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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59960 AT5G59960 AT5G59960 |
| fragaria_vesca | FvH4_3g35470 FvH4_3g35470 |
| malus_domestica | MD03G1097100.v1.1 MD11G1143700.v1.1 |
| prunus_persica | Prupe.4G098100_v2.0.a1 Prupe.6G081500_v2.0.a1 Prupe.6G081500_v2.0.a1 Prupe.6G081500_v2.0.a1 |
| pyrus_communis | pycom03g08010 pycom11g09330 |
| rosa_chinensis | RchiOBHm_Chr1g0369801 RchiOBHm_Chr5g0063631 |
| rosa_laevigata | RLG00000029314 RLG00000035658 |
| rosa_multiflora | Rmu_sc0000368.1_g000040 Rmu_ssc0000309.1_g000060 |
| rosa_roxburghii | Rroxscaffold_1G00017170 Rroxscaffold_2G00129250 |
| rosa_rugosa | Rorug05G0358400 Rorug05G0358500 Rorug05G0358500 Rorug05G0358600 |
| rosa_samantha | Rh2CG479400 Rh3DG316400 Rh5AG417200 Rh5BG432800 Rh5CG456000 Rh5DG446200 Rh6CG100700 |
| rosa_wichuraiana | Rw3G025090 Rw5G039210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 657 |
| Acc65I | GGTACC | 1 cut(s) | 1994 |
| AccB1I | GGYRCC | 1 cut(s) | 1994 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 716 |
| AccI | GTMKAC | 2 cut(s) | 697, 1316 |
| AccII | CGCG | 1 cut(s) | 26 |
| AciI | CCGC | 3 cut(s) | 1087, 1675, 1869 |
| AclWI | GGATC | 1 cut(s) | 928 |
| AcsI | RAATTY | 6 cut(s) | 245, 378, 1045, 1454, 1780, 2067 |
| AcuI | CTGAAG | 2 cut(s) | 1449, 1821 |
| AcyI | GRCGYC | 1 cut(s) | 654 |
| AfaI | GTAC | 4 cut(s) | 1117, 1679, 1996, 2017 |
| AfeI | AGCGCT | 1 cut(s) | 1990 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 716, 792 |
| AjnI | CCWGG | 2 cut(s) | 1890, 2061 |
| AluBI | AGCT | 9 cut(s) | 35, 341, 515, 758, 890, 1328, 1604, 1850, 2122 |
| AluI | AGCT | 9 cut(s) | 35, 341, 515, 758, 890, 1328, 1604, 1850, 2122 |
| Alw26I | GTCTC | 2 cut(s) | 260, 797 |
| AlwI | GGATC | 1 cut(s) | 928 |
| Ama87I | CYCGRG | 2 cut(s) | 1007, 1437 |
| Aor51HI | AGCGCT | 1 cut(s) | 1990 |
| ApeKI | GCWGC | 4 cut(s) | 755, 863, 1721, 2119 |
| ApoI | RAATTY | 6 cut(s) | 245, 378, 1045, 1454, 1780, 2067 |
| AseI | ATTAAT | 2 cut(s) | 321, 1235 |
| Asp718I | GGTACC | 1 cut(s) | 1994 |
| AspLEI | GCGC | 2 cut(s) | 26, 1991 |
| AspS9I | GGNCC | 1 cut(s) | 1634 |
| AsuHPI | GGTGA | 3 cut(s) | 499, 1376, 1837 |
| AvaI | CYCGRG | 2 cut(s) | 1007, 1437 |
| AvaII | GGWCC | 1 cut(s) | 1634 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 1986, 1986, 2007, 2019, 2019, 2040 |
| BanI | GGYRCC | 1 cut(s) | 1994 |
| BbvI | GCAGC | 3 cut(s) | 767, 875, 1708 |
| BccI | CCATC | 3 cut(s) | 487, 1584, 1772 |
| BceAI | ACGGC | 1 cut(s) | 1506 |
| BciT130I | CCWGG | 2 cut(s) | 1892, 2063 |
| BclI | TGATCA | 1 cut(s) | 594 |
| BcoDI | GTCTC | 2 cut(s) | 260, 797 |
| BfaI | CTAG | 2 cut(s) | 873, 1167 |
| BfmI | CTRYAG | 3 cut(s) | 861, 1101, 1722 |
| BfoI | RGCGCY | 1 cut(s) | 1992 |
| BisI | GCNGC | 6 cut(s) | 756, 864, 1088, 1722, 1869, 2120 |
| BlsI | GCNGC | 6 cut(s) | 757, 865, 1089, 1723, 1870, 2121 |
| Bme1390I | CCNGG | 2 cut(s) | 1892, 2063 |
| Bme18I | GGWCC | 1 cut(s) | 1634 |
| BmeT110I | CYCGRG | 2 cut(s) | 1007, 1437 |
| BmgT120I | GGNCC | 1 cut(s) | 1634 |
| BmiI | GGNNCC | 1 cut(s) | 1996 |
| BmrFI | CCNGG | 2 cut(s) | 1892, 2063 |
| BmsI | GCATC | 7 cut(s) | 352, 496, 1245, 1450, 1626, 1721, 1807 |
| BpmI | CTGGAG | 2 cut(s) | 531, 2045 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1605 |
| BpuEI | CTTGAG | 2 cut(s) | 1640, 1956 |
| Bsa29I | ATCGAT | 1 cut(s) | 1588 |
| BsaHI | GRCGYC | 1 cut(s) | 654 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 716, 792 |
| Bse1I | ACTGG | 1 cut(s) | 188 |
| Bse3DI | GCAATG | 2 cut(s) | 873, 1536 |
| BseBI | CCWGG | 2 cut(s) | 1892, 2063 |
| BseCI | ATCGAT | 1 cut(s) | 1588 |
| BseGI | GGATG | 3 cut(s) | 592, 976, 1712 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 716, 792 |
| BseMI | GCAATG | 2 cut(s) | 873, 1536 |
| BseMII | CTCAG | 2 cut(s) | 357, 1386 |
| BseNI | ACTGG | 1 cut(s) | 188 |
| BseRI | GAGGAG | 1 cut(s) | 1322 |
| BseXI | GCAGC | 3 cut(s) | 767, 875, 1708 |
| BseYI | CCCAGC | 1 cut(s) | 2122 |
| BsgI | GTGCAG | 1 cut(s) | 774 |
| Bsh1236I | CGCG | 1 cut(s) | 26 |
| BshNI | GGYRCC | 1 cut(s) | 1994 |
| BshVI | ATCGAT | 1 cut(s) | 1588 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1007, 1437 |
| BslFI | GGGAC | 2 cut(s) | 438, 665 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 716, 792 |
| BsmAI | GTCTC | 2 cut(s) | 260, 797 |
| BsmFI | GGGAC | 2 cut(s) | 438, 665 |
| BsoBI | CYCGRG | 2 cut(s) | 1007, 1437 |
| Bsp143I | GATC | 3 cut(s) | 594, 920, 1216 |
| BspACI | CCGC | 3 cut(s) | 1087, 1675, 1869 |
| BspCNI | CTCAG | 2 cut(s) | 358, 1387 |
| BspDI | ATCGAT | 1 cut(s) | 1588 |
| BspFNI | CGCG | 1 cut(s) | 26 |
| BspHI | TCATGA | 2 cut(s) | 280, 937 |
| BspLI | GGNNCC | 1 cut(s) | 1996 |
| BspMAI | CTGCAG | 3 cut(s) | 865, 1105, 1726 |
| BspPI | GGATC | 1 cut(s) | 928 |
| BspT107I | GGYRCC | 1 cut(s) | 1994 |
| BsrDI | GCAATG | 2 cut(s) | 873, 1536 |
| BsrI | ACTGG | 1 cut(s) | 188 |
| BssMI | GATC | 3 cut(s) | 594, 920, 1216 |
| BssNAI | GTATAC | 1 cut(s) | 1317 |
| BssNI | GRCGYC | 1 cut(s) | 654 |
| Bst1107I | GTATAC | 1 cut(s) | 1317 |
| Bst2UI | CCWGG | 2 cut(s) | 1892, 2063 |
| Bst4CI | ACNGT | 3 cut(s) | 397, 742, 930 |
| Bst6I | CTCTTC | 2 cut(s) | 83, 1343 |
| BstACI | GRCGYC | 1 cut(s) | 654 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1718 |
| BstC8I | GCNNGC | 1 cut(s) | 1922 |
| BstDEI | CTNAG | 5 cut(s) | 366, 812, 1395, 1605, 1985 |
| BstEII | GGTNACC | 1 cut(s) | 143 |
| BstF5I | GGATG | 3 cut(s) | 592, 976, 1712 |
| BstFNI | CGCG | 1 cut(s) | 26 |
| BstH2I | RGCGCY | 1 cut(s) | 1992 |
| BstHHI | GCGC | 2 cut(s) | 26, 1991 |
| BstKTI | GATC | 3 cut(s) | 597, 923, 1219 |
| BstMAI | GTCTC | 2 cut(s) | 260, 797 |
| BstMBI | GATC | 3 cut(s) | 594, 920, 1216 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 32, 362, 869, 1718, 1856, 1865 |
| BstNI | CCWGG | 2 cut(s) | 1892, 2063 |
| BstNSI | RCATGY | 2 cut(s) | 356, 1304 |
| BstPI | GGTNACC | 1 cut(s) | 143 |
| BstSCI | CCNGG | 2 cut(s) | 1890, 2061 |
| BstSFI | CTRYAG | 3 cut(s) | 861, 1101, 1722 |
| BstUI | CGCG | 1 cut(s) | 26 |
| BstV1I | GCAGC | 3 cut(s) | 767, 875, 1708 |
| BstZ17I | GTATAC | 1 cut(s) | 1317 |
| Bsu15I | ATCGAT | 1 cut(s) | 1588 |
| BsuTUI | ATCGAT | 1 cut(s) | 1588 |
| BtgZI | GCGATG | 1 cut(s) | 833 |
| BtsCI | GGATG | 3 cut(s) | 592, 976, 1712 |
| BtsIMutI | CAGTG | 1 cut(s) | 747 |
| Cac8I | GCNNGC | 1 cut(s) | 1922 |
| CciI | TCATGA | 2 cut(s) | 280, 937 |
| CfoI | GCGC | 2 cut(s) | 26, 1991 |
| Cfr13I | GGNCC | 1 cut(s) | 1634 |
| ClaI | ATCGAT | 1 cut(s) | 1588 |
| Csp6I | GTAC | 4 cut(s) | 1116, 1678, 1995, 2016 |
| CviQI | GTAC | 4 cut(s) | 1116, 1678, 1995, 2016 |
| DdeI | CTNAG | 5 cut(s) | 366, 812, 1395, 1605, 1985 |
| DpnI | GATC | 3 cut(s) | 596, 922, 1218 |
| DpnII | GATC | 3 cut(s) | 594, 920, 1216 |
| Eam1104I | CTCTTC | 2 cut(s) | 83, 1343 |
| EarI | CTCTTC | 2 cut(s) | 83, 1343 |
| Eco47I | GGWCC | 1 cut(s) | 1634 |
| Eco47III | AGCGCT | 1 cut(s) | 1990 |
| Eco57I | CTGAAG | 2 cut(s) | 1449, 1821 |
| Eco88I | CYCGRG | 2 cut(s) | 1007, 1437 |
| Eco91I | GGTNACC | 1 cut(s) | 143 |
| EcoO65I | GGTNACC | 1 cut(s) | 143 |
| EcoRII | CCWGG | 2 cut(s) | 1890, 2061 |
| EcoT22I | ATGCAT | 1 cut(s) | 1822 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1606, 1638, 2011, 2043 |
| FaqI | GGGAC | 2 cut(s) | 438, 665 |
| FauNDI | CATATG | 2 cut(s) | 216, 309 |
| FbaI | TGATCA | 1 cut(s) | 594 |
| FblI | GTMKAC | 2 cut(s) | 697, 1316 |
| Fnu4HI | GCNGC | 6 cut(s) | 756, 864, 1088, 1722, 1869, 2120 |
| FokI | GGATG | 3 cut(s) | 599, 983, 1699 |
| Fsp4HI | GCNGC | 6 cut(s) | 756, 864, 1088, 1722, 1869, 2120 |
| FspBI | CTAG | 2 cut(s) | 873, 1167 |
| GlaI | GCGC | 2 cut(s) | 25, 1990 |
| GluI | GCNGC | 6 cut(s) | 756, 864, 1088, 1722, 1869, 2120 |
| GsaI | CCCAGC | 1 cut(s) | 2126 |
| GsuI | CTGGAG | 2 cut(s) | 531, 2045 |
| HaeII | RGCGCY | 1 cut(s) | 1992 |
| HhaI | GCGC | 2 cut(s) | 26, 1991 |
| Hin1I | GRCGYC | 1 cut(s) | 654 |
| Hin6I | GCGC | 2 cut(s) | 24, 1989 |
| HinP1I | GCGC | 2 cut(s) | 24, 1989 |
| HindIII | AAGCTT | 2 cut(s) | 33, 1326 |
| HinfI | GANTC | 8 cut(s) | 433, 782, 1335, 1563, 1828, 1895, 1976, 2077 |
| HphI | GGTGA | 3 cut(s) | 499, 1376, 1837 |
| Hpy166II | GTNNAC | 3 cut(s) | 698, 1118, 1317 |
| Hpy188I | TCNGA | 7 cut(s) | 16, 462, 681, 925, 1396, 1468, 1840 |
| Hpy8I | GTNNAC | 3 cut(s) | 698, 1118, 1317 |
| Hpy99I | CGWCG | 2 cut(s) | 659, 1224 |
| HpyAV | CCTTC | 4 cut(s) | 477, 1018, 1897, 2102 |
| HpyCH4III | ACNGT | 3 cut(s) | 397, 742, 930 |
| HpyCH4IV | ACGT | 5 cut(s) | 654, 1123, 1284, 1554, 1745 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 32, 362, 869, 1718, 1856, 1865 |
| HpyF3I | CTNAG | 5 cut(s) | 366, 812, 1395, 1605, 1985 |
| HpySE526I | ACGT | 5 cut(s) | 654, 1123, 1284, 1554, 1745 |
| Hsp92I | GRCGYC | 1 cut(s) | 654 |
| HspAI | GCGC | 2 cut(s) | 24, 1989 |
| KpnI | GGTACC | 1 cut(s) | 1998 |
| Ksp22I | TGATCA | 1 cut(s) | 594 |
| Kzo9I | GATC | 3 cut(s) | 594, 920, 1216 |
| LmnI | GCTCC | 4 cut(s) | 512, 712, 1847, 2064 |
| Lsp1109I | GCAGC | 3 cut(s) | 767, 875, 1708 |
| LweI | GCATC | 7 cut(s) | 352, 496, 1245, 1450, 1626, 1721, 1807 |
| MaeI | CTAG | 2 cut(s) | 873, 1167 |
| MaeII | ACGT | 5 cut(s) | 654, 1123, 1284, 1554, 1745 |
| MaeIII | GTNAC | 4 cut(s) | 143, 190, 1910, 2023 |
| MalI | GATC | 3 cut(s) | 596, 922, 1218 |
| MboI | GATC | 3 cut(s) | 594, 920, 1216 |
| MfeI | CAATTG | 1 cut(s) | 1915 |
| MlyI | GAGTC | 2 cut(s) | 791, 1329 |
| MmeI | TCCRAC | 2 cut(s) | 1521, 1825 |
| Mph1103I | ATGCAT | 1 cut(s) | 1822 |
| MslI | CAYNNNNRTG | 3 cut(s) | 279, 357, 2054 |
| MspA1I | CMGCKG | 1 cut(s) | 2122 |
| MspR9I | CCNGG | 2 cut(s) | 1892, 2063 |
| MunI | CAATTG | 1 cut(s) | 1915 |
| MvaI | CCWGG | 2 cut(s) | 1892, 2063 |
| MvnI | CGCG | 1 cut(s) | 26 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 32, 362, 869, 1718, 1856, 1865 |
| NdeI | CATATG | 2 cut(s) | 216, 309 |
| NdeII | GATC | 3 cut(s) | 594, 920, 1216 |
| NlaIV | GGNNCC | 1 cut(s) | 1996 |
| NmuCI | GTSAC | 1 cut(s) | 1910 |
| NsiI | ATGCAT | 1 cut(s) | 1822 |
| NspI | RCATGY | 2 cut(s) | 356, 1304 |
| PaeR7I | CTCGAG | 2 cut(s) | 1007, 1437 |
| PagI | TCATGA | 2 cut(s) | 280, 937 |
| PfeI | GAWTC | 6 cut(s) | 433, 1563, 1828, 1895, 1976, 2077 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 716 |
| PfoI | TCCNGGA | 2 cut(s) | 1890, 2061 |
| PkrI | GCNGC | 6 cut(s) | 757, 865, 1089, 1723, 1870, 2121 |
| PleI | GAGTC | 2 cut(s) | 790, 1329 |
| PpsI | GAGTC | 2 cut(s) | 790, 1329 |
| PshBI | ATTAAT | 2 cut(s) | 321, 1235 |
| Psp6I | CCWGG | 2 cut(s) | 1890, 2061 |
| PspEI | GGTNACC | 1 cut(s) | 143 |
| PspFI | CCCAGC | 1 cut(s) | 2122 |
| PspGI | CCWGG | 2 cut(s) | 1890, 2061 |
| PspN4I | GGNNCC | 1 cut(s) | 1996 |
| PspPI | GGNCC | 1 cut(s) | 1634 |
| PstI | CTGCAG | 3 cut(s) | 865, 1105, 1726 |
| PvuII | CAGCTG | 1 cut(s) | 2122 |
| RsaI | GTAC | 4 cut(s) | 1117, 1679, 1996, 2017 |
| RsaNI | GTAC | 4 cut(s) | 1116, 1678, 1995, 2016 |
| RseI | CAYNNNNRTG | 3 cut(s) | 279, 357, 2054 |
| SatI | GCNGC | 6 cut(s) | 756, 864, 1088, 1722, 1869, 2120 |
| Sau3AI | GATC | 3 cut(s) | 594, 920, 1216 |
| Sau96I | GGNCC | 1 cut(s) | 1634 |
| SchI | GAGTC | 2 cut(s) | 791, 1329 |
| ScrFI | CCNGG | 2 cut(s) | 1892, 2063 |
| SfaNI | GCATC | 7 cut(s) | 352, 496, 1245, 1450, 1626, 1721, 1807 |
| SfcI | CTRYAG | 3 cut(s) | 861, 1101, 1722 |
| Sfr274I | CTCGAG | 2 cut(s) | 1007, 1437 |
| SinI | GGWCC | 1 cut(s) | 1634 |
| SlaI | CTCGAG | 2 cut(s) | 1007, 1437 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 279, 357, 2054 |
| SmlI | CTYRAG | 4 cut(s) | 1007, 1437, 1655, 1971 |
| SmoI | CTYRAG | 4 cut(s) | 1007, 1437, 1655, 1971 |
| SsiI | CCGC | 3 cut(s) | 1087, 1675, 1869 |
| SspI | AATATT | 2 cut(s) | 604, 1144 |
| SspMI | CTAG | 2 cut(s) | 873, 1167 |
| StyD4I | CCNGG | 2 cut(s) | 1890, 2061 |
| TaaI | ACNGT | 3 cut(s) | 397, 742, 930 |
| TaiI | ACGT | 5 cut(s) | 657, 1126, 1287, 1557, 1748 |
| TaqI | TCGA | 8 cut(s) | 325, 475, 1008, 1219, 1438, 1588, 1664, 1767 |
| TatI | WGTACW | 1 cut(s) | 1115 |
| TauI | GCSGC | 2 cut(s) | 1090, 1871 |
| TfiI | GAWTC | 6 cut(s) | 433, 1563, 1828, 1895, 1976, 2077 |
| TscAI | CASTG | 1 cut(s) | 747 |
| TseFI | GTSAC | 1 cut(s) | 1910 |
| TseI | GCWGC | 4 cut(s) | 755, 863, 1721, 2119 |
| Tsp45I | GTSAC | 1 cut(s) | 1910 |
| TspGWI | ACGGA | 2 cut(s) | 255, 933 |
| TspRI | CASTG | 1 cut(s) | 747 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 716 |
| VpaK11BI | GGWCC | 1 cut(s) | 1634 |
| VspI | ATTAAT | 2 cut(s) | 321, 1235 |
| XapI | RAATTY | 6 cut(s) | 245, 378, 1045, 1454, 1780, 2067 |
| XceI | RCATGY | 2 cut(s) | 356, 1304 |
| XhoI | CTCGAG | 2 cut(s) | 1007, 1437 |
| XmiI | GTMKAC | 2 cut(s) | 697, 1316 |
| XspI | CTAG | 2 cut(s) | 873, 1167 |
| ZraI | GACGTC | 1 cut(s) | 655 |
| Zsp2I | ATGCAT | 1 cut(s) | 1822 |