pycom15g00110

Encoded by

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
68256 .. 69667
1412 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g00110.1

Sequence Viewer

Length: 1365 bp
ATGTTGACGTCCATGATGCAAGTCAAGATAATTTCCGATGAGTGCATCAAACCCTCTTCCCCAACACCCCAACACCTGAGAACCCACAAGCTCTCCCTCTTGGACCAGTTCATTCCCTCCGTCTATGTACCCATGATCCTCTTCTTTCACCCCTCCTCCTCCATTCACCCCATTAATATTAATATAACTACTCCAACGAGGTCACAACTGCTAAAGCAATCCCTCTCAGAAACCTTGACTCACTTTCACCCACTTGCCGAGGCCGAGGTTGACTCCAATCTCTCCCAGTTTCTCAACCATCCTGATCTCTCCTTCATCAGTCAGTTCCTTCCCGGTGAGGCTAGTTGGCACGAAGCAGCTCCCGGAGCTCAGGTAGCTATGATGCAAATCACCAACTTTGCATGCGGCGGTTTCGTTCTGGGTGCCTTTATCTCACAAATGGTTGTTGATGGAACCGCATTGAGCGCCTTCCTCAAAGCTTGGGCTGCCGCAACATTTCGCTACATAGCGACTCCTTATACTCATTATATTTATACAAAGGGTAAGTTTGATGCACCATCTTTGTTTCCCCAAAATGATGCAAACCCAAGAGAAGCGATGATGGCTTTGTACTACTGCTTCCTGAAAGTGGGAAACTGTGTTACAAGGAGAATTGTATTTGATACTCCTGCTCTGGCCACACTCAAGAGAAAAGCAGCCAGCTCAAGGGTGCCAAATCCAACGCGTATGGAGGTTGTCACGGCACTCATCTGGAAGAACATTATGGATGCCCTTAACTTGAAGACCAAACCTAATATTGTTCAGAACCGGACATCTCTGATAACACACGCTGTGAATTTGCGTCGAAGAGCTGTGCCACCATTTTCCGAATACACTATGGGAAATTTTCTGTCCATGGCTGCCGTGCTGTCACAATGCAGTACTGAAGATCATTATCAAAAGGAGGACAACTTAGCTCATGTGGATGATGATCGTGATCATGAGTTGGGTAAGTTGGCGAAGCATGTGAGGGAAGCAATAAGCAAACTTGATGGTGATTTTGTACAAAGCCTACAAGGAGATGGGACTAGAGGGCTCACCAAATTCTGTGAGCCTTTCAAGGAGATAAGAGAGACTTTGTCTCGCACAAGTGCAGATGCAGCTGATGGACAGAGCCTGGATTATATAGGATTTAGGAGCTGGTGCAAATTTGGTCTTTATGAAGTTGATTTTGGGTGGGGAAAGCCGTCGTGGGTGTCATGTGTTGGAGGAAAGAGGGGTGCAGAAGAGCCTGTGTGCATGAATATGGTGGTTTTAATGGATACAAGGTCGGGGCATGGAGTTGAAGCCTGGATTTATCTAGATGAGCAAGACATGGCTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

455

Amino Acids

50.73

Weight (kDa)

6.57

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 86 1.3e-12 Transferase family
Transferase PF02458 87 - 453 3.8e-44 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 11
AccB1I GGYRCC 2 cut(s) 422, 709
AccII CGCG 1 cut(s) 724
AciI CCGC 4 cut(s) 405, 408, 456, 489
AclWI GGATC 1 cut(s) 130
AcoI YGGCCR 1 cut(s) 675
AcsI RAATTY 4 cut(s) 835, 883, 1082, 1187
AcuI CTGAAG 1 cut(s) 945
AcyI GRCGYC 1 cut(s) 8
AdeI CACNNNGTG 1 cut(s) 832
AfaI GTAC 4 cut(s) 129, 611, 922, 1044
AfiI CCNNNNNNNGG 2 cut(s) 628, 705
AflIII ACRYGT 1 cut(s) 722
AgsI TTSAA 3 cut(s) 781, 1099, 1325
AjnI CCWGG 2 cut(s) 1155, 1328
AjuI GAANNNNNNNTTGG 2 cut(s) 1194, 1226
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 2 cut(s) 1106, 1125
AlwI GGATC 1 cut(s) 130
AlwNI CAGNNNCTG 1 cut(s) 1156
AoxI GGCC 2 cut(s) 261, 675
ApeKI GCWGC 5 cut(s) 356, 485, 695, 899, 1139
ApoI RAATTY 4 cut(s) 835, 883, 1082, 1187
AseI ATTAAT 2 cut(s) 174, 180
AspLEI GCGC 1 cut(s) 467
AspS9I GGNCC 1 cut(s) 103
AsuC2I CCSGG 2 cut(s) 333, 363
AsuHPI GGTGA 7 cut(s) 140, 158, 239, 347, 382, 1046, 1069
AvaII GGWCC 1 cut(s) 103
BalI TGGCCA 1 cut(s) 677
BanI GGYRCC 2 cut(s) 422, 709
BanII GRGCYC 2 cut(s) 370, 1077
BarI GAAGNNNNNNTAC 2 cut(s) 602, 634
BbsI GAAGAC 1 cut(s) 788
Bbv12I GWGCWC 1 cut(s) 370
BbvI GCAGC 5 cut(s) 368, 472, 707, 886, 1151
BccI CCATC 7 cut(s) 306, 443, 565, 595, 1025, 1055, 1139
BceAI ACGGC 3 cut(s) 756, 887, 1210
BciT130I CCWGG 2 cut(s) 1157, 1330
BciVI GTATCC 1 cut(s) 1294
BclI TGATCA 1 cut(s) 976
BcnI CCSGG 2 cut(s) 333, 363
BcoDI GTCTC 2 cut(s) 1106, 1125
BfaI CTAG 3 cut(s) 342, 1068, 1340
BfoI RGCGCY 1 cut(s) 468
BfuI GTATCC 1 cut(s) 1294
BisI GCNGC 7 cut(s) 357, 406, 486, 489, 696, 900, 1140
BlsI GCNGC 7 cut(s) 358, 407, 487, 490, 697, 901, 1141
BmcAI AGTACT 1 cut(s) 922
Bme1390I CCNGG 4 cut(s) 333, 363, 1157, 1330
Bme18I GGWCC 1 cut(s) 103
BmgT120I GGNCC 1 cut(s) 103
BmiI GGNNCC 3 cut(s) 424, 454, 711
BmrFI CCNGG 4 cut(s) 333, 363, 1157, 1330
BmrI ACTGGG 1 cut(s) 280
BmsI GCATC 7 cut(s) 6, 54, 372, 541, 568, 757, 1126
BmuI ACTGGG 1 cut(s) 280
BpiI GAAGAC 1 cut(s) 788
BplI GAGNNNNNCTC 2 cut(s) 257, 289
Bpu10I CCTNAGC 1 cut(s) 369
BpuEI CTTGAG 2 cut(s) 668, 688
BpuMI CCSGG 2 cut(s) 333, 363
BsaBI GATNNNNATC 4 cut(s) 386, 933, 969, 975
BsaHI GRCGYC 1 cut(s) 8
BsaJI CCNNGG 3 cut(s) 258, 264, 894
BsaWI WCCGGW 1 cut(s) 807
BsaXI ACNNNNNCTCC 6 cut(s) 77, 107, 140, 170, 357, 387
Bsc4I CCNNNNNNNGG 2 cut(s) 628, 705
Bse1I ACTGG 2 cut(s) 106, 286
Bse8I GATNNNNATC 4 cut(s) 386, 933, 969, 975
BseBI CCWGG 2 cut(s) 1157, 1330
BseDI CCNNGG 3 cut(s) 258, 264, 894
BseGI GGATG 3 cut(s) 298, 772, 970
BseJI GATNNNNATC 4 cut(s) 386, 933, 969, 975
BseLI CCNNNNNNNGG 2 cut(s) 628, 705
BseMII CTCAG 3 cut(s) 68, 240, 383
BseNI ACTGG 2 cut(s) 106, 286
BseRI GAGGAG 2 cut(s) 145, 148
BseXI GCAGC 5 cut(s) 368, 472, 707, 886, 1151
BsgI GTGCAG 2 cut(s) 1152, 1281
Bsh1236I CGCG 1 cut(s) 724
BshFI GGCC 2 cut(s) 263, 677
BshNI GGYRCC 2 cut(s) 422, 709
BsiHKAI GWGCWC 1 cut(s) 370
BsiSI CCGG 3 cut(s) 333, 363, 808
BslFI GGGAC 1 cut(s) 1078
BslI CCNNNNNNNGG 2 cut(s) 628, 705
BsmAI GTCTC 2 cut(s) 1106, 1125
BsmFI GGGAC 1 cut(s) 1078
BsnI GGCC 2 cut(s) 263, 677
Bsp1286I GDGCHC 2 cut(s) 370, 1077
Bsp1407I TGTACA 1 cut(s) 1042
Bsp143I GATC 5 cut(s) 135, 304, 928, 970, 976
Bsp19I CCATGG 1 cut(s) 894
BspACI CCGC 4 cut(s) 405, 408, 456, 489
BspANI GGCC 2 cut(s) 263, 677
BspCNI CTCAG 3 cut(s) 69, 239, 382
BspFNI CGCG 1 cut(s) 724
BspHI TCATGA 1 cut(s) 979
BspLI GGNNCC 3 cut(s) 424, 454, 711
BspPI GGATC 1 cut(s) 130
BspQI GCTCTTC 2 cut(s) 841, 1260
BspT107I GGYRCC 2 cut(s) 422, 709
BsrGI TGTACA 1 cut(s) 1042
BsrI ACTGG 2 cut(s) 106, 286
BssECI CCNNGG 3 cut(s) 258, 264, 894
BssMI GATC 5 cut(s) 135, 304, 928, 970, 976
BssNI GRCGYC 1 cut(s) 8
BssT1I CCWWGG 1 cut(s) 894
Bst2UI CCWGG 2 cut(s) 1157, 1330
Bst4CI ACNGT 1 cut(s) 638
Bst6I CTCTTC 4 cut(s) 61, 146, 841, 1260
BstACI GRCGYC 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 1042
BstC8I GCNNGC 2 cut(s) 403, 700
BstDEI CTNAG 4 cut(s) 77, 226, 369, 952
BstDSI CCRYGG 1 cut(s) 894
BstF5I GGATG 3 cut(s) 298, 772, 970
BstFNI CGCG 1 cut(s) 724
BstH2I RGCGCY 1 cut(s) 468
BstHHI GCGC 1 cut(s) 467
BstKTI GATC 5 cut(s) 138, 307, 931, 973, 979
BstMAI GTCTC 2 cut(s) 1106, 1125
BstMBI GATC 5 cut(s) 135, 304, 928, 970, 976
BstMWI GCNNNNNNNGC 6 cut(s) 365, 374, 464, 485, 602, 1139
BstNI CCWGG 2 cut(s) 1157, 1330
BstNSI RCATGY 2 cut(s) 405, 1007
BstSCI CCNGG 4 cut(s) 331, 361, 1155, 1328
BstUI CGCG 1 cut(s) 724
BstV1I GCAGC 5 cut(s) 368, 472, 707, 886, 1151
BstV2I GAAGAC 1 cut(s) 788
BsuI GTATCC 1 cut(s) 1294
BsuRI GGCC 2 cut(s) 263, 677
BtgI CCRYGG 1 cut(s) 894
BtgZI GCGATG 1 cut(s) 611
BtsCI GGATG 3 cut(s) 298, 772, 970
Cac8I GCNNGC 2 cut(s) 403, 700
CaiI CAGNNNCTG 1 cut(s) 1156
CciI TCATGA 1 cut(s) 979
CfoI GCGC 1 cut(s) 467
Cfr13I GGNCC 1 cut(s) 103
CseI GACGC 1 cut(s) 830
Csp6I GTAC 4 cut(s) 128, 610, 921, 1043
CviQI GTAC 4 cut(s) 128, 610, 921, 1043
DdeI CTNAG 4 cut(s) 77, 226, 369, 952
DpnI GATC 5 cut(s) 137, 306, 930, 972, 978
DpnII GATC 5 cut(s) 135, 304, 928, 970, 976
DraIII CACNNNGTG 1 cut(s) 832
EaeI YGGCCR 1 cut(s) 675
Eam1104I CTCTTC 4 cut(s) 61, 146, 841, 1260
EarI CTCTTC 4 cut(s) 61, 146, 841, 1260
Ecl136II GAGCTC 1 cut(s) 368
Eco130I CCWWGG 1 cut(s) 894
Eco24I GRGCYC 2 cut(s) 370, 1077
Eco47I GGWCC 1 cut(s) 103
Eco53kI GAGCTC 1 cut(s) 368
Eco57I CTGAAG 1 cut(s) 945
EcoICRI GAGCTC 1 cut(s) 368
EcoRII CCWGG 2 cut(s) 1155, 1328
EcoT14I CCWWGG 1 cut(s) 894
EcoT38I GRGCYC 2 cut(s) 370, 1077
ErhI CCWWGG 1 cut(s) 894
FalI AAGNNNNNCTT 2 cut(s) 1099, 1131
FaqI GGGAC 1 cut(s) 1078
FbaI TGATCA 1 cut(s) 976
Fnu4HI GCNGC 7 cut(s) 357, 406, 486, 489, 696, 900, 1140
FokI GGATG 3 cut(s) 285, 779, 977
FriOI GRGCYC 2 cut(s) 370, 1077
Fsp4HI GCNGC 7 cut(s) 357, 406, 486, 489, 696, 900, 1140
FspBI CTAG 3 cut(s) 342, 1068, 1340
GlaI GCGC 1 cut(s) 466
GluI GCNGC 7 cut(s) 357, 406, 486, 489, 696, 900, 1140
HaeII RGCGCY 1 cut(s) 468
HaeIII GGCC 2 cut(s) 263, 677
HapII CCGG 3 cut(s) 333, 363, 808
HgaI GACGC 1 cut(s) 830
HhaI GCGC 1 cut(s) 467
Hin1I GRCGYC 1 cut(s) 8
Hin6I GCGC 1 cut(s) 465
HinP1I GCGC 1 cut(s) 465
HincII GTYRAC 2 cut(s) 6, 271
HindII GTYRAC 2 cut(s) 6, 271
HindIII AAGCTT 1 cut(s) 477
HinfI GANTC 3 cut(s) 238, 272, 511
HpaII CCGG 3 cut(s) 333, 363, 808
HphI GGTGA 7 cut(s) 140, 158, 239, 347, 382, 1046, 1069
Hpy166II GTNNAC 2 cut(s) 6, 271
Hpy188I TCNGA 5 cut(s) 37, 229, 804, 819, 868
Hpy188III TCNNGA 8 cut(s) 25, 302, 622, 685, 751, 974, 980, 1340
Hpy8I GTNNAC 2 cut(s) 6, 271
Hpy99I CGWCG 2 cut(s) 846, 1231
HpyAV CCTTC 3 cut(s) 322, 338, 478
HpyCH4III ACNGT 1 cut(s) 638
HpyCH4IV ACGT 1 cut(s) 8
HpyF10VI GCNNNNNNNGC 6 cut(s) 365, 374, 464, 485, 602, 1139
HpyF3I CTNAG 4 cut(s) 77, 226, 369, 952
HpySE526I ACGT 1 cut(s) 8
Hsp92I GRCGYC 1 cut(s) 8
HspAI GCGC 1 cut(s) 465
Ksp22I TGATCA 1 cut(s) 976
Kzo9I GATC 5 cut(s) 135, 304, 928, 970, 976
LguI GCTCTTC 2 cut(s) 841, 1260
LmnI GCTCC 3 cut(s) 364, 365, 1176
Lsp1109I GCAGC 5 cut(s) 368, 472, 707, 886, 1151
LweI GCATC 7 cut(s) 6, 54, 372, 541, 568, 757, 1126
MaeI CTAG 3 cut(s) 342, 1068, 1340
MaeII ACGT 1 cut(s) 8
MaeIII GTNAC 4 cut(s) 201, 640, 736, 909
MalI GATC 5 cut(s) 137, 306, 930, 972, 978
MboI GATC 5 cut(s) 135, 304, 928, 970, 976
MboII GAAGA 7 cut(s) 48, 133, 766, 793, 858, 938, 1277
MhlI GDGCHC 2 cut(s) 370, 1077
MlsI TGGCCA 1 cut(s) 677
MluCI AATT 6 cut(s) 30, 651, 835, 883, 1082, 1187
MluI ACGCGT 1 cut(s) 722
MluNI TGGCCA 1 cut(s) 677
MlyI GAGTC 3 cut(s) 232, 266, 505
MmeI TCCRAC 3 cut(s) 218, 743, 1225
Mox20I TGGCCA 1 cut(s) 677
MscI TGGCCA 1 cut(s) 677
MseI TTAA 4 cut(s) 174, 180, 774, 1295
MslI CAYNNNNRTG 2 cut(s) 963, 1283
Msp20I TGGCCA 1 cut(s) 677
MspA1I CMGCKG 1 cut(s) 1142
MspI CCGG 3 cut(s) 333, 363, 808
MspR9I CCNGG 4 cut(s) 333, 363, 1157, 1330
MvaI CCWGG 2 cut(s) 1157, 1330
MvnI CGCG 1 cut(s) 724
MwoI GCNNNNNNNGC 6 cut(s) 365, 374, 464, 485, 602, 1139
NciI CCSGG 2 cut(s) 333, 363
NcoI CCATGG 1 cut(s) 894
NdeII GATC 5 cut(s) 135, 304, 928, 970, 976
NlaIV GGNNCC 3 cut(s) 424, 454, 711
NmeAIII GCCGAG 2 cut(s) 283, 289
NmuCI GTSAC 3 cut(s) 201, 736, 909
NspI RCATGY 2 cut(s) 405, 1007
PaeI GCATGC 1 cut(s) 405
PagI TCATGA 1 cut(s) 979
PciSI GCTCTTC 2 cut(s) 841, 1260
PflFI GACNNNGTC 1 cut(s) 1117
PfoI TCCNGGA 1 cut(s) 361
PkrI GCNGC 7 cut(s) 358, 407, 487, 490, 697, 901, 1141
PleI GAGTC 3 cut(s) 232, 266, 505
PpsI GAGTC 3 cut(s) 232, 266, 505
PshBI ATTAAT 2 cut(s) 174, 180
Psp124BI GAGCTC 1 cut(s) 370
Psp6I CCWGG 2 cut(s) 1155, 1328
PspGI CCWGG 2 cut(s) 1155, 1328
PspN4I GGNNCC 3 cut(s) 424, 454, 711
PspPI GGNCC 1 cut(s) 103
PstNI CAGNNNCTG 1 cut(s) 1156
PsyI GACNNNGTC 1 cut(s) 1117
PvuII CAGCTG 1 cut(s) 1142
RsaI GTAC 4 cut(s) 129, 611, 922, 1044
RsaNI GTAC 4 cut(s) 128, 610, 921, 1043
RseI CAYNNNNRTG 2 cut(s) 963, 1283
SacI GAGCTC 1 cut(s) 370
SapI GCTCTTC 2 cut(s) 841, 1260
SaqAI TTAA 4 cut(s) 174, 180, 774, 1295
SatI GCNGC 7 cut(s) 357, 406, 486, 489, 696, 900, 1140
Sau3AI GATC 5 cut(s) 135, 304, 928, 970, 976
Sau96I GGNCC 1 cut(s) 103
ScaI AGTACT 1 cut(s) 922
SchI GAGTC 3 cut(s) 232, 266, 505
ScrFI CCNGG 4 cut(s) 333, 363, 1157, 1330
SduI GDGCHC 2 cut(s) 370, 1077
SfaNI GCATC 7 cut(s) 6, 54, 372, 541, 568, 757, 1126
SinI GGWCC 1 cut(s) 103
SmiMI CAYNNNNRTG 2 cut(s) 963, 1283
SmlI CTYRAG 2 cut(s) 683, 703
SmoI CTYRAG 2 cut(s) 683, 703
SphI GCATGC 1 cut(s) 405
Sse9I AATT 6 cut(s) 30, 651, 835, 883, 1082, 1187
SsiI CCGC 4 cut(s) 405, 408, 456, 489
SspI AATATT 2 cut(s) 178, 796
SspMI CTAG 3 cut(s) 342, 1068, 1340
SstI GAGCTC 1 cut(s) 370
StyD4I CCNGG 4 cut(s) 331, 361, 1155, 1328
StyI CCWWGG 1 cut(s) 894
TaaI ACNGT 1 cut(s) 638
TaiI ACGT 1 cut(s) 11
TaqI TCGA 1 cut(s) 844
TasI AATT 6 cut(s) 30, 651, 835, 883, 1082, 1187
TatI WGTACW 3 cut(s) 609, 920, 1042
TauI GCSGC 2 cut(s) 408, 491
Tru1I TTAA 4 cut(s) 174, 180, 774, 1295
Tru9I TTAA 4 cut(s) 174, 180, 774, 1295
TseFI GTSAC 3 cut(s) 201, 736, 909
TseI GCWGC 5 cut(s) 356, 485, 695, 899, 1139
Tsp45I GTSAC 3 cut(s) 201, 736, 909
TspDTI ATGAA 4 cut(s) 100, 304, 1215, 1295
TspGWI ACGGA 1 cut(s) 109
Tth111I GACNNNGTC 1 cut(s) 1117
VpaK11BI GGWCC 1 cut(s) 103
VspI ATTAAT 2 cut(s) 174, 180
XapI RAATTY 4 cut(s) 835, 883, 1082, 1187
XbaI TCTAGA 1 cut(s) 1339
XceI RCATGY 2 cut(s) 405, 1007
XspI CTAG 3 cut(s) 342, 1068, 1340
ZraI GACGTC 1 cut(s) 9
ZrmI AGTACT 1 cut(s) 922
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.