pycom14g16140

Homeobox-leucine zipper protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
18538873 .. 18540443
1571 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g16140.2

Sequence Viewer

Length: 1029 bp
ATGGCCGGCGGGAGGGTCTACGGCGGCCGAAATTCGTCCGTCCTCAGTGCTTTGCTTCAGAACCAGAAGAGTTCTGAGCCTCTTGATTCTCTTTTCCTTTCTGGGTCATCAAATTCTTCCTCTTCTTCTTTTCTGGGTTCAAGATCGATGGTGAGTTTCGAAGATGTTCGCGGAGGAAGTGGATTGAATAGGTCATTGTTCCACCAGTATGAGCACGAAGATAACGGGGAAGATGACTTGGATGAGTATCCCCATCAACCTGGGAAGAAGAGGCGGCTAACCGCTGATCAAGTCCGGTTTCTCGAAAAAAGCTTTGATGTGGAAAACAAGCTGGAACCAGAGAGGAAAGTCCTGCTTGCAAAGGACCTTGGCTTGCAGCCTCGGCAGGTTGCGATATGGTTCCAGAACCGCCGGGCGAGGTGGAAGACAAAACACCTTGAGAAGGATTATGAGGTGCTGCAAGCCAACTACAATAATCTCAAGGCTAACTGTGAAAGCCTTTCGAAAGAGAATGATAAACTGAAGGCCGAGGTTCTTGTCCTCTCAGACAAGCTGCAACTCAAAGAGAAAGTGAGAGGAAATTCAGAACTATCTGATACCAACCAATTGTCTCAAGAACCGCCGCACAAGCCAATTGCTGACTCGGCCTCGGAAGGCGAAGTATCAAAAGTCTCAGCTGTGGCCTCTAAGCAGGAAGATCATAGTTCAGGCAGGAGTGATATATTTGATTCAGACAGCCCACATTACACGGATGGAGTTCACTCTTCACTCATGGAGCCTGGTGATTCTTCGTACGTTCTCGAACCTGAGCAGTCTGACCTTTCCCAAGATGAAGAAGATAACTTCAGCAAAAGCCTGCTGCCTCCATACATCTTCCCAAAGCTTGAAGATGTCGATTACTCCGATACGCCTGCAAATTCCTGTAATTTCGGATTCCCGGTGGAAGATCGATCAATGCCTTTTGGTCCTGGTCTTACTAAGTTTCTTCTGCAAAATTCGAATTCCCGGGTTATTATCTTCTTGTTTTAA

Protein Analysis

343

Amino Acids

38.3

Weight (kDa)

5.06

Isoelectric Point (pI)

55.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 376
AccI GTMKAC 1 cut(s) 18
AccII CGCG 1 cut(s) 171
AciI CCGC 8 cut(s) 9, 24, 171, 274, 282, 409, 620, 623
AcoI YGGCCR 2 cut(s) 3, 25
AcsI RAATTY 6 cut(s) 31, 112, 580, 916, 994, 1000
AcuI CTGAAG 3 cut(s) 41, 542, 829
AfaI GTAC 1 cut(s) 794
AfiI CCNNNNNNNGG 2 cut(s) 12, 442
AgsI TTSAA 3 cut(s) 141, 187, 887
AjnI CCWGG 3 cut(s) 259, 778, 967
AluBI AGCT 5 cut(s) 312, 331, 553, 677, 883
AluI AGCT 5 cut(s) 312, 331, 553, 677, 883
Alw21I GWGCWC 1 cut(s) 216
Alw26I GTCTC 2 cut(s) 615, 676
Ama87I CYCGRG 1 cut(s) 1005
AoxI GGCC 5 cut(s) 3, 25, 525, 645, 681
ApeKI GCWGC 4 cut(s) 376, 457, 553, 859
ApoI RAATTY 6 cut(s) 31, 112, 580, 916, 994, 1000
Asp700I GAANNNNTTC 1 cut(s) 165
AspS9I GGNCC 2 cut(s) 364, 965
AsuC2I CCSGG 4 cut(s) 413, 938, 1006, 1007
AsuHPI GGTGA 2 cut(s) 163, 794
AsuII TTCGAA 3 cut(s) 159, 503, 998
AvaI CYCGRG 1 cut(s) 1005
AvaII GGWCC 2 cut(s) 364, 965
BbsI GAAGAC 1 cut(s) 431
Bbv12I GWGCWC 1 cut(s) 216
BbvI GCAGC 4 cut(s) 388, 444, 540, 846
BccI CCATC 3 cut(s) 142, 261, 746
BceAI ACGGC 1 cut(s) 37
BcgI CGANNNNNNTGC 2 cut(s) 893, 927
BciT130I CCWGG 3 cut(s) 261, 780, 969
BciVI GTATCC 1 cut(s) 258
BclI TGATCA 1 cut(s) 286
BcnI CCSGG 4 cut(s) 413, 938, 1006, 1007
BcoDI GTCTC 2 cut(s) 615, 676
BfuAI ACCTGC 1 cut(s) 376
BfuI GTATCC 1 cut(s) 258
BisI GCNGC 7 cut(s) 25, 275, 377, 458, 554, 623, 860
BlsI GCNGC 7 cut(s) 26, 276, 378, 459, 555, 624, 861
Bme1390I CCNGG 7 cut(s) 261, 413, 780, 938, 969, 1006, 1007
Bme18I GGWCC 2 cut(s) 364, 965
BmeT110I CYCGRG 1 cut(s) 1005
BmgT120I GGNCC 2 cut(s) 364, 965
BmiI GGNNCC 3 cut(s) 336, 401, 777
BmrFI CCNGG 7 cut(s) 261, 413, 780, 938, 969, 1006, 1007
BpiI GAAGAC 1 cut(s) 431
Bpu10I CCTNAGC 1 cut(s) 807
Bpu14I TTCGAA 3 cut(s) 159, 503, 998
BpuEI CTTGAG 3 cut(s) 458, 464, 597
BpuMI CCSGG 4 cut(s) 413, 938, 1006, 1007
Bsa29I ATCGAT 2 cut(s) 146, 949
BsaBI GATNNNNATC 1 cut(s) 246
BsaJI CCNNGG 6 cut(s) 260, 367, 380, 528, 648, 1005
BsaWI WCCGGW 1 cut(s) 294
Bsc4I CCNNNNNNNGG 2 cut(s) 12, 442
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 1 cut(s) 205
Bse8I GATNNNNATC 1 cut(s) 246
BseBI CCWGG 3 cut(s) 261, 780, 969
BseCI ATCGAT 2 cut(s) 146, 949
BseDI CCNNGG 6 cut(s) 260, 367, 380, 528, 648, 1005
BseGI GGATG 2 cut(s) 247, 757
BseJI GATNNNNATC 1 cut(s) 246
BseLI CCNNNNNNNGG 2 cut(s) 12, 442
BseMII CTCAG 5 cut(s) 58, 66, 558, 687, 798
BseNI ACTGG 1 cut(s) 205
BseX3I CGGCCG 1 cut(s) 25
BseXI GCAGC 4 cut(s) 388, 444, 540, 846
Bsh1236I CGCG 1 cut(s) 171
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 5 cut(s) 5, 27, 527, 647, 683
BshVI ATCGAT 2 cut(s) 146, 949
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 216
BsiHKCI CYCGRG 1 cut(s) 1005
BsiSI CCGG 5 cut(s) 6, 295, 412, 938, 1006
BsiWI CGTACG 1 cut(s) 792
BslI CCNNNNNNNGG 2 cut(s) 12, 442
BsmAI GTCTC 2 cut(s) 615, 676
BsnI GGCC 5 cut(s) 5, 27, 527, 647, 683
BsoBI CYCGRG 1 cut(s) 1005
Bsp119I TTCGAA 3 cut(s) 159, 503, 998
Bsp1286I GDGCHC 1 cut(s) 216
Bsp143I GATC 5 cut(s) 143, 286, 697, 946, 950
BspACI CCGC 8 cut(s) 9, 24, 171, 274, 282, 409, 620, 623
BspANI GGCC 5 cut(s) 5, 27, 527, 647, 683
BspCNI CTCAG 5 cut(s) 57, 67, 557, 686, 799
BspDI ATCGAT 2 cut(s) 146, 949
BspFNI CGCG 1 cut(s) 171
BspLI GGNNCC 3 cut(s) 336, 401, 777
BspMI ACCTGC 1 cut(s) 376
BspT104I TTCGAA 3 cut(s) 159, 503, 998
BsrFI RCCGGY 1 cut(s) 5
BsrI ACTGG 1 cut(s) 205
BssAI RCCGGY 1 cut(s) 5
BssECI CCNNGG 6 cut(s) 260, 367, 380, 528, 648, 1005
BssMI GATC 5 cut(s) 143, 286, 697, 946, 950
BssT1I CCWWGG 1 cut(s) 367
Bst2UI CCWGG 3 cut(s) 261, 780, 969
Bst4CI ACNGT 1 cut(s) 491
Bst6I CTCTTC 4 cut(s) 62, 127, 263, 769
BstBI TTCGAA 3 cut(s) 159, 503, 998
BstC8I GCNNGC 6 cut(s) 7, 357, 374, 462, 857, 912
BstDEI CTNAG 7 cut(s) 44, 75, 544, 673, 687, 807, 978
BstENI CCTNNNNNAGG 1 cut(s) 440
BstF5I GGATG 2 cut(s) 247, 757
BstFNI CGCG 1 cut(s) 171
BstKTI GATC 5 cut(s) 146, 289, 700, 949, 953
BstMAI GTCTC 2 cut(s) 615, 676
BstMBI GATC 5 cut(s) 143, 286, 697, 946, 950
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 3 cut(s) 382, 628, 644
BstNI CCWGG 3 cut(s) 261, 780, 969
BstSCI CCNGG 7 cut(s) 259, 411, 778, 936, 967, 1004, 1005
BstUI CGCG 1 cut(s) 171
BstV1I GCAGC 4 cut(s) 388, 444, 540, 846
BstV2I GAAGAC 1 cut(s) 431
BstXI CCANNNNNNTGG 1 cut(s) 260
BstZI CGGCCG 1 cut(s) 25
Bsu15I ATCGAT 2 cut(s) 146, 949
BsuI GTATCC 1 cut(s) 258
BsuRI GGCC 5 cut(s) 5, 27, 527, 647, 683
BsuTUI ATCGAT 2 cut(s) 146, 949
BtsCI GGATG 2 cut(s) 247, 757
BtsIMutI CAGTG 1 cut(s) 52
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 6 cut(s) 7, 357, 374, 462, 857, 912
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 2 cut(s) 364, 965
Cfr9I CCCGGG 1 cut(s) 1005
ClaI ATCGAT 2 cut(s) 146, 949
Csp6I GTAC 1 cut(s) 793
CviAII CATG 1 cut(s) 772
CviQI GTAC 1 cut(s) 793
DdeI CTNAG 7 cut(s) 44, 75, 544, 673, 687, 807, 978
DpnI GATC 5 cut(s) 145, 288, 699, 948, 952
DpnII GATC 5 cut(s) 143, 286, 697, 946, 950
EaeI YGGCCR 2 cut(s) 3, 25
EagI CGGCCG 1 cut(s) 25
Eam1104I CTCTTC 4 cut(s) 62, 127, 263, 769
EarI CTCTTC 4 cut(s) 62, 127, 263, 769
EclXI CGGCCG 1 cut(s) 25
Eco130I CCWWGG 1 cut(s) 367
Eco47I GGWCC 2 cut(s) 364, 965
Eco52I CGGCCG 1 cut(s) 25
Eco57I CTGAAG 3 cut(s) 41, 542, 829
Eco88I CYCGRG 1 cut(s) 1005
EcoNI CCTNNNNNAGG 1 cut(s) 440
EcoO109I RGGNCCY 1 cut(s) 364
EcoRI GAATTC 1 cut(s) 1000
EcoRII CCWGG 3 cut(s) 259, 778, 967
EcoT14I CCWWGG 1 cut(s) 367
ErhI CCWWGG 1 cut(s) 367
FaeI CATG 1 cut(s) 775
FaiI YATR 7 cut(s) 210, 397, 450, 702, 722, 773, 868
FalI AAGNNNNNCTT 2 cut(s) 339, 371
FatI CATG 1 cut(s) 771
FauI CCCGC 1 cut(s) 2
FbaI TGATCA 1 cut(s) 286
FblI GTMKAC 1 cut(s) 18
Fnu4HI GCNGC 7 cut(s) 25, 275, 377, 458, 554, 623, 860
FokI GGATG 2 cut(s) 254, 764
Fsp4HI GCNGC 7 cut(s) 25, 275, 377, 458, 554, 623, 860
GluI GCNGC 7 cut(s) 25, 275, 377, 458, 554, 623, 860
HaeIII GGCC 5 cut(s) 5, 27, 527, 647, 683
HapII CCGG 5 cut(s) 6, 295, 412, 938, 1006
Hin1II CATG 1 cut(s) 775
HindIII AAGCTT 2 cut(s) 310, 881
HinfI GANTC 5 cut(s) 86, 641, 728, 785, 933
HpaII CCGG 5 cut(s) 6, 295, 412, 938, 1006
HphI GGTGA 2 cut(s) 163, 794
Hpy166II GTNNAC 2 cut(s) 19, 760
Hpy188III TCNNGA 6 cut(s) 83, 141, 302, 403, 614, 800
Hpy8I GTNNAC 2 cut(s) 19, 760
HpyAV CCTTC 3 cut(s) 436, 517, 647
HpyCH4III ACNGT 1 cut(s) 491
HpyCH4IV ACGT 1 cut(s) 795
HpyCH4V TGCA 6 cut(s) 359, 376, 460, 556, 914, 991
HpyF10VI GCNNNNNNNGC 3 cut(s) 382, 628, 644
HpyF3I CTNAG 7 cut(s) 44, 75, 544, 673, 687, 807, 978
HpySE526I ACGT 1 cut(s) 795
Hsp92II CATG 1 cut(s) 775
KroI GCCGGC 1 cut(s) 5
KroNI GCCGGC 1 cut(s) 7
Ksp22I TGATCA 1 cut(s) 286
Kzo9I GATC 5 cut(s) 143, 286, 697, 946, 950
LmnI GCTCC 1 cut(s) 775
Lsp1109I GCAGC 4 cut(s) 388, 444, 540, 846
MaeII ACGT 1 cut(s) 795
MalI GATC 5 cut(s) 145, 288, 699, 948, 952
MboI GATC 5 cut(s) 143, 286, 697, 946, 950
MfeI CAATTG 2 cut(s) 605, 633
MhlI GDGCHC 1 cut(s) 216
MluCI AATT 9 cut(s) 31, 112, 580, 605, 633, 916, 925, 994, 1000
MlyI GAGTC 1 cut(s) 635
MroNI GCCGGC 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 165
MseI TTAA 1 cut(s) 1027
MslI CAYNNNNRTG 1 cut(s) 207
MspA1I CMGCKG 2 cut(s) 284, 677
MspI CCGG 5 cut(s) 6, 295, 412, 938, 1006
MspR9I CCNGG 7 cut(s) 261, 413, 780, 938, 969, 1006, 1007
MunI CAATTG 2 cut(s) 605, 633
MvaI CCWGG 3 cut(s) 261, 780, 969
MvnI CGCG 1 cut(s) 171
MwoI GCNNNNNNNGC 3 cut(s) 382, 628, 644
NaeI GCCGGC 1 cut(s) 7
NciI CCSGG 4 cut(s) 413, 938, 1006, 1007
NdeII GATC 5 cut(s) 143, 286, 697, 946, 950
NgoMIV GCCGGC 1 cut(s) 5
NlaIII CATG 1 cut(s) 775
NlaIV GGNNCC 3 cut(s) 336, 401, 777
NmeAIII GCCGAG 3 cut(s) 361, 553, 623
NspV TTCGAA 3 cut(s) 159, 503, 998
PcsI WCGNNNNNNNCGW 1 cut(s) 900
PdiI GCCGGC 1 cut(s) 7
PdmI GAANNNNTTC 1 cut(s) 165
PfeI GAWTC 4 cut(s) 86, 728, 785, 933
Pfl23II CGTACG 1 cut(s) 792
PkrI GCNGC 7 cut(s) 26, 276, 378, 459, 555, 624, 861
PleI GAGTC 1 cut(s) 635
PpsI GAGTC 1 cut(s) 635
PpuMI RGGWCCY 1 cut(s) 364
Psp5II RGGWCCY 1 cut(s) 364
Psp6I CCWGG 3 cut(s) 259, 778, 967
PspGI CCWGG 3 cut(s) 259, 778, 967
PspLI CGTACG 1 cut(s) 792
PspN4I GGNNCC 3 cut(s) 336, 401, 777
PspPI GGNCC 2 cut(s) 364, 965
PspPPI RGGWCCY 1 cut(s) 364
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 1 cut(s) 794
RsaNI GTAC 1 cut(s) 793
RseI CAYNNNNRTG 1 cut(s) 207
SaqAI TTAA 1 cut(s) 1027
SatI GCNGC 7 cut(s) 25, 275, 377, 458, 554, 623, 860
Sau3AI GATC 5 cut(s) 143, 286, 697, 946, 950
Sau96I GGNCC 2 cut(s) 364, 965
SchI GAGTC 1 cut(s) 635
ScrFI CCNGG 7 cut(s) 261, 413, 780, 938, 969, 1006, 1007
SduI GDGCHC 1 cut(s) 216
SfuI TTCGAA 3 cut(s) 159, 503, 998
SinI GGWCC 2 cut(s) 364, 965
SmaI CCCGGG 1 cut(s) 1007
SmiMI CAYNNNNRTG 1 cut(s) 207
SmlI CTYRAG 3 cut(s) 437, 479, 612
SmoI CTYRAG 3 cut(s) 437, 479, 612
Sse9I AATT 9 cut(s) 31, 112, 580, 605, 633, 916, 925, 994, 1000
SsiI CCGC 8 cut(s) 9, 24, 171, 274, 282, 409, 620, 623
StyD4I CCNGG 7 cut(s) 259, 411, 778, 936, 967, 1004, 1005
StyI CCWWGG 1 cut(s) 367
TaaI ACNGT 1 cut(s) 491
TaiI ACGT 1 cut(s) 798
TaqI TCGA 8 cut(s) 146, 159, 303, 503, 801, 894, 949, 998
TasI AATT 9 cut(s) 31, 112, 580, 605, 633, 916, 925, 994, 1000
TauI GCSGC 3 cut(s) 27, 277, 625
TfiI GAWTC 4 cut(s) 86, 728, 785, 933
Tru1I TTAA 1 cut(s) 1027
Tru9I TTAA 1 cut(s) 1027
TscAI CASTG 1 cut(s) 52
TseI GCWGC 4 cut(s) 376, 457, 553, 859
TspDTI ATGAA 1 cut(s) 846
TspGWI ACGGA 2 cut(s) 28, 764
TspMI CCCGGG 1 cut(s) 1005
TspRI CASTG 1 cut(s) 52
VpaK11BI GGWCC 2 cut(s) 364, 965
XagI CCTNNNNNAGG 1 cut(s) 440
XapI RAATTY 6 cut(s) 31, 112, 580, 916, 994, 1000
XmaI CCCGGG 1 cut(s) 1005
XmiI GTMKAC 1 cut(s) 18
XmnI GAANNNNTTC 1 cut(s) 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.