Rmu_sc0003093.1_g000004

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003093.1
Physical Location & Seq
Reverse (-)
16536 .. 22463
5928 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003093.1_g000004.1.cds

Sequence Viewer

Length: 1473 bp
atggtctggcatgcatcggccgggttgggaagctggaggtgtgatggtggcaggtttggtgtagatcacggcggtgatcacgatgttggcggtggcggtgatgatcaagctggcagtaactctgctagggtttgtgttgactttttgttttgggcttgggtctggtcttctactcatgacggcggtattgttcttgagtactgggacatggtctggtatgcatcggccgggttgggaagctggaggtgtgatggtggcaggtttggtgtagatcacggcgatgatcacaatgttggcggtggcggtgatgatcaagctggcagtaactccgctaggcataggttctatggaaagtctttacctttaggaggcaggaaagatgtggcttatagcaatgcaagtacactgggatatctaagctccacacaagccttggcagattatgcttccttaattattgatttgaagaagaatttgacagcaactaactcacctgtagtggtttttggaggttcctatggaggaatgctggcagcatggtttaggttgaaatatccccatgttacaattggagcgttggcatcatcttctccgatcctcaattttgagaacataacatctccagatagcttctacaatatagtcactaaagactttaggagtgagagtgaaagttgttacagagtgatcaagggctcatgggaaaatatcaaagacaccgcaaagcaacctggagggcttgagctactccggaaatcgtttaaaatatgcacgaataatattagcgtagatgatcttcaaaattggcttgaaactgcttatatttacacagcaatgacggattatcctactccctcgaatttcatgagtcccatgccagcatatccagtgaaacagatgtgtaaggcaatagatgatccaacaacgagaaatgatacatttgcaaagctatatggtgcagctactgtctactataattacagtgggacggccaagtgtttcgatcttaatgatgaatcagatcctcacgacctcggaggatgggattggcaggcgtgtacagagatgataatgcaaacagatggaaacaatgaggagagcatgttcccaccttctgagtggcaatacaaagatcaagtctcttattgcgaagagacttacggcgttgagcctaggcctaattggatcaccacggagtttggcggccatgatatcaagagggttttgagaagatttgggagcaacatcatcttctttaatggcttaagagacccttggagtggtggaggggtgctgaacaatatttccaagaggatagtagcaattgttgcaaaagaaggtgctcaccatgttgacttgaggttcaaaactagagaagatccagaatggcttaacgatgtgaggaagcaagagatcaagatcattggaaagtggatctcagaatattatcatgaccttgctgataaacattag

Protein Analysis

490

Amino Acids

54.6

Weight (kDa)

5.32

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 42, 249
AccI GTMKAC 1 cut(s) 969
AccIII TCCGGA 1 cut(s) 750
AciI CCGC 9 cut(s) 72, 90, 96, 183, 297, 303, 330, 720, 1203
AclWI GGATC 6 cut(s) 589, 911, 1016, 1193, 1373, 1442
AcoI YGGCCR 4 cut(s) 18, 225, 990, 1204
AcsI RAATTY 2 cut(s) 472, 859
AfaI GTAC 3 cut(s) 200, 403, 1060
AfiI CCNNNNNNNGG 2 cut(s) 368, 1280
AflII CTTAAG 1 cut(s) 1264
AgsI TTSAA 5 cut(s) 466, 550, 800, 812, 1366
AjnI CCWGG 1 cut(s) 730
AleI CACNNNNGTG 1 cut(s) 72
AloI GAACNNNNNNTCC 4 cut(s) 1088, 1120, 1289, 1321
AluBI AGCT 9 cut(s) 33, 110, 240, 317, 420, 630, 745, 949, 962
AluI AGCT 9 cut(s) 33, 110, 240, 317, 420, 630, 745, 949, 962
Alw21I GWGCWC 1 cut(s) 1345
Alw26I GTCTC 3 cut(s) 1144, 1148, 1263
AlwI GGATC 6 cut(s) 589, 911, 1016, 1193, 1373, 1442
AlwNI CAGNNNCTG 1 cut(s) 965
Aor13HI TCCGGA 1 cut(s) 750
AoxI GGCC 5 cut(s) 18, 225, 990, 1175, 1204
ApeKI GCWGC 2 cut(s) 533, 959
ApoI RAATTY 2 cut(s) 472, 859
ArsI GACNNNNNNTTYG 2 cut(s) 1122, 1154
AspA2I CCTAGG 1 cut(s) 1172
AsuC2I CCSGG 2 cut(s) 22, 229
AsuHPI GGTGA 6 cut(s) 86, 110, 317, 483, 1180, 1337
AvrII CCTAGG 1 cut(s) 1172
BanII GRGCYC 1 cut(s) 698
BarI GAAGNNNNNNTAC 2 cut(s) 780, 812
BbsI GAAGAC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 1345
BbvI GCAGC 2 cut(s) 545, 971
BccI CCATC 4 cut(s) 38, 245, 1035, 1076
BceAI ACGGC 5 cut(s) 85, 196, 292, 1005, 1177
BciT130I CCWGG 1 cut(s) 732
BclI TGATCA 5 cut(s) 76, 103, 283, 310, 687
BcnI CCSGG 2 cut(s) 22, 229
BcoDI GTCTC 3 cut(s) 1144, 1148, 1263
BfaI CTAG 4 cut(s) 126, 333, 1173, 1371
BfmI CTRYAG 1 cut(s) 495
BfrI CTTAAG 1 cut(s) 1264
BfuAI ACCTGC 2 cut(s) 42, 249
BisI GCNGC 3 cut(s) 534, 960, 1204
BlnI CCTAGG 1 cut(s) 1172
BlsI GCNGC 3 cut(s) 535, 961, 1205
BmcAI AGTACT 1 cut(s) 200
Bme1390I CCNGG 3 cut(s) 22, 229, 732
BmiI GGNNCC 1 cut(s) 514
BmrFI CCNGG 3 cut(s) 22, 229, 732
BmrI ACTGGG 2 cut(s) 211, 416
BmsI GCATC 3 cut(s) 23, 230, 590
BmuI ACTGGG 2 cut(s) 211, 416
BpiI GAAGAC 1 cut(s) 159
BpmI CTGGAG 4 cut(s) 55, 262, 606, 753
BpuEI CTTGAG 3 cut(s) 215, 761, 1378
BpuMI CCSGG 2 cut(s) 22, 229
BsaBI GATNNNNATC 1 cut(s) 1418
BsaI GGTCTC 1 cut(s) 1263
BsaJI CCNNGG 5 cut(s) 432, 1033, 1172, 1191, 1274
BsaWI WCCGGW 1 cut(s) 750
BsaXI ACNNNNNCTCC 4 cut(s) 652, 682, 1088, 1118
Bsc4I CCNNNNNNNGG 2 cut(s) 368, 1280
Bse1I ACTGG 3 cut(s) 206, 411, 887
Bse3DI GCAATG 2 cut(s) 400, 840
Bse8I GATNNNNATC 1 cut(s) 1418
BseAI TCCGGA 1 cut(s) 750
BseBI CCWGG 1 cut(s) 732
BseDI CCNNGG 5 cut(s) 432, 1033, 1172, 1191, 1274
BseGI GGATG 1 cut(s) 1046
BseJI GATNNNNATC 1 cut(s) 1418
BseLI CCNNNNNNNGG 2 cut(s) 368, 1280
BseMI GCAATG 2 cut(s) 400, 840
BseMII CTCAG 2 cut(s) 1107, 1452
BseNI ACTGG 3 cut(s) 206, 411, 887
BseRI GAGGAG 1 cut(s) 1109
BseX3I CGGCCG 2 cut(s) 18, 225
BseXI GCAGC 2 cut(s) 545, 971
BsgI GTGCAG 1 cut(s) 978
Bsh1285I CGRYCG 2 cut(s) 21, 228
BshFI GGCC 5 cut(s) 20, 227, 992, 1177, 1206
BsiEI CGRYCG 2 cut(s) 21, 228
BsiHKAI GWGCWC 1 cut(s) 1345
BsiSI CCGG 3 cut(s) 21, 228, 751
BslFI GGGAC 3 cut(s) 218, 855, 1000
BslI CCNNNNNNNGG 2 cut(s) 368, 1280
BsmAI GTCTC 3 cut(s) 1144, 1148, 1263
BsmFI GGGAC 3 cut(s) 218, 855, 1000
BsmI GAATGC 1 cut(s) 531
BsnI GGCC 5 cut(s) 20, 227, 992, 1177, 1206
Bso31I GGTCTC 1 cut(s) 1263
Bsp1286I GDGCHC 2 cut(s) 698, 1345
Bsp13I TCCGGA 1 cut(s) 750
Bsp1407I TGTACA 1 cut(s) 1058
BspACI CCGC 9 cut(s) 72, 90, 96, 183, 297, 303, 330, 720, 1203
BspANI GGCC 5 cut(s) 20, 227, 992, 1177, 1206
BspCNI CTCAG 2 cut(s) 1108, 1451
BspEI TCCGGA 1 cut(s) 750
BspHI TCATGA 3 cut(s) 175, 864, 1450
BspLI GGNNCC 1 cut(s) 514
BspMI ACCTGC 2 cut(s) 42, 249
BspPI GGATC 6 cut(s) 589, 911, 1016, 1193, 1373, 1442
BspTI CTTAAG 1 cut(s) 1264
BspTNI GGTCTC 1 cut(s) 1263
BsrDI GCAATG 2 cut(s) 400, 840
BsrGI TGTACA 1 cut(s) 1058
BsrI ACTGG 3 cut(s) 206, 411, 887
BssECI CCNNGG 5 cut(s) 432, 1033, 1172, 1191, 1274
BssT1I CCWWGG 3 cut(s) 432, 1172, 1274
Bst2UI CCWGG 1 cut(s) 732
Bst4CI ACNGT 2 cut(s) 967, 983
Bst6I CTCTTC 1 cut(s) 1146
BstAFI CTTAAG 1 cut(s) 1264
BstAPI GCANNNNNTGC 2 cut(s) 443, 1328
BstAUI TGTACA 1 cut(s) 1058
BstC8I GCNNGC 6 cut(s) 12, 112, 319, 531, 879, 1053
BstDEI CTNAG 3 cut(s) 416, 1116, 1438
BstDSI CCRYGG 1 cut(s) 1191
BstENI CCTNNNNNAGG 1 cut(s) 366
BstF5I GGATG 1 cut(s) 1046
BstMAI GTCTC 3 cut(s) 1144, 1148, 1263
BstMCI CGRYCG 2 cut(s) 21, 228
BstMWI GCNNNNNNNGC 2 cut(s) 443, 1328
BstNI CCWGG 1 cut(s) 732
BstNSI RCATGY 2 cut(s) 14, 1105
BstSCI CCNGG 3 cut(s) 20, 227, 730
BstSFI CTRYAG 1 cut(s) 495
BstV1I GCAGC 2 cut(s) 545, 971
BstV2I GAAGAC 1 cut(s) 159
BstX2I RGATCY 3 cut(s) 1021, 1378, 1434
BstYI RGATCY 3 cut(s) 1021, 1378, 1434
BstZI CGGCCG 2 cut(s) 18, 225
BsuRI GGCC 5 cut(s) 20, 227, 992, 1177, 1206
BtgI CCRYGG 1 cut(s) 1191
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 1 cut(s) 1046
BtsIMutI CAGTG 3 cut(s) 404, 894, 988
BveI ACCTGC 2 cut(s) 42, 249
Cac8I GCNNGC 6 cut(s) 12, 112, 319, 531, 879, 1053
CaiI CAGNNNCTG 1 cut(s) 965
CciI TCATGA 3 cut(s) 175, 864, 1450
Csp6I GTAC 3 cut(s) 199, 402, 1059
CspCI CAANNNNNGTGG 2 cut(s) 1180, 1215
CviQI GTAC 3 cut(s) 199, 402, 1059
DdeI CTNAG 3 cut(s) 416, 1116, 1438
DraI TTTAAA 1 cut(s) 763
EaeI YGGCCR 4 cut(s) 18, 225, 990, 1204
EagI CGGCCG 2 cut(s) 18, 225
Eam1104I CTCTTC 1 cut(s) 1146
EarI CTCTTC 1 cut(s) 1146
EclXI CGGCCG 2 cut(s) 18, 225
Eco130I CCWWGG 3 cut(s) 432, 1172, 1274
Eco147I AGGCCT 1 cut(s) 1177
Eco24I GRGCYC 1 cut(s) 698
Eco31I GGTCTC 1 cut(s) 1263
Eco32I GATATC 2 cut(s) 413, 1213
Eco52I CGGCCG 2 cut(s) 18, 225
EcoNI CCTNNNNNAGG 1 cut(s) 366
EcoRII CCWGG 1 cut(s) 730
EcoRV GATATC 2 cut(s) 413, 1213
EcoT14I CCWWGG 3 cut(s) 432, 1172, 1274
EcoT22I ATGCAT 2 cut(s) 16, 223
EcoT38I GRGCYC 1 cut(s) 698
ErhI CCWWGG 3 cut(s) 432, 1172, 1274
FalI AAGNNNNNCTT 2 cut(s) 1258, 1290
FaqI GGGAC 3 cut(s) 218, 855, 1000
FbaI TGATCA 5 cut(s) 76, 103, 283, 310, 687
FblI GTMKAC 1 cut(s) 969
Fnu4HI GCNGC 3 cut(s) 534, 960, 1204
FokI GGATG 1 cut(s) 1053
FriOI GRGCYC 1 cut(s) 698
Fsp4HI GCNGC 3 cut(s) 534, 960, 1204
FspBI CTAG 4 cut(s) 126, 333, 1173, 1371
GluI GCNGC 3 cut(s) 534, 960, 1204
GsuI CTGGAG 4 cut(s) 55, 262, 606, 753
HaeIII GGCC 5 cut(s) 20, 227, 992, 1177, 1206
HapII CCGG 3 cut(s) 21, 228, 751
HincII GTYRAC 2 cut(s) 139, 1354
HindII GTYRAC 2 cut(s) 139, 1354
HinfI GANTC 2 cut(s) 868, 1016
HpaII CCGG 3 cut(s) 21, 228, 751
HphI GGTGA 6 cut(s) 86, 110, 317, 483, 1180, 1337
Hpy166II GTNNAC 5 cut(s) 139, 404, 970, 1059, 1354
Hpy188I TCNGA 5 cut(s) 594, 1021, 1037, 1117, 1441
Hpy8I GTNNAC 5 cut(s) 139, 404, 970, 1059, 1354
HpyAV CCTTC 2 cut(s) 1122, 1331
HpyCH4III ACNGT 2 cut(s) 967, 983
HpyCH4V TGCA 8 cut(s) 14, 221, 398, 771, 944, 959, 1075, 1331
HpyF10VI GCNNNNNNNGC 2 cut(s) 443, 1328
HpyF3I CTNAG 3 cut(s) 416, 1116, 1438
Kpn2I TCCGGA 1 cut(s) 750
Ksp22I TGATCA 5 cut(s) 76, 103, 283, 310, 687
LmnI GCTCC 3 cut(s) 425, 572, 1239
Lsp1109I GCAGC 2 cut(s) 545, 971
LweI GCATC 3 cut(s) 23, 230, 590
MaeI CTAG 4 cut(s) 126, 333, 1173, 1371
MaeIII GTNAC 5 cut(s) 116, 323, 562, 643, 677
MboII GAAGA 9 cut(s) 159, 478, 481, 579, 788, 1163, 1242, 1243, 1388
MfeI CAATTG 2 cut(s) 567, 1323
MflI RGATCY 3 cut(s) 1021, 1378, 1434
MhlI GDGCHC 2 cut(s) 698, 1345
MluCI AATT 9 cut(s) 453, 472, 567, 601, 802, 859, 976, 1180, 1323
MlyI GAGTC 1 cut(s) 877
MmeI TCCRAC 1 cut(s) 944
Mph1103I ATGCAT 2 cut(s) 16, 223
MroI TCCGGA 1 cut(s) 750
MseI TTAA 6 cut(s) 452, 762, 1008, 1257, 1265, 1392
MslI CAYNNNNRTG 3 cut(s) 72, 279, 833
MspCI CTTAAG 1 cut(s) 1264
MspI CCGG 3 cut(s) 21, 228, 751
MspR9I CCNGG 3 cut(s) 22, 229, 732
MunI CAATTG 2 cut(s) 567, 1323
Mva1269I GAATGC 1 cut(s) 531
MvaI CCWGG 1 cut(s) 732
MwoI GCNNNNNNNGC 2 cut(s) 443, 1328
NciI CCSGG 2 cut(s) 22, 229
NlaIV GGNNCC 1 cut(s) 514
NmuCI GTSAC 1 cut(s) 643
NsiI ATGCAT 2 cut(s) 16, 223
NspI RCATGY 2 cut(s) 14, 1105
OliI CACNNNNGTG 1 cut(s) 72
PaeI GCATGC 1 cut(s) 14
PagI TCATGA 3 cut(s) 175, 864, 1450
PceI AGGCCT 1 cut(s) 1177
PctI GAATGC 1 cut(s) 531
PfeI GAWTC 1 cut(s) 1016
PflFI GACNNNGTC 1 cut(s) 209
PkrI GCNGC 3 cut(s) 535, 961, 1205
PleI GAGTC 1 cut(s) 876
PpsI GAGTC 1 cut(s) 876
Psp6I CCWGG 1 cut(s) 730
PspGI CCWGG 1 cut(s) 730
PspN4I GGNNCC 1 cut(s) 514
PstNI CAGNNNCTG 1 cut(s) 965
PsuI RGATCY 3 cut(s) 1021, 1378, 1434
PsyI GACNNNGTC 1 cut(s) 209
RsaI GTAC 3 cut(s) 200, 403, 1060
RsaNI GTAC 3 cut(s) 199, 402, 1059
RseI CAYNNNNRTG 3 cut(s) 72, 279, 833
SaqAI TTAA 6 cut(s) 452, 762, 1008, 1257, 1265, 1392
SatI GCNGC 3 cut(s) 534, 960, 1204
ScaI AGTACT 1 cut(s) 200
SchI GAGTC 1 cut(s) 877
ScrFI CCNGG 3 cut(s) 22, 229, 732
SduI GDGCHC 2 cut(s) 698, 1345
SfaNI GCATC 3 cut(s) 23, 230, 590
SfcI CTRYAG 1 cut(s) 495
SmiMI CAYNNNNRTG 3 cut(s) 72, 279, 833
SmlI CTYRAG 4 cut(s) 194, 740, 1264, 1357
SmoI CTYRAG 4 cut(s) 194, 740, 1264, 1357
SphI GCATGC 1 cut(s) 14
Sse9I AATT 9 cut(s) 453, 472, 567, 601, 802, 859, 976, 1180, 1323
SseBI AGGCCT 1 cut(s) 1177
SsiI CCGC 9 cut(s) 72, 90, 96, 183, 297, 303, 330, 720, 1203
SspI AATATT 3 cut(s) 781, 1303, 1445
SspMI CTAG 4 cut(s) 126, 333, 1173, 1371
StuI AGGCCT 1 cut(s) 1177
StyD4I CCNGG 3 cut(s) 20, 227, 730
StyI CCWWGG 3 cut(s) 432, 1172, 1274
TaaI ACNGT 2 cut(s) 967, 983
TaqI TCGA 2 cut(s) 857, 1002
TasI AATT 9 cut(s) 453, 472, 567, 601, 802, 859, 976, 1180, 1323
TatI WGTACW 3 cut(s) 198, 401, 1058
TauI GCSGC 1 cut(s) 1206
TfiI GAWTC 1 cut(s) 1016
Tru1I TTAA 6 cut(s) 452, 762, 1008, 1257, 1265, 1392
Tru9I TTAA 6 cut(s) 452, 762, 1008, 1257, 1265, 1392
TscAI CASTG 3 cut(s) 411, 894, 988
TseFI GTSAC 1 cut(s) 643
TseI GCWGC 2 cut(s) 533, 959
Tsp45I GTSAC 1 cut(s) 643
TspDTI ATGAA 2 cut(s) 853, 1029
TspGWI ACGGA 2 cut(s) 854, 1208
TspRI CASTG 3 cut(s) 411, 894, 988
Tth111I GACNNNGTC 1 cut(s) 209
Vha464I CTTAAG 1 cut(s) 1264
XagI CCTNNNNNAGG 1 cut(s) 366
XapI RAATTY 2 cut(s) 472, 859
XceI RCATGY 2 cut(s) 14, 1105
XcmI CCANNNNNNNNNTGG 3 cut(s) 430, 566, 1116
XmaJI CCTAGG 1 cut(s) 1172
XmiI GTMKAC 1 cut(s) 969
XspI CTAG 4 cut(s) 126, 333, 1173, 1371
ZrmI AGTACT 1 cut(s) 200
Zsp2I ATGCAT 2 cut(s) 16, 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.