Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0006198

Physical Location & Seq

Genomic Coordinates Forward (+)

27626417 .. 27627834

Gene Structure 1418 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 735 bp

ATGTGGAATCAGGCGTTTCGGAAGAGTGATCCGGAGGCCGGACTGAGGCCGCTTTACCCTATGATGCTCGAGAGCCCCGAGCTCCGGTGGTCCTTCATCCGCAAAATCTACGCGATCGTTGCCATCCAATTAGTCGCCACCATCGCTGTAGGCGCCGTCGTCGTTTCGGTCCGGCCGGTGGCTAACTTCTTTGTCAGCACCGGCGCCGGCCTGGCGCTCTACATCGTTCTCATCATCACGCCTTTCATCGTGCTGTGCCCGCTGTACTATTACCACCAGAAGCATCCGGTTAATTACCTTTTACTGGGAATTTTTACCATCTCACTGGCATTTGTCGTCGGTTTGACTTGTGCATTTACTAGCGGGAAGGTGATTTTGGAGTCGGTTATTCTGACGGCAGTGGTCGTTATTGGTCTGACCTTGTACACATTTTGGGCTGCAAGGAGAGGCCAAGATTTCAACTTTCTTGGTCCCTTCTTGTTCGGAGCTCTACTGGTTCTGATCGTATTTGGTCTGATTCAGGTTTTCTTCCCGCTTGGTAAGATATCAGTGATGATATATGGTTGCTTGGCGTCGATCATATTTTGTGGGTATATTGTGTATGACACGGACAACTTCAGATCGATCAAGCGATACTCTTACGACGAGTACATTTGGGCTGCAGTTTCCTTGTATTTGGATATCATCAACCTCTTCCTAGCTCTTCTCACCGTTTTTAGGGCGGCCGACAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009826 GO:0009987 GO:0010033 GO:0010941 GO:0014070 GO:0016043 GO:0016049 GO:0022603 GO:0023052 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0043207 GO:0043401 GO:0048519 GO:0048523 GO:0048545 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060548 GO:0060560 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071840 GO:0098542 GO:1901700 GO:1901701 GO:1905421 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bax1-I

Protein Analysis

245

Amino Acids

27.34

Weight (kDa)

8.84

Isoelectric Point (pI)

26.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bax1-I	PF01027	31 - 239	5.8e-48	Inhibitor of apoptosis-promoting Bax1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03070 AT1G03070 AT1G03070 AT3G63310 AT4G02690 AT4G02690
fragaria_vesca	FvH4_2g23060 FvH4_2g24870
malus_domestica	MD03G1259200.v1.1 MD11G1279800.v1.1
prunus_persica	Prupe.8G235700_v2.0.a1
pyrus_communis	pycom03g20700 pycom11g24750
rosa_chinensis	RchiOBHm_Chr6g0290161 RchiOBHm_Chr6g0292711
rosa_laevigata	RLG00000011997 RLG00000012236
rosa_multiflora	Rmu_co8443445.1_g000001 Rmu_sc0002902.1_g000017
rosa_roxburghii	Rroxscaffold_7G00174750 Rroxscaffold_7G00177280
rosa_rugosa	Rorug06G0210500 Rorug06G0229200
rosa_samantha	Rh6BG349700 Rh6DG321200
rosa_wichuraiana	Rw6G027730 Rw6G029870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	152, 203
AccII	CGCG	1 cut(s)	113
AccIII	TCCGGA	1 cut(s)	31
AciI	CCGC	6 cut(s)	50, 100, 260, 363, 533, 722
AclWI	GGATC	1 cut(s)	23
AcoI	YGGCCR	2 cut(s)	173, 723
AcsI	RAATTY	1 cut(s)	309
AcuI	CTGAAG	1 cut(s)	601
AcyI	GRCGYC	3 cut(s)	153, 204, 572
AfaI	GTAC	3 cut(s)	266, 425, 650
AfiI	CCNNNNNNNGG	6 cut(s)	38, 45, 84, 178, 304, 717
AgsI	TTSAA	1 cut(s)	460
AjnI	CCWGG	1 cut(s)	210
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AluBI	AGCT	3 cut(s)	82, 488, 701
AluI	AGCT	3 cut(s)	82, 488, 701
Alw21I	GWGCWC	2 cut(s)	84, 490
AlwI	GGATC	1 cut(s)	23
Ama87I	CYCGRG	2 cut(s)	68, 77
Aor13HI	TCCGGA	1 cut(s)	31
AoxI	GGCC	6 cut(s)	36, 47, 173, 208, 448, 723
ApeKI	GCWGC	2 cut(s)	437, 659
ApoI	RAATTY	1 cut(s)	309
AspLEI	GCGC	3 cut(s)	155, 206, 217
AspS9I	GGNCC	3 cut(s)	90, 169, 470
AsuHPI	GGTGA	2 cut(s)	382, 700
AvaI	CYCGRG	2 cut(s)	68, 77
AvaII	GGWCC	3 cut(s)	90, 169, 470
BaeGI	GKGCMC	1 cut(s)	260
BanI	GGYRCC	2 cut(s)	152, 203
BanII	GRGCYC	3 cut(s)	77, 84, 490
Bbv12I	GWGCWC	2 cut(s)	84, 490
BbvI	GCAGC	2 cut(s)	424, 646
BccI	CCATC	3 cut(s)	131, 149, 326
BceAI	ACGGC	2 cut(s)	140, 411
BciT130I	CCWGG	1 cut(s)	212
BfaI	CTAG	2 cut(s)	360, 698
BfmI	CTRYAG	2 cut(s)	147, 660
BfoI	RGCGCY	3 cut(s)	156, 207, 218
BglI	GCCNNNNNGGC	1 cut(s)	212
BisI	GCNGC	4 cut(s)	50, 438, 660, 723
BlsI	GCNGC	4 cut(s)	51, 439, 661, 724
Bme1390I	CCNGG	1 cut(s)	212
Bme18I	GGWCC	3 cut(s)	90, 169, 470
BmeT110I	CYCGRG	2 cut(s)	68, 77
BmgT120I	GGNCC	3 cut(s)	90, 169, 470
BmiI	GGNNCC	3 cut(s)	154, 205, 472
BmrFI	CCNGG	1 cut(s)	212
BmrI	ACTGGG	1 cut(s)	314
BmsI	GCATC	2 cut(s)	54, 292
BmuI	ACTGGG	1 cut(s)	314
Bsa29I	ATCGAT	1 cut(s)	623
BsaHI	GRCGYC	3 cut(s)	153, 204, 572
BsaWI	WCCGGW	3 cut(s)	31, 84, 286
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 45, 84, 178, 304, 717
Bse118I	RCCGGY	3 cut(s)	175, 200, 206
Bse1I	ACTGG	3 cut(s)	309, 330, 498
BseAI	TCCGGA	1 cut(s)	31
BseBI	CCWGG	1 cut(s)	212
BseCI	ATCGAT	1 cut(s)	623
BseGI	GGATG	3 cut(s)	96, 123, 283
BseLI	CCNNNNNNNGG	6 cut(s)	38, 45, 84, 178, 304, 717
BseMII	CTCAG	1 cut(s)	35
BseNI	ACTGG	3 cut(s)	309, 330, 498
BseSI	GKGCMC	1 cut(s)	260
BseX3I	CGGCCG	2 cut(s)	173, 723
BseXI	GCAGC	2 cut(s)	424, 646
Bsh1236I	CGCG	1 cut(s)	113
Bsh1285I	CGRYCG	3 cut(s)	117, 176, 726
BshFI	GGCC	6 cut(s)	38, 49, 175, 210, 450, 725
BshNI	GGYRCC	2 cut(s)	152, 203
BshVI	ATCGAT	1 cut(s)	623
BsiEI	CGRYCG	3 cut(s)	117, 176, 726
BsiHKAI	GWGCWC	2 cut(s)	84, 490
BsiHKCI	CYCGRG	2 cut(s)	68, 77
BsiSI	CCGG	8 cut(s)	32, 39, 85, 172, 176, 201, 207, 287
BslFI	GGGAC	1 cut(s)	456
BslI	CCNNNNNNNGG	6 cut(s)	38, 45, 84, 178, 304, 717
BsmFI	GGGAC	1 cut(s)	456
BsnI	GGCC	6 cut(s)	38, 49, 175, 210, 450, 725
BsoBI	CYCGRG	2 cut(s)	68, 77
Bsp1286I	GDGCHC	4 cut(s)	77, 84, 260, 490
Bsp13I	TCCGGA	1 cut(s)	31
Bsp1407I	TGTACA	1 cut(s)	423
Bsp143I	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
BspACI	CCGC	6 cut(s)	50, 100, 260, 363, 533, 722
BspANI	GGCC	6 cut(s)	38, 49, 175, 210, 450, 725
BspCNI	CTCAG	1 cut(s)	36
BspDI	ATCGAT	1 cut(s)	623
BspEI	TCCGGA	1 cut(s)	31
BspFNI	CGCG	1 cut(s)	113
BspLI	GGNNCC	3 cut(s)	154, 205, 472
BspMAI	CTGCAG	1 cut(s)	664
BspPI	GGATC	1 cut(s)	23
BspQI	GCTCTTC	1 cut(s)	708
BspT107I	GGYRCC	2 cut(s)	152, 203
BsrFI	RCCGGY	3 cut(s)	175, 200, 206
BsrGI	TGTACA	1 cut(s)	423
BsrI	ACTGG	3 cut(s)	309, 330, 498
BssAI	RCCGGY	3 cut(s)	175, 200, 206
BssMI	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
BssNI	GRCGYC	3 cut(s)	153, 204, 572
Bst2UI	CCWGG	1 cut(s)	212
Bst4CI	ACNGT	2 cut(s)	712, 731
Bst6I	CTCTTC	3 cut(s)	17, 698, 708
BstACI	GRCGYC	3 cut(s)	153, 204, 572
BstAUI	TGTACA	1 cut(s)	423
BstC8I	GCNNGC	2 cut(s)	208, 260
BstDEI	CTNAG	1 cut(s)	44
BstF5I	GGATG	3 cut(s)	96, 123, 283
BstFNI	CGCG	1 cut(s)	113
BstH2I	RGCGCY	3 cut(s)	156, 207, 218
BstHHI	GCGC	3 cut(s)	155, 206, 217
BstKTI	GATC	6 cut(s)	31, 117, 504, 579, 623, 627
BstMBI	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
BstMCI	CGRYCG	3 cut(s)	117, 176, 726
BstMWI	GCNNNNNNNGC	5 cut(s)	119, 143, 152, 212, 259
BstNI	CCWGG	1 cut(s)	212
BstSCI	CCNGG	1 cut(s)	210
BstSFI	CTRYAG	2 cut(s)	147, 660
BstSLI	GKGCMC	1 cut(s)	260
BstUI	CGCG	1 cut(s)	113
BstV1I	GCAGC	2 cut(s)	424, 646
BstXI	CCANNNNNNTGG	1 cut(s)	325
BstZI	CGGCCG	2 cut(s)	173, 723
Bsu15I	ATCGAT	1 cut(s)	623
BsuRI	GGCC	6 cut(s)	38, 49, 175, 210, 450, 725
BsuTUI	ATCGAT	1 cut(s)	623
BtgZI	GCGATG	1 cut(s)	127
BtsCI	GGATG	3 cut(s)	96, 123, 283
BtsI	GCAGTG	1 cut(s)	405
BtsIMutI	CAGTG	3 cut(s)	323, 405, 555
Cac8I	GCNNGC	2 cut(s)	208, 260
CfoI	GCGC	3 cut(s)	155, 206, 217
Cfr10I	RCCGGY	3 cut(s)	175, 200, 206
Cfr13I	GGNCC	3 cut(s)	90, 169, 470
ClaI	ATCGAT	1 cut(s)	623
CpoI	CGGWCCG	1 cut(s)	169
CseI	GACGC	1 cut(s)	561
Csp6I	GTAC	3 cut(s)	265, 424, 649
CspI	CGGWCCG	1 cut(s)	169
CviQI	GTAC	3 cut(s)	265, 424, 649
DdeI	CTNAG	1 cut(s)	44
DinI	GGCGCC	2 cut(s)	154, 205
DpnI	GATC	6 cut(s)	30, 116, 503, 578, 622, 626
DpnII	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
EaeI	YGGCCR	2 cut(s)	173, 723
EagI	CGGCCG	2 cut(s)	173, 723
Eam1104I	CTCTTC	3 cut(s)	17, 698, 708
EarI	CTCTTC	3 cut(s)	17, 698, 708
Ecl136II	GAGCTC	2 cut(s)	82, 488
EclXI	CGGCCG	2 cut(s)	173, 723
Eco24I	GRGCYC	3 cut(s)	77, 84, 490
Eco32I	GATATC	2 cut(s)	546, 682
Eco47I	GGWCC	3 cut(s)	90, 169, 470
Eco52I	CGGCCG	2 cut(s)	173, 723
Eco53kI	GAGCTC	2 cut(s)	82, 488
Eco57I	CTGAAG	1 cut(s)	601
Eco88I	CYCGRG	2 cut(s)	68, 77
EcoICRI	GAGCTC	2 cut(s)	82, 488
EcoRII	CCWGG	1 cut(s)	210
EcoRV	GATATC	2 cut(s)	546, 682
EcoT38I	GRGCYC	3 cut(s)	77, 84, 490
EgeI	GGCGCC	2 cut(s)	154, 205
EheI	GGCGCC	2 cut(s)	154, 205
FaiI	YATR	6 cut(s)	62, 559, 561, 581, 594, 603
FaqI	GGGAC	1 cut(s)	456
FauI	CCCGC	3 cut(s)	267, 356, 540
Fnu4HI	GCNGC	4 cut(s)	50, 438, 660, 723
FokI	GGATG	3 cut(s)	83, 110, 270
FriOI	GRGCYC	3 cut(s)	77, 84, 490
Fsp4HI	GCNGC	4 cut(s)	50, 438, 660, 723
FspBI	CTAG	2 cut(s)	360, 698
GlaI	GCGC	3 cut(s)	154, 205, 216
GluI	GCNGC	4 cut(s)	50, 438, 660, 723
HaeII	RGCGCY	3 cut(s)	156, 207, 218
HaeIII	GGCC	6 cut(s)	38, 49, 175, 210, 450, 725
HapII	CCGG	8 cut(s)	32, 39, 85, 172, 176, 201, 207, 287
HgaI	GACGC	1 cut(s)	561
HhaI	GCGC	3 cut(s)	155, 206, 217
Hin1I	GRCGYC	3 cut(s)	153, 204, 572
Hin6I	GCGC	3 cut(s)	153, 204, 215
HinP1I	GCGC	3 cut(s)	153, 204, 215
HinfI	GANTC	3 cut(s)	7, 380, 517
HpaII	CCGG	8 cut(s)	32, 39, 85, 172, 176, 201, 207, 287
HphI	GGTGA	2 cut(s)	382, 700
Hpy166II	GTNNAC	1 cut(s)	426
Hpy188I	TCNGA	7 cut(s)	21, 393, 417, 485, 501, 516, 620
Hpy188III	TCNNGA	2 cut(s)	32, 70
Hpy8I	GTNNAC	1 cut(s)	426
Hpy99I	CGWCG	5 cut(s)	161, 164, 341, 577, 647
HpyAV	CCTTC	3 cut(s)	103, 361, 484
HpyCH4III	ACNGT	2 cut(s)	712, 731
HpyCH4V	TGCA	3 cut(s)	353, 440, 662
HpyF10VI	GCNNNNNNNGC	5 cut(s)	119, 143, 152, 212, 259
HpyF3I	CTNAG	1 cut(s)	44
Hsp92I	GRCGYC	3 cut(s)	153, 204, 572
HspAI	GCGC	3 cut(s)	153, 204, 215
KasI	GGCGCC	2 cut(s)	152, 203
Kpn2I	TCCGGA	1 cut(s)	31
KroI	GCCGGC	1 cut(s)	206
KroNI	GCCGGC	1 cut(s)	208
Kzo9I	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
LguI	GCTCTTC	1 cut(s)	708
LmnI	GCTCC	2 cut(s)	87, 485
Lsp1109I	GCAGC	2 cut(s)	424, 646
LweI	GCATC	2 cut(s)	54, 292
MaeI	CTAG	2 cut(s)	360, 698
MalI	GATC	6 cut(s)	30, 116, 503, 578, 622, 626
MboI	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
MboII	GAAGA	4 cut(s)	34, 520, 685, 695
MhlI	GDGCHC	4 cut(s)	77, 84, 260, 490
MluCI	AATT	3 cut(s)	128, 292, 309
Mly113I	GGCGCC	2 cut(s)	153, 204
MlyI	GAGTC	1 cut(s)	389
MnlI	CCTC	4 cut(s)	28, 39, 440, 701
MroI	TCCGGA	1 cut(s)	31
MroNI	GCCGGC	1 cut(s)	206
MseI	TTAA	1 cut(s)	291
MspA1I	CMGCKG	1 cut(s)	262
MspI	CCGG	8 cut(s)	32, 39, 85, 172, 176, 201, 207, 287
MspR9I	CCNGG	1 cut(s)	212
MvaI	CCWGG	1 cut(s)	212
MvnI	CGCG	1 cut(s)	113
MwoI	GCNNNNNNNGC	5 cut(s)	119, 143, 152, 212, 259
NaeI	GCCGGC	1 cut(s)	208
NarI	GGCGCC	2 cut(s)	153, 204
NdeII	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
NgoMIV	GCCGGC	1 cut(s)	206
NlaIV	GGNNCC	3 cut(s)	154, 205, 472
PaeR7I	CTCGAG	1 cut(s)	68
PciSI	GCTCTTC	1 cut(s)	708
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PdiI	GCCGGC	1 cut(s)	208
PfeI	GAWTC	2 cut(s)	7, 517
PkrI	GCNGC	4 cut(s)	51, 439, 661, 724
Ple19I	CGATCG	1 cut(s)	117
PleI	GAGTC	1 cut(s)	388
PluTI	GGCGCC	2 cut(s)	156, 207
PpsI	GAGTC	1 cut(s)	388
Psp124BI	GAGCTC	2 cut(s)	84, 490
Psp6I	CCWGG	1 cut(s)	210
PspGI	CCWGG	1 cut(s)	210
PspN4I	GGNNCC	3 cut(s)	154, 205, 472
PspPI	GGNCC	3 cut(s)	90, 169, 470
PstI	CTGCAG	1 cut(s)	664
PvuI	CGATCG	1 cut(s)	117
RsaI	GTAC	3 cut(s)	266, 425, 650
RsaNI	GTAC	3 cut(s)	265, 424, 649
Rsr2I	CGGWCCG	1 cut(s)	169
RsrII	CGGWCCG	1 cut(s)	169
SacI	GAGCTC	2 cut(s)	84, 490
SapI	GCTCTTC	1 cut(s)	708
SaqAI	TTAA	1 cut(s)	291
SatI	GCNGC	4 cut(s)	50, 438, 660, 723
Sau3AI	GATC	6 cut(s)	28, 114, 501, 576, 620, 624
Sau96I	GGNCC	3 cut(s)	90, 169, 470
SchI	GAGTC	1 cut(s)	389
ScrFI	CCNGG	1 cut(s)	212
SduI	GDGCHC	4 cut(s)	77, 84, 260, 490
SetI	ASST	8 cut(s)	84, 300, 372, 422, 490, 525, 693, 703
SfaNI	GCATC	2 cut(s)	54, 292
SfcI	CTRYAG	2 cut(s)	147, 660
SfoI	GGCGCC	2 cut(s)	154, 205
Sfr274I	CTCGAG	1 cut(s)	68
SgrAI	CRCCGGYG	1 cut(s)	200
SinI	GGWCC	3 cut(s)	90, 169, 470
SlaI	CTCGAG	1 cut(s)	68
SmlI	CTYRAG	1 cut(s)	68
SmoI	CTYRAG	1 cut(s)	68
Sse9I	AATT	3 cut(s)	128, 292, 309
SsiI	CCGC	6 cut(s)	50, 100, 260, 363, 533, 722
SspDI	GGCGCC	2 cut(s)	152, 203
SspMI	CTAG	2 cut(s)	360, 698
SstI	GAGCTC	2 cut(s)	84, 490
StyD4I	CCNGG	1 cut(s)	210
TaaI	ACNGT	2 cut(s)	712, 731
TaqI	TCGA	3 cut(s)	69, 575, 623
TaqII	GACCGA	1 cut(s)	157
TasI	AATT	3 cut(s)	128, 292, 309
TatI	WGTACW	3 cut(s)	264, 423, 648
TauI	GCSGC	2 cut(s)	52, 725
TfiI	GAWTC	2 cut(s)	7, 517
Tru1I	TTAA	1 cut(s)	291
Tru9I	TTAA	1 cut(s)	291
TscAI	CASTG	3 cut(s)	330, 405, 555
TseI	GCWGC	2 cut(s)	437, 659
TspDTI	ATGAA	2 cut(s)	85, 235
TspGWI	ACGGA	1 cut(s)	623
TspRI	CASTG	3 cut(s)	330, 405, 555
VpaK11BI	GGWCC	3 cut(s)	90, 169, 470
XapI	RAATTY	1 cut(s)	309
XhoI	CTCGAG	1 cut(s)	68
XspI	CTAG	2 cut(s)	360, 698

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.