Rh4BG392300

Homeobox-leucine zipper protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
54469623 .. 54470000
378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG392300.1

Sequence Viewer

Length: 378 bp
ATGGATATCCAAAATGCCATTCCAAATAATACTGCTGATGTTTATGTGCCGATTATGGTATGCAAGCAAGAAGATGCAAGTTCTGCCAAAAGTGATGTGTTTGACTCAGATAGTCCACATTGCACTGAAAACCATTCATTGTTGTTAGAGCCCACTACAACTGCTGATTCCTCTCATGGATTCGAACCTGCTGATCACTCAGATTTCTCACAAGATAATGAAGATGACAACAGCCTCACCAGAAGCCTTTTGCATTTGCCCCCACCTTGCTTTTTAAAACTCGAAGACATCTACTATGATGATCCCCCTGCAATTTCTAGTAGTTTCGGATTAATCCCAGTAGAAGATCAGCATCCTTTTGGTTTTTGGCCCTACTGA

Protein Analysis

125

Amino Acids

13.91

Weight (kDa)

4.06

Isoelectric Point (pI)

57.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 196
AclWI GGATC 1 cut(s) 296
AjuI GAANNNNNNNTTGG 1 cut(s) 35
AlwI GGATC 1 cut(s) 296
AoxI GGCC 1 cut(s) 368
AseI ATTAAT 1 cut(s) 332
AspS9I GGNCC 1 cut(s) 369
AsuHPI GGTGA 1 cut(s) 229
AsuII TTCGAA 1 cut(s) 183
BanII GRGCYC 1 cut(s) 153
BbsI GAAGAC 1 cut(s) 291
BclI TGATCA 1 cut(s) 193
BfaI CTAG 1 cut(s) 318
BfuAI ACCTGC 1 cut(s) 196
BmgT120I GGNCC 1 cut(s) 369
BmrI ACTGGG 1 cut(s) 332
BmsI GCATC 2 cut(s) 64, 361
BmuI ACTGGG 1 cut(s) 332
BpiI GAAGAC 1 cut(s) 291
Bpu14I TTCGAA 1 cut(s) 183
BsaBI GATNNNNATC 1 cut(s) 351
Bse1I ACTGG 1 cut(s) 338
Bse3DI GCAATG 1 cut(s) 118
Bse8I GATNNNNATC 1 cut(s) 351
BseGI GGATG 1 cut(s) 352
BseJI GATNNNNATC 1 cut(s) 351
BseMI GCAATG 1 cut(s) 118
BseMII CTCAG 2 cut(s) 120, 213
BseNI ACTGG 1 cut(s) 338
BshFI GGCC 1 cut(s) 370
BsnI GGCC 1 cut(s) 370
Bsp119I TTCGAA 1 cut(s) 183
Bsp1286I GDGCHC 1 cut(s) 153
Bsp143I GATC 3 cut(s) 193, 301, 346
BspANI GGCC 1 cut(s) 370
BspCNI CTCAG 2 cut(s) 119, 212
BspMI ACCTGC 1 cut(s) 196
BspPI GGATC 1 cut(s) 296
BspT104I TTCGAA 1 cut(s) 183
BsrDI GCAATG 1 cut(s) 118
BsrI ACTGG 1 cut(s) 338
BssMI GATC 3 cut(s) 193, 301, 346
BstAPI GCANNNNNTGC 1 cut(s) 83
BstBI TTCGAA 1 cut(s) 183
BstC8I GCNNGC 1 cut(s) 65
BstDEI CTNAG 2 cut(s) 106, 199
BstF5I GGATG 1 cut(s) 352
BstKTI GATC 3 cut(s) 196, 304, 349
BstMBI GATC 3 cut(s) 193, 301, 346
BstMWI GCNNNNNNNGC 1 cut(s) 83
BstV2I GAAGAC 1 cut(s) 291
BsuRI GGCC 1 cut(s) 370
BtsCI GGATG 1 cut(s) 352
BtsIMutI CAGTG 1 cut(s) 123
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 1 cut(s) 65
Cfr13I GGNCC 1 cut(s) 369
CviAII CATG 1 cut(s) 176
CviJI RGCY 4 cut(s) 151, 234, 246, 370
CviKI_1 RGCY 4 cut(s) 151, 234, 246, 370
DdeI CTNAG 2 cut(s) 106, 199
DpnI GATC 3 cut(s) 195, 303, 348
DpnII GATC 3 cut(s) 193, 301, 346
DraI TTTAAA 1 cut(s) 276
Eco24I GRGCYC 1 cut(s) 153
Eco32I GATATC 1 cut(s) 7
EcoRV GATATC 1 cut(s) 7
EcoT38I GRGCYC 1 cut(s) 153
FaeI CATG 1 cut(s) 179
FaiI YATR 5 cut(s) 45, 56, 61, 177, 297
FatI CATG 1 cut(s) 175
FbaI TGATCA 1 cut(s) 193
FokI GGATG 1 cut(s) 339
FriOI GRGCYC 1 cut(s) 153
FspBI CTAG 1 cut(s) 318
HaeIII GGCC 1 cut(s) 370
Hin1II CATG 1 cut(s) 179
HinfI GANTC 3 cut(s) 104, 167, 180
HphI GGTGA 1 cut(s) 229
Hpy166II GTNNAC 1 cut(s) 116
Hpy188I TCNGA 3 cut(s) 109, 202, 329
Hpy8I GTNNAC 1 cut(s) 116
HpyCH4V TGCA 5 cut(s) 63, 77, 123, 253, 311
HpyF10VI GCNNNNNNNGC 1 cut(s) 83
HpyF3I CTNAG 2 cut(s) 106, 199
Hsp92II CATG 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 3 cut(s) 193, 301, 346
LpnPI CCDG 4 cut(s) 201, 253, 321, 351
LweI GCATC 2 cut(s) 64, 361
MaeI CTAG 1 cut(s) 318
MalI GATC 3 cut(s) 195, 303, 348
MboI GATC 3 cut(s) 193, 301, 346
MboII GAAGA 4 cut(s) 83, 233, 296, 356
MhlI GDGCHC 1 cut(s) 153
MluCI AATT 1 cut(s) 312
MlyI GAGTC 1 cut(s) 98
MnlI CCTC 2 cut(s) 181, 245
MseI TTAA 2 cut(s) 275, 332
MwoI GCNNNNNNNGC 1 cut(s) 83
NdeII GATC 3 cut(s) 193, 301, 346
NlaIII CATG 1 cut(s) 179
NspV TTCGAA 1 cut(s) 183
PfeI GAWTC 2 cut(s) 167, 180
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
PshBI ATTAAT 1 cut(s) 332
PspPI GGNCC 1 cut(s) 369
SaqAI TTAA 2 cut(s) 275, 332
Sau3AI GATC 3 cut(s) 193, 301, 346
Sau96I GGNCC 1 cut(s) 369
SchI GAGTC 1 cut(s) 98
SduI GDGCHC 1 cut(s) 153
SetI ASST 2 cut(s) 190, 268
SfaNI GCATC 2 cut(s) 64, 361
SfuI TTCGAA 1 cut(s) 183
Sse9I AATT 1 cut(s) 312
SspMI CTAG 1 cut(s) 318
TaqI TCGA 2 cut(s) 183, 282
TasI AATT 1 cut(s) 312
TfiI GAWTC 2 cut(s) 167, 180
Tru1I TTAA 2 cut(s) 275, 332
Tru9I TTAA 2 cut(s) 275, 332
TscAI CASTG 1 cut(s) 130
TspDTI ATGAA 2 cut(s) 126, 234
TspRI CASTG 1 cut(s) 130
VspI ATTAAT 1 cut(s) 332
XspI CTAG 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.