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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59960 AT5G59960 AT5G59960 |
| fragaria_vesca | FvH4_3g35470 FvH4_3g35470 |
| malus_domestica | MD03G1097100.v1.1 MD11G1143700.v1.1 |
| prunus_persica | Prupe.4G098100_v2.0.a1 Prupe.6G081500_v2.0.a1 Prupe.6G081500_v2.0.a1 Prupe.6G081500_v2.0.a1 |
| pyrus_communis | pycom03g08010 pycom11g09330 |
| rosa_chinensis | RchiOBHm_Chr1g0369801 RchiOBHm_Chr5g0063631 |
| rosa_laevigata | RLG00000029314 RLG00000035658 |
| rosa_multiflora | Rmu_sc0000368.1_g000040 Rmu_ssc0000309.1_g000060 |
| rosa_roxburghii | Rroxscaffold_1G00017170 Rroxscaffold_2G00129250 |
| rosa_rugosa | Rorug05G0358400 Rorug05G0358500 Rorug05G0358500 Rorug05G0358600 |
| rosa_samantha | Rh2CG479400 Rh3DG316400 Rh5AG417200 Rh5BG432800 Rh5CG456000 Rh5DG446200 Rh6CG100700 |
| rosa_wichuraiana | Rw3G025090 Rw5G039210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 268 |
| AccII | CGCG | 1 cut(s) | 47 |
| AciI | CCGC | 3 cut(s) | 79, 103, 106 |
| AcsI | RAATTY | 2 cut(s) | 109, 515 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfaI | GTAC | 1 cut(s) | 396 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 278 |
| AgsI | TTSAA | 5 cut(s) | 221, 377, 425, 507, 514 |
| AluBI | AGCT | 5 cut(s) | 11, 30, 73, 140, 229 |
| AluI | AGCT | 5 cut(s) | 11, 30, 73, 140, 229 |
| Alw21I | GWGCWC | 1 cut(s) | 249 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| ApeKI | GCWGC | 1 cut(s) | 100 |
| ApoI | RAATTY | 2 cut(s) | 109, 515 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 171, 396 |
| AspLEI | GCGC | 2 cut(s) | 49, 85 |
| BanI | GGYRCC | 1 cut(s) | 268 |
| BanII | GRGCYC | 1 cut(s) | 502 |
| Bbv12I | GWGCWC | 1 cut(s) | 249 |
| BbvCI | CCTCAGC | 1 cut(s) | 207 |
| BbvI | GCAGC | 1 cut(s) | 112 |
| BccI | CCATC | 1 cut(s) | 206 |
| BclI | TGATCA | 1 cut(s) | 253 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfoI | RGCGCY | 1 cut(s) | 86 |
| BisI | GCNGC | 2 cut(s) | 101, 104 |
| BlsI | GCNGC | 2 cut(s) | 102, 105 |
| BmcAI | AGTACT | 1 cut(s) | 396 |
| BmiI | GGNNCC | 2 cut(s) | 270, 317 |
| BmsI | GCATC | 3 cut(s) | 181, 297, 338 |
| BpmI | CTGGAG | 1 cut(s) | 59 |
| Bpu10I | CCTNAGC | 1 cut(s) | 207 |
| Bsa29I | ATCGAT | 1 cut(s) | 150 |
| BsaBI | GATNNNNATC | 1 cut(s) | 478 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 278 |
| Bse1I | ACTGG | 1 cut(s) | 319 |
| Bse8I | GATNNNNATC | 1 cut(s) | 478 |
| BseCI | ATCGAT | 1 cut(s) | 150 |
| BseGI | GGATG | 3 cut(s) | 196, 217, 288 |
| BseJI | GATNNNNATC | 1 cut(s) | 478 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 278 |
| BseMII | CTCAG | 3 cut(s) | 190, 198, 264 |
| BseNI | ACTGG | 1 cut(s) | 319 |
| BseXI | GCAGC | 1 cut(s) | 112 |
| Bsh1236I | CGCG | 1 cut(s) | 47 |
| BshNI | GGYRCC | 1 cut(s) | 268 |
| BshVI | ATCGAT | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 249 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 278 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 2 cut(s) | 249, 502 |
| Bsp143I | GATC | 3 cut(s) | 60, 147, 253 |
| BspACI | CCGC | 3 cut(s) | 79, 103, 106 |
| BspCNI | CTCAG | 3 cut(s) | 189, 199, 265 |
| BspDI | ATCGAT | 1 cut(s) | 150 |
| BspFNI | CGCG | 1 cut(s) | 47 |
| BspLI | GGNNCC | 2 cut(s) | 270, 317 |
| BspT107I | GGYRCC | 1 cut(s) | 268 |
| BsrI | ACTGG | 1 cut(s) | 319 |
| BssMI | GATC | 3 cut(s) | 60, 147, 253 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstC8I | GCNNGC | 3 cut(s) | 81, 87, 159 |
| BstDEI | CTNAG | 3 cut(s) | 176, 207, 273 |
| BstF5I | GGATG | 3 cut(s) | 196, 217, 288 |
| BstFNI | CGCG | 1 cut(s) | 47 |
| BstH2I | RGCGCY | 1 cut(s) | 86 |
| BstHHI | GCGC | 2 cut(s) | 49, 85 |
| BstKTI | GATC | 3 cut(s) | 63, 150, 256 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMBI | GATC | 3 cut(s) | 60, 147, 253 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 137 |
| BstUI | CGCG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 112 |
| Bsu15I | ATCGAT | 1 cut(s) | 150 |
| BsuTUI | ATCGAT | 1 cut(s) | 150 |
| BtsCI | GGATG | 3 cut(s) | 196, 217, 288 |
| BtsIMutI | CAGTG | 1 cut(s) | 249 |
| Cac8I | GCNNGC | 3 cut(s) | 81, 87, 159 |
| CfoI | GCGC | 2 cut(s) | 49, 85 |
| ClaI | ATCGAT | 1 cut(s) | 150 |
| CseI | GACGC | 2 cut(s) | 53, 61 |
| Csp6I | GTAC | 1 cut(s) | 395 |
| CviQI | GTAC | 1 cut(s) | 395 |
| DdeI | CTNAG | 3 cut(s) | 176, 207, 273 |
| DpnI | GATC | 3 cut(s) | 62, 149, 255 |
| DpnII | GATC | 3 cut(s) | 60, 147, 253 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| EciI | GGCGGA | 1 cut(s) | 121 |
| Eco24I | GRGCYC | 1 cut(s) | 502 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| EcoT38I | GRGCYC | 1 cut(s) | 502 |
| FaiI | YATR | 8 cut(s) | 37, 137, 240, 261, 336, 521, 523, 544 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 384, 416 |
| FauI | CCCGC | 1 cut(s) | 72 |
| FbaI | TGATCA | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 2 cut(s) | 101, 104 |
| FokI | GGATG | 3 cut(s) | 203, 224, 275 |
| FriOI | GRGCYC | 1 cut(s) | 502 |
| Fsp4HI | GCNGC | 2 cut(s) | 101, 104 |
| GlaI | GCGC | 2 cut(s) | 48, 84 |
| GluI | GCNGC | 2 cut(s) | 101, 104 |
| GsuI | CTGGAG | 1 cut(s) | 59 |
| HaeII | RGCGCY | 1 cut(s) | 86 |
| HgaI | GACGC | 2 cut(s) | 53, 61 |
| HhaI | GCGC | 2 cut(s) | 49, 85 |
| Hin6I | GCGC | 2 cut(s) | 47, 83 |
| HinP1I | GCGC | 2 cut(s) | 47, 83 |
| HindIII | AAGCTT | 1 cut(s) | 9 |
| HinfI | GANTC | 2 cut(s) | 172, 474 |
| Hpy188I | TCNGA | 1 cut(s) | 391 |
| Hpy188III | TCNNGA | 3 cut(s) | 41, 64, 445 |
| Hpy99I | CGWCG | 2 cut(s) | 47, 100 |
| HpyAV | CCTTC | 2 cut(s) | 215, 419 |
| HpyCH4V | TGCA | 6 cut(s) | 35, 118, 194, 329, 431, 467 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 137 |
| HpyF3I | CTNAG | 3 cut(s) | 176, 207, 273 |
| HspAI | GCGC | 2 cut(s) | 47, 83 |
| Ksp22I | TGATCA | 1 cut(s) | 253 |
| Kzo9I | GATC | 3 cut(s) | 60, 147, 253 |
| LmnI | GCTCC | 2 cut(s) | 78, 315 |
| LpnPI | CCDG | 8 cut(s) | 71, 89, 104, 166, 216, 285, 332, 430 |
| Lsp1109I | GCAGC | 1 cut(s) | 112 |
| LweI | GCATC | 3 cut(s) | 181, 297, 338 |
| MaeIII | GTNAC | 1 cut(s) | 404 |
| MalI | GATC | 3 cut(s) | 62, 149, 255 |
| MboI | GATC | 3 cut(s) | 60, 147, 253 |
| MboII | GAAGA | 4 cut(s) | 6, 79, 197, 392 |
| MhlI | GDGCHC | 2 cut(s) | 249, 502 |
| MluCI | AATT | 3 cut(s) | 109, 195, 515 |
| MmeI | TCCRAC | 2 cut(s) | 331, 512 |
| MnlI | CCTC | 5 cut(s) | 28, 33, 181, 202, 364 |
| MroXI | GAANNNNTTC | 2 cut(s) | 171, 396 |
| MspA1I | CMGCKG | 3 cut(s) | 79, 103, 229 |
| MvnI | CGCG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 137 |
| NdeII | GATC | 3 cut(s) | 60, 147, 253 |
| NlaIV | GGNNCC | 2 cut(s) | 270, 317 |
| PdmI | GAANNNNTTC | 2 cut(s) | 171, 396 |
| PfeI | GAWTC | 2 cut(s) | 172, 474 |
| PkrI | GCNGC | 2 cut(s) | 102, 105 |
| PspN4I | GGNNCC | 2 cut(s) | 270, 317 |
| PvuII | CAGCTG | 1 cut(s) | 229 |
| RsaI | GTAC | 1 cut(s) | 396 |
| RsaNI | GTAC | 1 cut(s) | 395 |
| SatI | GCNGC | 2 cut(s) | 101, 104 |
| Sau3AI | GATC | 3 cut(s) | 60, 147, 253 |
| ScaI | AGTACT | 1 cut(s) | 396 |
| SduI | GDGCHC | 2 cut(s) | 249, 502 |
| SetI | ASST | 8 cut(s) | 13, 32, 75, 142, 226, 231, 375, 430 |
| SfaNI | GCATC | 3 cut(s) | 181, 297, 338 |
| SmlI | CTYRAG | 1 cut(s) | 6 |
| SmoI | CTYRAG | 1 cut(s) | 6 |
| Sse9I | AATT | 3 cut(s) | 109, 195, 515 |
| SsiI | CCGC | 3 cut(s) | 79, 103, 106 |
| TaqI | TCGA | 4 cut(s) | 25, 42, 63, 150 |
| TasI | AATT | 3 cut(s) | 109, 195, 515 |
| TatI | WGTACW | 1 cut(s) | 394 |
| TauI | GCSGC | 1 cut(s) | 106 |
| TfiI | GAWTC | 2 cut(s) | 172, 474 |
| TscAI | CASTG | 1 cut(s) | 256 |
| TseI | GCWGC | 1 cut(s) | 100 |
| TspGWI | ACGGA | 1 cut(s) | 84 |
| TspRI | CASTG | 1 cut(s) | 256 |
| XapI | RAATTY | 2 cut(s) | 109, 515 |
| XmnI | GAANNNNTTC | 2 cut(s) | 171, 396 |
| ZrmI | AGTACT | 1 cut(s) | 396 |