Encoded by
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g37470 FvH4_2g37480 FvH4_2g37490 FvH4_2g37491 FvH4_2g37500 |
| malus_domestica | MD15G1002200.v1.1 |
| pyrus_communis | pycom15g00110 |
| rosa_chinensis | RchiOBHm_Chr6g0304241 RchiOBHm_Chr6g0304251 |
| rosa_laevigata | RLG00000010998 RLG00000010999 RLG00000011001 RLG00000011002 RLG00000011003 |
| rosa_multiflora | Rmu_ssc0000218.1_g000016 Rmu_ssc0000218.1_g000018 Rmu_ssc0000218.1_g000021 |
| rosa_roxburghii | Rroxscaffold_7G00163920 Rroxscaffold_7G00163940 |
| rosa_rugosa | Rorug06G0329000 Rorug06G0329100 |
| rosa_samantha | Rh6BG459700 Rh6BG459800 Rh6CG455300 Rh6CG455400 Rh6DG442300 |
| rosa_wichuraiana | Rw6G038400 Rw6G038410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 11 |
| AccB1I | GGYRCC | 2 cut(s) | 422, 709 |
| AccII | CGCG | 1 cut(s) | 724 |
| AciI | CCGC | 4 cut(s) | 405, 408, 456, 489 |
| AclWI | GGATC | 1 cut(s) | 130 |
| AcoI | YGGCCR | 1 cut(s) | 675 |
| AcsI | RAATTY | 4 cut(s) | 835, 883, 1082, 1187 |
| AcuI | CTGAAG | 1 cut(s) | 945 |
| AcyI | GRCGYC | 1 cut(s) | 8 |
| AdeI | CACNNNGTG | 1 cut(s) | 832 |
| AfaI | GTAC | 4 cut(s) | 129, 611, 922, 1044 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 628, 705 |
| AflIII | ACRYGT | 1 cut(s) | 722 |
| AgsI | TTSAA | 3 cut(s) | 781, 1099, 1325 |
| AjnI | CCWGG | 2 cut(s) | 1155, 1328 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1194, 1226 |
| Alw21I | GWGCWC | 1 cut(s) | 370 |
| Alw26I | GTCTC | 2 cut(s) | 1106, 1125 |
| AlwI | GGATC | 1 cut(s) | 130 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1156 |
| AoxI | GGCC | 2 cut(s) | 261, 675 |
| ApeKI | GCWGC | 5 cut(s) | 356, 485, 695, 899, 1139 |
| ApoI | RAATTY | 4 cut(s) | 835, 883, 1082, 1187 |
| AseI | ATTAAT | 2 cut(s) | 174, 180 |
| AspLEI | GCGC | 1 cut(s) | 467 |
| AspS9I | GGNCC | 1 cut(s) | 103 |
| AsuC2I | CCSGG | 2 cut(s) | 333, 363 |
| AsuHPI | GGTGA | 7 cut(s) | 140, 158, 239, 347, 382, 1046, 1069 |
| AvaII | GGWCC | 1 cut(s) | 103 |
| BalI | TGGCCA | 1 cut(s) | 677 |
| BanI | GGYRCC | 2 cut(s) | 422, 709 |
| BanII | GRGCYC | 2 cut(s) | 370, 1077 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 602, 634 |
| BbsI | GAAGAC | 1 cut(s) | 788 |
| Bbv12I | GWGCWC | 1 cut(s) | 370 |
| BbvI | GCAGC | 5 cut(s) | 368, 472, 707, 886, 1151 |
| BccI | CCATC | 7 cut(s) | 306, 443, 565, 595, 1025, 1055, 1139 |
| BceAI | ACGGC | 3 cut(s) | 756, 887, 1210 |
| BciT130I | CCWGG | 2 cut(s) | 1157, 1330 |
| BciVI | GTATCC | 1 cut(s) | 1294 |
| BclI | TGATCA | 1 cut(s) | 976 |
| BcnI | CCSGG | 2 cut(s) | 333, 363 |
| BcoDI | GTCTC | 2 cut(s) | 1106, 1125 |
| BfaI | CTAG | 3 cut(s) | 342, 1068, 1340 |
| BfoI | RGCGCY | 1 cut(s) | 468 |
| BfuI | GTATCC | 1 cut(s) | 1294 |
| BisI | GCNGC | 7 cut(s) | 357, 406, 486, 489, 696, 900, 1140 |
| BlsI | GCNGC | 7 cut(s) | 358, 407, 487, 490, 697, 901, 1141 |
| BmcAI | AGTACT | 1 cut(s) | 922 |
| Bme1390I | CCNGG | 4 cut(s) | 333, 363, 1157, 1330 |
| Bme18I | GGWCC | 1 cut(s) | 103 |
| BmgT120I | GGNCC | 1 cut(s) | 103 |
| BmiI | GGNNCC | 3 cut(s) | 424, 454, 711 |
| BmrFI | CCNGG | 4 cut(s) | 333, 363, 1157, 1330 |
| BmrI | ACTGGG | 1 cut(s) | 280 |
| BmsI | GCATC | 7 cut(s) | 6, 54, 372, 541, 568, 757, 1126 |
| BmuI | ACTGGG | 1 cut(s) | 280 |
| BpiI | GAAGAC | 1 cut(s) | 788 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 257, 289 |
| Bpu10I | CCTNAGC | 1 cut(s) | 369 |
| BpuEI | CTTGAG | 2 cut(s) | 668, 688 |
| BpuMI | CCSGG | 2 cut(s) | 333, 363 |
| BsaBI | GATNNNNATC | 4 cut(s) | 386, 933, 969, 975 |
| BsaHI | GRCGYC | 1 cut(s) | 8 |
| BsaJI | CCNNGG | 3 cut(s) | 258, 264, 894 |
| BsaWI | WCCGGW | 1 cut(s) | 807 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 77, 107, 140, 170, 357, 387 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 628, 705 |
| Bse1I | ACTGG | 2 cut(s) | 106, 286 |
| Bse8I | GATNNNNATC | 4 cut(s) | 386, 933, 969, 975 |
| BseBI | CCWGG | 2 cut(s) | 1157, 1330 |
| BseDI | CCNNGG | 3 cut(s) | 258, 264, 894 |
| BseGI | GGATG | 3 cut(s) | 298, 772, 970 |
| BseJI | GATNNNNATC | 4 cut(s) | 386, 933, 969, 975 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 628, 705 |
| BseMII | CTCAG | 3 cut(s) | 68, 240, 383 |
| BseNI | ACTGG | 2 cut(s) | 106, 286 |
| BseRI | GAGGAG | 2 cut(s) | 145, 148 |
| BseXI | GCAGC | 5 cut(s) | 368, 472, 707, 886, 1151 |
| BsgI | GTGCAG | 2 cut(s) | 1152, 1281 |
| Bsh1236I | CGCG | 1 cut(s) | 724 |
| BshFI | GGCC | 2 cut(s) | 263, 677 |
| BshNI | GGYRCC | 2 cut(s) | 422, 709 |
| BsiHKAI | GWGCWC | 1 cut(s) | 370 |
| BsiSI | CCGG | 3 cut(s) | 333, 363, 808 |
| BslFI | GGGAC | 1 cut(s) | 1078 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 628, 705 |
| BsmAI | GTCTC | 2 cut(s) | 1106, 1125 |
| BsmFI | GGGAC | 1 cut(s) | 1078 |
| BsnI | GGCC | 2 cut(s) | 263, 677 |
| Bsp1286I | GDGCHC | 2 cut(s) | 370, 1077 |
| Bsp1407I | TGTACA | 1 cut(s) | 1042 |
| Bsp143I | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| Bsp19I | CCATGG | 1 cut(s) | 894 |
| BspACI | CCGC | 4 cut(s) | 405, 408, 456, 489 |
| BspANI | GGCC | 2 cut(s) | 263, 677 |
| BspCNI | CTCAG | 3 cut(s) | 69, 239, 382 |
| BspFNI | CGCG | 1 cut(s) | 724 |
| BspHI | TCATGA | 1 cut(s) | 979 |
| BspLI | GGNNCC | 3 cut(s) | 424, 454, 711 |
| BspPI | GGATC | 1 cut(s) | 130 |
| BspQI | GCTCTTC | 2 cut(s) | 841, 1260 |
| BspT107I | GGYRCC | 2 cut(s) | 422, 709 |
| BsrGI | TGTACA | 1 cut(s) | 1042 |
| BsrI | ACTGG | 2 cut(s) | 106, 286 |
| BssECI | CCNNGG | 3 cut(s) | 258, 264, 894 |
| BssMI | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| BssNI | GRCGYC | 1 cut(s) | 8 |
| BssT1I | CCWWGG | 1 cut(s) | 894 |
| Bst2UI | CCWGG | 2 cut(s) | 1157, 1330 |
| Bst4CI | ACNGT | 1 cut(s) | 638 |
| Bst6I | CTCTTC | 4 cut(s) | 61, 146, 841, 1260 |
| BstACI | GRCGYC | 1 cut(s) | 8 |
| BstAUI | TGTACA | 1 cut(s) | 1042 |
| BstC8I | GCNNGC | 2 cut(s) | 403, 700 |
| BstDEI | CTNAG | 4 cut(s) | 77, 226, 369, 952 |
| BstDSI | CCRYGG | 1 cut(s) | 894 |
| BstF5I | GGATG | 3 cut(s) | 298, 772, 970 |
| BstFNI | CGCG | 1 cut(s) | 724 |
| BstH2I | RGCGCY | 1 cut(s) | 468 |
| BstHHI | GCGC | 1 cut(s) | 467 |
| BstKTI | GATC | 5 cut(s) | 138, 307, 931, 973, 979 |
| BstMAI | GTCTC | 2 cut(s) | 1106, 1125 |
| BstMBI | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 365, 374, 464, 485, 602, 1139 |
| BstNI | CCWGG | 2 cut(s) | 1157, 1330 |
| BstNSI | RCATGY | 2 cut(s) | 405, 1007 |
| BstSCI | CCNGG | 4 cut(s) | 331, 361, 1155, 1328 |
| BstUI | CGCG | 1 cut(s) | 724 |
| BstV1I | GCAGC | 5 cut(s) | 368, 472, 707, 886, 1151 |
| BstV2I | GAAGAC | 1 cut(s) | 788 |
| BsuI | GTATCC | 1 cut(s) | 1294 |
| BsuRI | GGCC | 2 cut(s) | 263, 677 |
| BtgI | CCRYGG | 1 cut(s) | 894 |
| BtgZI | GCGATG | 1 cut(s) | 611 |
| BtsCI | GGATG | 3 cut(s) | 298, 772, 970 |
| Cac8I | GCNNGC | 2 cut(s) | 403, 700 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1156 |
| CciI | TCATGA | 1 cut(s) | 979 |
| CfoI | GCGC | 1 cut(s) | 467 |
| Cfr13I | GGNCC | 1 cut(s) | 103 |
| CseI | GACGC | 1 cut(s) | 830 |
| Csp6I | GTAC | 4 cut(s) | 128, 610, 921, 1043 |
| CviQI | GTAC | 4 cut(s) | 128, 610, 921, 1043 |
| DdeI | CTNAG | 4 cut(s) | 77, 226, 369, 952 |
| DpnI | GATC | 5 cut(s) | 137, 306, 930, 972, 978 |
| DpnII | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| DraIII | CACNNNGTG | 1 cut(s) | 832 |
| EaeI | YGGCCR | 1 cut(s) | 675 |
| Eam1104I | CTCTTC | 4 cut(s) | 61, 146, 841, 1260 |
| EarI | CTCTTC | 4 cut(s) | 61, 146, 841, 1260 |
| Ecl136II | GAGCTC | 1 cut(s) | 368 |
| Eco130I | CCWWGG | 1 cut(s) | 894 |
| Eco24I | GRGCYC | 2 cut(s) | 370, 1077 |
| Eco47I | GGWCC | 1 cut(s) | 103 |
| Eco53kI | GAGCTC | 1 cut(s) | 368 |
| Eco57I | CTGAAG | 1 cut(s) | 945 |
| EcoICRI | GAGCTC | 1 cut(s) | 368 |
| EcoRII | CCWGG | 2 cut(s) | 1155, 1328 |
| EcoT14I | CCWWGG | 1 cut(s) | 894 |
| EcoT38I | GRGCYC | 2 cut(s) | 370, 1077 |
| ErhI | CCWWGG | 1 cut(s) | 894 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1099, 1131 |
| FaqI | GGGAC | 1 cut(s) | 1078 |
| FbaI | TGATCA | 1 cut(s) | 976 |
| Fnu4HI | GCNGC | 7 cut(s) | 357, 406, 486, 489, 696, 900, 1140 |
| FokI | GGATG | 3 cut(s) | 285, 779, 977 |
| FriOI | GRGCYC | 2 cut(s) | 370, 1077 |
| Fsp4HI | GCNGC | 7 cut(s) | 357, 406, 486, 489, 696, 900, 1140 |
| FspBI | CTAG | 3 cut(s) | 342, 1068, 1340 |
| GlaI | GCGC | 1 cut(s) | 466 |
| GluI | GCNGC | 7 cut(s) | 357, 406, 486, 489, 696, 900, 1140 |
| HaeII | RGCGCY | 1 cut(s) | 468 |
| HaeIII | GGCC | 2 cut(s) | 263, 677 |
| HapII | CCGG | 3 cut(s) | 333, 363, 808 |
| HgaI | GACGC | 1 cut(s) | 830 |
| HhaI | GCGC | 1 cut(s) | 467 |
| Hin1I | GRCGYC | 1 cut(s) | 8 |
| Hin6I | GCGC | 1 cut(s) | 465 |
| HinP1I | GCGC | 1 cut(s) | 465 |
| HincII | GTYRAC | 2 cut(s) | 6, 271 |
| HindII | GTYRAC | 2 cut(s) | 6, 271 |
| HindIII | AAGCTT | 1 cut(s) | 477 |
| HinfI | GANTC | 3 cut(s) | 238, 272, 511 |
| HpaII | CCGG | 3 cut(s) | 333, 363, 808 |
| HphI | GGTGA | 7 cut(s) | 140, 158, 239, 347, 382, 1046, 1069 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 271 |
| Hpy188I | TCNGA | 5 cut(s) | 37, 229, 804, 819, 868 |
| Hpy188III | TCNNGA | 8 cut(s) | 25, 302, 622, 685, 751, 974, 980, 1340 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 271 |
| Hpy99I | CGWCG | 2 cut(s) | 846, 1231 |
| HpyAV | CCTTC | 3 cut(s) | 322, 338, 478 |
| HpyCH4III | ACNGT | 1 cut(s) | 638 |
| HpyCH4IV | ACGT | 1 cut(s) | 8 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 365, 374, 464, 485, 602, 1139 |
| HpyF3I | CTNAG | 4 cut(s) | 77, 226, 369, 952 |
| HpySE526I | ACGT | 1 cut(s) | 8 |
| Hsp92I | GRCGYC | 1 cut(s) | 8 |
| HspAI | GCGC | 1 cut(s) | 465 |
| Ksp22I | TGATCA | 1 cut(s) | 976 |
| Kzo9I | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| LguI | GCTCTTC | 2 cut(s) | 841, 1260 |
| LmnI | GCTCC | 3 cut(s) | 364, 365, 1176 |
| Lsp1109I | GCAGC | 5 cut(s) | 368, 472, 707, 886, 1151 |
| LweI | GCATC | 7 cut(s) | 6, 54, 372, 541, 568, 757, 1126 |
| MaeI | CTAG | 3 cut(s) | 342, 1068, 1340 |
| MaeII | ACGT | 1 cut(s) | 8 |
| MaeIII | GTNAC | 4 cut(s) | 201, 640, 736, 909 |
| MalI | GATC | 5 cut(s) | 137, 306, 930, 972, 978 |
| MboI | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| MboII | GAAGA | 7 cut(s) | 48, 133, 766, 793, 858, 938, 1277 |
| MhlI | GDGCHC | 2 cut(s) | 370, 1077 |
| MlsI | TGGCCA | 1 cut(s) | 677 |
| MluCI | AATT | 6 cut(s) | 30, 651, 835, 883, 1082, 1187 |
| MluI | ACGCGT | 1 cut(s) | 722 |
| MluNI | TGGCCA | 1 cut(s) | 677 |
| MlyI | GAGTC | 3 cut(s) | 232, 266, 505 |
| MmeI | TCCRAC | 3 cut(s) | 218, 743, 1225 |
| Mox20I | TGGCCA | 1 cut(s) | 677 |
| MscI | TGGCCA | 1 cut(s) | 677 |
| MseI | TTAA | 4 cut(s) | 174, 180, 774, 1295 |
| MslI | CAYNNNNRTG | 2 cut(s) | 963, 1283 |
| Msp20I | TGGCCA | 1 cut(s) | 677 |
| MspA1I | CMGCKG | 1 cut(s) | 1142 |
| MspI | CCGG | 3 cut(s) | 333, 363, 808 |
| MspR9I | CCNGG | 4 cut(s) | 333, 363, 1157, 1330 |
| MvaI | CCWGG | 2 cut(s) | 1157, 1330 |
| MvnI | CGCG | 1 cut(s) | 724 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 365, 374, 464, 485, 602, 1139 |
| NciI | CCSGG | 2 cut(s) | 333, 363 |
| NcoI | CCATGG | 1 cut(s) | 894 |
| NdeII | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| NlaIV | GGNNCC | 3 cut(s) | 424, 454, 711 |
| NmeAIII | GCCGAG | 2 cut(s) | 283, 289 |
| NmuCI | GTSAC | 3 cut(s) | 201, 736, 909 |
| NspI | RCATGY | 2 cut(s) | 405, 1007 |
| PaeI | GCATGC | 1 cut(s) | 405 |
| PagI | TCATGA | 1 cut(s) | 979 |
| PciSI | GCTCTTC | 2 cut(s) | 841, 1260 |
| PflFI | GACNNNGTC | 1 cut(s) | 1117 |
| PfoI | TCCNGGA | 1 cut(s) | 361 |
| PkrI | GCNGC | 7 cut(s) | 358, 407, 487, 490, 697, 901, 1141 |
| PleI | GAGTC | 3 cut(s) | 232, 266, 505 |
| PpsI | GAGTC | 3 cut(s) | 232, 266, 505 |
| PshBI | ATTAAT | 2 cut(s) | 174, 180 |
| Psp124BI | GAGCTC | 1 cut(s) | 370 |
| Psp6I | CCWGG | 2 cut(s) | 1155, 1328 |
| PspGI | CCWGG | 2 cut(s) | 1155, 1328 |
| PspN4I | GGNNCC | 3 cut(s) | 424, 454, 711 |
| PspPI | GGNCC | 1 cut(s) | 103 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1156 |
| PsyI | GACNNNGTC | 1 cut(s) | 1117 |
| PvuII | CAGCTG | 1 cut(s) | 1142 |
| RsaI | GTAC | 4 cut(s) | 129, 611, 922, 1044 |
| RsaNI | GTAC | 4 cut(s) | 128, 610, 921, 1043 |
| RseI | CAYNNNNRTG | 2 cut(s) | 963, 1283 |
| SacI | GAGCTC | 1 cut(s) | 370 |
| SapI | GCTCTTC | 2 cut(s) | 841, 1260 |
| SaqAI | TTAA | 4 cut(s) | 174, 180, 774, 1295 |
| SatI | GCNGC | 7 cut(s) | 357, 406, 486, 489, 696, 900, 1140 |
| Sau3AI | GATC | 5 cut(s) | 135, 304, 928, 970, 976 |
| Sau96I | GGNCC | 1 cut(s) | 103 |
| ScaI | AGTACT | 1 cut(s) | 922 |
| SchI | GAGTC | 3 cut(s) | 232, 266, 505 |
| ScrFI | CCNGG | 4 cut(s) | 333, 363, 1157, 1330 |
| SduI | GDGCHC | 2 cut(s) | 370, 1077 |
| SfaNI | GCATC | 7 cut(s) | 6, 54, 372, 541, 568, 757, 1126 |
| SinI | GGWCC | 1 cut(s) | 103 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 963, 1283 |
| SmlI | CTYRAG | 2 cut(s) | 683, 703 |
| SmoI | CTYRAG | 2 cut(s) | 683, 703 |
| SphI | GCATGC | 1 cut(s) | 405 |
| Sse9I | AATT | 6 cut(s) | 30, 651, 835, 883, 1082, 1187 |
| SsiI | CCGC | 4 cut(s) | 405, 408, 456, 489 |
| SspI | AATATT | 2 cut(s) | 178, 796 |
| SspMI | CTAG | 3 cut(s) | 342, 1068, 1340 |
| SstI | GAGCTC | 1 cut(s) | 370 |
| StyD4I | CCNGG | 4 cut(s) | 331, 361, 1155, 1328 |
| StyI | CCWWGG | 1 cut(s) | 894 |
| TaaI | ACNGT | 1 cut(s) | 638 |
| TaiI | ACGT | 1 cut(s) | 11 |
| TaqI | TCGA | 1 cut(s) | 844 |
| TasI | AATT | 6 cut(s) | 30, 651, 835, 883, 1082, 1187 |
| TatI | WGTACW | 3 cut(s) | 609, 920, 1042 |
| TauI | GCSGC | 2 cut(s) | 408, 491 |
| Tru1I | TTAA | 4 cut(s) | 174, 180, 774, 1295 |
| Tru9I | TTAA | 4 cut(s) | 174, 180, 774, 1295 |
| TseFI | GTSAC | 3 cut(s) | 201, 736, 909 |
| TseI | GCWGC | 5 cut(s) | 356, 485, 695, 899, 1139 |
| Tsp45I | GTSAC | 3 cut(s) | 201, 736, 909 |
| TspDTI | ATGAA | 4 cut(s) | 100, 304, 1215, 1295 |
| TspGWI | ACGGA | 1 cut(s) | 109 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1117 |
| VpaK11BI | GGWCC | 1 cut(s) | 103 |
| VspI | ATTAAT | 2 cut(s) | 174, 180 |
| XapI | RAATTY | 4 cut(s) | 835, 883, 1082, 1187 |
| XbaI | TCTAGA | 1 cut(s) | 1339 |
| XceI | RCATGY | 2 cut(s) | 405, 1007 |
| XspI | CTAG | 3 cut(s) | 342, 1068, 1340 |
| ZraI | GACGTC | 1 cut(s) | 9 |
| ZrmI | AGTACT | 1 cut(s) | 922 |