACCTTGTTGAGGAGGAGGACCACCATCAAAACAATAACATCGACAAGTTTGGTCCTTTCTCGACGTATTTTCAGAAGGACACAGTGCTTAAAAATCAAAAGAATAACATGGTGATGGGGCACATTGAAAATGGCAGTGCTGAGCTGCAGGACAAGTTAAAGCCATTGGACGAGGATTTGAAAATTGAAAATTTTTGCCCTTCGTTGGATGAAGATGGCATTATTCTTCCAGTCACCTCTTTCTCTACATTGTTCAAGAAAAAAAAAGAAATATTTGTGCAAAATGCTTGGCCTACGGTGAAATCTTCTTTAGAAGACTATGGTATTTCGTGCGCACTGAATGTGGCAGAGGGTTCCATGACAGTTTCAACAACAACAAAGACTAGGGACCCAGATATTATTGAGAAGGCTAGGGAGCTTACTGAACTTTTGTCATTATCTGTTCCAGTGTATGAGGCAGTAAGAATACTGGATGCCAAATTGAAATGTGACTTCATTGCGATTGGACCTCAGAGAGGTGGGCTATGCGTAAAATATGGGATCAGTGTGGAGCAATTTCGTGAACGGTGGGAACGTTTCCTAGGCCCCAAGAACACTGGCTTGAAGACAATTCAGCGTCTGACAGGCTGCAGTGTTTTCTTTCATGGAAATTTCACTGTTGCTGTAATTGGTAAATCTGAAGGATTAAAGATGGTCAGGAGGATTCTGGTAGACTGCATTCGAAATAAAATGCGTCCTAGTATCCATATCAGAAGGCTTCGGATGAATCAGAATGAGCACAACCTTACCAAGAAGCTATTTGACCAAGGTGGATATAGATCTATCATGGAGGCATCAGTATTCATGAAAACCTCATTTGATTTTCATGAACATATAACTACAAAGTTTGTGGAAGCACTGCATCAGATACAAGATTCAGATATAGAGGCGATTGCAGATAAGCTCAGGTCTTCGGATTCTCTAGAAGTGCATGTTAATGCAGAAGAAACCCTTTGTGCTATAACAAGGCTTGCTCCACCTGGACTTGCTACTAAAATCTGTAATCCAAGTTTTATACAAAGATTGCTTCAGCATGCTGTGGAGGACTCTCAACGAAAATCTGTTCTCACCGGCTCATTATCGGTTTGCATCTCTTTGTTAGACCGTGAGAGGGAAGCTTTGAGAACAAATGCATGTATCAGTGAACACCAGCCTGCTCATGGATCTACAGTTACTGATAATAACGAGATTGTTGTGGCCATGCTCGACAGCCTAGGTGATTTGCTGAAACTTTTAGATGTTTCATCGGCGGACAATATGTTGTTAACTACATATGGCAAGTTACAGCCACCTCTTGGAAAACATCGTTTGAAGATTGTAGAGTTCATTTCAGTATTACTGTCAGTTGGTAGTCAAGCTGCTGAGAAGGAATTGATTCGTATTGCAGCAATACAAAAAGTCTTAGACTTGTTTTTTAGGTACCCATATAACAATTTTTTGCATTACCACATAGAGAACATAATCGTATCATGTTTGGAAAGCAAAAATGGGCCTCTTGTACAACATCTTCTTCGTGAATGTGATCTTGTTGGAAAAATACTTGAAGCAGAAAAGAATTTCACACTGGCCGCTGTTTCATTTACGCCGACAATTCCTGCTCAGGGTAGATCCCTACCCAGGAAAGGCAATATTGGACATTTAACACGTATATCCAACAAAATCATTCAACTGGGAAATCACAATAGGGAGATTCAGGCATATCTGCAGGAAAACAGTGTCTGGACTGAATGGCATGCAGAAGTCCTATTAAAGCGTAATGCAGTGGAGAATGTCTCCCAGTGGGCGTGCGGGCGGCCTATATCATCTCTGGATCGTGGACGCTTAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SAPS

Protein Analysis

626

Amino Acids

70.5

Weight (kDa)

7.6

Isoelectric Point (pI)

40.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	84 - 162	2.6e-18	Krr1 KH1 domain
KH_KRR1_2nd	PF21800	187 - 261	2e-15	KRR1 small subunit processome component, second KH domain
SAPS	PF04499	304 - 608	4.6e-46	SIT4 phosphatase-associated protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002321)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30470 AT1G30470 AT1G30470 AT2G28360 AT3G45190 AT3G45190
fragaria_vesca	FvH4_3g10000 FvH4_3g10000
malus_domestica	MD05G1274100.v1.1 MD10G1253800.v1.1
prunus_persica	Prupe.4G089700_v2.0.a1
pyrus_communis	pycom05g25550 pycom09g07810 pycom09g07840 pycom10g20940
rosa_chinensis	RchiOBHm_Chr5g0015881 RchiOBHm_Chr5g0049281 RchiOBHm_Chr5g0049291
rosa_laevigata	RLG00000034610
rosa_multiflora	Rmu_sc0000012.1_g000009 Rmu_sc0009674.1_g000007 Rmu_sc0012428.1_g000001
rosa_roxburghii	Rroxscaffold_1G00032370 Rroxscaffold_1G00032380 Rroxscaffold_1G00060720
rosa_rugosa	Rorug05G0029700 Rorug05G0029800 Rorug05G0247400 Rorug05G0247500 Rorug05G0247600
rosa_samantha	Rh5AG123400 Rh5AG324000 Rh5BG122300 Rh5BG334900 Rh5BG335000 Rh5CG133500 Rh5CG360000 Rh5DG121700 Rh5DG347000 Rh5DG347100
rosa_wichuraiana	Rw5G010650 Rw5G030630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	346
Acc65I	GGTACC	1 cut(s)	1470
AccB1I	GGYRCC	1 cut(s)	1470
AccB7I	CCANNNNNTGG	1 cut(s)	1346
AccI	GTMKAC	1 cut(s)	723
AciI	CCGC	4 cut(s)	1301, 1620, 1839, 1843
AclI	AACGTT	1 cut(s)	586
AclWI	GGATC	4 cut(s)	560, 1222, 1653, 1869
AcoI	YGGCCR	2 cut(s)	1248, 1617
AcsI	RAATTY	3 cut(s)	202, 661, 1606
AcuI	CTGAAG	2 cut(s)	711, 1064
AfaI	GTAC	2 cut(s)	1472, 1551
AfiI	CCNNNNNNNGG	9 cut(s)	22, 217, 527, 1162, 1211, 1346, 1652, 1668, 1673
AflII	CTTAAG	1 cut(s)	1873
AflIII	ACRYGT	1 cut(s)	1694
AjnI	CCWGG	2 cut(s)	1030, 1667
AluBI	AGCT	7 cut(s)	157, 430, 808, 955, 1169, 1409, 1878
AluI	AGCT	7 cut(s)	157, 430, 808, 955, 1169, 1409, 1878
Alw21I	GWGCWC	1 cut(s)	792
Alw26I	GTCTC	1 cut(s)	1828
AlwI	GGATC	4 cut(s)	560, 1222, 1653, 1869
AlwNI	CAGNNNCTG	3 cut(s)	631, 1226, 1770
AoxI	GGCC	6 cut(s)	302, 595, 1248, 1541, 1617, 1844
ApeKI	GCWGC	4 cut(s)	157, 639, 1409, 1436
ApoI	RAATTY	3 cut(s)	202, 661, 1606
Asp700I	GAANNNNTTC	1 cut(s)	1425
Asp718I	GGTACC	1 cut(s)	1470
AspA2I	CCTAGG	2 cut(s)	592, 1264
AspLEI	GCGC	1 cut(s)	347
AspS9I	GGNCC	6 cut(s)	31, 65, 400, 518, 596, 1541
AsuHPI	GGTGA	5 cut(s)	136, 238, 322, 1111, 1280
AsuII	TTCGAA	1 cut(s)	733
AvaII	GGWCC	4 cut(s)	31, 65, 400, 518
AvrII	CCTAGG	2 cut(s)	592, 1264
BaeGI	GKGCMC	1 cut(s)	135
BalI	TGGCCA	1 cut(s)	1250
BanI	GGYRCC	1 cut(s)	1470
BarI	GAAGNNNNNNTAC	2 cut(s)	1542, 1574
BbsI	GAAGAC	3 cut(s)	333, 623, 954
Bbv12I	GWGCWC	1 cut(s)	792
BbvI	GCAGC	4 cut(s)	144, 626, 1396, 1448
BccI	CCATC	4 cut(s)	45, 121, 221, 697
BciT130I	CCWGG	2 cut(s)	1032, 1669
BciVI	GTATCC	1 cut(s)	764
BcoDI	GTCTC	1 cut(s)	1828
BfaI	CTAG	7 cut(s)	396, 423, 593, 750, 974, 1265, 1879
BfmI	CTRYAG	4 cut(s)	158, 640, 1218, 1754
BfrI	CTTAAG	1 cut(s)	1873
BfuI	GTATCC	1 cut(s)	764
BglII	AGATCT	1 cut(s)	830
BisI	GCNGC	6 cut(s)	158, 640, 1410, 1437, 1620, 1844
BlnI	CCTAGG	2 cut(s)	592, 1264
BlpI	GCTNAGC	1 cut(s)	153
BlsI	GCNGC	6 cut(s)	159, 641, 1411, 1438, 1621, 1845
Bme1390I	CCNGG	2 cut(s)	1032, 1669
Bme18I	GGWCC	4 cut(s)	31, 65, 400, 518
BmgT120I	GGNCC	6 cut(s)	31, 65, 400, 518, 596, 1541
BmiI	GGNNCC	6 cut(s)	14, 367, 401, 402, 598, 1472
BmrFI	CCNGG	2 cut(s)	1032, 1669
BmrI	ACTGGG	2 cut(s)	1730, 1822
BmsI	GCATC	4 cut(s)	475, 854, 922, 1149
BmuI	ACTGGG	2 cut(s)	1730, 1822
BpiI	GAAGAC	3 cut(s)	333, 623, 954
BplI	GAGNNNNNCTC	2 cut(s)	1808, 1840
Bpu10I	CCTNAGC	2 cut(s)	956, 1650
Bpu1102I	GCTNAGC	1 cut(s)	153
Bpu14I	TTCGAA	1 cut(s)	733
BsaAI	YACGTR	1 cut(s)	1697
BsaBI	GATNNNNATC	1 cut(s)	829
BsaJI	CCNNGG	4 cut(s)	592, 817, 1264, 1667
Bsc4I	CCNNNNNNNGG	9 cut(s)	22, 217, 527, 1162, 1211, 1346, 1652, 1668, 1673
Bse118I	RCCGGY	1 cut(s)	1121
Bse1I	ACTGG	7 cut(s)	242, 458, 486, 613, 1620, 1725, 1828
Bse3DI	GCAATG	1 cut(s)	507
Bse8I	GATNNNNATC	1 cut(s)	829
BseBI	CCWGG	2 cut(s)	1032, 1669
BseDI	CCNNGG	4 cut(s)	592, 817, 1264, 1667
BseGI	GGATG	3 cut(s)	226, 490, 780
BseJI	GATNNNNATC	1 cut(s)	829
BseLI	CCNNNNNNNGG	9 cut(s)	22, 217, 527, 1162, 1211, 1346, 1652, 1668, 1673
BseMI	GCAATG	1 cut(s)	507
BseMII	CTCAG	5 cut(s)	144, 536, 970, 1404, 1664
BseNI	ACTGG	7 cut(s)	242, 458, 486, 613, 1620, 1725, 1828
BseRI	GAGGAG	2 cut(s)	38, 41
BseSI	GKGCMC	1 cut(s)	135
BseXI	GCAGC	4 cut(s)	144, 626, 1396, 1448
BshFI	GGCC	6 cut(s)	304, 597, 1250, 1543, 1619, 1846
BshNI	GGYRCC	1 cut(s)	1470
BsiHKAI	GWGCWC	1 cut(s)	792
BsiSI	CCGG	1 cut(s)	1122
BslFI	GGGAC	1 cut(s)	413
BslI	CCNNNNNNNGG	9 cut(s)	22, 217, 527, 1162, 1211, 1346, 1652, 1668, 1673
BsmAI	GTCTC	1 cut(s)	1828
BsmFI	GGGAC	1 cut(s)	413
BsmI	GAATGC	1 cut(s)	729
BsnI	GGCC	6 cut(s)	304, 597, 1250, 1543, 1619, 1846
Bsp119I	TTCGAA	1 cut(s)	733
Bsp1286I	GDGCHC	2 cut(s)	135, 792
Bsp1407I	TGTACA	1 cut(s)	1549
Bsp143I	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
Bsp1720I	GCTNAGC	1 cut(s)	153
BspACI	CCGC	4 cut(s)	1301, 1620, 1839, 1843
BspANI	GGCC	6 cut(s)	304, 597, 1250, 1543, 1619, 1846
BspCNI	CTCAG	5 cut(s)	145, 535, 969, 1405, 1663
BspHI	TCATGA	2 cut(s)	855, 877
BspLI	GGNNCC	6 cut(s)	14, 367, 401, 402, 598, 1472
BspMAI	CTGCAG	3 cut(s)	162, 644, 1758
BspPI	GGATC	4 cut(s)	560, 1222, 1653, 1869
BspT104I	TTCGAA	1 cut(s)	733
BspT107I	GGYRCC	1 cut(s)	1470
BspTI	CTTAAG	1 cut(s)	1873
BsrDI	GCAATG	1 cut(s)	507
BsrFI	RCCGGY	1 cut(s)	1121
BsrGI	TGTACA	1 cut(s)	1549
BsrI	ACTGG	7 cut(s)	242, 458, 486, 613, 1620, 1725, 1828
BssAI	RCCGGY	1 cut(s)	1121
BssECI	CCNNGG	4 cut(s)	592, 817, 1264, 1667
BssMI	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
BssT1I	CCWWGG	3 cut(s)	592, 817, 1264
Bst2UI	CCWGG	2 cut(s)	1032, 1669
Bst4CI	ACNGT	9 cut(s)	97, 310, 376, 579, 670, 1157, 1222, 1392, 1766
BstAFI	CTTAAG	1 cut(s)	1873
BstAUI	TGTACA	1 cut(s)	1549
BstBAI	YACGTR	1 cut(s)	1697
BstBI	TTCGAA	1 cut(s)	733
BstC8I	GCNNGC	6 cut(s)	1023, 1086, 1206, 1785, 1837, 1841
BstDEI	CTNAG	6 cut(s)	153, 522, 956, 1413, 1453, 1650
BstENI	CCTNNNNNAGG	2 cut(s)	20, 525
BstF5I	GGATG	3 cut(s)	226, 490, 780
BstHHI	GCGC	1 cut(s)	347
BstKTI	GATC	6 cut(s)	555, 833, 1217, 1576, 1661, 1864
BstMAI	GTCTC	1 cut(s)	1828
BstMBI	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
BstNI	CCWGG	2 cut(s)	1032, 1669
BstNSI	RCATGY	4 cut(s)	986, 1088, 1188, 1787
BstSCI	CCNGG	2 cut(s)	1030, 1667
BstSFI	CTRYAG	4 cut(s)	158, 640, 1218, 1754
BstSLI	GKGCMC	1 cut(s)	135
BstV1I	GCAGC	4 cut(s)	144, 626, 1396, 1448
BstV2I	GAAGAC	3 cut(s)	333, 623, 954
BstX2I	RGATCY	3 cut(s)	830, 1214, 1658
BstYI	RGATCY	3 cut(s)	830, 1214, 1658
BsuI	GTATCC	1 cut(s)	764
BsuRI	GGCC	6 cut(s)	304, 597, 1250, 1543, 1619, 1846
BtsCI	GGATG	3 cut(s)	226, 490, 780
BtsI	GCAGTG	4 cut(s)	154, 649, 908, 1818
Cac8I	GCNNGC	6 cut(s)	1023, 1086, 1206, 1785, 1837, 1841
CaiI	CAGNNNCTG	3 cut(s)	631, 1226, 1770
CciI	TCATGA	2 cut(s)	855, 877
CfoI	GCGC	1 cut(s)	347
Cfr10I	RCCGGY	1 cut(s)	1121
Cfr13I	GGNCC	6 cut(s)	31, 65, 400, 518, 596, 1541
CseI	GACGC	2 cut(s)	617, 734
Csp6I	GTAC	2 cut(s)	1471, 1550
CspCI	CAANNNNNGTGG	2 cut(s)	882, 917
CviQI	GTAC	2 cut(s)	1471, 1550
DdeI	CTNAG	6 cut(s)	153, 522, 956, 1413, 1453, 1650
DpnI	GATC	6 cut(s)	554, 832, 1216, 1575, 1660, 1863
DpnII	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
EaeI	YGGCCR	2 cut(s)	1248, 1617
EciI	GGCGGA	1 cut(s)	1316
Eco130I	CCWWGG	3 cut(s)	592, 817, 1264
Eco47I	GGWCC	4 cut(s)	31, 65, 400, 518
Eco57I	CTGAAG	2 cut(s)	711, 1064
EcoNI	CCTNNNNNAGG	2 cut(s)	20, 525
EcoO109I	RGGNCCY	2 cut(s)	400, 596
EcoRII	CCWGG	2 cut(s)	1030, 1667
EcoT14I	CCWWGG	3 cut(s)	592, 817, 1264
EcoT22I	ATGCAT	1 cut(s)	1186
ErhI	CCWWGG	3 cut(s)	592, 817, 1264
FalI	AAGNNNNNCTT	2 cut(s)	987, 1019
FaqI	GGGAC	1 cut(s)	413
FauI	CCCGC	1 cut(s)	1832
FauNDI	CATATG	1 cut(s)	1324
FblI	GTMKAC	1 cut(s)	723
Fnu4HI	GCNGC	6 cut(s)	158, 640, 1410, 1437, 1620, 1844
FokI	GGATG	3 cut(s)	233, 497, 787
Fsp4HI	GCNGC	6 cut(s)	158, 640, 1410, 1437, 1620, 1844
FspAI	RTGCGCAY	1 cut(s)	346
FspBI	CTAG	7 cut(s)	396, 423, 593, 750, 974, 1265, 1879
FspI	TGCGCA	1 cut(s)	346
GlaI	GCGC	1 cut(s)	346
GluI	GCNGC	6 cut(s)	158, 640, 1410, 1437, 1620, 1844
HaeIII	GGCC	6 cut(s)	304, 597, 1250, 1543, 1619, 1846
HapII	CCGG	1 cut(s)	1122
HgaI	GACGC	2 cut(s)	617, 734
HhaI	GCGC	1 cut(s)	347
Hin6I	GCGC	1 cut(s)	345
HinP1I	GCGC	1 cut(s)	345
HincII	GTYRAC	1 cut(s)	1317
HindII	GTYRAC	1 cut(s)	1317
HindIII	AAGCTT	1 cut(s)	1167
HinfI	GANTC	7 cut(s)	715, 778, 926, 968, 1097, 1426, 1741
HpaI	GTTAAC	1 cut(s)	1317
HpaII	CCGG	1 cut(s)	1122
HphI	GGTGA	5 cut(s)	136, 238, 322, 1111, 1280
Hpy166II	GTNNAC	5 cut(s)	575, 724, 1196, 1317, 1868
Hpy8I	GTNNAC	5 cut(s)	575, 724, 1196, 1317, 1868
Hpy99I	CGWCG	1 cut(s)	79
HpyAV	CCTTC	6 cut(s)	82, 222, 412, 686, 759, 1411
HpyCH4III	ACNGT	9 cut(s)	97, 310, 376, 579, 670, 1157, 1222, 1392, 1766
HpyCH4IV	ACGT	3 cut(s)	77, 586, 1696
HpyF3I	CTNAG	6 cut(s)	153, 522, 956, 1413, 1453, 1650
HpySE526I	ACGT	3 cut(s)	77, 586, 1696
HspAI	GCGC	1 cut(s)	345
KflI	GGGWCCC	1 cut(s)	400
KpnI	GGTACC	1 cut(s)	1474
KspAI	GTTAAC	1 cut(s)	1317
Kzo9I	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
LmnI	GCTCC	3 cut(s)	427, 562, 1030
Lsp1109I	GCAGC	4 cut(s)	144, 626, 1396, 1448
LweI	GCATC	4 cut(s)	475, 854, 922, 1149
MaeI	CTAG	7 cut(s)	396, 423, 593, 750, 974, 1265, 1879
MaeII	ACGT	3 cut(s)	77, 586, 1696
MaeIII	GTNAC	4 cut(s)	244, 500, 1222, 1332
MalI	GATC	6 cut(s)	554, 832, 1216, 1575, 1660, 1863
MboI	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
MflI	RGATCY	3 cut(s)	830, 1214, 1658
MhlI	GDGCHC	2 cut(s)	135, 792
MlsI	TGGCCA	1 cut(s)	1250
MluNI	TGGCCA	1 cut(s)	1250
MlyI	GAGTC	1 cut(s)	1091
MmeI	TCCRAC	3 cut(s)	198, 1561, 1728
Mox20I	TGGCCA	1 cut(s)	1250
Mph1103I	ATGCAT	1 cut(s)	1186
MroXI	GAANNNNTTC	1 cut(s)	1425
MscI	TGGCCA	1 cut(s)	1250
MseI	TTAA	8 cut(s)	102, 170, 698, 987, 1316, 1691, 1799, 1874
MslI	CAYNNNNRTG	2 cut(s)	125, 987
Msp20I	TGGCCA	1 cut(s)	1250
MspA1I	CMGCKG	1 cut(s)	1622
MspCI	CTTAAG	1 cut(s)	1873
MspI	CCGG	1 cut(s)	1122
MspR9I	CCNGG	2 cut(s)	1032, 1669
Mva1269I	GAATGC	1 cut(s)	729
MvaI	CCWGG	2 cut(s)	1032, 1669
NdeI	CATATG	1 cut(s)	1324
NdeII	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
NlaIV	GGNNCC	6 cut(s)	14, 367, 401, 402, 598, 1472
NmuCI	GTSAC	2 cut(s)	244, 500
NsbI	TGCGCA	1 cut(s)	346
NsiI	ATGCAT	1 cut(s)	1186
NspI	RCATGY	4 cut(s)	986, 1088, 1188, 1787
NspV	TTCGAA	1 cut(s)	733
PaeI	GCATGC	2 cut(s)	1088, 1787
PagI	TCATGA	2 cut(s)	855, 877
PcsI	WCGNNNNNNNCGW	1 cut(s)	583
PctI	GAATGC	1 cut(s)	729
PdmI	GAANNNNTTC	1 cut(s)	1425
PfeI	GAWTC	6 cut(s)	715, 778, 926, 968, 1426, 1741
PflMI	CCANNNNNTGG	1 cut(s)	1346
PkrI	GCNGC	6 cut(s)	159, 641, 1411, 1438, 1621, 1845
PleI	GAGTC	1 cut(s)	1091
PpsI	GAGTC	1 cut(s)	1091
Ppu21I	YACGTR	1 cut(s)	1697
PpuMI	RGGWCCY	1 cut(s)	400
Psp1406I	AACGTT	1 cut(s)	586
Psp5II	RGGWCCY	1 cut(s)	400
Psp6I	CCWGG	2 cut(s)	1030, 1667
PspGI	CCWGG	2 cut(s)	1030, 1667
PspN4I	GGNNCC	6 cut(s)	14, 367, 401, 402, 598, 1472
PspPI	GGNCC	6 cut(s)	31, 65, 400, 518, 596, 1541
PspPPI	RGGWCCY	1 cut(s)	400
PstI	CTGCAG	3 cut(s)	162, 644, 1758
PstNI	CAGNNNCTG	3 cut(s)	631, 1226, 1770
PsuI	RGATCY	3 cut(s)	830, 1214, 1658
RsaI	GTAC	2 cut(s)	1472, 1551
RsaNI	GTAC	2 cut(s)	1471, 1550
RseI	CAYNNNNRTG	2 cut(s)	125, 987
SaqAI	TTAA	8 cut(s)	102, 170, 698, 987, 1316, 1691, 1799, 1874
SatI	GCNGC	6 cut(s)	158, 640, 1410, 1437, 1620, 1844
Sau3AI	GATC	6 cut(s)	552, 830, 1214, 1573, 1658, 1861
Sau96I	GGNCC	6 cut(s)	31, 65, 400, 518, 596, 1541
SchI	GAGTC	1 cut(s)	1091
ScrFI	CCNGG	2 cut(s)	1032, 1669
SduI	GDGCHC	2 cut(s)	135, 792
SfaNI	GCATC	4 cut(s)	475, 854, 922, 1149
SfcI	CTRYAG	4 cut(s)	158, 640, 1218, 1754
SfuI	TTCGAA	1 cut(s)	733
SinI	GGWCC	4 cut(s)	31, 65, 400, 518
SmiMI	CAYNNNNRTG	2 cut(s)	125, 987
SmlI	CTYRAG	1 cut(s)	1873
SmoI	CTYRAG	1 cut(s)	1873
SphI	GCATGC	2 cut(s)	1088, 1787
SsiI	CCGC	4 cut(s)	1301, 1620, 1839, 1843
SspI	AATATT	2 cut(s)	285, 1681
SspMI	CTAG	7 cut(s)	396, 423, 593, 750, 974, 1265, 1879
StyD4I	CCNGG	2 cut(s)	1030, 1667
StyI	CCWWGG	3 cut(s)	592, 817, 1264
TaaI	ACNGT	9 cut(s)	97, 310, 376, 579, 670, 1157, 1222, 1392, 1766
TaiI	ACGT	3 cut(s)	80, 589, 1699
TaqI	TCGA	4 cut(s)	54, 74, 733, 1257
TatI	WGTACW	1 cut(s)	1549
TauI	GCSGC	2 cut(s)	1622, 1846
TfiI	GAWTC	6 cut(s)	715, 778, 926, 968, 1426, 1741
Tru1I	TTAA	8 cut(s)	102, 170, 698, 987, 1316, 1691, 1799, 1874
Tru9I	TTAA	8 cut(s)	102, 170, 698, 987, 1316, 1691, 1799, 1874
TseFI	GTSAC	2 cut(s)	244, 500
TseI	GCWGC	4 cut(s)	157, 639, 1409, 1436
Tsp45I	GTSAC	2 cut(s)	244, 500
Van91I	CCANNNNNTGG	1 cut(s)	1346
Vha464I	CTTAAG	1 cut(s)	1873
VpaK11BI	GGWCC	4 cut(s)	31, 65, 400, 518
XagI	CCTNNNNNAGG	2 cut(s)	20, 525
XapI	RAATTY	3 cut(s)	202, 661, 1606
XbaI	TCTAGA	1 cut(s)	973
XceI	RCATGY	4 cut(s)	986, 1088, 1188, 1787
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1208
XmaJI	CCTAGG	2 cut(s)	592, 1264
XmiI	GTMKAC	1 cut(s)	723
XmnI	GAANNNNTTC	1 cut(s)	1425
XspI	CTAG	7 cut(s)	396, 423, 593, 750, 974, 1265, 1879
Zsp2I	ATGCAT	1 cut(s)	1186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.