Rmu_sc0003093.1_g000003

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003093.1
Physical Location & Seq
Reverse (-)
9015 .. 13235
4221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003093.1_g000003.1.cds

Sequence Viewer

Length: 1758 bp
atgaagaagatgacagaatctgggtccccatttcttttcttcttctctttcttctgtttgctgattcattgtcttcctgtctactctgccaaatccccccctcctagattcccatcttcactaatatccccagaagataagatatcactttctgctcgtcaaaaccaactttacagaaccaaatacttcacccaagtccttgatcatttcaattactatcccaagagctatgaatcttttcaacagaggtatttgataaatgatacgttctggggaggcgccaagagcaatgctccaatctttgtctacactggtaatgaagggaacatagaatggtttgcgcagaacactggttttctgtatgagacagcgccccagttcaaagccctcatcattttcattgagcataggttctatggaaagtctataccttttgggggcaagaaatatgtggcttatagcaattcaactacactcggatatctaagctccacacaagccttggcagattatgcttcgttaattattgatttaaagaataatttgacagcaactgactcacctgtagtggtctttggaggttcctatggaggaatgctggcagcatggtttaggttgaagtatccccatgttacaattggagctttggcatcatcttccccagtcctcaattttcagaatataacatctccttatagcttcaacgatatagtcaccaaagactttaggagtgagagtgaaagttgttacaaagtgatcaaaggctcatggcaacagatcgaagacactgcaaaccaacatggagggcttgagctactccggaaatcgtttaaaatatgcaagaattatattagcgcagatgatcttgaaggttggcttagaaccgcttatatttacacagcaatgacagattatcctactccctcgaatttcttaaatcccatgccagcatatccagtgaaacagatgtgtaaggcgatagatgatccaacgacaggaaatgatacatttgcaaaattatatggtgcagctactgtctactataactacagtgggacggctacgtgtttcgatcttaatgataactcagatcctcacgacctcggaggatggcaatggcagatgtgtaaggcgatagatgatccaacgacaggaaatgatacatttgcaaaattatatggtgcagctactgtctactacaactacagtgggacggctacgtgtttcgatcttaatgataactcagatcctcacgacctcggaggatggcaatggcagagtttgggtaaaatagagtatctcgtcgcacttgttcggcggcaccctcacgatgacgacaactccttgcttagtcggcatgagataggtgtagccagacgggctatggtgttgttagttcgaagtcctgggtgggagatgctgcgccggtttctcttgtcttctcatgcgaaattgatggcggcttcagggagaacatggtggtggtatggtgttctatggcagattgttgagccatggttgagggttcatcaatatctgagtctgatcaggtcaatctctacaataattttgggtggatctgggtttggattattggggacaatcttccagggctgggttaatgggagaaggggataccggacttggcagcggtgggcacgatggttggcggtgtacaacaccgtggtatataattgttggcttgctctggtatcttcaggctgtgtgtggtgggctgctattggagtagatgtgtga

Protein Analysis

585

Amino Acids

66.41

Weight (kDa)

8.47

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 342
AccB1I GGYRCC 2 cut(s) 278, 1320
AccI GTMKAC 4 cut(s) 81, 306, 1038, 1194
AccIII TCCGGA 1 cut(s) 819
AciI CCGC 5 cut(s) 885, 1318, 1460, 1651, 1670
AclWI GGATC 5 cut(s) 980, 1085, 1136, 1241, 1585
AcsI RAATTY 1 cut(s) 928
AcuI CTGAAG 2 cut(s) 1449, 1701
AcyI GRCGYC 1 cut(s) 279
AfaI GTAC 1 cut(s) 1676
AfiI CCNNNNNNNGG 4 cut(s) 437, 995, 1151, 1615
AflIII ACRYGT 2 cut(s) 1064, 1220
AgsI TTSAA 7 cut(s) 211, 242, 382, 468, 619, 703, 869
AjnI CCWGG 2 cut(s) 1405, 1608
AluBI AGCT 7 cut(s) 228, 489, 644, 699, 814, 1031, 1187
AluI AGCT 7 cut(s) 228, 489, 644, 699, 814, 1031, 1187
Alw26I GTCTC 1 cut(s) 359
AlwI GGATC 5 cut(s) 980, 1085, 1136, 1241, 1585
AlwNI CAGNNNCTG 4 cut(s) 20, 554, 1034, 1190
Aor13HI TCCGGA 1 cut(s) 819
ApeKI GCWGC 6 cut(s) 602, 1028, 1184, 1420, 1648, 1736
ApoI RAATTY 1 cut(s) 928
Asp700I GAANNNNTTC 1 cut(s) 237
AspLEI GCGC 5 cut(s) 281, 343, 373, 857, 1425
AspS9I GGNCC 1 cut(s) 24
AsuHPI GGTGA 3 cut(s) 181, 552, 706
AsuII TTCGAA 1 cut(s) 1399
AvaII GGWCC 1 cut(s) 24
BaeGI GKGCMC 1 cut(s) 1660
BanI GGYRCC 2 cut(s) 278, 1320
BbsI GAAGAC 3 cut(s) 65, 789, 1431
BbvI GCAGC 6 cut(s) 614, 1040, 1196, 1407, 1660, 1723
BccI CCATC 5 cut(s) 121, 1104, 1260, 1450, 1656
BceAI ACGGC 2 cut(s) 1074, 1230
BcgI CGANNNNNNTGC 2 cut(s) 770, 804
BciT130I CCWGG 2 cut(s) 1407, 1610
BciVI GTATCC 2 cut(s) 633, 1628
BclI TGATCA 3 cut(s) 202, 756, 1545
BcoDI GTCTC 1 cut(s) 359
BfaI CTAG 1 cut(s) 105
BfmI CTRYAG 3 cut(s) 564, 1048, 1204
BfoI RGCGCY 2 cut(s) 282, 374
BfuI GTATCC 2 cut(s) 633, 1628
BglI GCCNNNNNGGC 1 cut(s) 1379
BisI GCNGC 8 cut(s) 603, 1029, 1185, 1319, 1421, 1461, 1649, 1737
BlsI GCNGC 8 cut(s) 604, 1030, 1186, 1320, 1422, 1462, 1650, 1738
Bme1390I CCNGG 2 cut(s) 1407, 1610
Bme18I GGWCC 1 cut(s) 24
BmgT120I GGNCC 1 cut(s) 24
BmiI GGNNCC 5 cut(s) 25, 26, 280, 583, 1322
BmrFI CCNGG 2 cut(s) 1407, 1610
BmrI ACTGGG 2 cut(s) 370, 656
BmsI GCATC 2 cut(s) 659, 1407
BmuI ACTGGG 2 cut(s) 370, 656
BpiI GAAGAC 3 cut(s) 65, 789, 1431
BplI GAGNNNNNCTC 2 cut(s) 277, 309
Bpu14I TTCGAA 1 cut(s) 1399
BpuEI CTTGAG 1 cut(s) 830
BsaAI YACGTR 2 cut(s) 1065, 1221
BsaBI GATNNNNATC 1 cut(s) 112
BsaHI GRCGYC 1 cut(s) 279
BsaJI CCNNGG 7 cut(s) 501, 1102, 1258, 1406, 1514, 1609, 1683
BsaWI WCCGGW 2 cut(s) 819, 1638
BsaXI ACNNNNNCTCC 5 cut(s) 721, 751, 1325, 1355, 1737
Bsc4I CCNNNNNNNGG 4 cut(s) 437, 995, 1151, 1615
Bse118I RCCGGY 1 cut(s) 1425
Bse1I ACTGG 5 cut(s) 316, 355, 376, 662, 956
Bse3DI GCAATG 4 cut(s) 295, 909, 1121, 1277
Bse8I GATNNNNATC 1 cut(s) 112
BseAI TCCGGA 1 cut(s) 819
BseBI CCWGG 2 cut(s) 1407, 1610
BseDI CCNNGG 7 cut(s) 501, 1102, 1258, 1406, 1514, 1609, 1683
BseGI GGATG 2 cut(s) 1115, 1271
BseJI GATNNNNATC 1 cut(s) 112
BseLI CCNNNNNNNGG 4 cut(s) 437, 995, 1151, 1615
BseMI GCAATG 4 cut(s) 295, 909, 1121, 1277
BseMII CTCAG 3 cut(s) 1101, 1257, 1529
BseNI ACTGG 5 cut(s) 316, 355, 376, 662, 956
BseSI GKGCMC 1 cut(s) 1660
BseXI GCAGC 6 cut(s) 614, 1040, 1196, 1407, 1660, 1723
BseYI CCCAGC 1 cut(s) 1614
BsgI GTGCAG 2 cut(s) 1047, 1203
BshNI GGYRCC 2 cut(s) 278, 1320
BsiSI CCGG 3 cut(s) 820, 1426, 1639
BslFI GGGAC 4 cut(s) 10, 1069, 1225, 1612
BslI CCNNNNNNNGG 4 cut(s) 437, 995, 1151, 1615
BsmAI GTCTC 1 cut(s) 359
BsmFI GGGAC 4 cut(s) 10, 1069, 1225, 1612
BsmI GAATGC 1 cut(s) 600
Bsp119I TTCGAA 1 cut(s) 1399
Bsp1286I GDGCHC 1 cut(s) 1660
Bsp13I TCCGGA 1 cut(s) 819
Bsp1407I TGTACA 1 cut(s) 1674
Bsp19I CCATGG 1 cut(s) 1514
BspACI CCGC 5 cut(s) 885, 1318, 1460, 1651, 1670
BspCNI CTCAG 3 cut(s) 1100, 1256, 1530
BspEI TCCGGA 1 cut(s) 819
BspLI GGNNCC 5 cut(s) 25, 26, 280, 583, 1322
BspPI GGATC 5 cut(s) 980, 1085, 1136, 1241, 1585
BspT104I TTCGAA 1 cut(s) 1399
BspT107I GGYRCC 2 cut(s) 278, 1320
BsrDI GCAATG 4 cut(s) 295, 909, 1121, 1277
BsrFI RCCGGY 1 cut(s) 1425
BsrGI TGTACA 1 cut(s) 1674
BsrI ACTGG 5 cut(s) 316, 355, 376, 662, 956
BssAI RCCGGY 1 cut(s) 1425
BssECI CCNNGG 7 cut(s) 501, 1102, 1258, 1406, 1514, 1609, 1683
BssNI GRCGYC 1 cut(s) 279
BssT1I CCWWGG 2 cut(s) 501, 1514
Bst2UI CCWGG 2 cut(s) 1407, 1610
Bst4CI ACNGT 5 cut(s) 1036, 1052, 1192, 1208, 1684
BstACI GRCGYC 1 cut(s) 279
BstAPI GCANNNNNTGC 1 cut(s) 512
BstAUI TGTACA 1 cut(s) 1674
BstBAI YACGTR 2 cut(s) 1065, 1221
BstBI TTCGAA 1 cut(s) 1399
BstC8I GCNNGC 3 cut(s) 600, 948, 1704
BstDEI CTNAG 6 cut(s) 485, 878, 1087, 1243, 1349, 1538
BstDSI CCRYGG 2 cut(s) 1514, 1683
BstF5I GGATG 2 cut(s) 1115, 1271
BstH2I RGCGCY 2 cut(s) 282, 374
BstHHI GCGC 5 cut(s) 281, 343, 373, 857, 1425
BstMAI GTCTC 1 cut(s) 359
BstMWI GCNNNNNNNGC 4 cut(s) 285, 512, 1354, 1379
BstNI CCWGG 2 cut(s) 1407, 1610
BstSCI CCNGG 2 cut(s) 1405, 1608
BstSFI CTRYAG 3 cut(s) 564, 1048, 1204
BstSLI GKGCMC 1 cut(s) 1660
BstV1I GCAGC 6 cut(s) 614, 1040, 1196, 1407, 1660, 1723
BstV2I GAAGAC 3 cut(s) 65, 789, 1431
BstX2I RGATCY 3 cut(s) 1090, 1246, 1577
BstYI RGATCY 3 cut(s) 1090, 1246, 1577
BsuI GTATCC 2 cut(s) 633, 1628
BtgI CCRYGG 2 cut(s) 1514, 1683
BtsCI GGATG 2 cut(s) 1115, 1271
BtsI GCAGTG 1 cut(s) 786
BtsIMutI CAGTG 6 cut(s) 309, 348, 786, 963, 1057, 1213
Cac8I GCNNGC 3 cut(s) 600, 948, 1704
CaiI CAGNNNCTG 4 cut(s) 20, 554, 1034, 1190
CfoI GCGC 5 cut(s) 281, 343, 373, 857, 1425
Cfr10I RCCGGY 1 cut(s) 1425
Cfr13I GGNCC 1 cut(s) 24
Csp6I GTAC 1 cut(s) 1675
CspCI CAANNNNNGTGG 2 cut(s) 1189, 1224
CviAII CATG 9 cut(s) 606, 629, 768, 800, 943, 1358, 1445, 1476, 1515
CviQI GTAC 1 cut(s) 1675
DdeI CTNAG 6 cut(s) 485, 878, 1087, 1243, 1349, 1538
DinI GGCGCC 1 cut(s) 280
DraI TTTAAA 2 cut(s) 534, 832
Eco130I CCWWGG 2 cut(s) 501, 1514
Eco32I GATATC 2 cut(s) 144, 482
Eco47I GGWCC 1 cut(s) 24
Eco57I CTGAAG 2 cut(s) 1449, 1701
EcoO109I RGGNCCY 1 cut(s) 24
EcoRII CCWGG 2 cut(s) 1405, 1608
EcoRV GATATC 2 cut(s) 144, 482
EcoT14I CCWWGG 2 cut(s) 501, 1514
EgeI GGCGCC 1 cut(s) 280
EheI GGCGCC 1 cut(s) 280
ErhI CCWWGG 2 cut(s) 501, 1514
FaeI CATG 9 cut(s) 609, 632, 771, 803, 946, 1361, 1448, 1479, 1518
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 4 cut(s) 10, 1069, 1225, 1612
FatI CATG 9 cut(s) 605, 628, 767, 799, 942, 1357, 1444, 1475, 1514
FbaI TGATCA 3 cut(s) 202, 756, 1545
FblI GTMKAC 4 cut(s) 81, 306, 1038, 1194
Fnu4HI GCNGC 8 cut(s) 603, 1029, 1185, 1319, 1421, 1461, 1649, 1737
FokI GGATG 2 cut(s) 1122, 1278
Fsp4HI GCNGC 8 cut(s) 603, 1029, 1185, 1319, 1421, 1461, 1649, 1737
FspBI CTAG 1 cut(s) 105
FspI TGCGCA 1 cut(s) 342
GlaI GCGC 5 cut(s) 280, 342, 372, 856, 1424
GluI GCNGC 8 cut(s) 603, 1029, 1185, 1319, 1421, 1461, 1649, 1737
GsaI CCCAGC 1 cut(s) 1618
HaeII RGCGCY 2 cut(s) 282, 374
HapII CCGG 3 cut(s) 820, 1426, 1639
HhaI GCGC 5 cut(s) 281, 343, 373, 857, 1425
Hin1I GRCGYC 1 cut(s) 279
Hin1II CATG 9 cut(s) 609, 632, 771, 803, 946, 1361, 1448, 1479, 1518
Hin6I GCGC 5 cut(s) 279, 341, 371, 855, 1423
HinP1I GCGC 5 cut(s) 279, 341, 371, 855, 1423
HinfI GANTC 6 cut(s) 17, 64, 108, 233, 557, 1540
HpaII CCGG 3 cut(s) 820, 1426, 1639
HphI GGTGA 3 cut(s) 181, 552, 706
Hpy166II GTNNAC 5 cut(s) 82, 307, 1039, 1195, 1675
Hpy188I TCNGA 8 cut(s) 479, 678, 1090, 1106, 1246, 1262, 1539, 1545
Hpy188III TCNNGA 5 cut(s) 820, 866, 1097, 1253, 1328
Hpy8I GTNNAC 5 cut(s) 82, 307, 1039, 1195, 1675
Hpy99I CGWCG 1 cut(s) 1307
HpyAV CCTTC 3 cut(s) 314, 863, 1623
HpyCH4III ACNGT 5 cut(s) 1036, 1052, 1192, 1208, 1684
HpyCH4IV ACGT 3 cut(s) 266, 1064, 1220
HpyCH4V TGCA 6 cut(s) 791, 840, 1013, 1028, 1169, 1184
HpyF10VI GCNNNNNNNGC 4 cut(s) 285, 512, 1354, 1379
HpyF3I CTNAG 6 cut(s) 485, 878, 1087, 1243, 1349, 1538
HpySE526I ACGT 3 cut(s) 266, 1064, 1220
Hsp92I GRCGYC 1 cut(s) 279
Hsp92II CATG 9 cut(s) 609, 632, 771, 803, 946, 1361, 1448, 1479, 1518
HspAI GCGC 5 cut(s) 279, 341, 371, 855, 1423
KasI GGCGCC 1 cut(s) 278
KflI GGGWCCC 1 cut(s) 24
Kpn2I TCCGGA 1 cut(s) 819
Ksp22I TGATCA 3 cut(s) 202, 756, 1545
LmnI GCTCC 3 cut(s) 298, 494, 641
Lsp1109I GCAGC 6 cut(s) 614, 1040, 1196, 1407, 1660, 1723
LweI GCATC 2 cut(s) 659, 1407
MaeI CTAG 1 cut(s) 105
MaeII ACGT 3 cut(s) 266, 1064, 1220
MaeIII GTNAC 3 cut(s) 631, 712, 746
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 3 cut(s) 1090, 1246, 1577
MhlI GDGCHC 1 cut(s) 1660
Mly113I GGCGCC 1 cut(s) 279
MlyI GAGTC 2 cut(s) 551, 1549
MmeI TCCRAC 2 cut(s) 1013, 1169
MroI TCCGGA 1 cut(s) 819
MroXI GAANNNNTTC 1 cut(s) 237
MseI TTAA 7 cut(s) 521, 533, 831, 935, 1077, 1233, 1620
MslI CAYNNNNRTG 2 cut(s) 902, 1480
MspA1I CMGCKG 1 cut(s) 1651
MspI CCGG 3 cut(s) 820, 1426, 1639
MspR9I CCNGG 2 cut(s) 1407, 1610
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 1 cut(s) 600
MvaI CCWGG 2 cut(s) 1407, 1610
MwoI GCNNNNNNNGC 4 cut(s) 285, 512, 1354, 1379
NarI GGCGCC 1 cut(s) 279
NcoI CCATGG 1 cut(s) 1514
NlaIII CATG 9 cut(s) 609, 632, 771, 803, 946, 1361, 1448, 1479, 1518
NlaIV GGNNCC 5 cut(s) 25, 26, 280, 583, 1322
NmuCI GTSAC 1 cut(s) 712
NsbI TGCGCA 1 cut(s) 342
NspV TTCGAA 1 cut(s) 1399
PctI GAATGC 1 cut(s) 600
PdmI GAANNNNTTC 1 cut(s) 237
PfeI GAWTC 4 cut(s) 17, 64, 108, 233
PkrI GCNGC 8 cut(s) 604, 1030, 1186, 1320, 1422, 1462, 1650, 1738
PleI GAGTC 2 cut(s) 551, 1548
PluTI GGCGCC 1 cut(s) 282
PpsI GAGTC 2 cut(s) 551, 1548
Ppu21I YACGTR 2 cut(s) 1065, 1221
PpuMI RGGWCCY 1 cut(s) 24
Psp5II RGGWCCY 1 cut(s) 24
Psp6I CCWGG 2 cut(s) 1405, 1608
PspFI CCCAGC 1 cut(s) 1614
PspGI CCWGG 2 cut(s) 1405, 1608
PspN4I GGNNCC 5 cut(s) 25, 26, 280, 583, 1322
PspPI GGNCC 1 cut(s) 24
PspPPI RGGWCCY 1 cut(s) 24
PstNI CAGNNNCTG 4 cut(s) 20, 554, 1034, 1190
PsuI RGATCY 3 cut(s) 1090, 1246, 1577
RsaI GTAC 1 cut(s) 1676
RsaNI GTAC 1 cut(s) 1675
RseI CAYNNNNRTG 2 cut(s) 902, 1480
SaqAI TTAA 7 cut(s) 521, 533, 831, 935, 1077, 1233, 1620
SatI GCNGC 8 cut(s) 603, 1029, 1185, 1319, 1421, 1461, 1649, 1737
Sau96I GGNCC 1 cut(s) 24
SchI GAGTC 2 cut(s) 551, 1549
ScrFI CCNGG 2 cut(s) 1407, 1610
SduI GDGCHC 1 cut(s) 1660
SfaNI GCATC 2 cut(s) 659, 1407
SfcI CTRYAG 3 cut(s) 564, 1048, 1204
SfoI GGCGCC 1 cut(s) 280
SfuI TTCGAA 1 cut(s) 1399
SinI GGWCC 1 cut(s) 24
SmiMI CAYNNNNRTG 2 cut(s) 902, 1480
SmlI CTYRAG 1 cut(s) 809
SmoI CTYRAG 1 cut(s) 809
SsiI CCGC 5 cut(s) 885, 1318, 1460, 1651, 1670
SspDI GGCGCC 1 cut(s) 278
SspMI CTAG 1 cut(s) 105
StyD4I CCNGG 2 cut(s) 1405, 1608
StyI CCWWGG 2 cut(s) 501, 1514
TaaI ACNGT 5 cut(s) 1036, 1052, 1192, 1208, 1684
TaiI ACGT 3 cut(s) 269, 1067, 1223
TaqI TCGA 5 cut(s) 780, 926, 1071, 1227, 1399
TatI WGTACW 1 cut(s) 1674
TauI GCSGC 2 cut(s) 1321, 1463
TfiI GAWTC 4 cut(s) 17, 64, 108, 233
Tru1I TTAA 7 cut(s) 521, 533, 831, 935, 1077, 1233, 1620
Tru9I TTAA 7 cut(s) 521, 533, 831, 935, 1077, 1233, 1620
TscAI CASTG 6 cut(s) 316, 355, 793, 963, 1057, 1213
TseFI GTSAC 1 cut(s) 712
TseI GCWGC 6 cut(s) 602, 1028, 1184, 1420, 1648, 1736
Tsp45I GTSAC 1 cut(s) 712
TspDTI ATGAA 6 cut(s) 17, 56, 246, 333, 388, 1517
TspRI CASTG 6 cut(s) 316, 355, 793, 963, 1057, 1213
VpaK11BI GGWCC 1 cut(s) 24
XapI RAATTY 1 cut(s) 928
XcmI CCANNNNNNNNNTGG 3 cut(s) 499, 635, 1381
XmiI GTMKAC 4 cut(s) 81, 306, 1038, 1194
XmnI GAANNNNTTC 1 cut(s) 237
XspI CTAG 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.