No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59960 AT5G59960 AT5G59960 |
| fragaria_vesca | FvH4_3g35470 FvH4_3g35470 |
| malus_domestica | MD03G1097100.v1.1 MD11G1143700.v1.1 |
| prunus_persica | Prupe.4G098100_v2.0.a1 Prupe.6G081500_v2.0.a1 Prupe.6G081500_v2.0.a1 Prupe.6G081500_v2.0.a1 |
| pyrus_communis | pycom03g08010 pycom11g09330 |
| rosa_chinensis | RchiOBHm_Chr1g0369801 RchiOBHm_Chr5g0063631 |
| rosa_laevigata | RLG00000029314 RLG00000035658 |
| rosa_multiflora | Rmu_sc0000368.1_g000040 Rmu_ssc0000309.1_g000060 |
| rosa_roxburghii | Rroxscaffold_1G00017170 Rroxscaffold_2G00129250 |
| rosa_rugosa | Rorug05G0358400 Rorug05G0358500 Rorug05G0358500 Rorug05G0358600 |
| rosa_samantha | Rh2CG479400 Rh3DG316400 Rh5AG417200 Rh5BG432800 Rh5CG456000 Rh5DG446200 Rh6CG100700 |
| rosa_wichuraiana | Rw3G025090 Rw5G039210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 107 |
| AccBSI | CCGCTC | 1 cut(s) | 58 |
| AciI | CCGC | 2 cut(s) | 58, 105 |
| AclWI | GGATC | 1 cut(s) | 129 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AluBI | AGCT | 2 cut(s) | 15, 146 |
| AluI | AGCT | 2 cut(s) | 15, 146 |
| Alw26I | GTCTC | 1 cut(s) | 25 |
| AlwI | GGATC | 1 cut(s) | 129 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 126 |
| AspLEI | GCGC | 1 cut(s) | 44 |
| AsuII | TTCGAA | 1 cut(s) | 67 |
| AxyI | CCTNAGG | 1 cut(s) | 139 |
| BanI | GGYRCC | 1 cut(s) | 107 |
| BccI | CCATC | 1 cut(s) | 79 |
| BcoDI | GTCTC | 1 cut(s) | 25 |
| BfaI | CTAG | 1 cut(s) | 9 |
| BfmI | CTRYAG | 1 cut(s) | 78 |
| BglII | AGATCT | 1 cut(s) | 92 |
| BmiI | GGNNCC | 1 cut(s) | 109 |
| Bpu14I | TTCGAA | 1 cut(s) | 67 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 25 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 135 |
| Bse21I | CCTNAGG | 1 cut(s) | 139 |
| BseMII | CTCAG | 1 cut(s) | 153 |
| BshNI | GGYRCC | 1 cut(s) | 107 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BsmAI | GTCTC | 1 cut(s) | 25 |
| Bso31I | GGTCTC | 1 cut(s) | 25 |
| Bsp119I | TTCGAA | 1 cut(s) | 67 |
| Bsp143I | GATC | 2 cut(s) | 92, 134 |
| BspACI | CCGC | 2 cut(s) | 58, 105 |
| BspCNI | CTCAG | 1 cut(s) | 152 |
| BspLI | GGNNCC | 1 cut(s) | 109 |
| BspPI | GGATC | 1 cut(s) | 129 |
| BspT104I | TTCGAA | 1 cut(s) | 67 |
| BspT107I | GGYRCC | 1 cut(s) | 107 |
| BspTNI | GGTCTC | 1 cut(s) | 25 |
| BsrBI | CCGCTC | 1 cut(s) | 58 |
| BssMI | GATC | 2 cut(s) | 92, 134 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstBI | TTCGAA | 1 cut(s) | 67 |
| BstDEI | CTNAG | 1 cut(s) | 139 |
| BstHHI | GCGC | 1 cut(s) | 44 |
| BstKTI | GATC | 2 cut(s) | 95, 137 |
| BstMAI | GTCTC | 1 cut(s) | 25 |
| BstMBI | GATC | 2 cut(s) | 92, 134 |
| BstSFI | CTRYAG | 1 cut(s) | 78 |
| BstX2I | RGATCY | 2 cut(s) | 92, 134 |
| BstYI | RGATCY | 2 cut(s) | 92, 134 |
| Bsu36I | CCTNAGG | 1 cut(s) | 139 |
| CfoI | GCGC | 1 cut(s) | 44 |
| CviJI | RGCY | 2 cut(s) | 15, 146 |
| CviKI_1 | RGCY | 2 cut(s) | 15, 146 |
| DdeI | CTNAG | 1 cut(s) | 139 |
| DpnI | GATC | 2 cut(s) | 94, 136 |
| DpnII | GATC | 2 cut(s) | 92, 134 |
| Eco31I | GGTCTC | 1 cut(s) | 25 |
| Eco81I | CCTNAGG | 1 cut(s) | 139 |
| FauI | CCCGC | 1 cut(s) | 51 |
| FspBI | CTAG | 1 cut(s) | 9 |
| GlaI | GCGC | 1 cut(s) | 43 |
| HapII | CCGG | 1 cut(s) | 53 |
| HhaI | GCGC | 1 cut(s) | 44 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin6I | GCGC | 1 cut(s) | 42 |
| HinP1I | GCGC | 1 cut(s) | 42 |
| HinfI | GANTC | 1 cut(s) | 69 |
| HpaII | CCGG | 1 cut(s) | 53 |
| Hpy188I | TCNGA | 1 cut(s) | 132 |
| Hpy188III | TCNNGA | 2 cut(s) | 119, 141 |
| Hpy99I | CGWCG | 1 cut(s) | 33 |
| HpyCH4IV | ACGT | 1 cut(s) | 28 |
| HpyF3I | CTNAG | 1 cut(s) | 139 |
| HpySE526I | ACGT | 1 cut(s) | 28 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| HspAI | GCGC | 1 cut(s) | 42 |
| Kzo9I | GATC | 2 cut(s) | 92, 134 |
| LmnI | GCTCC | 2 cut(s) | 55, 143 |
| LpnPI | CCDG | 5 cut(s) | 66, 81, 90, 104, 126 |
| MaeI | CTAG | 1 cut(s) | 9 |
| MaeII | ACGT | 1 cut(s) | 28 |
| MalI | GATC | 2 cut(s) | 94, 136 |
| MbiI | CCGCTC | 1 cut(s) | 58 |
| MboI | GATC | 2 cut(s) | 92, 134 |
| MflI | RGATCY | 2 cut(s) | 92, 134 |
| MluCI | AATT | 1 cut(s) | 122 |
| MnlI | CCTC | 2 cut(s) | 95, 148 |
| MroXI | GAANNNNTTC | 1 cut(s) | 126 |
| MspI | CCGG | 1 cut(s) | 53 |
| NdeII | GATC | 2 cut(s) | 92, 134 |
| NlaIV | GGNNCC | 1 cut(s) | 109 |
| NspV | TTCGAA | 1 cut(s) | 67 |
| PdmI | GAANNNNTTC | 1 cut(s) | 126 |
| PfeI | GAWTC | 1 cut(s) | 69 |
| PspN4I | GGNNCC | 1 cut(s) | 109 |
| PsuI | RGATCY | 2 cut(s) | 92, 134 |
| Sau3AI | GATC | 2 cut(s) | 92, 134 |
| SetI | ASST | 3 cut(s) | 17, 31, 148 |
| SfcI | CTRYAG | 1 cut(s) | 78 |
| SfuI | TTCGAA | 1 cut(s) | 67 |
| SgeI | CNNG | 8 cut(s) | 21, 28, 65, 71, 89, 108, 131, 153 |
| Sse9I | AATT | 1 cut(s) | 122 |
| SsiI | CCGC | 2 cut(s) | 58, 105 |
| SspMI | CTAG | 1 cut(s) | 9 |
| TaiI | ACGT | 1 cut(s) | 31 |
| TaqI | TCGA | 2 cut(s) | 67, 72 |
| TaqII | GACCGA | 1 cut(s) | 7 |
| TasI | AATT | 1 cut(s) | 122 |
| TfiI | GAWTC | 1 cut(s) | 69 |
| XmnI | GAANNNNTTC | 1 cut(s) | 126 |
| XspI | CTAG | 1 cut(s) | 9 |