pycom11g12430

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
11339482 .. 11340229
748 bp
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UTR
Exon/CDS
Intron
pycom11g12430.3

Sequence Viewer

Length: 273 bp
ATGGTGTCCCTCCTCGTCCTAATTGGGTCACTGCTTACTTTGGAGGCCATGTATATAAAACTGGCACTTTACAGTTTCGCTAGCAATATAATTTTCTCCAATGGGCTACGAGACCCGTTCAGTGGTGGCGGGGTTTTGGAGAACATATCAGACACTGTCGTTGCAGTCCATGCAAAGAATGGATCTCATTGCTTAGATGTACTTCGATCAAACAACATTACTGATCCAGACTGGTTGGTGGAGCAACGAAAAACTGAGGTGAACGATCATTGA

Protein Analysis

91

Amino Acids

9.86

Weight (kDa)

5.07

Isoelectric Point (pI)

41.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 129
AclWI GGATC 2 cut(s) 190, 218
AfaI GTAC 1 cut(s) 201
AfiI CCNNNNNNNGG 1 cut(s) 122
Alw26I GTCTC 1 cut(s) 105
AlwI GGATC 2 cut(s) 190, 218
AlwNI CAGNNNCTG 1 cut(s) 155
AoxI GGCC 1 cut(s) 45
AsuHPI GGTGA 1 cut(s) 271
AsuNHI GCTAGC 1 cut(s) 80
BcoDI GTCTC 1 cut(s) 105
BfaI CTAG 1 cut(s) 81
BmtI GCTAGC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 105
BsaXI ACNNNNNCTCC 2 cut(s) 35, 65
Bsc4I CCNNNNNNNGG 1 cut(s) 122
Bse1I ACTGG 2 cut(s) 66, 236
Bse3DI GCAATG 1 cut(s) 187
BseLI CCNNNNNNNGG 1 cut(s) 122
BseMI GCAATG 1 cut(s) 187
BseMII CTCAG 1 cut(s) 246
BseNI ACTGG 2 cut(s) 66, 236
BshFI GGCC 1 cut(s) 47
BslI CCNNNNNNNGG 1 cut(s) 122
BsmAI GTCTC 1 cut(s) 105
BsnI GGCC 1 cut(s) 47
Bso31I GGTCTC 1 cut(s) 105
Bsp143I GATC 4 cut(s) 182, 206, 223, 265
BspACI CCGC 1 cut(s) 129
BspANI GGCC 1 cut(s) 47
BspCNI CTCAG 1 cut(s) 247
BspOI GCTAGC 1 cut(s) 84
BspPI GGATC 2 cut(s) 190, 218
BspTNI GGTCTC 1 cut(s) 105
BsrDI GCAATG 1 cut(s) 187
BsrI ACTGG 2 cut(s) 66, 236
BssMI GATC 4 cut(s) 182, 206, 223, 265
Bst4CI ACNGT 2 cut(s) 74, 157
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 1 cut(s) 82
BstDEI CTNAG 2 cut(s) 193, 255
BstKTI GATC 4 cut(s) 185, 209, 226, 268
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 4 cut(s) 182, 206, 223, 265
BstMWI GCNNNNNNNGC 1 cut(s) 170
BstX2I RGATCY 1 cut(s) 182
BstYI RGATCY 1 cut(s) 182
BsuRI GGCC 1 cut(s) 47
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 3 cut(s) 29, 127, 153
Cac8I GCNNGC 1 cut(s) 82
CaiI CAGNNNCTG 1 cut(s) 155
Csp6I GTAC 1 cut(s) 200
CviAII CATG 2 cut(s) 49, 170
CviJI RGCY 2 cut(s) 47, 106
CviKI_1 RGCY 2 cut(s) 47, 106
CviQI GTAC 1 cut(s) 200
DdeI CTNAG 2 cut(s) 193, 255
DpnI GATC 4 cut(s) 184, 208, 225, 267
DpnII GATC 4 cut(s) 182, 206, 223, 265
Eco31I GGTCTC 1 cut(s) 105
FaeI CATG 2 cut(s) 52, 173
FaiI YATR 6 cut(s) 50, 54, 56, 89, 146, 171
FatI CATG 2 cut(s) 48, 169
FauI CCCGC 1 cut(s) 122
FspBI CTAG 1 cut(s) 81
HaeIII GGCC 1 cut(s) 47
Hin1II CATG 2 cut(s) 52, 173
HphI GGTGA 1 cut(s) 271
Hpy166II GTNNAC 1 cut(s) 262
Hpy188I TCNGA 1 cut(s) 151
Hpy188III TCNNGA 1 cut(s) 227
Hpy8I GTNNAC 1 cut(s) 262
HpyCH4III ACNGT 2 cut(s) 74, 157
HpyCH4V TGCA 2 cut(s) 164, 173
HpyF10VI GCNNNNNNNGC 1 cut(s) 170
HpyF3I CTNAG 2 cut(s) 193, 255
Hsp92II CATG 2 cut(s) 52, 173
Kzo9I GATC 4 cut(s) 182, 206, 223, 265
LmnI GCTCC 1 cut(s) 241
LpnPI CCDG 3 cut(s) 47, 217, 240
MaeI CTAG 1 cut(s) 81
MaeIII GTNAC 1 cut(s) 27
MalI GATC 4 cut(s) 184, 208, 225, 267
MboI GATC 4 cut(s) 182, 206, 223, 265
MflI RGATCY 1 cut(s) 182
MluCI AATT 2 cut(s) 21, 90
MnlI CCTC 4 cut(s) 20, 23, 37, 250
MwoI GCNNNNNNNGC 1 cut(s) 170
NdeII GATC 4 cut(s) 182, 206, 223, 265
NheI GCTAGC 1 cut(s) 80
NlaIII CATG 2 cut(s) 52, 173
NmuCI GTSAC 1 cut(s) 27
PflFI GACNNNGTC 1 cut(s) 155
PstNI CAGNNNCTG 1 cut(s) 155
PsuI RGATCY 1 cut(s) 182
PsyI GACNNNGTC 1 cut(s) 155
RsaI GTAC 1 cut(s) 201
RsaNI GTAC 1 cut(s) 200
Sau3AI GATC 4 cut(s) 182, 206, 223, 265
SetI ASST 1 cut(s) 261
Sse9I AATT 2 cut(s) 21, 90
SsiI CCGC 1 cut(s) 129
SspMI CTAG 1 cut(s) 81
TaaI ACNGT 2 cut(s) 74, 157
TaqI TCGA 1 cut(s) 205
TasI AATT 2 cut(s) 21, 90
TatI WGTACW 1 cut(s) 199
TscAI CASTG 3 cut(s) 36, 127, 160
TseFI GTSAC 1 cut(s) 27
Tsp45I GTSAC 1 cut(s) 27
TspRI CASTG 3 cut(s) 36, 127, 160
Tth111I GACNNNGTC 1 cut(s) 155
XcmI CCANNNNNNNNNTGG 1 cut(s) 176
XspI CTAG 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.