Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0006789

Physical Location & Seq

Genomic Coordinates Forward (+)

19243058 .. 19246085

Gene Structure 3028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g17200.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGATACCGGCGTATGATAAATTAGTTGCAAACATTCTACATGGATCTGCACAGCACAATGATAGTGATGGAATTTCATCCCAAACGCACAGTAGTACCAAGGCTCAAGTGGTTTCTGATTGCAATGGGGACAAGGGATGTTCAGAAGAGAACTTGGAAGGAGATGTTTCTACGAGCAGTGAAGACAAAGATGGACTTGAAAAGGAACACCAAAACAACTGTCAAGCAACCAAATCAAAGGACGCCGAACCAGTTCAGCCAACGGAAGCTAAAGAAAGTAGTACCAACCAAGTAGATGCTTTGCGATTTGAGGTGAGCCAATACACTGGTAGAATCCACTTGTATTCTTGCATCTCGGGAGAGGATTCAAGACCAAGGCCACTTTTTGAGAATTTTAGACCAGAAGAAATCGAGGCATTGAATTCTACTGCTGCTGACAATATTAAAGGAACTTCTTTCAAATTTTTGAAGGAGAATCCAGGTTATTTGCATGCTTTTCTTGCATTCATGGAAGAATGGAAGAAACTGAGGCCCATCGAACAAAAAAAATTACTTGGAAAGCCTTTGCAGCTTCCTTTGACTATTGAGTTGTGCTACCTGTGCGAAGGCATTAACCACGACATCAGGGGACTACTGAAAGGTGGAAGCAAGCGCCGCTCTACCCCTTTTGTTGAGATCAGCAAACCTTTACCATCAAACGCTGAGTGGAAAAAAGTCCGCCTACGTAGTGGCTATGGAAAAAAGGAGAAGGAATACACTCAGGGTTTTACTCTGACTGATGATCCTCTGTGCAAACTCTGTCAATCACCATGCACGGGCCATAATGCCAAGACACCTGAATATTTTGAAGATCTGTTCTGCCAGCTTAGCTGCTACGAAGAATACCGCATCCGAACAAGTAATAGATCTCTTCGTCATGAGCTTTTTCAACTGGAACGTGGTGTCTGCACAATTTGTCAATTAGATTGTCATAAACTTGTTGAGCACCTAAGACCGTTATCATTGGCAATGAGGAGGCAGTATATTGAAAAATTTGCGCCACGAGTGGCAATTCTGAAGAAACCGCTTGATAGGCTTGTTAAGGATCCGAAAGAGGGCAATGCATGGCATGCAGACCACTTTGTTCCTGTCTATCGAGGTGGAGGTGAATGCAGGCTCGAGAACATGAGAACACTTTGTGTGGCCTGTCATCGCGACGTTACTAAAGCACAATGTGCTGAACGGCTGTCAACAAGGATCCGGGCTAAGAAAAAACTGAAAGCAATCATGAACGACATTAAAAAGAAAGCTACGGAGACTAATCTAGCGGGCCCGGAACATATAGAGATTATGCAAGAGGATGCAATTGAGGATGAGCTTTTCGTCAAGGTTCCCGGGAGCGCCTACTCATTGGAAAATCGCTTGGATGCTACAACTACAGGCGAAGACTTGGACAAGCCCTCCAGTAGCAACAAGGTTCCAACGGTAGATAGCCATCTGTTAGGAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000228 GO:0000733 GO:0003674 GO:0003676 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0031297 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031593 GO:0031974 GO:0031981 GO:0032392 GO:0033554 GO:0034641 GO:0034645 GO:0036292 GO:0036310 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048478 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070530 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097617 GO:0140030 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HNH Helicase_C SNF2_N

Protein Analysis

497

Amino Acids

55.96

Weight (kDa)

6.96

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006789)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07810
fragaria_vesca	FvH4_5g14341 FvH4_5g14341 FvH4_5g14341 FvH4_5g14341
malus_domestica	MD14G1208200.v1.1
prunus_persica	Prupe.5G200300_v2.0.a1
pyrus_communis	pycom14g17190 pycom14g17200
rosa_chinensis	RchiOBHm_Chr7g0182391
rosa_laevigata	RLG00000005127
rosa_multiflora	Rmu_co8327751.1_g000001 Rmu_sc0000003.1_g000001 Rmu_sc0034215.1_g000001 Rmu_sc0034216.1_g000001 Rmu_sc0037577.1_g000004 Rmu_sc0037929.1_g000001 Rmu_ssc0000034.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271270
rosa_rugosa	Rorug06G0447100
rosa_samantha	Rh7AG050500 Rh7BG050300 Rh7CG051800 Rh7CG051900 Rh7DG049600
rosa_wichuraiana	Rw7G004130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	657
AccII	CGCG	1 cut(s)	1194
AciI	CCGC	5 cut(s)	655, 718, 886, 1064, 1307
AclWI	GGATC	6 cut(s)	52, 776, 1079, 1092, 1231, 1244
AcsI	RAATTY	5 cut(s)	72, 391, 421, 461, 1031
AcuI	CTGAAG	1 cut(s)	1076
AcyI	GRCGYC	1 cut(s)	243
AdeI	CACNNNGTG	2 cut(s)	1178, 1214
AfaI	GTAC	2 cut(s)	97, 283
AfiI	CCNNNNNNNGG	2 cut(s)	815, 1094
AgsI	TTSAA	8 cut(s)	200, 369, 421, 460, 469, 848, 929, 1028
AjnI	CCWGG	1 cut(s)	478
AluBI	AGCT	7 cut(s)	269, 571, 865, 870, 922, 1289, 1357
AluI	AGCT	7 cut(s)	269, 571, 865, 870, 922, 1289, 1357
Alw21I	GWGCWC	1 cut(s)	987
Alw26I	GTCTC	1 cut(s)	1289
AlwI	GGATC	6 cut(s)	52, 776, 1079, 1092, 1231, 1244
Ama87I	CYCGRG	3 cut(s)	355, 1157, 1373
AoxI	GGCC	5 cut(s)	377, 530, 817, 1182, 1309
ApaI	GGGCCC	1 cut(s)	1313
ApeKI	GCWGC	3 cut(s)	431, 568, 870
ApoI	RAATTY	5 cut(s)	72, 391, 421, 461, 1031
ArsI	GACNNNNNNTTYG	2 cut(s)	205, 237
Asp700I	GAANNNNTTC	1 cut(s)	252
AspLEI	GCGC	3 cut(s)	654, 1039, 1382
AspS9I	GGNCC	4 cut(s)	531, 817, 1309, 1310
AsuC2I	CCSGG	4 cut(s)	1241, 1313, 1374, 1375
AsuHPI	GGTGA	3 cut(s)	325, 798, 1157
AvaI	CYCGRG	3 cut(s)	355, 1157, 1373
BaeGI	GKGCMC	1 cut(s)	1313
BaeI	ACNNNNGTAYC	3 cut(s)	29, 79, 112
BamHI	GGATCC	2 cut(s)	1084, 1236
BanII	GRGCYC	1 cut(s)	1313
BauI	CACGAG	1 cut(s)	1041
BbsI	GAAGAC	2 cut(s)	189, 1431
Bbv12I	GWGCWC	1 cut(s)	987
BbvI	GCAGC	3 cut(s)	418, 580, 857
BccI	CCATC	5 cut(s)	62, 185, 542, 700, 1482
BceAI	ACGGC	1 cut(s)	1238
BciT130I	CCWGG	1 cut(s)	480
BcnI	CCSGG	4 cut(s)	1241, 1313, 1374, 1375
BcoDI	GTCTC	1 cut(s)	1289
BfaI	CTAG	1 cut(s)	1304
BfmI	CTRYAG	1 cut(s)	1416
BfoI	RGCGCY	2 cut(s)	655, 1383
BglII	AGATCT	2 cut(s)	850, 905
BisI	GCNGC	4 cut(s)	432, 569, 655, 871
BlpI	GCTNAGC	1 cut(s)	866
BlsI	GCNGC	4 cut(s)	433, 570, 656, 872
Bme1390I	CCNGG	5 cut(s)	480, 1241, 1313, 1374, 1375
BmeT110I	CYCGRG	3 cut(s)	355, 1157, 1373
BmgT120I	GGNCC	4 cut(s)	531, 817, 1309, 1310
BmiI	GGNNCC	5 cut(s)	1086, 1238, 1311, 1371, 1458
BmrFI	CCNGG	5 cut(s)	480, 1241, 1313, 1374, 1375
BmsI	GCATC	5 cut(s)	286, 360, 897, 1330, 1396
BpiI	GAAGAC	2 cut(s)	189, 1431
BpmI	CTGGAG	1 cut(s)	1426
Bpu1102I	GCTNAGC	1 cut(s)	866
BpuEI	CTTGAG	1 cut(s)	90
BpuMI	CCSGG	4 cut(s)	1241, 1313, 1374, 1375
BsaAI	YACGTR	1 cut(s)	725
BsaBI	GATNNNNATC	1 cut(s)	1473
BsaHI	GRCGYC	1 cut(s)	243
BsaJI	CCNNGG	3 cut(s)	99, 374, 1373
BsaXI	ACNNNNNCTCC	2 cut(s)	1424, 1454
Bsc4I	CCNNNNNNNGG	2 cut(s)	815, 1094
Bse118I	RCCGGY	1 cut(s)	7
Bse1I	ACTGG	4 cut(s)	251, 331, 936, 1443
Bse3DI	GCAATG	3 cut(s)	130, 1014, 1105
Bse8I	GATNNNNATC	1 cut(s)	1473
BseBI	CCWGG	1 cut(s)	480
BseDI	CCNNGG	3 cut(s)	99, 374, 1373
BseGI	GGATG	6 cut(s)	77, 143, 888, 1345, 1357, 1411
BseJI	GATNNNNATC	1 cut(s)	1473
BseLI	CCNNNNNNNGG	2 cut(s)	815, 1094
BseMI	GCAATG	3 cut(s)	130, 1014, 1105
BseMII	CTCAG	3 cut(s)	518, 693, 773
BseNI	ACTGG	4 cut(s)	251, 331, 936, 1443
BseRI	GAGGAG	1 cut(s)	1027
BseSI	GKGCMC	1 cut(s)	1313
BseXI	GCAGC	3 cut(s)	418, 580, 857
BsgI	GTGCAG	2 cut(s)	33, 931
Bsh1236I	CGCG	1 cut(s)	1194
BshFI	GGCC	5 cut(s)	379, 532, 819, 1184, 1311
BsiHKAI	GWGCWC	1 cut(s)	987
BsiHKCI	CYCGRG	3 cut(s)	355, 1157, 1373
BsiSI	CCGG	4 cut(s)	8, 1240, 1313, 1374
BslFI	GGGAC	2 cut(s)	143, 642
BslI	CCNNNNNNNGG	2 cut(s)	815, 1094
BsmAI	GTCTC	1 cut(s)	1289
BsmFI	GGGAC	2 cut(s)	143, 642
BsmI	GAATGC	2 cut(s)	503, 1154
BsnI	GGCC	5 cut(s)	379, 532, 819, 1184, 1311
BsoBI	CYCGRG	3 cut(s)	355, 1157, 1373
Bsp120I	GGGCCC	1 cut(s)	1309
Bsp1286I	GDGCHC	2 cut(s)	987, 1313
Bsp143I	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
Bsp1720I	GCTNAGC	1 cut(s)	866
Bsp68I	TCGCGA	1 cut(s)	1194
BspACI	CCGC	5 cut(s)	655, 718, 886, 1064, 1307
BspANI	GGCC	5 cut(s)	379, 532, 819, 1184, 1311
BspCNI	CTCAG	3 cut(s)	519, 694, 772
BspFNI	CGCG	1 cut(s)	1194
BspHI	TCATGA	2 cut(s)	916, 1266
BspLI	GGNNCC	5 cut(s)	1086, 1238, 1311, 1371, 1458
BspPI	GGATC	6 cut(s)	52, 776, 1079, 1092, 1231, 1244
BsrBI	CCGCTC	1 cut(s)	657
BsrDI	GCAATG	3 cut(s)	130, 1014, 1105
BsrFI	RCCGGY	1 cut(s)	7
BsrI	ACTGG	4 cut(s)	251, 331, 936, 1443
BssAI	RCCGGY	1 cut(s)	7
BssECI	CCNNGG	3 cut(s)	99, 374, 1373
BssMI	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
BssNI	GRCGYC	1 cut(s)	243
BssSI	CACGAG	1 cut(s)	1041
BssT1I	CCWWGG	2 cut(s)	99, 374
Bst2BI	CACGAG	1 cut(s)	1041
Bst2UI	CCWGG	1 cut(s)	480
Bst4CI	ACNGT	4 cut(s)	92, 221, 996, 1465
Bst6I	CTCTTC	2 cut(s)	141, 915
BstACI	GRCGYC	1 cut(s)	243
BstAPI	GCANNNNNTGC	2 cut(s)	1109, 1214
BstBAI	YACGTR	1 cut(s)	725
BstC8I	GCNNGC	6 cut(s)	492, 650, 863, 1110, 1154, 1309
BstDEI	CTNAG	6 cut(s)	527, 702, 759, 866, 989, 1245
BstF5I	GGATG	6 cut(s)	77, 143, 888, 1345, 1357, 1411
BstFNI	CGCG	1 cut(s)	1194
BstH2I	RGCGCY	2 cut(s)	655, 1383
BstHHI	GCGC	3 cut(s)	654, 1039, 1382
BstKTI	GATC	7 cut(s)	47, 678, 784, 853, 908, 1087, 1239
BstMAI	GTCTC	1 cut(s)	1289
BstMBI	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
BstMWI	GCNNNNNNNGC	8 cut(s)	500, 568, 600, 654, 867, 1072, 1109, 1214
BstNI	CCWGG	1 cut(s)	480
BstNSI	RCATGY	2 cut(s)	494, 1112
BstSCI	CCNGG	5 cut(s)	478, 1239, 1311, 1372, 1373
BstSFI	CTRYAG	1 cut(s)	1416
BstSLI	GKGCMC	1 cut(s)	1313
BstSNI	TACGTA	1 cut(s)	725
BstUI	CGCG	1 cut(s)	1194
BstV1I	GCAGC	3 cut(s)	418, 580, 857
BstV2I	GAAGAC	2 cut(s)	189, 1431
BstX2I	RGATCY	5 cut(s)	44, 850, 905, 1084, 1236
BstXI	CCANNNNNNTGG	1 cut(s)	326
BstYI	RGATCY	5 cut(s)	44, 850, 905, 1084, 1236
BsuRI	GGCC	5 cut(s)	379, 532, 819, 1184, 1311
BtgZI	GCGATG	1 cut(s)	1175
BtsCI	GGATG	6 cut(s)	77, 143, 888, 1345, 1357, 1411
BtsI	GCAGTG	1 cut(s)	184
BtsIMutI	CAGTG	2 cut(s)	184, 324
BtuMI	TCGCGA	1 cut(s)	1194
Cac8I	GCNNGC	6 cut(s)	492, 650, 863, 1110, 1154, 1309
CciI	TCATGA	2 cut(s)	916, 1266
CfoI	GCGC	3 cut(s)	654, 1039, 1382
Cfr10I	RCCGGY	1 cut(s)	7
Cfr13I	GGNCC	4 cut(s)	531, 817, 1309, 1310
Cfr9I	CCCGGG	1 cut(s)	1373
CseI	GACGC	1 cut(s)	251
Csp6I	GTAC	2 cut(s)	96, 282
CviAII	CATG	9 cut(s)	41, 491, 508, 810, 917, 1104, 1109, 1165, 1267
CviQI	GTAC	2 cut(s)	96, 282
DdeI	CTNAG	6 cut(s)	527, 702, 759, 866, 989, 1245
DpnI	GATC	7 cut(s)	46, 677, 783, 852, 907, 1086, 1238
DpnII	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
DraIII	CACNNNGTG	2 cut(s)	1178, 1214
Eam1104I	CTCTTC	2 cut(s)	141, 915
EarI	CTCTTC	2 cut(s)	141, 915
EciI	GGCGGA	1 cut(s)	707
Eco105I	TACGTA	1 cut(s)	725
Eco130I	CCWWGG	2 cut(s)	99, 374
Eco24I	GRGCYC	1 cut(s)	1313
Eco57I	CTGAAG	1 cut(s)	1076
Eco88I	CYCGRG	3 cut(s)	355, 1157, 1373
EcoRI	GAATTC	1 cut(s)	421
EcoRII	CCWGG	1 cut(s)	478
EcoT14I	CCWWGG	2 cut(s)	99, 374
EcoT22I	ATGCAT	1 cut(s)	1105
EcoT38I	GRGCYC	1 cut(s)	1313
ErhI	CCWWGG	2 cut(s)	99, 374
FaeI	CATG	9 cut(s)	44, 494, 511, 813, 920, 1107, 1112, 1168, 1270
FalI	AAGNNNNNCTT	2 cut(s)	180, 212
FaqI	GGGAC	2 cut(s)	143, 642
FatI	CATG	9 cut(s)	40, 490, 507, 809, 916, 1103, 1108, 1164, 1266
FauI	CCCGC	1 cut(s)	1300
Fnu4HI	GCNGC	4 cut(s)	432, 569, 655, 871
FokI	GGATG	6 cut(s)	64, 150, 875, 1352, 1364, 1418
FriOI	GRGCYC	1 cut(s)	1313
Fsp4HI	GCNGC	4 cut(s)	432, 569, 655, 871
FspBI	CTAG	1 cut(s)	1304
GlaI	GCGC	3 cut(s)	653, 1038, 1381
GluI	GCNGC	4 cut(s)	432, 569, 655, 871
GsuI	CTGGAG	1 cut(s)	1426
HaeII	RGCGCY	2 cut(s)	655, 1383
HaeIII	GGCC	5 cut(s)	379, 532, 819, 1184, 1311
HapII	CCGG	4 cut(s)	8, 1240, 1313, 1374
HgaI	GACGC	1 cut(s)	251
HhaI	GCGC	3 cut(s)	654, 1039, 1382
Hin1I	GRCGYC	1 cut(s)	243
Hin1II	CATG	9 cut(s)	44, 494, 511, 813, 920, 1107, 1112, 1168, 1270
Hin6I	GCGC	3 cut(s)	652, 1037, 1380
HinP1I	GCGC	3 cut(s)	652, 1037, 1380
HincII	GTYRAC	1 cut(s)	1230
HindII	GTYRAC	1 cut(s)	1230
HinfI	GANTC	3 cut(s)	333, 365, 475
HpaII	CCGG	4 cut(s)	8, 1240, 1313, 1374
HphI	GGTGA	3 cut(s)	325, 798, 1157
Hpy166II	GTNNAC	1 cut(s)	1230
Hpy188I	TCNGA	6 cut(s)	118, 145, 774, 893, 1056, 1089
Hpy188III	TCNNGA	6 cut(s)	357, 369, 917, 1159, 1193, 1267
Hpy8I	GTNNAC	1 cut(s)	1230
Hpy99I	CGWCG	1 cut(s)	1199
HpyAV	CCTTC	4 cut(s)	152, 463, 599, 742
HpyCH4III	ACNGT	4 cut(s)	92, 221, 996, 1465
HpyCH4IV	ACGT	3 cut(s)	724, 937, 1197
HpyF10VI	GCNNNNNNNGC	8 cut(s)	500, 568, 600, 654, 867, 1072, 1109, 1214
HpyF3I	CTNAG	6 cut(s)	527, 702, 759, 866, 989, 1245
HpySE526I	ACGT	3 cut(s)	724, 937, 1197
Hsp92I	GRCGYC	1 cut(s)	243
Hsp92II	CATG	9 cut(s)	44, 494, 511, 813, 920, 1107, 1112, 1168, 1270
HspAI	GCGC	3 cut(s)	652, 1037, 1380
Kzo9I	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
LmnI	GCTCC	1 cut(s)	1377
Lsp1109I	GCAGC	3 cut(s)	418, 580, 857
LweI	GCATC	5 cut(s)	286, 360, 897, 1330, 1396
MaeI	CTAG	1 cut(s)	1304
MaeII	ACGT	3 cut(s)	724, 937, 1197
MaeIII	GTNAC	1 cut(s)	1198
MalI	GATC	7 cut(s)	46, 677, 783, 852, 907, 1086, 1238
MbiI	CCGCTC	1 cut(s)	657
MboI	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
MfeI	CAATTG	1 cut(s)	1344
MflI	RGATCY	5 cut(s)	44, 850, 905, 1084, 1236
MhlI	GDGCHC	2 cut(s)	987, 1313
MmeI	TCCRAC	1 cut(s)	1484
Mph1103I	ATGCAT	1 cut(s)	1105
MroXI	GAANNNNTTC	1 cut(s)	252
MseI	TTAA	4 cut(s)	444, 612, 1080, 1278
MspI	CCGG	4 cut(s)	8, 1240, 1313, 1374
MspR9I	CCNGG	5 cut(s)	480, 1241, 1313, 1374, 1375
MunI	CAATTG	1 cut(s)	1344
Mva1269I	GAATGC	2 cut(s)	503, 1154
MvaI	CCWGG	1 cut(s)	480
MvnI	CGCG	1 cut(s)	1194
MwoI	GCNNNNNNNGC	8 cut(s)	500, 568, 600, 654, 867, 1072, 1109, 1214
NciI	CCSGG	4 cut(s)	1241, 1313, 1374, 1375
NdeII	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
NlaIII	CATG	9 cut(s)	44, 494, 511, 813, 920, 1107, 1112, 1168, 1270
NlaIV	GGNNCC	5 cut(s)	1086, 1238, 1311, 1371, 1458
NruI	TCGCGA	1 cut(s)	1194
NsiI	ATGCAT	1 cut(s)	1105
NspI	RCATGY	2 cut(s)	494, 1112
PaeI	GCATGC	2 cut(s)	494, 1112
PaeR7I	CTCGAG	1 cut(s)	1157
PagI	TCATGA	2 cut(s)	916, 1266
PctI	GAATGC	2 cut(s)	503, 1154
PdmI	GAANNNNTTC	1 cut(s)	252
PfeI	GAWTC	3 cut(s)	333, 365, 475
PkrI	GCNGC	4 cut(s)	433, 570, 656, 872
Ppu21I	YACGTR	1 cut(s)	725
Psp6I	CCWGG	1 cut(s)	478
PspGI	CCWGG	1 cut(s)	478
PspN4I	GGNNCC	5 cut(s)	1086, 1238, 1311, 1371, 1458
PspOMI	GGGCCC	1 cut(s)	1309
PspPI	GGNCC	4 cut(s)	531, 817, 1309, 1310
PsuI	RGATCY	5 cut(s)	44, 850, 905, 1084, 1236
RruI	TCGCGA	1 cut(s)	1194
RsaI	GTAC	2 cut(s)	97, 283
RsaNI	GTAC	2 cut(s)	96, 282
SaqAI	TTAA	4 cut(s)	444, 612, 1080, 1278
SatI	GCNGC	4 cut(s)	432, 569, 655, 871
Sau3AI	GATC	7 cut(s)	44, 675, 781, 850, 905, 1084, 1236
Sau96I	GGNCC	4 cut(s)	531, 817, 1309, 1310
ScrFI	CCNGG	5 cut(s)	480, 1241, 1313, 1374, 1375
SduI	GDGCHC	2 cut(s)	987, 1313
SfaNI	GCATC	5 cut(s)	286, 360, 897, 1330, 1396
SfcI	CTRYAG	1 cut(s)	1416
Sfr274I	CTCGAG	1 cut(s)	1157
SlaI	CTCGAG	1 cut(s)	1157
SmaI	CCCGGG	1 cut(s)	1375
SmlI	CTYRAG	2 cut(s)	105, 1157
SmoI	CTYRAG	2 cut(s)	105, 1157
SnaBI	TACGTA	1 cut(s)	725
SphI	GCATGC	2 cut(s)	494, 1112
SsiI	CCGC	5 cut(s)	655, 718, 886, 1064, 1307
SspI	AATATT	2 cut(s)	442, 842
SspMI	CTAG	1 cut(s)	1304
StyD4I	CCNGG	5 cut(s)	478, 1239, 1311, 1372, 1373
StyI	CCWWGG	2 cut(s)	99, 374
TaaI	ACNGT	4 cut(s)	92, 221, 996, 1465
TaiI	ACGT	3 cut(s)	727, 940, 1200
TaqI	TCGA	4 cut(s)	411, 537, 1135, 1158
TauI	GCSGC	1 cut(s)	657
TfiI	GAWTC	3 cut(s)	333, 365, 475
Tru1I	TTAA	4 cut(s)	444, 612, 1080, 1278
Tru9I	TTAA	4 cut(s)	444, 612, 1080, 1278
TscAI	CASTG	2 cut(s)	184, 331
TseI	GCWGC	3 cut(s)	431, 568, 870
TspDTI	ATGAA	3 cut(s)	66, 496, 1283
TspGWI	ACGGA	2 cut(s)	278, 1307
TspMI	CCCGGG	1 cut(s)	1373
TspRI	CASTG	2 cut(s)	184, 331
XapI	RAATTY	5 cut(s)	72, 391, 421, 461, 1031
XceI	RCATGY	2 cut(s)	494, 1112
XcmI	CCANNNNNNNNNTGG	1 cut(s)	106
XhoI	CTCGAG	1 cut(s)	1157
XmaI	CCCGGG	1 cut(s)	1373
XmnI	GAANNNNTTC	1 cut(s)	252
XspI	CTAG	1 cut(s)	1304
Zsp2I	ATGCAT	1 cut(s)	1105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.