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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G58430 |
| fragaria_vesca | FvH4_3g39790 |
| malus_domestica | MD03G1056800.v1.1 |
| prunus_persica | Prupe.6G048000_v2.0.a1 |
| pyrus_communis | pycom03g04520 pycom11g04860 |
| rosa_chinensis | RchiOBHm_Chr5g0004641 RchiOBHm_Chr5g0071681 |
| rosa_laevigata | RLG00000002358 RLG00000008736 RLG00000018357 RLG00000026108 RLG00000029385 RLG00000036239 |
| rosa_multiflora | Rmu_sc0002255.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00005050 Rroxscaffold_1G00009490 Rroxscaffold_4G00312970 |
| rosa_rugosa | Rorug05G0399200 Rorug06G0105500 |
| rosa_samantha | Rh1BG001700 Rh1DG215500 Rh2CG371300 Rh5AG470200 Rh5BG236300 Rh5BG489700 Rh5BG566000 Rh5CG513500 Rh5CG588000 Rh5DG500500 Rh6AG501300 Rh6BG021300 Rh6BG467900 Rh7AG147100 Rh7BG007900 Rh7CG151300 |
| rosa_wichuraiana | Rw5G036600 Rw5G043690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 176 |
| AclWI | GGATC | 1 cut(s) | 80 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| Alw21I | GWGCWC | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 80 |
| Ama87I | CYCGRG | 1 cut(s) | 27 |
| ApeKI | GCWGC | 1 cut(s) | 98 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| AsuC2I | CCSGG | 1 cut(s) | 296 |
| AsuHPI | GGTGA | 2 cut(s) | 220, 272 |
| AvaI | CYCGRG | 1 cut(s) | 27 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BbsI | GAAGAC | 2 cut(s) | 44, 53 |
| Bbv12I | GWGCWC | 1 cut(s) | 82 |
| BbvI | GCAGC | 1 cut(s) | 110 |
| BccI | CCATC | 2 cut(s) | 156, 173 |
| BceAI | ACGGC | 2 cut(s) | 86, 275 |
| BcnI | CCSGG | 1 cut(s) | 296 |
| BisI | GCNGC | 1 cut(s) | 99 |
| BlsI | GCNGC | 1 cut(s) | 100 |
| Bme1390I | CCNGG | 1 cut(s) | 296 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmeT110I | CYCGRG | 1 cut(s) | 27 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 146 |
| BmrFI | CCNGG | 1 cut(s) | 296 |
| BoxI | GACNNNNGTC | 1 cut(s) | 249 |
| BpiI | GAAGAC | 2 cut(s) | 44, 53 |
| BpuMI | CCSGG | 1 cut(s) | 296 |
| Bse1I | ACTGG | 1 cut(s) | 269 |
| BseGI | GGATG | 3 cut(s) | 184, 239, 304 |
| BseNI | ACTGG | 1 cut(s) | 269 |
| BseRI | GAGGAG | 3 cut(s) | 67, 70, 90 |
| BseXI | GCAGC | 1 cut(s) | 110 |
| BsiHKAI | GWGCWC | 1 cut(s) | 82 |
| BsiHKCI | CYCGRG | 1 cut(s) | 27 |
| BsiSI | CCGG | 1 cut(s) | 295 |
| BslFI | GGGAC | 1 cut(s) | 158 |
| BsmFI | GGGAC | 1 cut(s) | 158 |
| BsoBI | CYCGRG | 1 cut(s) | 27 |
| Bsp1286I | GDGCHC | 1 cut(s) | 82 |
| Bsp143I | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| BspACI | CCGC | 1 cut(s) | 176 |
| BspLI | GGNNCC | 1 cut(s) | 146 |
| BspPI | GGATC | 1 cut(s) | 80 |
| BsrI | ACTGG | 1 cut(s) | 269 |
| BssMI | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| Bst4CI | ACNGT | 1 cut(s) | 139 |
| BstF5I | GGATG | 3 cut(s) | 184, 239, 304 |
| BstKTI | GATC | 6 cut(s) | 64, 88, 106, 158, 169, 190 |
| BstMBI | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 249 |
| BstSCI | CCNGG | 1 cut(s) | 294 |
| BstV1I | GCAGC | 1 cut(s) | 110 |
| BstV2I | GAAGAC | 2 cut(s) | 44, 53 |
| BstX2I | RGATCY | 1 cut(s) | 85 |
| BstYI | RGATCY | 1 cut(s) | 85 |
| BtsCI | GGATG | 3 cut(s) | 184, 239, 304 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| CseI | GACGC | 1 cut(s) | 104 |
| CviJI | RGCY | 4 cut(s) | 34, 101, 229, 290 |
| CviKI_1 | RGCY | 4 cut(s) | 34, 101, 229, 290 |
| DpnI | GATC | 6 cut(s) | 63, 87, 105, 157, 168, 189 |
| DpnII | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 27 |
| FaiI | YATR | 2 cut(s) | 235, 277 |
| FaqI | GGGAC | 1 cut(s) | 158 |
| Fnu4HI | GCNGC | 1 cut(s) | 99 |
| FokI | GGATG | 3 cut(s) | 191, 226, 311 |
| Fsp4HI | GCNGC | 1 cut(s) | 99 |
| GluI | GCNGC | 1 cut(s) | 99 |
| HapII | CCGG | 1 cut(s) | 295 |
| HgaI | GACGC | 1 cut(s) | 104 |
| HinfI | GANTC | 1 cut(s) | 25 |
| HpaII | CCGG | 1 cut(s) | 295 |
| HphI | GGTGA | 2 cut(s) | 220, 272 |
| Hpy188I | TCNGA | 1 cut(s) | 244 |
| Hpy188III | TCNNGA | 1 cut(s) | 170 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 72, 98 |
| HpyCH4III | ACNGT | 1 cut(s) | 139 |
| HpyCH4V | TGCA | 1 cut(s) | 193 |
| Kzo9I | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| LmnI | GCTCC | 1 cut(s) | 77 |
| LpnPI | CCDG | 5 cut(s) | 96, 127, 245, 250, 308 |
| Lsp1109I | GCAGC | 1 cut(s) | 110 |
| MaeIII | GTNAC | 3 cut(s) | 4, 208, 278 |
| MalI | GATC | 6 cut(s) | 63, 87, 105, 157, 168, 189 |
| MboI | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| MboII | GAAGA | 5 cut(s) | 49, 58, 150, 228, 231 |
| MflI | RGATCY | 1 cut(s) | 85 |
| MhlI | GDGCHC | 1 cut(s) | 82 |
| MlyI | GAGTC | 1 cut(s) | 19 |
| MmeI | TCCRAC | 1 cut(s) | 267 |
| MnlI | CCTC | 4 cut(s) | 45, 48, 68, 192 |
| MspI | CCGG | 1 cut(s) | 295 |
| MspR9I | CCNGG | 1 cut(s) | 296 |
| NciI | CCSGG | 1 cut(s) | 296 |
| NdeII | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| NlaIV | GGNNCC | 1 cut(s) | 146 |
| NmuCI | GTSAC | 2 cut(s) | 208, 278 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 47, 70, 99 |
| PflFI | GACNNNGTC | 1 cut(s) | 120 |
| PfoI | TCCNGGA | 1 cut(s) | 294 |
| PkrI | GCNGC | 1 cut(s) | 100 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| PshAI | GACNNNNGTC | 1 cut(s) | 249 |
| PspN4I | GGNNCC | 1 cut(s) | 146 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| PsuI | RGATCY | 1 cut(s) | 85 |
| PsyI | GACNNNGTC | 1 cut(s) | 120 |
| SatI | GCNGC | 1 cut(s) | 99 |
| Sau3AI | GATC | 6 cut(s) | 61, 85, 103, 155, 166, 187 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| SchI | GAGTC | 1 cut(s) | 19 |
| ScrFI | CCNGG | 1 cut(s) | 296 |
| SduI | GDGCHC | 1 cut(s) | 82 |
| SinI | GGWCC | 1 cut(s) | 145 |
| SsiI | CCGC | 1 cut(s) | 176 |
| StyD4I | CCNGG | 1 cut(s) | 294 |
| TaaI | ACNGT | 1 cut(s) | 139 |
| TaqI | TCGA | 1 cut(s) | 127 |
| TseFI | GTSAC | 2 cut(s) | 208, 278 |
| TseI | GCWGC | 1 cut(s) | 98 |
| Tsp45I | GTSAC | 2 cut(s) | 208, 278 |
| Tth111I | GACNNNGTC | 1 cut(s) | 120 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |