Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0006789

Physical Location & Seq

Genomic Coordinates Forward (+)

19237656 .. 19242549

Gene Structure 4894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g17190.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

ATGGAGATCACAGAAGAACAAAGAAGACGAGCCGAAGCGAATCGATTAGCAGCACTAGCGAAACGTAAAGCGCTGATCGAATCCGAATCCTCCAATCTTCAACAACAGCAGCAAAACCCGTGGTCACTCTTCAAGTGCCGAAAGATTTCTCCCGACCTCACCCCAAGCTCCACGCATTGCATCCCCGATCCGAGACCCGAAACTTCCCGGGTCAAACCGGTTCCGGATATCCAATTTCCAGCGAGGTTCCGTGTCAGGCTCGAAATCTGCTCCCCGGACTCCTTCTCAGCCACCCCAGTTGCCGTAAAAGGGTTTGCATTTCCGGGGCAGGAGGAGTGCTTAAGGAGACTAAGTGATTGCTTGGCTAATGTCATGCCATCCCATTACACGCAAAATCATGGTGGTGGAAAGGCCGGTGTTTATAAGCTGAGTGATTACAGTGCCGTCTTGAAATGTCTAAGAAGCAGCAAGAGCATTGACACCGAAGAGATACCTTGGGGCACTCTTAATGTTGTAGAGAGACTTTCACATTCTTTTGTTGCGGGAAAATGGATACCATGCAGGCCAGAACACTTGTCGGACGAAATGGTTGATGAGTTCATTGGGAAGCTACCGAAGAAGCTGTTAGATGCACTTTTGCCTTTCCAACATGAGGGTGTTAGATTTGGTTTGCAGAGAGGTGGACGATGTCTTATTGCAGATGAAATGGGCCTTGGAAAGACACTCCAGGCTATTGCTATTGCAAGCTGTTTCATGCATGAAGGTTCCATACTTGTTGTTTGCCCTGCCATTTTGCGTTACTCTTGGGCAGAAGAACTAGAGCGGTGGCTTCCGTTTTGCTTGCCAGCTGACATCCATCTAGTATTTGGTCATGAAAACAATCCTGCCAATTTAAAGAGATGGCCCAGAGTTGTGGTTATTTCTTACACAATGCTCCACCGGTTGCATAAGAGCATGCTTGAACGAGAATGGGCTCTCTTAGTTGTTGATGAATCCCACCACATACGATGTACCAAGAAATCATCAGAACCTAGAGAGATAAAAGCTGTTCTTGACATTGCAACAAGGGTCAAGCGCATAGTTTTGCTATCTGGAACACCTTCTTTGTCAAGGCCGTATGACATTTTTCATCAGATAGATATGTTATGGCCTGGTTTGCTGGGAAAAGACAAGTATGACTTTGCCAAAACTTACTGTGATGTCAAATATATCCACGGTGTTCAAGGGAAAACTTTTCAGGATTTCTCTAAGGGCACTCGTTTGGAGGAGTTGAACATGTTACTGAAGCAAACGGTTATGATAAGACGCTTGAAGGAACATGTCCTGGTTCAGCTACCACCCAAACGCCGGCAGATTATACAAGTAGTACTGAAGAAATCAGATATAGCTTCAGCAATAGCTGCTGTCAGGGTGGGAAGAAGTGCCACTAAGAATGCATATTCAGAAAATTTGGATGAACCAAATGATAGTGAGGGTTGCTGCAGATCAGGGCAACTTTCCTACCAAGAATTAGGTATTGCAAAGCTAGCTGGGTTTCGGGAATGGCTCTCCTTTCATCCGCTCATTGGAGAATCAGATGGTGTTGCAAACTTGGAATCAGATTCCAGTTCTCACAAAATGTTAATATTTGCGCATCACCATAAAGTACTTGACGGATTACAGGAGTTCATATGCGAGAAAGGGATTACTTTTGTCCGAATTGATGGAAATACACTTGCCGCAGATAGGCAGGAAGCTGTACAATCATTCCAATTATCTACCGAGGTCAAGATTGCAATAATTGGTATTACTGCTGGAGGTGTTGGCCTTGATTTCTCATCAGCAAAGCATGTTGTGTTCTTGGAACTGCCTCAGTCTCCATCGTTGATGCTTCAGGCTGAGGATAGAGCTCACAGGAGAGGGCAAACAAATGCAGTCAACATATACATATTTTGCGGAAAGGTGCTTGTTTCTTTTGTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000228 GO:0000733 GO:0003674 GO:0003676 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0031297 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031593 GO:0031974 GO:0031981 GO:0032392 GO:0033554 GO:0034641 GO:0034645 GO:0036292 GO:0036310 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048478 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070530 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097617 GO:0140030 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HNH Helicase_C SNF2_N

Protein Analysis

655

Amino Acids

73.54

Weight (kDa)

8.76

Isoelectric Point (pI)

53.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07810
fragaria_vesca	FvH4_5g14341 FvH4_5g14341 FvH4_5g14341 FvH4_5g14341
malus_domestica	MD14G1208200.v1.1
prunus_persica	Prupe.5G200300_v2.0.a1
pyrus_communis	pycom14g17190 pycom14g17200
rosa_chinensis	RchiOBHm_Chr7g0182391
rosa_laevigata	RLG00000005127
rosa_multiflora	Rmu_co8327751.1_g000001 Rmu_sc0000003.1_g000001 Rmu_sc0034215.1_g000001 Rmu_sc0034216.1_g000001 Rmu_sc0037577.1_g000004 Rmu_sc0037929.1_g000001 Rmu_ssc0000034.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271270
rosa_rugosa	Rorug06G0447100
rosa_samantha	Rh7AG050500 Rh7BG050300 Rh7CG051800 Rh7CG051900 Rh7DG049600
rosa_wichuraiana	Rw7G004130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	423
Acc16I	TGCGCA	1 cut(s)	1632
AccBSI	CCGCTC	2 cut(s)	823, 1561
AccIII	TCCGGA	1 cut(s)	223
AciI	CCGC	5 cut(s)	542, 823, 1559, 1719, 1935
AclWI	GGATC	1 cut(s)	182
AcsI	RAATTY	1 cut(s)	1447
AcuI	CTGAAG	4 cut(s)	1304, 1374, 1391, 1856
AfaI	GTAC	4 cut(s)	1012, 1368, 1647, 1740
AfeI	AGCGCT	1 cut(s)	72
AfiI	CCNNNNNNNGG	5 cut(s)	309, 652, 1347, 1565, 1725
AflII	CTTAAG	1 cut(s)	340
AflIII	ACRYGT	2 cut(s)	1275, 1318
AgeI	ACCGGT	2 cut(s)	217, 939
AgsI	TTSAA	7 cut(s)	101, 133, 451, 962, 1223, 1273, 1312
AjnI	CCWGG	3 cut(s)	726, 1150, 1323
AjuI	GAANNNNNNNTTGG	2 cut(s)	696, 728
Alw21I	GWGCWC	1 cut(s)	1891
Alw26I	GTCTC	4 cut(s)	187, 340, 514, 1860
AlwI	GGATC	1 cut(s)	182
Ama87I	CYCGRG	1 cut(s)	207
Aor13HI	TCCGGA	1 cut(s)	223
Aor51HI	AGCGCT	1 cut(s)	72
AoxI	GGCC	7 cut(s)	411, 563, 709, 902, 1112, 1148, 1804
ApeKI	GCWGC	5 cut(s)	50, 109, 465, 1400, 1479
ApoI	RAATTY	1 cut(s)	1447
AsiGI	ACCGGT	2 cut(s)	217, 939
Asp700I	GAANNNNTTC	2 cut(s)	145, 1099
AspLEI	GCGC	3 cut(s)	73, 1077, 1633
AspS9I	GGNCC	2 cut(s)	709, 903
AsuC2I	CCSGG	4 cut(s)	208, 209, 275, 324
AsuHPI	GGTGA	2 cut(s)	151, 1628
AsuNHI	GCTAGC	1 cut(s)	1525
AvaI	CYCGRG	1 cut(s)	207
BaeGI	GKGCMC	2 cut(s)	503, 1256
BanII	GRGCYC	2 cut(s)	976, 1891
BarI	GAAGNNNNNNTAC	2 cut(s)	753, 785
BbsI	GAAGAC	1 cut(s)	31
Bbv12I	GWGCWC	1 cut(s)	1891
BbvCI	CCTCAGC	1 cut(s)	1878
BbvI	GCAGC	5 cut(s)	62, 121, 477, 1387, 1466
BccI	CCATC	6 cut(s)	385, 864, 894, 1571, 1697, 1867
BceAI	ACGGC	3 cut(s)	287, 428, 1099
BciT130I	CCWGG	3 cut(s)	728, 1152, 1325
BciVI	GTATCC	1 cut(s)	546
BcnI	CCSGG	4 cut(s)	208, 209, 275, 324
BcoDI	GTCTC	4 cut(s)	187, 340, 514, 1860
BfaI	CTAG	5 cut(s)	56, 818, 860, 1032, 1526
BfmI	CTRYAG	1 cut(s)	1480
BfoI	RGCGCY	1 cut(s)	74
BfrI	CTTAAG	1 cut(s)	340
BfuI	GTATCC	1 cut(s)	546
BisI	GCNGC	6 cut(s)	51, 110, 466, 1401, 1480, 1719
BlsI	GCNGC	6 cut(s)	52, 111, 467, 1402, 1481, 1720
BmcAI	AGTACT	2 cut(s)	1368, 1647
Bme1390I	CCNGG	7 cut(s)	208, 209, 275, 324, 728, 1152, 1325
BmeT110I	CYCGRG	1 cut(s)	207
BmgT120I	GGNCC	2 cut(s)	709, 903
BmiI	GGNNCC	3 cut(s)	222, 248, 766
BmrFI	CCNGG	7 cut(s)	208, 209, 275, 324, 728, 1152, 1325
BmrI	ACTGGG	1 cut(s)	290
BmsI	GCATC	4 cut(s)	189, 619, 1642, 1857
BmtI	GCTAGC	1 cut(s)	1529
BmuI	ACTGGG	1 cut(s)	290
BpiI	GAAGAC	1 cut(s)	31
BpmI	CTGGAG	2 cut(s)	710, 1815
Bpu10I	CCTNAGC	1 cut(s)	1878
BpuMI	CCSGG	4 cut(s)	208, 209, 275, 324
Bsa29I	ATCGAT	1 cut(s)	43
BsaI	GGTCTC	1 cut(s)	187
BsaJI	CCNNGG	8 cut(s)	119, 207, 273, 323, 494, 712, 1213, 1761
BsaWI	WCCGGW	3 cut(s)	217, 223, 939
BsaXI	ACNNNNNCTCC	2 cut(s)	337, 367
Bsc4I	CCNNNNNNNGG	5 cut(s)	309, 652, 1347, 1565, 1725
Bse118I	RCCGGY	4 cut(s)	217, 413, 939, 1347
Bse1I	ACTGG	2 cut(s)	296, 1605
Bse3DI	GCAATG	2 cut(s)	175, 1056
BseAI	TCCGGA	1 cut(s)	223
BseBI	CCWGG	3 cut(s)	728, 1152, 1325
BseCI	ATCGAT	1 cut(s)	43
BseDI	CCNNGG	8 cut(s)	119, 207, 273, 323, 494, 712, 1213, 1761
BseGI	GGATG	5 cut(s)	180, 377, 852, 1459, 1555
BseLI	CCNNNNNNNGG	5 cut(s)	309, 652, 1347, 1565, 1725
BseMI	GCAATG	2 cut(s)	175, 1056
BseMII	CTCAG	4 cut(s)	300, 419, 1865, 1869
BseNI	ACTGG	2 cut(s)	296, 1605
BseRI	GAGGAG	2 cut(s)	347, 1280
BseSI	GKGCMC	2 cut(s)	503, 1256
BseXI	GCAGC	5 cut(s)	62, 121, 477, 1387, 1466
BseYI	CCCAGC	2 cut(s)	1159, 1529
BshFI	GGCC	7 cut(s)	413, 565, 711, 904, 1114, 1150, 1806
BshTI	ACCGGT	2 cut(s)	217, 939
BshVI	ATCGAT	1 cut(s)	43
BsiHKAI	GWGCWC	1 cut(s)	1891
BsiHKCI	CYCGRG	1 cut(s)	207
BsiSI	CCGG	8 cut(s)	208, 218, 224, 275, 323, 414, 940, 1348
BslI	CCNNNNNNNGG	5 cut(s)	309, 652, 1347, 1565, 1725
BsmAI	GTCTC	4 cut(s)	187, 340, 514, 1860
BsmI	GAATGC	1 cut(s)	1438
BsnI	GGCC	7 cut(s)	413, 565, 711, 904, 1114, 1150, 1806
Bso31I	GGTCTC	1 cut(s)	187
BsoBI	CYCGRG	1 cut(s)	207
Bsp1286I	GDGCHC	4 cut(s)	503, 976, 1256, 1891
Bsp13I	TCCGGA	1 cut(s)	223
Bsp1407I	TGTACA	1 cut(s)	1738
Bsp143I	GATC	4 cut(s)	6, 75, 187, 1484
BspACI	CCGC	5 cut(s)	542, 823, 1559, 1719, 1935
BspANI	GGCC	7 cut(s)	413, 565, 711, 904, 1114, 1150, 1806
BspCNI	CTCAG	4 cut(s)	299, 420, 1864, 1870
BspDI	ATCGAT	1 cut(s)	43
BspEI	TCCGGA	1 cut(s)	223
BspHI	TCATGA	1 cut(s)	871
BspLI	GGNNCC	3 cut(s)	222, 248, 766
BspMAI	CTGCAG	1 cut(s)	1484
BspOI	GCTAGC	1 cut(s)	1529
BspPI	GGATC	1 cut(s)	182
BspTI	CTTAAG	1 cut(s)	340
BspTNI	GGTCTC	1 cut(s)	187
BsrBI	CCGCTC	2 cut(s)	823, 1561
BsrDI	GCAATG	2 cut(s)	175, 1056
BsrFI	RCCGGY	4 cut(s)	217, 413, 939, 1347
BsrGI	TGTACA	1 cut(s)	1738
BsrI	ACTGG	2 cut(s)	296, 1605
BssAI	RCCGGY	4 cut(s)	217, 413, 939, 1347
BssECI	CCNNGG	8 cut(s)	119, 207, 273, 323, 494, 712, 1213, 1761
BssMI	GATC	4 cut(s)	6, 75, 187, 1484
BssT1I	CCWWGG	2 cut(s)	494, 712
Bst2UI	CCWGG	3 cut(s)	728, 1152, 1325
Bst4CI	ACNGT	4 cut(s)	440, 1196, 1217, 1294
Bst6I	CTCTTC	2 cut(s)	134, 480
BstAFI	CTTAAG	1 cut(s)	340
BstAPI	GCANNNNNTGC	1 cut(s)	1400
BstAUI	TGTACA	1 cut(s)	1738
BstC8I	GCNNGC	7 cut(s)	563, 745, 842, 846, 956, 1349, 1527
BstDEI	CTNAG	9 cut(s)	286, 350, 428, 458, 979, 1248, 1428, 1851, 1878
BstDSI	CCRYGG	2 cut(s)	119, 1213
BstF5I	GGATG	5 cut(s)	180, 377, 852, 1459, 1555
BstH2I	RGCGCY	1 cut(s)	74
BstHHI	GCGC	3 cut(s)	73, 1077, 1633
BstKTI	GATC	4 cut(s)	9, 78, 190, 1487
BstMAI	GTCTC	4 cut(s)	187, 340, 514, 1860
BstMBI	GATC	4 cut(s)	6, 75, 187, 1484
BstMWI	GCNNNNNNNGC	5 cut(s)	56, 471, 1156, 1400, 1526
BstNI	CCWGG	3 cut(s)	728, 1152, 1325
BstNSI	RCATGY	4 cut(s)	958, 1279, 1322, 1832
BstSCI	CCNGG	7 cut(s)	206, 207, 273, 322, 726, 1150, 1323
BstSFI	CTRYAG	1 cut(s)	1480
BstSLI	GKGCMC	2 cut(s)	503, 1256
BstV1I	GCAGC	5 cut(s)	62, 121, 477, 1387, 1466
BstV2I	GAAGAC	1 cut(s)	31
BstXI	CCANNNNNNTGG	1 cut(s)	913
Bsu15I	ATCGAT	1 cut(s)	43
BsuI	GTATCC	1 cut(s)	546
BsuRI	GGCC	7 cut(s)	413, 565, 711, 904, 1114, 1150, 1806
BsuTUI	ATCGAT	1 cut(s)	43
BtgI	CCRYGG	2 cut(s)	119, 1213
BtsCI	GGATG	5 cut(s)	180, 377, 852, 1459, 1555
BtsIMutI	CAGTG	1 cut(s)	445
Cac8I	GCNNGC	7 cut(s)	563, 745, 842, 846, 956, 1349, 1527
CciI	TCATGA	1 cut(s)	871
CfoI	GCGC	3 cut(s)	73, 1077, 1633
Cfr10I	RCCGGY	4 cut(s)	217, 413, 939, 1347
Cfr13I	GGNCC	2 cut(s)	709, 903
Cfr9I	CCCGGG	1 cut(s)	207
ClaI	ATCGAT	1 cut(s)	43
CseI	GACGC	1 cut(s)	1314
Csp6I	GTAC	4 cut(s)	1011, 1367, 1646, 1739
CspAI	ACCGGT	2 cut(s)	217, 939
CspCI	CAANNNNNGTGG	4 cut(s)	101, 136, 280, 315
CviQI	GTAC	4 cut(s)	1011, 1367, 1646, 1739
DdeI	CTNAG	9 cut(s)	286, 350, 428, 458, 979, 1248, 1428, 1851, 1878
DpnI	GATC	4 cut(s)	8, 77, 189, 1486
DpnII	GATC	4 cut(s)	6, 75, 187, 1484
DraI	TTTAAA	1 cut(s)	894
Eam1104I	CTCTTC	2 cut(s)	134, 480
EarI	CTCTTC	2 cut(s)	134, 480
Ecl136II	GAGCTC	1 cut(s)	1889
Eco130I	CCWWGG	2 cut(s)	494, 712
Eco24I	GRGCYC	2 cut(s)	976, 1891
Eco31I	GGTCTC	1 cut(s)	187
Eco32I	GATATC	1 cut(s)	229
Eco47III	AGCGCT	1 cut(s)	72
Eco53kI	GAGCTC	1 cut(s)	1889
Eco57I	CTGAAG	4 cut(s)	1304, 1374, 1391, 1856
Eco88I	CYCGRG	1 cut(s)	207
EcoICRI	GAGCTC	1 cut(s)	1889
EcoRII	CCWGG	3 cut(s)	726, 1150, 1323
EcoRV	GATATC	1 cut(s)	229
EcoT14I	CCWWGG	2 cut(s)	494, 712
EcoT22I	ATGCAT	2 cut(s)	759, 1438
EcoT38I	GRGCYC	2 cut(s)	976, 1891
ErhI	CCWWGG	2 cut(s)	494, 712
FalI	AAGNNNNNCTT	4 cut(s)	1035, 1067, 1163, 1195
FauI	CCCGC	1 cut(s)	535
FauNDI	CATATG	1 cut(s)	1670
Fnu4HI	GCNGC	6 cut(s)	51, 110, 466, 1401, 1480, 1719
FokI	GGATG	5 cut(s)	167, 364, 839, 1466, 1542
FriOI	GRGCYC	2 cut(s)	976, 1891
Fsp4HI	GCNGC	6 cut(s)	51, 110, 466, 1401, 1480, 1719
FspBI	CTAG	5 cut(s)	56, 818, 860, 1032, 1526
FspI	TGCGCA	1 cut(s)	1632
GlaI	GCGC	3 cut(s)	72, 1076, 1632
GluI	GCNGC	6 cut(s)	51, 110, 466, 1401, 1480, 1719
GsaI	CCCAGC	2 cut(s)	1163, 1533
GsuI	CTGGAG	2 cut(s)	710, 1815
HaeII	RGCGCY	1 cut(s)	74
HaeIII	GGCC	7 cut(s)	413, 565, 711, 904, 1114, 1150, 1806
HapII	CCGG	8 cut(s)	208, 218, 224, 275, 323, 414, 940, 1348
HgaI	GACGC	1 cut(s)	1314
HhaI	GCGC	3 cut(s)	73, 1077, 1633
Hin6I	GCGC	3 cut(s)	71, 1075, 1631
HinP1I	GCGC	3 cut(s)	71, 1075, 1631
HincII	GTYRAC	1 cut(s)	1918
HindII	GTYRAC	1 cut(s)	1918
HinfI	GANTC	8 cut(s)	40, 80, 86, 278, 992, 1571, 1595, 1601
HpaII	CCGG	8 cut(s)	208, 218, 224, 275, 323, 414, 940, 1348
HphI	GGTGA	2 cut(s)	151, 1628
Hpy166II	GTNNAC	2 cut(s)	683, 1918
Hpy188III	TCNNGA	9 cut(s)	152, 224, 448, 872, 1052, 1092, 1238, 1538, 1768
Hpy8I	GTNNAC	2 cut(s)	683, 1918
HpyAV	CCTTC	4 cut(s)	292, 755, 1110, 1306
HpyCH4III	ACNGT	4 cut(s)	440, 1196, 1217, 1294
HpyCH4IV	ACGT	1 cut(s)	64
HpyF10VI	GCNNNNNNNGC	5 cut(s)	56, 471, 1156, 1400, 1526
HpyF3I	CTNAG	9 cut(s)	286, 350, 428, 458, 979, 1248, 1428, 1851, 1878
HpySE526I	ACGT	1 cut(s)	64
HspAI	GCGC	3 cut(s)	71, 1075, 1631
Kpn2I	TCCGGA	1 cut(s)	223
KroI	GCCGGC	1 cut(s)	1347
KroNI	GCCGGC	1 cut(s)	1349
Kzo9I	GATC	4 cut(s)	6, 75, 187, 1484
LmnI	GCTCC	3 cut(s)	173, 275, 939
Lsp1109I	GCAGC	5 cut(s)	62, 121, 477, 1387, 1466
LweI	GCATC	4 cut(s)	189, 619, 1642, 1857
MaeI	CTAG	5 cut(s)	56, 818, 860, 1032, 1526
MaeII	ACGT	1 cut(s)	64
MaeIII	GTNAC	3 cut(s)	123, 797, 1278
MalI	GATC	4 cut(s)	8, 77, 189, 1486
MbiI	CCGCTC	2 cut(s)	823, 1561
MboI	GATC	4 cut(s)	6, 75, 187, 1484
MboII	GAAGA	9 cut(s)	26, 36, 89, 121, 497, 628, 824, 1384, 1428
MhlI	GDGCHC	4 cut(s)	503, 976, 1256, 1891
MluCI	AATT	7 cut(s)	233, 889, 1447, 1508, 1698, 1751, 1779
MlyI	GAGTC	1 cut(s)	272
MmeI	TCCRAC	2 cut(s)	558, 670
Mph1103I	ATGCAT	2 cut(s)	759, 1438
MroI	TCCGGA	1 cut(s)	223
MroNI	GCCGGC	1 cut(s)	1347
MroXI	GAANNNNTTC	2 cut(s)	145, 1099
MseI	TTAA	4 cut(s)	341, 507, 893, 1622
MslI	CAYNNNNRTG	2 cut(s)	402, 654
MspA1I	CMGCKG	1 cut(s)	848
MspCI	CTTAAG	1 cut(s)	340
MspI	CCGG	8 cut(s)	208, 218, 224, 275, 323, 414, 940, 1348
MspR9I	CCNGG	7 cut(s)	208, 209, 275, 324, 728, 1152, 1325
Mva1269I	GAATGC	1 cut(s)	1438
MvaI	CCWGG	3 cut(s)	728, 1152, 1325
MwoI	GCNNNNNNNGC	5 cut(s)	56, 471, 1156, 1400, 1526
NaeI	GCCGGC	1 cut(s)	1349
NciI	CCSGG	4 cut(s)	208, 209, 275, 324
NdeI	CATATG	1 cut(s)	1670
NdeII	GATC	4 cut(s)	6, 75, 187, 1484
NgoMIV	GCCGGC	1 cut(s)	1347
NheI	GCTAGC	1 cut(s)	1525
NlaIV	GGNNCC	3 cut(s)	222, 248, 766
NmuCI	GTSAC	1 cut(s)	123
NsbI	TGCGCA	1 cut(s)	1632
NsiI	ATGCAT	2 cut(s)	759, 1438
NspI	RCATGY	4 cut(s)	958, 1279, 1322, 1832
PaeI	GCATGC	1 cut(s)	958
PagI	TCATGA	1 cut(s)	871
PciI	ACATGT	2 cut(s)	1275, 1318
PctI	GAATGC	1 cut(s)	1438
PdiI	GCCGGC	1 cut(s)	1349
PdmI	GAANNNNTTC	2 cut(s)	145, 1099
PfeI	GAWTC	7 cut(s)	40, 80, 86, 992, 1571, 1595, 1601
PflFI	GACNNNGTC	1 cut(s)	687
PinAI	ACCGGT	2 cut(s)	217, 939
PkrI	GCNGC	6 cut(s)	52, 111, 467, 1402, 1481, 1720
PleI	GAGTC	1 cut(s)	272
PpsI	GAGTC	1 cut(s)	272
PscI	ACATGT	2 cut(s)	1275, 1318
PsiI	TTATAA	1 cut(s)	423
Psp124BI	GAGCTC	1 cut(s)	1891
Psp6I	CCWGG	3 cut(s)	726, 1150, 1323
PspFI	CCCAGC	2 cut(s)	1159, 1529
PspGI	CCWGG	3 cut(s)	726, 1150, 1323
PspN4I	GGNNCC	3 cut(s)	222, 248, 766
PspPI	GGNCC	2 cut(s)	709, 903
PstI	CTGCAG	1 cut(s)	1484
PsyI	GACNNNGTC	1 cut(s)	687
PvuII	CAGCTG	1 cut(s)	848
RsaI	GTAC	4 cut(s)	1012, 1368, 1647, 1740
RsaNI	GTAC	4 cut(s)	1011, 1367, 1646, 1739
RseI	CAYNNNNRTG	2 cut(s)	402, 654
SacI	GAGCTC	1 cut(s)	1891
SaqAI	TTAA	4 cut(s)	341, 507, 893, 1622
SatI	GCNGC	6 cut(s)	51, 110, 466, 1401, 1480, 1719
Sau3AI	GATC	4 cut(s)	6, 75, 187, 1484
Sau96I	GGNCC	2 cut(s)	709, 903
ScaI	AGTACT	2 cut(s)	1368, 1647
SchI	GAGTC	1 cut(s)	272
ScrFI	CCNGG	7 cut(s)	208, 209, 275, 324, 728, 1152, 1325
SduI	GDGCHC	4 cut(s)	503, 976, 1256, 1891
SfaNI	GCATC	4 cut(s)	189, 619, 1642, 1857
SfcI	CTRYAG	1 cut(s)	1480
SmaI	CCCGGG	1 cut(s)	209
SmiMI	CAYNNNNRTG	2 cut(s)	402, 654
SmlI	CTYRAG	1 cut(s)	340
SmoI	CTYRAG	1 cut(s)	340
SphI	GCATGC	1 cut(s)	958
Sse9I	AATT	7 cut(s)	233, 889, 1447, 1508, 1698, 1751, 1779
SsiI	CCGC	5 cut(s)	542, 823, 1559, 1719, 1935
SspI	AATATT	1 cut(s)	1626
SspMI	CTAG	5 cut(s)	56, 818, 860, 1032, 1526
SstI	GAGCTC	1 cut(s)	1891
StyD4I	CCNGG	7 cut(s)	206, 207, 273, 322, 726, 1150, 1323
StyI	CCWWGG	2 cut(s)	494, 712
TaaI	ACNGT	4 cut(s)	440, 1196, 1217, 1294
TaiI	ACGT	1 cut(s)	67
TaqI	TCGA	3 cut(s)	43, 78, 261
TasI	AATT	7 cut(s)	233, 889, 1447, 1508, 1698, 1751, 1779
TatI	WGTACW	3 cut(s)	1366, 1645, 1738
TauI	GCSGC	1 cut(s)	1721
TfiI	GAWTC	7 cut(s)	40, 80, 86, 992, 1571, 1595, 1601
Tru1I	TTAA	4 cut(s)	341, 507, 893, 1622
Tru9I	TTAA	4 cut(s)	341, 507, 893, 1622
TscAI	CASTG	1 cut(s)	445
TseFI	GTSAC	1 cut(s)	123
TseI	GCWGC	5 cut(s)	50, 109, 465, 1400, 1479
Tsp45I	GTSAC	1 cut(s)	123
TspGWI	ACGGA	3 cut(s)	239, 822, 1668
TspMI	CCCGGG	1 cut(s)	207
TspRI	CASTG	1 cut(s)	445
Tth111I	GACNNNGTC	1 cut(s)	687
Vha464I	CTTAAG	1 cut(s)	340
XapI	RAATTY	1 cut(s)	1447
XceI	RCATGY	4 cut(s)	958, 1279, 1322, 1832
XcmI	CCANNNNNNNNNTGG	1 cut(s)	863
XmaI	CCCGGG	1 cut(s)	207
XmnI	GAANNNNTTC	2 cut(s)	145, 1099
XspI	CTAG	5 cut(s)	56, 818, 860, 1032, 1526
ZrmI	AGTACT	2 cut(s)	1368, 1647
Zsp2I	ATGCAT	2 cut(s)	759, 1438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.