Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0003033

Physical Location & Seq

Genomic Coordinates Forward (+)

3754221 .. 3756367

Gene Structure 2147 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGCTGAGAACGGCGAAGAGAAATTGTTAGCTATGGCGCGCCACATAGCCAAGACTCTGGGCCACAACGATAATATGGCCGACGATATTTTGCAGATTTTTTCCAACTTCGACGGCAGGTTCTCTCGCGAGAAATTGGCTTCCGACGACGAACGAACTCGGAGCTGTGCTGCTCTCGAGCTTTCGCTGAAGTCGCTGGACCGTCAGATCTTGCAGTATGTGGCTACTGACCACTCAATCTGGTCTGACTCCGCCGATTCCGCGGCGTTTCTTGACTCGATCGACGAGCTCATCGTCACCATCAGAGACTGGACTCCGATGGCCGACGACAAGTCCGTCGGCGTCTGCCTGGCGGGCGCCGAGGATCTTATGCAGCAGGCTATGTTCCGGCTTGAGGACGAGTTCAGATCCTTGGTCGAACGCGGCGCCGAGTCCCGAGAACTGACTCGGGCGTTTCGCGGTGAGTCGAATGGCGCGTTGTCGTTTGACTCGGGAGATGATGAAGAAGAAGAAGAAGAAGATGAGGTGATCGGGGACGGGGAGGAACACCAGATCCCTGTTGCACAGCCGATCGGCGACTACGACATCGTGATCGACGCGCTTCCTTCTGGAACCATCAACGACCTCCATGAGATCGCGAAGCGGATGGTGGCGGCGGGTTTCGGAAAGGAGTGCTCGCACGTGTACTCCAGCTGCCGGAGAGAGTTCCTGGAAGAGAGCTTGTCGAGGCTAGGGTTGCAGAAGCTGAGCATCGAAGAGGTTCAGAAGACGCCATGCAAACGTCGCGCTTCGGATTCTGTTTCCGAGCGAGCGTCGACTCTGATCGATCGCATCTTCTACGGCCTCTCCTCCGCCGCGGACCTCTCGTTCATGGAGGTTTGCCGAGGCTCGACGATTCAGATACTGAATTTCGCCGACGCGGTGGCGATCGGAAGCCGATCGCCGGAGCGATTGTTCAAGATTCTCGACGTGTTCGAGACTTTGCGGGATTTGATGCCCGAATTCGAGTCAGTGTTCTCCGATCAGTACTGCTTGTTTCTCCGGAACGAAGCGATTACGATTTGGAAAAGGTTAGGCGAAGCGATCAGAGGCATTTTCATGGAGTTGGAGAATCTGATCAGTCTTGACCCTGCGAAAACTCCAGTTCCTGGCGGCGGATTGCATCCAATCACTCGATATGTGATGAATTATCTTCGGGCAGCTTGCCGATCGCGCCAGACCCTTGAGCAGGTTTTCGAGGACAGTTCTGCGGTCTCTCATCAGCCCAAGGTTGATGACCAAAGCTCGTCCATGTCGGTACAAATGGCATGGATTATGGAGCTTCTGGAGAGCAATTTGGAAGCCAAGTCGAAGATTTACAGGGACTCTGCTTTGTGCTGTGTCTTCATGATGAACAATGGGAGGTACATCGTGCAGAAAGCGAAAGACAGCGAGTTGGGATTGCTATTGGGCGATGATTGGATCCGAAAACACACTGCAAAAGTCCGGCAGCACCATGTGAATTACCAGAGAAGCTCATGGAACAAGGTGCTTGGAGTGTTGAAGCTCGATAGCGGCTCATTGGCGCCAAGTGCTGCTGTCAAGTCCATGAAGGAGAAGCTCAAGTTGTTCAACATCTACTTCGATGAGATCTGTAAAACGCAGTCCAATTGGGTAGTTTTCGACGATCAGTGCAGAGACGAATTGAGAATTTCGCTTGTCAAAATCGTGTTGCCAGCGTATCAGAGCTTCATCGGTAGGTTTCGGAGTGTTCCAGAAATCGGAAGGCATGATAAGTACATTAAGTATGCTAGTGAGGACATTGAAGCTAAGATCAATGACCTGTTCCGCGGCAGTAGAGGATCCGCCGGCGGTGTCGCCTTGTATGTAGTCGAAAACAAGTTTACAGAAAGTTTTGTTTATGAATTGAAAACGTCGAAGCCAAGACGTCGATCGGAAACCAGTTTTTCGTGCCTGAAAGGCTCCCCGAACGGGACTTCGTTATACATACAGATCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000145 GO:0001101 GO:0002237 GO:0002238 GO:0002831 GO:0002833 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006810 GO:0006887 GO:0006950 GO:0006952 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010119 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016192 GO:0023051 GO:0023056 GO:0031347 GO:0031349 GO:0031982 GO:0032101 GO:0032103 GO:0032940 GO:0032991 GO:0042221 GO:0042545 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043230 GO:0043231 GO:0043621 GO:0043900 GO:0043902 GO:0044421 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0045229 GO:0046903 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0065007 GO:0070062 GO:0071554 GO:0071555 GO:0071840 GO:0071944 GO:0080134 GO:0090333 GO:0098542 GO:0099023 GO:0099568 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901421 GO:1901700 GO:1902288 GO:1902290 GO:1903561 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko04910 map04910

Pfam Domains

Protein Families

Exo70

Protein Analysis

667

Amino Acids

75.1

Weight (kDa)

5.2

Isoelectric Point (pI)

49.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo70_N	PF20669	63 - 140	8.2e-09	Exocyst complex component Exo70 N-terminal
Exo70_C	PF03081	270 - 607	3.9e-114	Exo70 exocyst complex subunit C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003033)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58430
fragaria_vesca	FvH4_3g39790
malus_domestica	MD03G1056800.v1.1
prunus_persica	Prupe.6G048000_v2.0.a1
pyrus_communis	pycom03g04520 pycom11g04860
rosa_chinensis	RchiOBHm_Chr5g0004641 RchiOBHm_Chr5g0071681
rosa_laevigata	RLG00000002358 RLG00000008736 RLG00000018357 RLG00000026108 RLG00000029385 RLG00000036239
rosa_multiflora	Rmu_sc0002255.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005050 Rroxscaffold_1G00009490 Rroxscaffold_4G00312970
rosa_rugosa	Rorug05G0399200 Rorug06G0105500
rosa_samantha	Rh1BG001700 Rh1DG215500 Rh2CG371300 Rh5AG470200 Rh5BG236300 Rh5BG489700 Rh5BG566000 Rh5CG513500 Rh5CG588000 Rh5DG500500 Rh6AG501300 Rh6BG021300 Rh6BG467900 Rh7AG147100 Rh7BG007900 Rh7CG151300
rosa_wichuraiana	Rw5G036600 Rw5G043690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	335
AatII	GACGTC	1 cut(s)	1930
Acc36I	ACCTGC	2 cut(s)	108, 1219
AccB1I	GGYRCC	3 cut(s)	356, 425, 1564
AccB7I	CCANNNNNTGG	1 cut(s)	1148
AccI	GTMKAC	1 cut(s)	815
AccIII	TCCGGA	1 cut(s)	1041
AclWI	GGATC	7 cut(s)	372, 402, 547, 1456, 1469, 1836, 1849
AcoI	YGGCCR	2 cut(s)	78, 321
AcsI	RAATTY	3 cut(s)	907, 1001, 1689
AcuI	CTGAAG	1 cut(s)	209
AcvI	CACGTG	1 cut(s)	682
AcyI	GRCGYC	6 cut(s)	342, 357, 426, 770, 1565, 1927
AdeI	CACNNNGTG	1 cut(s)	1498
AfaI	GTAC	5 cut(s)	686, 1028, 1299, 1406, 1778
AfiI	CCNNNNNNNGG	8 cut(s)	394, 696, 943, 1148, 1154, 1228, 1760, 1971
AflIII	ACRYGT	2 cut(s)	681, 969
AgsI	TTSAA	5 cut(s)	958, 1543, 1612, 1805, 1909
AhdI	GACNNNNNGTC	1 cut(s)	331
AjiI	CACGTC	1 cut(s)	970
AjnI	CCWGG	3 cut(s)	348, 708, 1147
AloI	GAACNNNNNNTCC	6 cut(s)	537, 569, 851, 883, 938, 970
Alw21I	GWGCWC	2 cut(s)	291, 677
Alw26I	GTCTC	4 cut(s)	300, 971, 1258, 1671
AlwI	GGATC	7 cut(s)	372, 402, 547, 1456, 1469, 1836, 1849
AlwNI	CAGNNNCTG	4 cut(s)	309, 745, 904, 1148
Ama87I	CYCGRG	4 cut(s)	176, 435, 447, 490
Aor13HI	TCCGGA	1 cut(s)	1041
AoxI	GGCC	4 cut(s)	61, 78, 321, 841
ApeKI	GCWGC	6 cut(s)	170, 373, 693, 1199, 1489, 1574
ApoI	RAATTY	3 cut(s)	907, 1001, 1689
AscI	GGCGCGCC	1 cut(s)	38
Asp700I	GAANNNNTTC	1 cut(s)	759
AspLEI	GCGC	9 cut(s)	40, 42, 359, 428, 476, 601, 788, 1215, 1567
AspS9I	GGNCC	3 cut(s)	61, 199, 859
AsuHPI	GGTGA	3 cut(s)	289, 473, 538
AvaI	CYCGRG	4 cut(s)	176, 435, 447, 490
AvaII	GGWCC	2 cut(s)	199, 859
BamHI	GGATCC	2 cut(s)	1461, 1841
BanI	GGYRCC	3 cut(s)	356, 425, 1564
BanII	GRGCYC	1 cut(s)	291
BarI	GAAGNNNNNNTAC	2 cut(s)	1712, 1744
BbrPI	CACGTG	1 cut(s)	682
BbsI	GAAGAC	2 cut(s)	773, 1375
Bbv12I	GWGCWC	2 cut(s)	291, 677
BbvI	GCAGC	6 cut(s)	157, 385, 680, 1211, 1501, 1561
BccI	CCATC	4 cut(s)	308, 313, 623, 640
BceAI	ACGGC	3 cut(s)	28, 130, 856
BciT130I	CCWGG	3 cut(s)	350, 710, 1149
BclI	TGATCA	1 cut(s)	1116
BcoDI	GTCTC	4 cut(s)	300, 971, 1258, 1671
BfaI	CTAG	2 cut(s)	731, 1791
BfoI	RGCGCY	3 cut(s)	360, 429, 1568
BfuAI	ACCTGC	2 cut(s)	108, 1219
BglI	GCCNNNNNGGC	2 cut(s)	354, 1959
BglII	AGATCT	2 cut(s)	207, 1629
BlpI	GCTNAGC	1 cut(s)	746
BmcAI	AGTACT	1 cut(s)	1028
Bme1390I	CCNGG	3 cut(s)	350, 710, 1149
Bme18I	GGWCC	2 cut(s)	199, 859
BmeRI	GACNNNNNGTC	1 cut(s)	331
BmeT110I	CYCGRG	4 cut(s)	176, 435, 447, 490
BmgBI	CACGTC	1 cut(s)	970
BmgT120I	GGNCC	3 cut(s)	61, 199, 859
BmiI	GGNNCC	7 cut(s)	358, 427, 613, 1463, 1566, 1843, 1963
BmrFI	CCNGG	3 cut(s)	350, 710, 1149
BmsI	GCATC	4 cut(s)	759, 840, 984, 1171
BpiI	GAAGAC	2 cut(s)	773, 1375
BpmI	CTGGAG	3 cut(s)	673, 1125, 1346
Bpu1102I	GCTNAGC	1 cut(s)	746
BpuEI	CTTGAG	3 cut(s)	413, 1244, 1586
Bsa29I	ATCGAT	1 cut(s)	825
BsaAI	YACGTR	1 cut(s)	682
BsaHI	GRCGYC	6 cut(s)	342, 357, 426, 770, 1565, 1927
BsaI	GGTCTC	1 cut(s)	1258
BsaJI	CCNNGG	7 cut(s)	261, 360, 411, 855, 883, 1266, 1828
BsaWI	WCCGGW	1 cut(s)	1041
BsaXI	ACNNNNNCTCC	6 cut(s)	671, 701, 830, 860, 938, 968
Bsc4I	CCNNNNNNNGG	8 cut(s)	394, 696, 943, 1148, 1154, 1228, 1760, 1971
Bse118I	RCCGGY	1 cut(s)	1847
Bse1I	ACTGG	3 cut(s)	314, 1142, 1941
BseAI	TCCGGA	1 cut(s)	1041
BseBI	CCWGG	3 cut(s)	350, 710, 1149
BseCI	ATCGAT	1 cut(s)	825
BseDI	CCNNGG	7 cut(s)	261, 360, 411, 855, 883, 1266, 1828
BseGI	GGATG	2 cut(s)	651, 1162
BseLI	CCNNNNNNNGG	8 cut(s)	394, 696, 943, 1148, 1154, 1228, 1760, 1971
BseMII	CTCAG	1 cut(s)	737
BseNI	ACTGG	3 cut(s)	314, 1142, 1941
BsePI	GCGCGC	1 cut(s)	38
BseRI	GAGGAG	1 cut(s)	838
BseXI	GCAGC	6 cut(s)	157, 385, 680, 1211, 1501, 1561
BsgI	GTGCAG	2 cut(s)	1433, 1693
Bsh1285I	CGRYCG	7 cut(s)	282, 573, 829, 930, 941, 1211, 1934
BshFI	GGCC	4 cut(s)	63, 80, 323, 843
BshNI	GGYRCC	3 cut(s)	356, 425, 1564
BshVI	ATCGAT	1 cut(s)	825
BsiEI	CGRYCG	7 cut(s)	282, 573, 829, 930, 941, 1211, 1934
BsiHKAI	GWGCWC	2 cut(s)	291, 677
BsiHKCI	CYCGRG	4 cut(s)	176, 435, 447, 490
BsiSI	CCGG	6 cut(s)	388, 697, 944, 1042, 1486, 1848
BslFI	GGGAC	4 cut(s)	418, 548, 1376, 1987
BslI	CCNNNNNNNGG	8 cut(s)	394, 696, 943, 1148, 1154, 1228, 1760, 1971
BsmAI	GTCTC	4 cut(s)	300, 971, 1258, 1671
BsmBI	CGTCTC	1 cut(s)	1671
BsmFI	GGGAC	4 cut(s)	418, 548, 1376, 1987
BsnI	GGCC	4 cut(s)	63, 80, 323, 843
Bso31I	GGTCTC	1 cut(s)	1258
BsoBI	CYCGRG	4 cut(s)	176, 435, 447, 490
Bsp1286I	GDGCHC	2 cut(s)	291, 677
Bsp13I	TCCGGA	1 cut(s)	1041
Bsp1720I	GCTNAGC	1 cut(s)	746
Bsp68I	TCGCGA	2 cut(s)	129, 638
BspANI	GGCC	4 cut(s)	63, 80, 323, 843
BspCNI	CTCAG	1 cut(s)	738
BspDI	ATCGAT	1 cut(s)	825
BspEI	TCCGGA	1 cut(s)	1041
BspHI	TCATGA	1 cut(s)	1386
BspLI	GGNNCC	7 cut(s)	358, 427, 613, 1463, 1566, 1843, 1963
BspMI	ACCTGC	2 cut(s)	108, 1219
BspPI	GGATC	7 cut(s)	372, 402, 547, 1456, 1469, 1836, 1849
BspT107I	GGYRCC	3 cut(s)	356, 425, 1564
BspTNI	GGTCTC	1 cut(s)	1258
BsrFI	RCCGGY	1 cut(s)	1847
BsrI	ACTGG	3 cut(s)	314, 1142, 1941
BssAI	RCCGGY	1 cut(s)	1847
BssECI	CCNNGG	7 cut(s)	261, 360, 411, 855, 883, 1266, 1828
BssHII	GCGCGC	1 cut(s)	38
BssNI	GRCGYC	6 cut(s)	342, 357, 426, 770, 1565, 1927
BssT1I	CCWWGG	2 cut(s)	411, 1266
Bst2UI	CCWGG	3 cut(s)	350, 710, 1149
Bst4CI	ACNGT	2 cut(s)	203, 1244
Bst6I	CTCTTC	3 cut(s)	12, 708, 750
BstACI	GRCGYC	6 cut(s)	342, 357, 426, 770, 1565, 1927
BstBAI	YACGTR	1 cut(s)	682
BstC8I	GCNNGC	8 cut(s)	40, 355, 378, 677, 810, 1204, 1716, 1849
BstDEI	CTNAG	3 cut(s)	6, 746, 1809
BstDSI	CCRYGG	3 cut(s)	261, 855, 1828
BstENI	CCTNNNNNAGG	1 cut(s)	1226
BstF5I	GGATG	2 cut(s)	651, 1162
BstH2I	RGCGCY	3 cut(s)	360, 429, 1568
BstHHI	GCGC	9 cut(s)	40, 42, 359, 428, 476, 601, 788, 1215, 1567
BstMAI	GTCTC	4 cut(s)	300, 971, 1258, 1671
BstMCI	CGRYCG	7 cut(s)	282, 573, 829, 930, 941, 1211, 1934
BstMWI	GCNNNNNNNGC	8 cut(s)	193, 260, 354, 736, 783, 1212, 1571, 1959
BstNI	CCWGG	3 cut(s)	350, 710, 1149
BstSCI	CCNGG	3 cut(s)	348, 708, 1147
BstV1I	GCAGC	6 cut(s)	157, 385, 680, 1211, 1501, 1561
BstV2I	GAAGAC	2 cut(s)	773, 1375
BstX2I	RGATCY	7 cut(s)	207, 364, 407, 552, 1461, 1629, 1841
BstXI	CCANNNNNNTGG	1 cut(s)	58
BstYI	RGATCY	7 cut(s)	207, 364, 407, 552, 1461, 1629, 1841
Bsu15I	ATCGAT	1 cut(s)	825
BsuRI	GGCC	4 cut(s)	63, 80, 323, 843
BsuTUI	ATCGAT	1 cut(s)	825
BtgI	CCRYGG	3 cut(s)	261, 855, 1828
BtgZI	GCGATG	1 cut(s)	1467
BtrI	CACGTC	1 cut(s)	970
BtsCI	GGATG	2 cut(s)	651, 1162
BtsI	GCAGTG	1 cut(s)	1473
BtsIMutI	CAGTG	3 cut(s)	1017, 1473, 1676
BtuMI	TCGCGA	2 cut(s)	129, 638
BveI	ACCTGC	2 cut(s)	108, 1219
Cac8I	GCNNGC	8 cut(s)	40, 355, 378, 677, 810, 1204, 1716, 1849
CaiI	CAGNNNCTG	4 cut(s)	309, 745, 904, 1148
CciI	TCATGA	1 cut(s)	1386
CfoI	GCGC	9 cut(s)	40, 42, 359, 428, 476, 601, 788, 1215, 1567
Cfr10I	RCCGGY	1 cut(s)	1847
Cfr13I	GGNCC	3 cut(s)	61, 199, 859
Cfr42I	CCGCGG	3 cut(s)	264, 858, 1831
ClaI	ATCGAT	1 cut(s)	825
CseI	GACGC	5 cut(s)	331, 605, 778, 801, 926
Csp6I	GTAC	5 cut(s)	685, 1027, 1298, 1405, 1777
CviQI	GTAC	5 cut(s)	685, 1027, 1298, 1405, 1777
DdeI	CTNAG	3 cut(s)	6, 746, 1809
DinI	GGCGCC	3 cut(s)	358, 427, 1566
DraIII	CACNNNGTG	1 cut(s)	1498
DrdI	GACNNNNNNGTC	1 cut(s)	335
DriI	GACNNNNNGTC	1 cut(s)	331
DseDI	GACNNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	2 cut(s)	78, 321
Eam1104I	CTCTTC	3 cut(s)	12, 708, 750
Eam1105I	GACNNNNNGTC	1 cut(s)	331
EarI	CTCTTC	3 cut(s)	12, 708, 750
EciI	GGCGGA	4 cut(s)	241, 841, 1170, 1834
Ecl136II	GAGCTC	1 cut(s)	289
Eco130I	CCWWGG	2 cut(s)	411, 1266
Eco24I	GRGCYC	1 cut(s)	291
Eco31I	GGTCTC	1 cut(s)	1258
Eco47I	GGWCC	2 cut(s)	199, 859
Eco53kI	GAGCTC	1 cut(s)	289
Eco57I	CTGAAG	1 cut(s)	209
Eco72I	CACGTG	1 cut(s)	682
Eco88I	CYCGRG	4 cut(s)	176, 435, 447, 490
EcoICRI	GAGCTC	1 cut(s)	289
EcoNI	CCTNNNNNAGG	1 cut(s)	1226
EcoRI	GAATTC	1 cut(s)	1001
EcoRII	CCWGG	3 cut(s)	348, 708, 1147
EcoT14I	CCWWGG	2 cut(s)	411, 1266
EcoT38I	GRGCYC	1 cut(s)	291
EgeI	GGCGCC	3 cut(s)	358, 427, 1566
EheI	GGCGCC	3 cut(s)	358, 427, 1566
ErhI	CCWWGG	2 cut(s)	411, 1266
Esp3I	CGTCTC	1 cut(s)	1671
FaqI	GGGAC	4 cut(s)	418, 548, 1376, 1987
FauI	CCCGC	3 cut(s)	346, 649, 978
FbaI	TGATCA	1 cut(s)	1116
FblI	GTMKAC	1 cut(s)	815
FokI	GGATG	2 cut(s)	658, 1149
FriOI	GRGCYC	1 cut(s)	291
FspBI	CTAG	2 cut(s)	731, 1791
GlaI	GCGC	9 cut(s)	39, 41, 358, 427, 475, 600, 787, 1214, 1566
GsuI	CTGGAG	3 cut(s)	673, 1125, 1346
HaeII	RGCGCY	3 cut(s)	360, 429, 1568
HaeIII	GGCC	4 cut(s)	63, 80, 323, 843
HapII	CCGG	6 cut(s)	388, 697, 944, 1042, 1486, 1848
HgaI	GACGC	5 cut(s)	331, 605, 778, 801, 926
HhaI	GCGC	9 cut(s)	40, 42, 359, 428, 476, 601, 788, 1215, 1567
Hin1I	GRCGYC	6 cut(s)	342, 357, 426, 770, 1565, 1927
Hin6I	GCGC	9 cut(s)	38, 40, 357, 426, 474, 599, 786, 1213, 1565
HinP1I	GCGC	9 cut(s)	38, 40, 357, 426, 474, 599, 786, 1213, 1565
HincII	GTYRAC	1 cut(s)	816
HindII	GTYRAC	1 cut(s)	816
HpaII	CCGG	6 cut(s)	388, 697, 944, 1042, 1486, 1848
HphI	GGTGA	3 cut(s)	289, 473, 538
Hpy166II	GTNNAC	3 cut(s)	685, 816, 1884
Hpy8I	GTNNAC	3 cut(s)	685, 816, 1884
HpyAV	CCTTC	3 cut(s)	615, 1585, 1758
HpyCH4III	ACNGT	2 cut(s)	203, 1244
HpyCH4IV	ACGT	5 cut(s)	681, 781, 969, 1913, 1927
HpyF10VI	GCNNNNNNNGC	8 cut(s)	193, 260, 354, 736, 783, 1212, 1571, 1959
HpyF3I	CTNAG	3 cut(s)	6, 746, 1809
HpySE526I	ACGT	5 cut(s)	681, 781, 969, 1913, 1927
Hsp92I	GRCGYC	6 cut(s)	342, 357, 426, 770, 1565, 1927
HspAI	GCGC	9 cut(s)	38, 40, 357, 426, 474, 599, 786, 1213, 1565
KasI	GGCGCC	3 cut(s)	356, 425, 1564
Kpn2I	TCCGGA	1 cut(s)	1041
KroI	GCCGGC	1 cut(s)	1847
KroNI	GCCGGC	1 cut(s)	1849
Ksp22I	TGATCA	1 cut(s)	1116
KspI	CCGCGG	3 cut(s)	264, 858, 1831
LmnI	GCTCC	4 cut(s)	162, 946, 1318, 1967
Lsp1109I	GCAGC	6 cut(s)	157, 385, 680, 1211, 1501, 1561
LweI	GCATC	4 cut(s)	759, 840, 984, 1171
MaeI	CTAG	2 cut(s)	731, 1791
MaeII	ACGT	5 cut(s)	681, 781, 969, 1913, 1927
MaeIII	GTNAC	1 cut(s)	295
MfeI	CAATTG	1 cut(s)	1648
MflI	RGATCY	7 cut(s)	207, 364, 407, 552, 1461, 1629, 1841
MhlI	GDGCHC	2 cut(s)	291, 677
Mly113I	GGCGCC	3 cut(s)	357, 426, 1565
MmeI	TCCRAC	3 cut(s)	129, 168, 1086
MreI	CGCCGGCG	1 cut(s)	1847
MroI	TCCGGA	1 cut(s)	1041
MroNI	GCCGGC	1 cut(s)	1847
MroXI	GAANNNNTTC	1 cut(s)	759
MseI	TTAA	1 cut(s)	1782
MslI	CAYNNNNRTG	1 cut(s)	1097
MspA1I	CMGCKG	4 cut(s)	263, 693, 857, 1830
MspI	CCGG	6 cut(s)	388, 697, 944, 1042, 1486, 1848
MspR9I	CCNGG	3 cut(s)	350, 710, 1149
MunI	CAATTG	1 cut(s)	1648
MvaI	CCWGG	3 cut(s)	350, 710, 1149
MwoI	GCNNNNNNNGC	8 cut(s)	193, 260, 354, 736, 783, 1212, 1571, 1959
NaeI	GCCGGC	1 cut(s)	1849
NarI	GGCGCC	3 cut(s)	357, 426, 1565
NgoMIV	GCCGGC	1 cut(s)	1847
NlaIV	GGNNCC	7 cut(s)	358, 427, 613, 1463, 1566, 1843, 1963
NmeAIII	GCCGAG	3 cut(s)	385, 454, 908
NmuCI	GTSAC	1 cut(s)	295
NruI	TCGCGA	2 cut(s)	129, 638
PaeR7I	CTCGAG	1 cut(s)	176
PagI	TCATGA	1 cut(s)	1386
PalAI	GGCGCGCC	1 cut(s)	38
PauI	GCGCGC	1 cut(s)	38
PcsI	WCGNNNNNNNCGW	5 cut(s)	291, 333, 473, 579, 972
PdiI	GCCGGC	1 cut(s)	1849
PdmI	GAANNNNTTC	1 cut(s)	759
PfeI	GAWTC	5 cut(s)	257, 794, 895, 961, 1111
PflMI	CCANNNNNTGG	1 cut(s)	1148
PfoI	TCCNGGA	1 cut(s)	708
Ple19I	CGATCG	7 cut(s)	282, 573, 829, 930, 941, 1211, 1934
PluTI	GGCGCC	3 cut(s)	360, 429, 1568
PmaCI	CACGTG	1 cut(s)	682
PmlI	CACGTG	1 cut(s)	682
Ppu21I	YACGTR	1 cut(s)	682
Psp124BI	GAGCTC	1 cut(s)	291
Psp6I	CCWGG	3 cut(s)	348, 708, 1147
PspCI	CACGTG	1 cut(s)	682
PspGI	CCWGG	3 cut(s)	348, 708, 1147
PspN4I	GGNNCC	7 cut(s)	358, 427, 613, 1463, 1566, 1843, 1963
PspPI	GGNCC	3 cut(s)	61, 199, 859
PstNI	CAGNNNCTG	4 cut(s)	309, 745, 904, 1148
PsuI	RGATCY	7 cut(s)	207, 364, 407, 552, 1461, 1629, 1841
PteI	GCGCGC	1 cut(s)	38
PvuI	CGATCG	7 cut(s)	282, 573, 829, 930, 941, 1211, 1934
PvuII	CAGCTG	1 cut(s)	693
RruI	TCGCGA	2 cut(s)	129, 638
RsaI	GTAC	5 cut(s)	686, 1028, 1299, 1406, 1778
RsaNI	GTAC	5 cut(s)	685, 1027, 1298, 1405, 1777
RseI	CAYNNNNRTG	1 cut(s)	1097
SacI	GAGCTC	1 cut(s)	291
SacII	CCGCGG	3 cut(s)	264, 858, 1831
SalI	GTCGAC	1 cut(s)	814
SaqAI	TTAA	1 cut(s)	1782
Sau96I	GGNCC	3 cut(s)	61, 199, 859
ScaI	AGTACT	1 cut(s)	1028
ScrFI	CCNGG	3 cut(s)	350, 710, 1149
SduI	GDGCHC	2 cut(s)	291, 677
SfaNI	GCATC	4 cut(s)	759, 840, 984, 1171
SfoI	GGCGCC	3 cut(s)	358, 427, 1566
Sfr274I	CTCGAG	1 cut(s)	176
Sfr303I	CCGCGG	3 cut(s)	264, 858, 1831
SgrAI	CRCCGGYG	1 cut(s)	1847
SgrBI	CCGCGG	3 cut(s)	264, 858, 1831
SgsI	GGCGCGCC	1 cut(s)	38
SinI	GGWCC	2 cut(s)	199, 859
SlaI	CTCGAG	1 cut(s)	176
SmiMI	CAYNNNNRTG	1 cut(s)	1097
SmlI	CTYRAG	4 cut(s)	176, 392, 1223, 1601
SmoI	CTYRAG	4 cut(s)	176, 392, 1223, 1601
SspDI	GGCGCC	3 cut(s)	356, 425, 1564
SspMI	CTAG	2 cut(s)	731, 1791
SstI	GAGCTC	1 cut(s)	291
StyD4I	CCNGG	3 cut(s)	348, 708, 1147
StyI	CCWWGG	2 cut(s)	411, 1266
TaaI	ACNGT	2 cut(s)	203, 1244
TaiI	ACGT	5 cut(s)	684, 784, 972, 1916, 1930
TatI	WGTACW	3 cut(s)	684, 1026, 1776
TauI	GCSGC	7 cut(s)	266, 426, 656, 857, 1155, 1557, 1833
TfiI	GAWTC	5 cut(s)	257, 794, 895, 961, 1111
Tru1I	TTAA	1 cut(s)	1782
Tru9I	TTAA	1 cut(s)	1782
TscAI	CASTG	3 cut(s)	1017, 1480, 1676
TseFI	GTSAC	1 cut(s)	295
TseI	GCWGC	6 cut(s)	170, 373, 693, 1199, 1489, 1574
Tsp45I	GTSAC	1 cut(s)	295
TspDTI	ATGAA	9 cut(s)	516, 859, 1087, 1199, 1375, 1406, 1604, 1720, 1917
TspGWI	ACGGA	1 cut(s)	325
TspRI	CASTG	3 cut(s)	1017, 1480, 1676
Van91I	CCANNNNNTGG	1 cut(s)	1148
VpaK11BI	GGWCC	2 cut(s)	199, 859
XagI	CCTNNNNNAGG	1 cut(s)	1226
XapI	RAATTY	3 cut(s)	907, 1001, 1689
XhoI	CTCGAG	1 cut(s)	176
XmiI	GTMKAC	1 cut(s)	815
XmnI	GAANNNNTTC	1 cut(s)	759
XspI	CTAG	2 cut(s)	731, 1791
ZraI	GACGTC	1 cut(s)	1928
ZrmI	AGTACT	1 cut(s)	1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.